ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast79e09 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_469861.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2568 Score = 436 bits (220), Expect = e-119 Identities = 385/440 (87%) Strand = Plus / Plus Query: 1 tggcgccccgcgcgcgcgtggccacgtacaaggtgtgctgggtcggcggctgcttcagct 60 ||||||| | ||||||||| || ||||||||||| |||||||||||||| |||||||||| Sbjct: 734 tggcgccgcacgcgcgcgtcgcgacgtacaaggtttgctgggtcggcgggtgcttcagct 793 Query: 61 ccgacatcctcaagggcatggaggtcgccgtcgccgacggcgttgacgtgctctccctct 120 ||||||||||||||| ||||||||| || || ||||||||| ||||||||||| |||| Sbjct: 794 ccgacatcctcaaggccatggaggtggcggtgaacgacggcgtggacgtgctctcgctct 853 Query: 121 ccctcggcggtggcacgtctgactactaccgcgacagcatcgccgtgggcgcgtacagcg 180 | |||||||| ||||| | ||||||||||||||||||||||| |||||||| ||||||| Sbjct: 854 cgctcggcggcggcaccgcggactactaccgcgacagcatcgctgtgggcgcttacagcg 913 Query: 181 ccatggaaaaggggatttttgtctcctgctcggcggggaatgccggaccgggtgcggcgt 240 ||||||||| |||||| || || ||||||||||||||||| ||||| || || |||| Sbjct: 914 ccatggaaagggggatcttcgtgtcctgctcggcggggaacgccgggccaggctcggcca 973 Query: 241 cgctgacgaacggcgcgccttggatcaccaccgtgggcgcggggacgctcgaccgcgact 300 ||||| ||||||||||||| |||||||||||||| || || ||||| ||||||||||||| Sbjct: 974 cgctgtcgaacggcgcgccatggatcaccaccgtcggggccgggacactcgaccgcgact 1033 Query: 301 tccccgcctacgtcaccctcggcaacggtaacaaatacgacggcgtctccctctacagcg 360 |||||||| ||||| |||||||||||| || || ||| |||||||||||| ||||||| Sbjct: 1034 tccccgcccacgtcgtcctcggcaacggcaagaactactccggcgtctccctttacagcg 1093 Query: 361 gcaagcaattgcccaccacgccggtgccgttcatctacgcagggaacgcgtccaacagca 420 |||| || |||||||||||||||| || |||||||| || ||||||||||| ||||||| Sbjct: 1094 gcaaacagctgcccaccacgccggtcccattcatctatgccgggaacgcgtcgaacagca 1153 Query: 421 gcatgggcgcgctctgcatg 440 |||||||||||||||||||| Sbjct: 1154 gcatgggcgcgctctgcatg 1173
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 436 bits (220), Expect = e-119 Identities = 385/440 (87%) Strand = Plus / Minus Query: 1 tggcgccccgcgcgcgcgtggccacgtacaaggtgtgctgggtcggcggctgcttcagct 60 ||||||| | ||||||||| || ||||||||||| |||||||||||||| |||||||||| Sbjct: 31185937 tggcgccgcacgcgcgcgtcgcgacgtacaaggtttgctgggtcggcgggtgcttcagct 31185878 Query: 61 ccgacatcctcaagggcatggaggtcgccgtcgccgacggcgttgacgtgctctccctct 120 ||||||||||||||| ||||||||| || || ||||||||| ||||||||||| |||| Sbjct: 31185877 ccgacatcctcaaggccatggaggtggcggtgaacgacggcgtggacgtgctctcgctct 31185818 Query: 121 ccctcggcggtggcacgtctgactactaccgcgacagcatcgccgtgggcgcgtacagcg 180 | |||||||| ||||| | ||||||||||||||||||||||| |||||||| ||||||| Sbjct: 31185817 cgctcggcggcggcaccgcggactactaccgcgacagcatcgctgtgggcgcttacagcg 31185758 Query: 181 ccatggaaaaggggatttttgtctcctgctcggcggggaatgccggaccgggtgcggcgt 240 ||||||||| |||||| || || ||||||||||||||||| ||||| || || |||| Sbjct: 31185757 ccatggaaagggggatcttcgtgtcctgctcggcggggaacgccgggccaggctcggcca 31185698 Query: 241 cgctgacgaacggcgcgccttggatcaccaccgtgggcgcggggacgctcgaccgcgact 300 ||||| ||||||||||||| |||||||||||||| || || ||||| ||||||||||||| Sbjct: 31185697 cgctgtcgaacggcgcgccatggatcaccaccgtcggggccgggacactcgaccgcgact 31185638 Query: 301 tccccgcctacgtcaccctcggcaacggtaacaaatacgacggcgtctccctctacagcg 360 |||||||| ||||| |||||||||||| || || ||| |||||||||||| ||||||| Sbjct: 31185637 tccccgcccacgtcgtcctcggcaacggcaagaactactccggcgtctccctttacagcg 31185578 Query: 361 gcaagcaattgcccaccacgccggtgccgttcatctacgcagggaacgcgtccaacagca 420 |||| || |||||||||||||||| || |||||||| || ||||||||||| ||||||| Sbjct: 31185577 gcaaacagctgcccaccacgccggtcccattcatctatgccgggaacgcgtcgaacagca 31185518 Query: 421 gcatgggcgcgctctgcatg 440 |||||||||||||||||||| Sbjct: 31185517 gcatgggcgcgctctgcatg 31185498 Score = 121 bits (61), Expect = 2e-24 Identities = 130/153 (84%) Strand = Plus / Plus Query: 204 tcctgctcggcggggaatgccggaccgggtgcggcgtcgctgacgaacggcgcgccttgg 263 |||||||| |||||||| ||||| || || || | ||||| |||||| ||||| ||| Sbjct: 22511820 tcctgctccgcggggaacgccgggcccggcacgtccacgctgtcgaacgtggcgccatgg 22511879 Query: 264 atcaccaccgtgggcgcggggacgctcgaccgcgacttccccgcctacgtcaccctcggc 323 ||||||||||||||||||||||||||||||||||||||||| || |||||| | || ||| Sbjct: 22511880 atcaccaccgtgggcgcggggacgctcgaccgcgacttcccggcgtacgtctcgcttggc 22511939 Query: 324 aacggtaacaaatacgacggcgtctccctctac 356 ||||| || || ||| |||||||||||||||| Sbjct: 22511940 aacggcaagaactacaccggcgtctccctctac 22511972 Score = 103 bits (52), Expect = 5e-19 Identities = 88/100 (88%) Strand = Plus / Plus Query: 1 tggcgccccgcgcgcgcgtggccacgtacaaggtgtgctgggtcggcggctgcttcagct 60 |||||||| | |||||||| ||| |||||||||||||||| |||||||||||||||||| Sbjct: 22511617 tggcgcccagggcgcgcgtcgccgtgtacaaggtgtgctggctcggcggctgcttcagct 22511676 Query: 61 ccgacatcctcaagggcatggaggtcgccgtcgccgacgg 100 ||||||||||| || ||||| | ||||||||||||||| Sbjct: 22511677 ccgacatcctcgccgggatggacgccgccgtcgccgacgg 22511716 Score = 87.7 bits (44), Expect = 3e-14 Identities = 89/104 (85%) Strand = Plus / Plus Query: 27 tacaaggtgtgctgggtcggcggctgcttcagctccgacatcctcaagggcatggaggtc 86 ||||||||||||||| || ||| |||| |||||||||||||||| ||| ||||| | | Sbjct: 2370301 tacaaggtgtgctggttcaacgggtgctacagctccgacatcctcgcggggatggacgac 2370360 Query: 87 gccgtcgccgacggcgttgacgtgctctccctctccctcggcgg 130 ||||| ||||||||| |||||||| ||||||||||||||||| Sbjct: 2370361 gccgtgcgcgacggcgtcgacgtgctgtccctctccctcggcgg 2370404 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 109 tgctctccctctccctcggcggtgg 133 ||||||| ||||||||||||||||| Sbjct: 12762923 tgctctctctctccctcggcggtgg 12762899 Score = 40.1 bits (20), Expect = 6.1 Identities = 32/36 (88%) Strand = Plus / Plus Query: 3 gcgccccgcgcgcgcgtggccacgtacaaggtgtgc 38 |||||| |||||| ||| |||| ||||||||||||| Sbjct: 17866041 gcgcccggcgcgcacgtcgccatgtacaaggtgtgc 17866076
>gb|AC084282.6| Oryza sativa chromosome 3 BAC OSJNBb0048A17 genomic sequence, complete sequence Length = 128017 Score = 436 bits (220), Expect = e-119 Identities = 385/440 (87%) Strand = Plus / Minus Query: 1 tggcgccccgcgcgcgcgtggccacgtacaaggtgtgctgggtcggcggctgcttcagct 60 ||||||| | ||||||||| || ||||||||||| |||||||||||||| |||||||||| Sbjct: 106578 tggcgccgcacgcgcgcgtcgcgacgtacaaggtttgctgggtcggcgggtgcttcagct 106519 Query: 61 ccgacatcctcaagggcatggaggtcgccgtcgccgacggcgttgacgtgctctccctct 120 ||||||||||||||| ||||||||| || || ||||||||| ||||||||||| |||| Sbjct: 106518 ccgacatcctcaaggccatggaggtggcggtgaacgacggcgtggacgtgctctcgctct 106459 Query: 121 ccctcggcggtggcacgtctgactactaccgcgacagcatcgccgtgggcgcgtacagcg 180 | |||||||| ||||| | ||||||||||||||||||||||| |||||||| ||||||| Sbjct: 106458 cgctcggcggcggcaccgcggactactaccgcgacagcatcgctgtgggcgcttacagcg 106399 Query: 181 ccatggaaaaggggatttttgtctcctgctcggcggggaatgccggaccgggtgcggcgt 240 ||||||||| |||||| || || ||||||||||||||||| ||||| || || |||| Sbjct: 106398 ccatggaaagggggatcttcgtgtcctgctcggcggggaacgccgggccaggctcggcca 106339 Query: 241 cgctgacgaacggcgcgccttggatcaccaccgtgggcgcggggacgctcgaccgcgact 300 ||||| ||||||||||||| |||||||||||||| || || ||||| ||||||||||||| Sbjct: 106338 cgctgtcgaacggcgcgccatggatcaccaccgtcggggccgggacactcgaccgcgact 106279 Query: 301 tccccgcctacgtcaccctcggcaacggtaacaaatacgacggcgtctccctctacagcg 360 |||||||| ||||| |||||||||||| || || ||| |||||||||||| ||||||| Sbjct: 106278 tccccgcccacgtcgtcctcggcaacggcaagaactactccggcgtctccctttacagcg 106219 Query: 361 gcaagcaattgcccaccacgccggtgccgttcatctacgcagggaacgcgtccaacagca 420 |||| || |||||||||||||||| || |||||||| || ||||||||||| ||||||| Sbjct: 106218 gcaaacagctgcccaccacgccggtcccattcatctatgccgggaacgcgtcgaacagca 106159 Query: 421 gcatgggcgcgctctgcatg 440 |||||||||||||||||||| Sbjct: 106158 gcatgggcgcgctctgcatg 106139
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 436 bits (220), Expect = e-119 Identities = 385/440 (87%) Strand = Plus / Minus Query: 1 tggcgccccgcgcgcgcgtggccacgtacaaggtgtgctgggtcggcggctgcttcagct 60 ||||||| | ||||||||| || ||||||||||| |||||||||||||| |||||||||| Sbjct: 31276460 tggcgccgcacgcgcgcgtcgcgacgtacaaggtttgctgggtcggcgggtgcttcagct 31276401 Query: 61 ccgacatcctcaagggcatggaggtcgccgtcgccgacggcgttgacgtgctctccctct 120 ||||||||||||||| ||||||||| || || ||||||||| ||||||||||| |||| Sbjct: 31276400 ccgacatcctcaaggccatggaggtggcggtgaacgacggcgtggacgtgctctcgctct 31276341 Query: 121 ccctcggcggtggcacgtctgactactaccgcgacagcatcgccgtgggcgcgtacagcg 180 | |||||||| ||||| | ||||||||||||||||||||||| |||||||| ||||||| Sbjct: 31276340 cgctcggcggcggcaccgcggactactaccgcgacagcatcgctgtgggcgcttacagcg 31276281 Query: 181 ccatggaaaaggggatttttgtctcctgctcggcggggaatgccggaccgggtgcggcgt 240 ||||||||| |||||| || || ||||||||||||||||| ||||| || || |||| Sbjct: 31276280 ccatggaaagggggatcttcgtgtcctgctcggcggggaacgccgggccaggctcggcca 31276221 Query: 241 cgctgacgaacggcgcgccttggatcaccaccgtgggcgcggggacgctcgaccgcgact 300 ||||| ||||||||||||| |||||||||||||| || || ||||| ||||||||||||| Sbjct: 31276220 cgctgtcgaacggcgcgccatggatcaccaccgtcggggccgggacactcgaccgcgact 31276161 Query: 301 tccccgcctacgtcaccctcggcaacggtaacaaatacgacggcgtctccctctacagcg 360 |||||||| ||||| |||||||||||| || || ||| |||||||||||| ||||||| Sbjct: 31276160 tccccgcccacgtcgtcctcggcaacggcaagaactactccggcgtctccctttacagcg 31276101 Query: 361 gcaagcaattgcccaccacgccggtgccgttcatctacgcagggaacgcgtccaacagca 420 |||| || |||||||||||||||| || |||||||| || ||||||||||| ||||||| Sbjct: 31276100 gcaaacagctgcccaccacgccggtcccattcatctatgccgggaacgcgtcgaacagca 31276041 Query: 421 gcatgggcgcgctctgcatg 440 |||||||||||||||||||| Sbjct: 31276040 gcatgggcgcgctctgcatg 31276021 Score = 121 bits (61), Expect = 2e-24 Identities = 130/153 (84%) Strand = Plus / Plus Query: 204 tcctgctcggcggggaatgccggaccgggtgcggcgtcgctgacgaacggcgcgccttgg 263 |||||||| |||||||| ||||| || || || | ||||| |||||| ||||| ||| Sbjct: 22504849 tcctgctccgcggggaacgccgggcccggcacgtccacgctgtcgaacgtggcgccatgg 22504908 Query: 264 atcaccaccgtgggcgcggggacgctcgaccgcgacttccccgcctacgtcaccctcggc 323 ||||||||||||||||||||||||||||||||||||||||| || |||||| | || ||| Sbjct: 22504909 atcaccaccgtgggcgcggggacgctcgaccgcgacttcccggcgtacgtctcgcttggc 22504968 Query: 324 aacggtaacaaatacgacggcgtctccctctac 356 ||||| || || ||| |||||||||||||||| Sbjct: 22504969 aacggcaagaactacaccggcgtctccctctac 22505001 Score = 103 bits (52), Expect = 5e-19 Identities = 88/100 (88%) Strand = Plus / Plus Query: 1 tggcgccccgcgcgcgcgtggccacgtacaaggtgtgctgggtcggcggctgcttcagct 60 |||||||| | |||||||| ||| |||||||||||||||| |||||||||||||||||| Sbjct: 22504646 tggcgcccagggcgcgcgtcgccgtgtacaaggtgtgctggctcggcggctgcttcagct 22504705 Query: 61 ccgacatcctcaagggcatggaggtcgccgtcgccgacgg 100 ||||||||||| || ||||| | ||||||||||||||| Sbjct: 22504706 ccgacatcctcgccgggatggacgccgccgtcgccgacgg 22504745 Score = 87.7 bits (44), Expect = 3e-14 Identities = 89/104 (85%) Strand = Plus / Plus Query: 27 tacaaggtgtgctgggtcggcggctgcttcagctccgacatcctcaagggcatggaggtc 86 ||||||||||||||| || ||| |||| |||||||||||||||| ||| ||||| | | Sbjct: 2370411 tacaaggtgtgctggttcaacgggtgctacagctccgacatcctcgcggggatggacgac 2370470 Query: 87 gccgtcgccgacggcgttgacgtgctctccctctccctcggcgg 130 ||||| ||||||||| |||||||| ||||||||||||||||| Sbjct: 2370471 gccgtgcgcgacggcgtcgacgtgctgtccctctccctcggcgg 2370514 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 109 tgctctccctctccctcggcggtgg 133 ||||||| ||||||||||||||||| Sbjct: 12759686 tgctctctctctccctcggcggtgg 12759662 Score = 40.1 bits (20), Expect = 6.1 Identities = 32/36 (88%) Strand = Plus / Plus Query: 3 gcgccccgcgcgcgcgtggccacgtacaaggtgtgc 38 |||||| |||||| ||| |||| ||||||||||||| Sbjct: 17859582 gcgcccggcgcgcacgtcgccatgtacaaggtgtgc 17859617
>dbj|AK103255.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033123P12, full insert sequence Length = 2813 Score = 436 bits (220), Expect = e-119 Identities = 385/440 (87%) Strand = Plus / Plus Query: 1 tggcgccccgcgcgcgcgtggccacgtacaaggtgtgctgggtcggcggctgcttcagct 60 ||||||| | ||||||||| || ||||||||||| |||||||||||||| |||||||||| Sbjct: 982 tggcgccgcacgcgcgcgtcgcgacgtacaaggtttgctgggtcggcgggtgcttcagct 1041 Query: 61 ccgacatcctcaagggcatggaggtcgccgtcgccgacggcgttgacgtgctctccctct 120 ||||||||||||||| ||||||||| || || ||||||||| ||||||||||| |||| Sbjct: 1042 ccgacatcctcaaggccatggaggtggcggtgaacgacggcgtggacgtgctctcgctct 1101 Query: 121 ccctcggcggtggcacgtctgactactaccgcgacagcatcgccgtgggcgcgtacagcg 180 | |||||||| ||||| | ||||||||||||||||||||||| |||||||| ||||||| Sbjct: 1102 cgctcggcggcggcaccgcggactactaccgcgacagcatcgctgtgggcgcttacagcg 1161 Query: 181 ccatggaaaaggggatttttgtctcctgctcggcggggaatgccggaccgggtgcggcgt 240 ||||||||| |||||| || || ||||||||||||||||| ||||| || || |||| Sbjct: 1162 ccatggaaagggggatcttcgtgtcctgctcggcggggaacgccgggccaggctcggcca 1221 Query: 241 cgctgacgaacggcgcgccttggatcaccaccgtgggcgcggggacgctcgaccgcgact 300 ||||| ||||||||||||| |||||||||||||| || || ||||| ||||||||||||| Sbjct: 1222 cgctgtcgaacggcgcgccatggatcaccaccgtcggggccgggacactcgaccgcgact 1281 Query: 301 tccccgcctacgtcaccctcggcaacggtaacaaatacgacggcgtctccctctacagcg 360 |||||||| ||||| |||||||||||| || || ||| |||||||||||| ||||||| Sbjct: 1282 tccccgcccacgtcgtcctcggcaacggcaagaactactccggcgtctccctttacagcg 1341 Query: 361 gcaagcaattgcccaccacgccggtgccgttcatctacgcagggaacgcgtccaacagca 420 |||| || |||||||||||||||| || |||||||| || ||||||||||| ||||||| Sbjct: 1342 gcaaacagctgcccaccacgccggtcccattcatctatgccgggaacgcgtcgaacagca 1401 Query: 421 gcatgggcgcgctctgcatg 440 |||||||||||||||||||| Sbjct: 1402 gcatgggcgcgctctgcatg 1421
>dbj|AK101646.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033055P14, full insert sequence Length = 2667 Score = 436 bits (220), Expect = e-119 Identities = 385/440 (87%) Strand = Plus / Plus Query: 1 tggcgccccgcgcgcgcgtggccacgtacaaggtgtgctgggtcggcggctgcttcagct 60 ||||||| | ||||||||| || ||||||||||| |||||||||||||| |||||||||| Sbjct: 787 tggcgccgcacgcgcgcgtcgcgacgtacaaggtttgctgggtcggcgggtgcttcagct 846 Query: 61 ccgacatcctcaagggcatggaggtcgccgtcgccgacggcgttgacgtgctctccctct 120 ||||||||||||||| ||||||||| || || ||||||||| ||||||||||| |||| Sbjct: 847 ccgacatcctcaaggccatggaggtggcggtgaacgacggcgtggacgtgctctcgctct 906 Query: 121 ccctcggcggtggcacgtctgactactaccgcgacagcatcgccgtgggcgcgtacagcg 180 | |||||||| ||||| | ||||||||||||||||||||||| |||||||| ||||||| Sbjct: 907 cgctcggcggcggcaccgcggactactaccgcgacagcatcgctgtgggcgcttacagcg 966 Query: 181 ccatggaaaaggggatttttgtctcctgctcggcggggaatgccggaccgggtgcggcgt 240 ||||||||| |||||| || || ||||||||||||||||| ||||| || || |||| Sbjct: 967 ccatggaaagggggatcttcgtgtcctgctcggcggggaacgccgggccaggctcggcca 1026 Query: 241 cgctgacgaacggcgcgccttggatcaccaccgtgggcgcggggacgctcgaccgcgact 300 ||||| ||||||||||||| |||||||||||||| || || ||||| ||||||||||||| Sbjct: 1027 cgctgtcgaacggcgcgccatggatcaccaccgtcggggccgggacactcgaccgcgact 1086 Query: 301 tccccgcctacgtcaccctcggcaacggtaacaaatacgacggcgtctccctctacagcg 360 |||||||| ||||| |||||||||||| || || ||| |||||||||||| ||||||| Sbjct: 1087 tccccgcccacgtcgtcctcggcaacggcaagaactactccggcgtctccctttacagcg 1146 Query: 361 gcaagcaattgcccaccacgccggtgccgttcatctacgcagggaacgcgtccaacagca 420 |||| || |||||||||||||||| || |||||||| || ||||||||||| ||||||| Sbjct: 1147 gcaaacagctgcccaccacgccggtcccattcatctatgccgggaacgcgtcgaacagca 1206 Query: 421 gcatgggcgcgctctgcatg 440 |||||||||||||||||||| Sbjct: 1207 gcatgggcgcgctctgcatg 1226
>gb|AC133860.5| Oryza sativa chromosome 3 BAC OSJNBa0091E13 genomic sequence, complete sequence Length = 157397 Score = 121 bits (61), Expect = 2e-24 Identities = 130/153 (84%) Strand = Plus / Minus Query: 204 tcctgctcggcggggaatgccggaccgggtgcggcgtcgctgacgaacggcgcgccttgg 263 |||||||| |||||||| ||||| || || || | ||||| |||||| ||||| ||| Sbjct: 156326 tcctgctccgcggggaacgccgggcccggcacgtccacgctgtcgaacgtggcgccatgg 156267 Query: 264 atcaccaccgtgggcgcggggacgctcgaccgcgacttccccgcctacgtcaccctcggc 323 ||||||||||||||||||||||||||||||||||||||||| || |||||| | || ||| Sbjct: 156266 atcaccaccgtgggcgcggggacgctcgaccgcgacttcccggcgtacgtctcgcttggc 156207 Query: 324 aacggtaacaaatacgacggcgtctccctctac 356 ||||| || || ||| |||||||||||||||| Sbjct: 156206 aacggcaagaactacaccggcgtctccctctac 156174 Score = 103 bits (52), Expect = 5e-19 Identities = 88/100 (88%) Strand = Plus / Minus Query: 1 tggcgccccgcgcgcgcgtggccacgtacaaggtgtgctgggtcggcggctgcttcagct 60 |||||||| | |||||||| ||| |||||||||||||||| |||||||||||||||||| Sbjct: 156529 tggcgcccagggcgcgcgtcgccgtgtacaaggtgtgctggctcggcggctgcttcagct 156470 Query: 61 ccgacatcctcaagggcatggaggtcgccgtcgccgacgg 100 ||||||||||| || ||||| | ||||||||||||||| Sbjct: 156469 ccgacatcctcgccgggatggacgccgccgtcgccgacgg 156430
>gb|AC109601.9| Oryza sativa chromosome 3 BAC OSJNBa0004G03 genomic sequence, complete sequence Length = 145590 Score = 121 bits (61), Expect = 2e-24 Identities = 130/153 (84%) Strand = Plus / Plus Query: 204 tcctgctcggcggggaatgccggaccgggtgcggcgtcgctgacgaacggcgcgccttgg 263 |||||||| |||||||| ||||| || || || | ||||| |||||| ||||| ||| Sbjct: 107067 tcctgctccgcggggaacgccgggcccggcacgtccacgctgtcgaacgtggcgccatgg 107126 Query: 264 atcaccaccgtgggcgcggggacgctcgaccgcgacttccccgcctacgtcaccctcggc 323 ||||||||||||||||||||||||||||||||||||||||| || |||||| | || ||| Sbjct: 107127 atcaccaccgtgggcgcggggacgctcgaccgcgacttcccggcgtacgtctcgcttggc 107186 Query: 324 aacggtaacaaatacgacggcgtctccctctac 356 ||||| || || ||| |||||||||||||||| Sbjct: 107187 aacggcaagaactacaccggcgtctccctctac 107219 Score = 103 bits (52), Expect = 5e-19 Identities = 88/100 (88%) Strand = Plus / Plus Query: 1 tggcgccccgcgcgcgcgtggccacgtacaaggtgtgctgggtcggcggctgcttcagct 60 |||||||| | |||||||| ||| |||||||||||||||| |||||||||||||||||| Sbjct: 106864 tggcgcccagggcgcgcgtcgccgtgtacaaggtgtgctggctcggcggctgcttcagct 106923 Query: 61 ccgacatcctcaagggcatggaggtcgccgtcgccgacgg 100 ||||||||||| || ||||| | ||||||||||||||| Sbjct: 106924 ccgacatcctcgccgggatggacgccgccgtcgccgacgg 106963
>dbj|AK105749.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-B09, full insert sequence Length = 2517 Score = 121 bits (61), Expect = 2e-24 Identities = 130/153 (84%) Strand = Plus / Plus Query: 204 tcctgctcggcggggaatgccggaccgggtgcggcgtcgctgacgaacggcgcgccttgg 263 |||||||| |||||||| ||||| || || || | ||||| |||||| ||||| ||| Sbjct: 953 tcctgctccgcggggaacgccgggcccggcacgtccacgctgtcgaacgtggcgccatgg 1012 Query: 264 atcaccaccgtgggcgcggggacgctcgaccgcgacttccccgcctacgtcaccctcggc 323 ||||||||||||||||||||||||||||||||||||||||| || |||||| | || ||| Sbjct: 1013 atcaccaccgtgggcgcggggacgctcgaccgcgacttcccggcgtacgtctcgcttggc 1072 Query: 324 aacggtaacaaatacgacggcgtctccctctac 356 ||||| || || ||| |||||||||||||||| Sbjct: 1073 aacggcaagaactacaccggcgtctccctctac 1105 Score = 103 bits (52), Expect = 5e-19 Identities = 88/100 (88%) Strand = Plus / Plus Query: 1 tggcgccccgcgcgcgcgtggccacgtacaaggtgtgctgggtcggcggctgcttcagct 60 |||||||| | |||||||| ||| |||||||||||||||| |||||||||||||||||| Sbjct: 750 tggcgcccagggcgcgcgtcgccgtgtacaaggtgtgctggctcggcggctgcttcagct 809 Query: 61 ccgacatcctcaagggcatggaggtcgccgtcgccgacgg 100 ||||||||||| || ||||| | ||||||||||||||| Sbjct: 810 ccgacatcctcgccgggatggacgccgccgtcgccgacgg 849
>gb|AC122149.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0083D24, complete sequence Length = 150503 Score = 87.7 bits (44), Expect = 3e-14 Identities = 89/104 (85%) Strand = Plus / Plus Query: 27 tacaaggtgtgctgggtcggcggctgcttcagctccgacatcctcaagggcatggaggtc 86 ||||||||||||||| || ||| |||| |||||||||||||||| ||| ||||| | | Sbjct: 87143 tacaaggtgtgctggttcaacgggtgctacagctccgacatcctcgcggggatggacgac 87202 Query: 87 gccgtcgccgacggcgttgacgtgctctccctctccctcggcgg 130 ||||| ||||||||| |||||||| ||||||||||||||||| Sbjct: 87203 gccgtgcgcgacggcgtcgacgtgctgtccctctccctcggcgg 87246
>gb|BT024067.1| Zea mays clone EL01N0448C11 mRNA sequence Length = 2351 Score = 77.8 bits (39), Expect = 3e-11 Identities = 114/139 (82%) Strand = Plus / Plus Query: 1 tggcgccccgcgcgcgcgtggccacgtacaaggtgtgctgggtcggcggctgcttcagct 60 ||||||||||||| ||||| || ||||||||||||||||| || ||||||||||||| Sbjct: 545 tggcgccccgcgcccgcgtcgcggcgtacaaggtgtgctggacggggggctgcttcagct 604 Query: 61 ccgacatcctcaagggcatggaggtcgccgtcgccgacggcgttgacgtgctctccctct 120 |||||||||| || | | || ||| || || |||||||| |||||||||||| ||| Sbjct: 605 ccgacatcctggcggccgtcgaccgcgcagtggcggacggcgtcgacgtgctctccatct 664 Query: 121 ccctcggcggtggcacgtc 139 | |||||||| ||| |||| Sbjct: 665 cgctcggcggcggctcgtc 683
>ref|XM_473575.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2331 Score = 75.8 bits (38), Expect = 1e-10 Identities = 110/134 (82%) Strand = Plus / Plus Query: 1 tggcgccccgcgcgcgcgtggccacgtacaaggtgtgctgggtcggcggctgcttcagct 60 ||||||||||||| ||||| || | |||||||||||||||| || || |||||||||| Sbjct: 761 tggcgccccgcgcccgcgtcgcggcctacaaggtgtgctgggcgggagggtgcttcagct 820 Query: 61 ccgacatcctcaagggcatggaggtcgccgtcgccgacggcgttgacgtgctctccctct 120 |||||||||| || | | || |||||| | |||||||| |||||||||||| ||| Sbjct: 821 ccgacatcctggcggccgtcgatcgcgccgtgtcggacggcgtcgacgtgctctccatct 880 Query: 121 ccctcggcggtggc 134 ||||||| |||||| Sbjct: 881 ccctcgggggtggc 894
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 75.8 bits (38), Expect = 1e-10 Identities = 110/134 (82%) Strand = Plus / Minus Query: 1 tggcgccccgcgcgcgcgtggccacgtacaaggtgtgctgggtcggcggctgcttcagct 60 ||||||||||||| ||||| || | |||||||||||||||| || || |||||||||| Sbjct: 28853822 tggcgccccgcgcccgcgtcgcggcctacaaggtgtgctgggcgggagggtgcttcagct 28853763 Query: 61 ccgacatcctcaagggcatggaggtcgccgtcgccgacggcgttgacgtgctctccctct 120 |||||||||| || | | || |||||| | |||||||| |||||||||||| ||| Sbjct: 28853762 ccgacatcctggcggccgtcgatcgcgccgtgtcggacggcgtcgacgtgctctccatct 28853703 Query: 121 ccctcggcggtggc 134 ||||||| |||||| Sbjct: 28853702 ccctcgggggtggc 28853689 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Plus Query: 249 aacggcgcgccttggatcaccaccgtgggcgcg 281 ||||||||||| |||||||||||||| |||||| Sbjct: 21368291 aacggcgcgccgtggatcaccaccgtcggcgcg 21368323 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 95 cgacggcgttgacgtgctctccctctcc 122 ||||||||| |||||||||||| ||||| Sbjct: 5563084 cgacggcgtcgacgtgctctccatctcc 5563057
>dbj|AK110251.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-162-H04, full insert sequence Length = 3493 Score = 75.8 bits (38), Expect = 1e-10 Identities = 110/134 (82%) Strand = Plus / Minus Query: 1 tggcgccccgcgcgcgcgtggccacgtacaaggtgtgctgggtcggcggctgcttcagct 60 ||||||||||||| ||||| || | |||||||||||||||| || || |||||||||| Sbjct: 2465 tggcgccccgcgcccgcgtcgcggcctacaaggtgtgctgggcgggagggtgcttcagct 2406 Query: 61 ccgacatcctcaagggcatggaggtcgccgtcgccgacggcgttgacgtgctctccctct 120 |||||||||| || | | || |||||| | |||||||| |||||||||||| ||| Sbjct: 2405 ccgacatcctggcggccgtcgatcgcgccgtgtcggacggcgtcgacgtgctctccatct 2346 Query: 121 ccctcggcggtggc 134 ||||||| |||||| Sbjct: 2345 ccctcgggggtggc 2332
>dbj|AK110034.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-160-B01, full insert sequence Length = 3486 Score = 75.8 bits (38), Expect = 1e-10 Identities = 110/134 (82%) Strand = Plus / Minus Query: 1 tggcgccccgcgcgcgcgtggccacgtacaaggtgtgctgggtcggcggctgcttcagct 60 ||||||||||||| ||||| || | |||||||||||||||| || || |||||||||| Sbjct: 1722 tggcgccccgcgcccgcgtcgcggcctacaaggtgtgctgggcgggagggtgcttcagct 1663 Query: 61 ccgacatcctcaagggcatggaggtcgccgtcgccgacggcgttgacgtgctctccctct 120 |||||||||| || | | || |||||| | |||||||| |||||||||||| ||| Sbjct: 1662 ccgacatcctggcggccgtcgatcgcgccgtgtcggacggcgtcgacgtgctctccatct 1603 Query: 121 ccctcggcggtggc 134 ||||||| |||||| Sbjct: 1602 ccctcgggggtggc 1589
>emb|AL606640.4|OSJN00071 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0019K04, complete sequence Length = 154865 Score = 75.8 bits (38), Expect = 1e-10 Identities = 110/134 (82%) Strand = Plus / Minus Query: 1 tggcgccccgcgcgcgcgtggccacgtacaaggtgtgctgggtcggcggctgcttcagct 60 ||||||||||||| ||||| || | |||||||||||||||| || || |||||||||| Sbjct: 65884 tggcgccccgcgcccgcgtcgcggcctacaaggtgtgctgggcgggagggtgcttcagct 65825 Query: 61 ccgacatcctcaagggcatggaggtcgccgtcgccgacggcgttgacgtgctctccctct 120 |||||||||| || | | || |||||| | |||||||| |||||||||||| ||| Sbjct: 65824 ccgacatcctggcggccgtcgatcgcgccgtgtcggacggcgtcgacgtgctctccatct 65765 Query: 121 ccctcggcggtggc 134 ||||||| |||||| Sbjct: 65764 ccctcgggggtggc 65751
>ref|NM_196315.1| Oryza sativa (japonica cultivar-group) putative cucumisin-like serine protease (OSJNBa0011L09.20), mRNA Length = 2322 Score = 69.9 bits (35), Expect = 7e-09 Identities = 56/63 (88%) Strand = Plus / Plus Query: 254 cgcgccttggatcaccaccgtgggcgcggggacgctcgaccgcgacttccccgcctacgt 313 |||||| ||| || ||||||| ||||| || |||||||||||||||||||| |||||||| Sbjct: 1002 cgcgccgtgggtcgccaccgttggcgccggcacgctcgaccgcgacttcccagcctacgt 1061 Query: 314 cac 316 ||| Sbjct: 1062 cac 1064 Score = 60.0 bits (30), Expect = 7e-06 Identities = 105/130 (80%) Strand = Plus / Plus Query: 1 tggcgccccgcgcgcgcgtggccacgtacaaggtgtgctgggtcggcggctgcttcagct 60 |||||||| | |||||||| ||| ||||||||||||||||| | || ||| || ||| Sbjct: 749 tggcgcccggggcgcgcgtcgccgcgtacaaggtgtgctggccggaggggtgcctcggct 808 Query: 61 ccgacatcctcaagggcatggaggtcgccgtcgccgacggcgttgacgtgctctccctct 120 ||||||| ||| ||||| || | ||||| |||||||| || | |||||||||||| | Sbjct: 809 ccgacattctcgccggcattgacgctgccgtggccgacggggtcggcgtgctctccctgt 868 Query: 121 ccctcggcgg 130 |||||||||| Sbjct: 869 ccctcggcgg 878
>gb|AC092388.5| Oryza sativa chromosome 10 BAC OSJNBa0011L09 genomic sequence, complete sequence Length = 177565 Score = 69.9 bits (35), Expect = 7e-09 Identities = 56/63 (88%) Strand = Plus / Minus Query: 254 cgcgccttggatcaccaccgtgggcgcggggacgctcgaccgcgacttccccgcctacgt 313 |||||| ||| || ||||||| ||||| || |||||||||||||||||||| |||||||| Sbjct: 117470 cgcgccgtgggtcgccaccgttggcgccggcacgctcgaccgcgacttcccagcctacgt 117411 Query: 314 cac 316 ||| Sbjct: 117410 cac 117408 Score = 60.0 bits (30), Expect = 7e-06 Identities = 105/130 (80%) Strand = Plus / Minus Query: 1 tggcgccccgcgcgcgcgtggccacgtacaaggtgtgctgggtcggcggctgcttcagct 60 |||||||| | |||||||| ||| ||||||||||||||||| | || ||| || ||| Sbjct: 117723 tggcgcccggggcgcgcgtcgccgcgtacaaggtgtgctggccggaggggtgcctcggct 117664 Query: 61 ccgacatcctcaagggcatggaggtcgccgtcgccgacggcgttgacgtgctctccctct 120 ||||||| ||| ||||| || | ||||| |||||||| || | |||||||||||| | Sbjct: 117663 ccgacattctcgccggcattgacgctgccgtggccgacggggtcggcgtgctctccctgt 117604 Query: 121 ccctcggcgg 130 |||||||||| Sbjct: 117603 ccctcggcgg 117594
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 69.9 bits (35), Expect = 7e-09 Identities = 56/63 (88%) Strand = Plus / Plus Query: 254 cgcgccttggatcaccaccgtgggcgcggggacgctcgaccgcgacttccccgcctacgt 313 |||||| ||| || ||||||| ||||| || |||||||||||||||||||| |||||||| Sbjct: 12646092 cgcgccgtgggtcgccaccgttggcgccggcacgctcgaccgcgacttcccagcctacgt 12646151 Query: 314 cac 316 ||| Sbjct: 12646152 cac 12646154 Score = 60.0 bits (30), Expect = 7e-06 Identities = 105/130 (80%) Strand = Plus / Plus Query: 1 tggcgccccgcgcgcgcgtggccacgtacaaggtgtgctgggtcggcggctgcttcagct 60 |||||||| | |||||||| ||| ||||||||||||||||| | || ||| || ||| Sbjct: 12645839 tggcgcccggggcgcgcgtcgccgcgtacaaggtgtgctggccggaggggtgcctcggct 12645898 Query: 61 ccgacatcctcaagggcatggaggtcgccgtcgccgacggcgttgacgtgctctccctct 120 ||||||| ||| ||||| || | ||||| |||||||| || | |||||||||||| | Sbjct: 12645899 ccgacattctcgccggcattgacgctgccgtggccgacggggtcggcgtgctctccctgt 12645958 Query: 121 ccctcggcgg 130 |||||||||| Sbjct: 12645959 ccctcggcgg 12645968
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 69.9 bits (35), Expect = 7e-09 Identities = 56/63 (88%) Strand = Plus / Plus Query: 254 cgcgccttggatcaccaccgtgggcgcggggacgctcgaccgcgacttccccgcctacgt 313 |||||| ||| || ||||||| ||||| || |||||||||||||||||||| |||||||| Sbjct: 12653432 cgcgccgtgggtcgccaccgttggcgccggcacgctcgaccgcgacttcccagcctacgt 12653491 Query: 314 cac 316 ||| Sbjct: 12653492 cac 12653494 Score = 60.0 bits (30), Expect = 7e-06 Identities = 105/130 (80%) Strand = Plus / Plus Query: 1 tggcgccccgcgcgcgcgtggccacgtacaaggtgtgctgggtcggcggctgcttcagct 60 |||||||| | |||||||| ||| ||||||||||||||||| | || ||| || ||| Sbjct: 12653179 tggcgcccggggcgcgcgtcgccgcgtacaaggtgtgctggccggaggggtgcctcggct 12653238 Query: 61 ccgacatcctcaagggcatggaggtcgccgtcgccgacggcgttgacgtgctctccctct 120 ||||||| ||| ||||| || | ||||| |||||||| || | |||||||||||| | Sbjct: 12653239 ccgacattctcgccggcattgacgctgccgtggccgacggggtcggcgtgctctccctgt 12653298 Query: 121 ccctcggcgg 130 |||||||||| Sbjct: 12653299 ccctcggcgg 12653308
>ref|XM_482712.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2391 Score = 67.9 bits (34), Expect = 3e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 25 cgtacaaggtgtgctgggtcggcggctgcttcagctccgacatcct 70 ||||||||||||||||||| |||||||||||| |||||||||||| Sbjct: 785 cgtacaaggtgtgctgggtgggcggctgcttcgactccgacatcct 830
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 67.9 bits (34), Expect = 3e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 25 cgtacaaggtgtgctgggtcggcggctgcttcagctccgacatcct 70 ||||||||||||||||||| |||||||||||| |||||||||||| Sbjct: 22104687 cgtacaaggtgtgctgggtgggcggctgcttcgactccgacatcct 22104732 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 108 gtgctctccctctccctcgg 127 |||||||||||||||||||| Sbjct: 11588650 gtgctctccctctccctcgg 11588669
>dbj|AP003871.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1117_F10 Length = 169948 Score = 67.9 bits (34), Expect = 3e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 25 cgtacaaggtgtgctgggtcggcggctgcttcagctccgacatcct 70 ||||||||||||||||||| |||||||||||| |||||||||||| Sbjct: 67650 cgtacaaggtgtgctgggtgggcggctgcttcgactccgacatcct 67695
>gb|AY107161.1| Zea mays PCO101731 mRNA sequence Length = 1572 Score = 60.0 bits (30), Expect = 7e-06 Identities = 90/110 (81%) Strand = Plus / Plus Query: 49 gctgcttcagctccgacatcctcaagggcatggaggtcgccgtcgccgacggcgttgacg 108 |||||||||||||||||||||| || | | || |||||| || |||||||| |||| Sbjct: 38 gctgcttcagctccgacatcctggcggccgtcgaccgcgccgtggcggacggcgtcgacg 97 Query: 109 tgctctccctctccctcggcggtggcacgtctgactactaccgcgacagc 158 |||||||| |||| |||||||| ||| |||| ||||| |||||||||| Sbjct: 98 tgctctccatctcgctcggcggcggctcgtccccctacttccgcgacagc 147
>gb|AC108761.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone OSJNBa0087J09, complete sequence Length = 153351 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Minus Query: 86 cgccgtcgccgacggcgttgacgtgctctccctctccctcggcg 129 |||||||||||||||||| ||||| ||||| |||||||||||| Sbjct: 34306 cgccgtcgccgacggcgtcgacgtcatctccgtctccctcggcg 34263
>dbj|AK106911.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-119-A07, full insert sequence Length = 1659 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 86 cgccgtcgccgacggcgttgacgtgctctccctctccctcggcg 129 |||||||||||||||||| ||||| ||||| |||||||||||| Sbjct: 52 cgccgtcgccgacggcgtcgacgtcatctccgtctccctcggcg 95
>ref|XM_475298.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2286 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 91 tcgccgacggcgttgacgtgctctccctctccct 124 ||||||||||||| ||||| |||||||||||||| Sbjct: 830 tcgccgacggcgtcgacgtcctctccctctccct 863
>gb|AC119292.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0088F07, complete sequence Length = 139180 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Minus Query: 91 tcgccgacggcgttgacgtgctctccctctccct 124 ||||||||||||| ||||| |||||||||||||| Sbjct: 63952 tcgccgacggcgtcgacgtcctctccctctccct 63919
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Minus Query: 91 tcgccgacggcgttgacgtgctctccctctccct 124 ||||||||||||| ||||| |||||||||||||| Sbjct: 21183169 tcgccgacggcgtcgacgtcctctccctctccct 21183136
>dbj|AK067138.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013096L15, full insert sequence Length = 2549 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 91 tcgccgacggcgttgacgtgctctccctctccct 124 ||||||||||||| ||||| |||||||||||||| Sbjct: 883 tcgccgacggcgtcgacgtcctctccctctccct 916
>ref|XM_472541.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2331 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Plus Query: 249 aacggcgcgccttggatcaccaccgtgggcgcg 281 ||||||||||| |||||||||||||| |||||| Sbjct: 988 aacggcgcgccgtggatcaccaccgtcggcgcg 1020
>emb|AL606458.5| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0084A10, complete sequence Length = 144811 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Plus Query: 249 aacggcgcgccttggatcaccaccgtgggcgcg 281 ||||||||||| |||||||||||||| |||||| Sbjct: 18041 aacggcgcgccgtggatcaccaccgtcggcgcg 18073
>dbj|AK105112.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-100-G01, full insert sequence Length = 2571 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Plus Query: 249 aacggcgcgccttggatcaccaccgtgggcgcg 281 ||||||||||| |||||||||||||| |||||| Sbjct: 1002 aacggcgcgccgtggatcaccaccgtcggcgcg 1034
>ref|XM_479590.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2337 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 99 ggcgttgacgtgctctccctctccctcgg 127 ||||| |||||||||||| |||||||||| Sbjct: 826 ggcgtcgacgtgctctccatctccctcgg 854
>gb|AC148339.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone B1339A06, complete sequence Length = 132243 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 109 tgctctccctctccctcggcggtgg 133 ||||||| ||||||||||||||||| Sbjct: 1139 tgctctctctctccctcggcggtgg 1115
>emb|AL939119.1|SCO939119 Streptomyces coelicolor A3(2) complete genome; segment 16/29 Length = 299050 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 6 ccccgcgcgcgcgtggccacg 26 ||||||||||||||||||||| Sbjct: 267166 ccccgcgcgcgcgtggccacg 267186
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 79 tggaggtcgccgtcgccgacg 99 ||||||||||||||||||||| Sbjct: 3334772 tggaggtcgccgtcgccgacg 3334792
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 42.1 bits (21), Expect = 1.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 1 tggcgccccgcgcgcgcgtggccacgtacaaggtgtgctgg 41 |||||||| | |||||||| || ||||||||||||||||| Sbjct: 16302822 tggcgcccggtgcgcgcgtcgcggcgtacaaggtgtgctgg 16302862 Score = 40.1 bits (20), Expect = 6.1 Identities = 32/36 (88%) Strand = Plus / Plus Query: 95 cgacggcgttgacgtgctctccctctccctcggcgg 130 ||||||||| |||||||||||| | || |||||||| Sbjct: 18365516 cgacggcgtggacgtgctctccgtgtcgctcggcgg 18365551
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 99 ggcgttgacgtgctctccctctccctcgg 127 ||||| |||||||||||| |||||||||| Sbjct: 29077558 ggcgtcgacgtgctctccatctccctcgg 29077586 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 84 gtcgccgtcgccgacggcgt 103 |||||||||||||||||||| Sbjct: 24661117 gtcgccgtcgccgacggcgt 24661136
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 2 ggcgccccgcgcgcgcgtggc 22 ||||||||||||||||||||| Sbjct: 7978410 ggcgccccgcgcgcgcgtggc 7978430
>gb|AC121491.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0050D18, complete sequence Length = 126350 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 109 tgctctccctctccctcggcggtgg 133 ||||||| ||||||||||||||||| Sbjct: 117376 tgctctctctctccctcggcggtgg 117352
>dbj|AP005518.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0046H10 Length = 155544 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 2 ggcgccccgcgcgcgcgtggc 22 ||||||||||||||||||||| Sbjct: 85928 ggcgccccgcgcgcgcgtggc 85948
>dbj|AP003490.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0592E11 Length = 153734 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 2 ggcgccccgcgcgcgcgtggc 22 ||||||||||||||||||||| Sbjct: 2179 ggcgccccgcgcgcgcgtggc 2199
>dbj|AP005570.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1344_B01 Length = 170912 Score = 42.1 bits (21), Expect = 1.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 1 tggcgccccgcgcgcgcgtggccacgtacaaggtgtgctgg 41 |||||||| | |||||||| || ||||||||||||||||| Sbjct: 119338 tggcgcccggtgcgcgcgtcgcggcgtacaaggtgtgctgg 119378
>dbj|AP003813.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1150_E04 Length = 130973 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 99 ggcgttgacgtgctctccctctccctcgg 127 ||||| |||||||||||| |||||||||| Sbjct: 12676 ggcgtcgacgtgctctccatctccctcgg 12704
>dbj|AP003818.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1200_C08 Length = 106214 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 99 ggcgttgacgtgctctccctctccctcgg 127 ||||| |||||||||||| |||||||||| Sbjct: 25515 ggcgtcgacgtgctctccatctccctcgg 25543
>dbj|AK119348.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-131-E09, full insert sequence Length = 2601 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 99 ggcgttgacgtgctctccctctccctcgg 127 ||||| |||||||||||| |||||||||| Sbjct: 864 ggcgtcgacgtgctctccatctccctcgg 892
>emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid complete sequence Length = 2094509 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 373 ccaccacgccggtgccgttca 393 ||||||||||||||||||||| Sbjct: 1480336 ccaccacgccggtgccgttca 1480316
>ref|XM_481329.1| Oryza sativa (japonica cultivar-group), mRNA Length = 267 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 108 gtgctctccctctccctcgg 127 |||||||||||||||||||| Sbjct: 32 gtgctctccctctccctcgg 13
>ref|XM_474683.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2277 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 95 cgacggcgttgacgtgctctccctctcc 122 ||||||||| |||||||||||| ||||| Sbjct: 825 cgacggcgtcgacgtgctctccatctcc 852
>ref|XM_464493.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2610 Score = 40.1 bits (20), Expect = 6.1 Identities = 32/36 (88%) Strand = Plus / Plus Query: 95 cgacggcgttgacgtgctctccctctccctcggcgg 130 ||||||||| |||| |||||| ||||||||||||| Sbjct: 959 cgacggcgtccacgtcctctccgtctccctcggcgg 994
>ref|XM_479078.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1578 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 84 gtcgccgtcgccgacggcgt 103 |||||||||||||||||||| Sbjct: 871 gtcgccgtcgccgacggcgt 890
>gb|AC114896.5| Oryza sativa chromosome 3 BAC OSJNBa0091B22 genomic sequence, complete sequence Length = 115815 Score = 40.1 bits (20), Expect = 6.1 Identities = 32/36 (88%) Strand = Plus / Minus Query: 3 gcgccccgcgcgcgcgtggccacgtacaaggtgtgc 38 |||||| |||||| ||| |||| ||||||||||||| Sbjct: 26074 gcgcccggcgcgcacgtcgccatgtacaaggtgtgc 26039
>emb|AL603649.9| Human DNA sequence from clone RP11-326N3 on chromosome 9 Contains part of the CRSP8 gene for subunit 8 of a cofactor required for Sp1 transcriptional activation and a CpG island, complete sequence Length = 77621 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 106 acgtgctctccctctccctc 125 |||||||||||||||||||| Sbjct: 45589 acgtgctctccctctccctc 45608
>gb|CP000088.1| Thermobifida fusca YX, complete genome Length = 3642249 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 362 caagcaattgcccaccacgccggtgccg 389 ||||| || ||||||||||||||||||| Sbjct: 1939582 caagccatcgcccaccacgccggtgccg 1939555
>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome Length = 3561584 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 75 ggcatggaggtcgccgtcgc 94 |||||||||||||||||||| Sbjct: 1941445 ggcatggaggtcgccgtcgc 1941426
>gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete genome Length = 3570858 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 79 tggaggtcgccgtcgccgacggcg 102 ||||||||| |||||||||||||| Sbjct: 1965031 tggaggtcgtcgtcgccgacggcg 1965008
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 108 gtgctctccctctccctcgg 127 |||||||||||||||||||| Sbjct: 8841905 gtgctctccctctccctcgg 8841924
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 6.1 Identities = 38/44 (86%) Strand = Plus / Plus Query: 86 cgccgtcgccgacggcgttgacgtgctctccctctccctcggcg 129 |||||| | ||| ||||| |||||||||||| |||| ||||||| Sbjct: 27037954 cgccgtggacgagggcgtcgacgtgctctccatctcgctcggcg 27037997 Score = 40.1 bits (20), Expect = 6.1 Identities = 32/36 (88%) Strand = Plus / Minus Query: 95 cgacggcgttgacgtgctctccctctccctcggcgg 130 ||||||||| |||| |||||| ||||||||||||| Sbjct: 5532159 cgacggcgtccacgtcctctccgtctccctcggcgg 5532124
>gb|AF546151.1|AF546149S3 Streptomyces citricolor PksE (pksE) and TebC (tebC) genes, complete cds Length = 6374 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 370 tgcccaccacgccggtgccg 389 |||||||||||||||||||| Sbjct: 4787 tgcccaccacgccggtgccg 4806
>dbj|AP005383.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1034_C08 Length = 154441 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 108 gtgctctccctctccctcgg 127 |||||||||||||||||||| Sbjct: 142784 gtgctctccctctccctcgg 142803
>dbj|AP004694.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0467G09 Length = 158204 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 108 gtgctctccctctccctcgg 127 |||||||||||||||||||| Sbjct: 48921 gtgctctccctctccctcgg 48940
>dbj|AP005633.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0463G11 Length = 154188 Score = 40.1 bits (20), Expect = 6.1 Identities = 32/36 (88%) Strand = Plus / Plus Query: 95 cgacggcgttgacgtgctctccctctccctcggcgg 130 ||||||||| |||||||||||| | || |||||||| Sbjct: 80252 cgacggcgtggacgtgctctccgtgtcgctcggcgg 80287
>dbj|AP005392.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0463D04 Length = 145828 Score = 40.1 bits (20), Expect = 6.1 Identities = 32/36 (88%) Strand = Plus / Plus Query: 95 cgacggcgttgacgtgctctccctctccctcggcgg 130 ||||||||| |||||||||||| | || |||||||| Sbjct: 27390 cgacggcgtggacgtgctctccgtgtcgctcggcgg 27425
>dbj|AP004139.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1486_E07 Length = 110494 Score = 40.1 bits (20), Expect = 6.1 Identities = 38/44 (86%) Strand = Plus / Plus Query: 86 cgccgtcgccgacggcgttgacgtgctctccctctccctcggcg 129 |||||| | ||| ||||| |||||||||||| |||| ||||||| Sbjct: 9603 cgccgtggacgagggcgtcgacgtgctctccatctcgctcggcg 9646
>dbj|AP004812.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0026H03 Length = 151827 Score = 40.1 bits (20), Expect = 6.1 Identities = 32/36 (88%) Strand = Plus / Minus Query: 95 cgacggcgttgacgtgctctccctctccctcggcgg 130 ||||||||| |||| |||||| ||||||||||||| Sbjct: 76894 cgacggcgtccacgtcctctccgtctccctcggcgg 76859
>dbj|AP005809.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0039M16 Length = 133229 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 84 gtcgccgtcgccgacggcgt 103 |||||||||||||||||||| Sbjct: 117184 gtcgccgtcgccgacggcgt 117203
>dbj|AP005175.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0040H10 Length = 132919 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 84 gtcgccgtcgccgacggcgt 103 |||||||||||||||||||| Sbjct: 17054 gtcgccgtcgccgacggcgt 17073
>dbj|AP005108.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0461B08 Length = 153743 Score = 40.1 bits (20), Expect = 6.1 Identities = 38/44 (86%) Strand = Plus / Plus Query: 86 cgccgtcgccgacggcgttgacgtgctctccctctccctcggcg 129 |||||| | ||| ||||| |||||||||||| |||| ||||||| Sbjct: 91156 cgccgtggacgagggcgtcgacgtgctctccatctcgctcggcg 91199
>dbj|AB091928.1| Camelus dromedarius IgVH mRNA for immunoglobulin heavy chain VHDJ region, partial cds, clone:TH0100H Length = 432 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 73 agggcatggaggtcgccgtcgccg 96 ||||||| |||||||||||||||| Sbjct: 401 agggcatcgaggtcgccgtcgccg 424
>dbj|AK120287.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013050B17, full insert sequence Length = 2614 Score = 40.1 bits (20), Expect = 6.1 Identities = 32/36 (88%) Strand = Plus / Plus Query: 95 cgacggcgttgacgtgctctccctctccctcggcgg 130 ||||||||| |||| |||||| ||||||||||||| Sbjct: 960 cgacggcgtccacgtcctctccgtctccctcggcgg 995
>dbj|AK100551.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023103I17, full insert sequence Length = 2893 Score = 40.1 bits (20), Expect = 6.1 Identities = 38/44 (86%) Strand = Plus / Plus Query: 86 cgccgtcgccgacggcgttgacgtgctctccctctccctcggcg 129 |||||| | ||| ||||| |||||||||||| |||| ||||||| Sbjct: 1023 cgccgtggacgagggcgtcgacgtgctctccatctcgctcggcg 1066
>dbj|AK072929.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023148I21, full insert sequence Length = 3195 Score = 40.1 bits (20), Expect = 6.1 Identities = 38/44 (86%) Strand = Plus / Plus Query: 86 cgccgtcgccgacggcgttgacgtgctctccctctccctcggcg 129 |||||| | ||| ||||| |||||||||||| |||| ||||||| Sbjct: 938 cgccgtggacgagggcgtcgacgtgctctccatctcgctcggcg 981
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 108 gtgctctccctctccctcgg 127 |||||||||||||||||||| Sbjct: 8841788 gtgctctccctctccctcgg 8841807
>emb|AL954154.5|CNS08CCS Oryza sativa chromosome 12, . BAC OSJNBb0072E04 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 151176 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 108 gtgctctccctctccctcgg 127 |||||||||||||||||||| Sbjct: 30534 gtgctctccctctccctcgg 30553
>emb|AL662994.3|OSJN00192 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0006L01, complete sequence Length = 162227 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 95 cgacggcgttgacgtgctctccctctcc 122 ||||||||| |||||||||||| ||||| Sbjct: 20291 cgacggcgtcgacgtgctctccatctcc 20264
>emb|AL662934.3|OSJN00136 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0027O01, complete sequence Length = 150283 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 95 cgacggcgttgacgtgctctccctctcc 122 ||||||||| |||||||||||| ||||| Sbjct: 117714 cgacggcgtcgacgtgctctccatctcc 117687
>emb|AL928776.4|CNS08CC6 Oryza sativa chromosome 12, . BAC OSJNBa0036A15 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 195500 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 108 gtgctctccctctccctcgg 127 |||||||||||||||||||| Sbjct: 264 gtgctctccctctccctcgg 245
>emb|AL670446.8| Mouse DNA sequence from clone RP23-291H3 on chromosome 4, complete sequence Length = 171444 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 109 tgctctccctctccctcggc 128 |||||||||||||||||||| Sbjct: 40796 tgctctccctctccctcggc 40815
>dbj|AB037371.1| Oryza sativa (japonica cultivar-group) rsp1 mRNA for subtilisin-like serine protease, complete cds Length = 3026 Score = 40.1 bits (20), Expect = 6.1 Identities = 38/44 (86%) Strand = Plus / Plus Query: 86 cgccgtcgccgacggcgttgacgtgctctccctctccctcggcg 129 |||||| | ||| ||||| |||||||||||| |||| ||||||| Sbjct: 1107 cgccgtggacgagggcgtcgacgtgctctccatctcgctcggcg 1150 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,031,556 Number of Sequences: 3902068 Number of extensions: 3031556 Number of successful extensions: 150845 Number of sequences better than 10.0: 80 Number of HSP's better than 10.0 without gapping: 93 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 148502 Number of HSP's gapped (non-prelim): 2343 length of query: 455 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 433 effective length of database: 17,147,199,772 effective search space: 7424737501276 effective search space used: 7424737501276 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
