ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast79e08 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 418 bits (211), Expect = e-114 Identities = 327/365 (89%), Gaps = 3/365 (0%) Strand = Plus / Minus Query: 9 ggcccgaggcggtgttcaagaaggtgttcggggacctcaccgtgcgcgacgcggccaagc 68 |||| ||| |||||||||||||||||||||| ||||| || ||| | ||||| ||||||| Sbjct: 27726784 ggccggagtcggtgttcaagaaggtgttcggcgacctgacggtgagggacgccgccaagc 27726725 Query: 69 cgctgctgatcccctgctacgatatggccacggccgcgccgttcgtcttctcccgcgccg 128 |||||||||| ||||||||||| ||||| ||||| ||||||||||||||||||||||||| Sbjct: 27726724 cgctgctgataccctgctacgacatggcgacggcggcgccgttcgtcttctcccgcgccg 27726665 Query: 129 acgccgtcgaggccgaggcgttcgacttcccgctctggcaggtctgcgcggccgcgtgcg 188 |||||||||||||||| ||||||||||||||||| |||||||||||||| || ||||||| Sbjct: 27726664 acgccgtcgaggccgacgcgttcgacttcccgctgtggcaggtctgcgccgcggcgtgcg 27726605 Query: 189 gggtggggccggccgaggtggcgtccctcgacgggcgcaccacgctgcgcgccgccgcgg 248 | ||||| || |||||||| || ||||||||||| || |||| ||| |||||||| |||| Sbjct: 27726604 gcgtgggccccgccgaggtcgcctccctcgacggccggaccaggctccgcgccgcggcgg 27726545 Query: 249 cggcaggcgggaccggcgccggcgtggccaacccgaccgccgtggccgtcacccacgtgc 308 | | ||||| ||||| || |||| |||||||| |||| ||||||||||||||||||| Sbjct: 27726544 ccacgggcgg---cggcggcgccgtgtccaacccggccgcggtggccgtcacccacgtgc 27726488 Query: 309 tccacaacaagcgcgagttccccttcgccgccggcgccggagacctcgtcgtgctgtccc 368 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 27726487 tccacaacaagcgcgagttccccttcgccgccggcgccggcgacctcgtcgtgctgtccc 27726428 Query: 369 tcggc 373 ||||| Sbjct: 27726427 tcggc 27726423 Score = 52.0 bits (26), Expect = 0.001 Identities = 32/34 (94%) Strand = Plus / Plus Query: 106 gccgttcgtcttctcccgcgccgacgccgtcgag 139 ||||||| |||||||||||||| ||||||||||| Sbjct: 14609943 gccgttcctcttctcccgcgccaacgccgtcgag 14609976
>dbj|AP004989.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:B1153E06 Length = 174588 Score = 418 bits (211), Expect = e-114 Identities = 327/365 (89%), Gaps = 3/365 (0%) Strand = Plus / Minus Query: 9 ggcccgaggcggtgttcaagaaggtgttcggggacctcaccgtgcgcgacgcggccaagc 68 |||| ||| |||||||||||||||||||||| ||||| || ||| | ||||| ||||||| Sbjct: 76039 ggccggagtcggtgttcaagaaggtgttcggcgacctgacggtgagggacgccgccaagc 75980 Query: 69 cgctgctgatcccctgctacgatatggccacggccgcgccgttcgtcttctcccgcgccg 128 |||||||||| ||||||||||| ||||| ||||| ||||||||||||||||||||||||| Sbjct: 75979 cgctgctgataccctgctacgacatggcgacggcggcgccgttcgtcttctcccgcgccg 75920 Query: 129 acgccgtcgaggccgaggcgttcgacttcccgctctggcaggtctgcgcggccgcgtgcg 188 |||||||||||||||| ||||||||||||||||| |||||||||||||| || ||||||| Sbjct: 75919 acgccgtcgaggccgacgcgttcgacttcccgctgtggcaggtctgcgccgcggcgtgcg 75860 Query: 189 gggtggggccggccgaggtggcgtccctcgacgggcgcaccacgctgcgcgccgccgcgg 248 | ||||| || |||||||| || ||||||||||| || |||| ||| |||||||| |||| Sbjct: 75859 gcgtgggccccgccgaggtcgcctccctcgacggccggaccaggctccgcgccgcggcgg 75800 Query: 249 cggcaggcgggaccggcgccggcgtggccaacccgaccgccgtggccgtcacccacgtgc 308 | | ||||| ||||| || |||| |||||||| |||| ||||||||||||||||||| Sbjct: 75799 ccacgggcgg---cggcggcgccgtgtccaacccggccgcggtggccgtcacccacgtgc 75743 Query: 309 tccacaacaagcgcgagttccccttcgccgccggcgccggagacctcgtcgtgctgtccc 368 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 75742 tccacaacaagcgcgagttccccttcgccgccggcgccggcgacctcgtcgtgctgtccc 75683 Query: 369 tcggc 373 ||||| Sbjct: 75682 tcggc 75678
>dbj|AP003728.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0710B08 Length = 186991 Score = 418 bits (211), Expect = e-114 Identities = 327/365 (89%), Gaps = 3/365 (0%) Strand = Plus / Minus Query: 9 ggcccgaggcggtgttcaagaaggtgttcggggacctcaccgtgcgcgacgcggccaagc 68 |||| ||| |||||||||||||||||||||| ||||| || ||| | ||||| ||||||| Sbjct: 29293 ggccggagtcggtgttcaagaaggtgttcggcgacctgacggtgagggacgccgccaagc 29234 Query: 69 cgctgctgatcccctgctacgatatggccacggccgcgccgttcgtcttctcccgcgccg 128 |||||||||| ||||||||||| ||||| ||||| ||||||||||||||||||||||||| Sbjct: 29233 cgctgctgataccctgctacgacatggcgacggcggcgccgttcgtcttctcccgcgccg 29174 Query: 129 acgccgtcgaggccgaggcgttcgacttcccgctctggcaggtctgcgcggccgcgtgcg 188 |||||||||||||||| ||||||||||||||||| |||||||||||||| || ||||||| Sbjct: 29173 acgccgtcgaggccgacgcgttcgacttcccgctgtggcaggtctgcgccgcggcgtgcg 29114 Query: 189 gggtggggccggccgaggtggcgtccctcgacgggcgcaccacgctgcgcgccgccgcgg 248 | ||||| || |||||||| || ||||||||||| || |||| ||| |||||||| |||| Sbjct: 29113 gcgtgggccccgccgaggtcgcctccctcgacggccggaccaggctccgcgccgcggcgg 29054 Query: 249 cggcaggcgggaccggcgccggcgtggccaacccgaccgccgtggccgtcacccacgtgc 308 | | ||||| ||||| || |||| |||||||| |||| ||||||||||||||||||| Sbjct: 29053 ccacgggcgg---cggcggcgccgtgtccaacccggccgcggtggccgtcacccacgtgc 28997 Query: 309 tccacaacaagcgcgagttccccttcgccgccggcgccggagacctcgtcgtgctgtccc 368 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 28996 tccacaacaagcgcgagttccccttcgccgccggcgccggcgacctcgtcgtgctgtccc 28937 Query: 369 tcggc 373 ||||| Sbjct: 28936 tcggc 28932
>ref|NM_185019.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1389 Score = 73.8 bits (37), Expect = 4e-10 Identities = 49/53 (92%) Strand = Plus / Plus Query: 292 ggccgtcacccacgtgctccacaacaagcgcgagttccccttcgccgccggcg 344 |||| |||||||||||||| ||||||||||||||||||| |||||||||||| Sbjct: 798 ggccatcacccacgtgctcaacaacaagcgcgagttccctctcgccgccggcg 850 Score = 65.9 bits (33), Expect = 9e-08 Identities = 48/53 (90%) Strand = Plus / Plus Query: 106 gccgttcgtcttctcccgcgccgacgccgtcgaggccgaggcgttcgacttcc 158 ||||||| |||||||||||||||||||||||||| | | ||||| |||||||| Sbjct: 609 gccgttcctcttctcccgcgccgacgccgtcgagacggcggcgtacgacttcc 661
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 73.8 bits (37), Expect = 4e-10 Identities = 49/53 (92%) Strand = Plus / Minus Query: 292 ggccgtcacccacgtgctccacaacaagcgcgagttccccttcgccgccggcg 344 |||| |||||||||||||| ||||||||||||||||||| |||||||||||| Sbjct: 32237854 ggccatcacccacgtgctcaacaacaagcgcgagttccctctcgccgccggcg 32237802 Score = 65.9 bits (33), Expect = 9e-08 Identities = 48/53 (90%) Strand = Plus / Minus Query: 106 gccgttcgtcttctcccgcgccgacgccgtcgaggccgaggcgttcgacttcc 158 ||||||| |||||||||||||||||||||||||| | | ||||| |||||||| Sbjct: 32238043 gccgttcctcttctcccgcgccgacgccgtcgagacggcggcgtacgacttcc 32237991 Score = 58.0 bits (29), Expect = 2e-05 Identities = 62/73 (84%) Strand = Plus / Minus Query: 67 gccgctgctgatcccctgctacgatatggccacggccgcgccgttcgtcttctcccgcgc 126 ||||||||| |||| |||||||| | ||||| |||||||| ||| | ||||| ||||| Sbjct: 24504753 gccgctgctcgtcccgtgctacgacctcgccaccgccgcgcctttcatgttctcgcgcgc 24504694 Query: 127 cgacgccgtcgag 139 ||||||||||||| Sbjct: 24504693 cgacgccgtcgag 24504681 Score = 58.0 bits (29), Expect = 2e-05 Identities = 53/61 (86%) Strand = Plus / Minus Query: 277 caacccgaccgccgtggccgtcacccacgtgctccacaacaagcgcgagttccccttcgc 336 ||||||| |||| | |||| |||| ||||||||||||||||||| ||||||||| |||| Sbjct: 24504546 caacccggccgcggcggccatcacgcacgtgctccacaacaagcaggagttccccctcgc 24504487 Query: 337 c 337 | Sbjct: 24504486 c 24504486 Score = 56.0 bits (28), Expect = 8e-05 Identities = 58/68 (85%) Strand = Plus / Plus Query: 277 caacccgaccgccgtggccgtcacccacgtgctccacaacaagcgcgagttccccttcgc 336 |||||| ||||||| ||| ||||||| || |||||||||||| ||||||||| |||| Sbjct: 17099122 caaccccaccgccgccgccatcacccaagtcctccacaacaagtaggagttccccctcgc 17099181 Query: 337 cgccggcg 344 |||||||| Sbjct: 17099182 cgccggcg 17099189 Score = 42.1 bits (21), Expect = 1.3 Identities = 45/53 (84%) Strand = Plus / Minus Query: 277 caacccgaccgccgtggccgtcacccacgtgctccacaacaagcgcgagttcc 329 |||||| ||||||| ||| ||||||| || ||||||||||||| ||||||| Sbjct: 12001937 caaccccaccgccgccgccatcacccaagtcctccacaacaagcaggagttcc 12001885 Score = 40.1 bits (20), Expect = 5.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 102 ccgcgccgttcgtcttctcccgcgccgacgcc 133 |||||||| |||| ||||| |||||||||||| Sbjct: 8124568 ccgcgccgctcgtgttctcgcgcgccgacgcc 8124599
>gb|AC091123.4| Oryza sativa chromosome 3 BAC OSJNBb0093E13 genomic sequence, complete sequence Length = 129778 Score = 73.8 bits (37), Expect = 4e-10 Identities = 49/53 (92%) Strand = Plus / Minus Query: 292 ggccgtcacccacgtgctccacaacaagcgcgagttccccttcgccgccggcg 344 |||| |||||||||||||| ||||||||||||||||||| |||||||||||| Sbjct: 89528 ggccatcacccacgtgctcaacaacaagcgcgagttccctctcgccgccggcg 89476 Score = 65.9 bits (33), Expect = 9e-08 Identities = 48/53 (90%) Strand = Plus / Minus Query: 106 gccgttcgtcttctcccgcgccgacgccgtcgaggccgaggcgttcgacttcc 158 ||||||| |||||||||||||||||||||||||| | | ||||| |||||||| Sbjct: 89717 gccgttcctcttctcccgcgccgacgccgtcgagacggcggcgtacgacttcc 89665
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 73.8 bits (37), Expect = 4e-10 Identities = 64/73 (87%) Strand = Plus / Minus Query: 67 gccgctgctgatcccctgctacgatatggccacggccgcgccgttcgtcttctcccgcgc 126 ||||||||| |||| |||||||| | ||||| || ||||||||| ||||||||||||| Sbjct: 25873399 gccgctgctcgtcccgtgctacgacctcgccaccgcggcgccgttcctcttctcccgcgc 25873340 Query: 127 cgacgccgtcgag 139 ||||||||||||| Sbjct: 25873339 cgacgccgtcgag 25873327 Score = 71.9 bits (36), Expect = 1e-09 Identities = 60/68 (88%) Strand = Plus / Minus Query: 277 caacccgaccgccgtggccgtcacccacgtgctccacaacaagcgcgagttccccttcgc 336 |||||| ||||||| ||| |||||||||| ||||||||||||| ||||||||| |||| Sbjct: 25873192 caaccccaccgccgccgccatcacccacgtcctccacaacaagcaggagttccccctcgc 25873133 Query: 337 cgccggcg 344 |||||||| Sbjct: 25873132 cgccggcg 25873125
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 73.8 bits (37), Expect = 4e-10 Identities = 49/53 (92%) Strand = Plus / Minus Query: 292 ggccgtcacccacgtgctccacaacaagcgcgagttccccttcgccgccggcg 344 |||| |||||||||||||| ||||||||||||||||||| |||||||||||| Sbjct: 32328366 ggccatcacccacgtgctcaacaacaagcgcgagttccctctcgccgccggcg 32328314 Score = 65.9 bits (33), Expect = 9e-08 Identities = 48/53 (90%) Strand = Plus / Minus Query: 106 gccgttcgtcttctcccgcgccgacgccgtcgaggccgaggcgttcgacttcc 158 ||||||| |||||||||||||||||||||||||| | | ||||| |||||||| Sbjct: 32328555 gccgttcctcttctcccgcgccgacgccgtcgagacggcggcgtacgacttcc 32328503 Score = 58.0 bits (29), Expect = 2e-05 Identities = 62/73 (84%) Strand = Plus / Minus Query: 67 gccgctgctgatcccctgctacgatatggccacggccgcgccgttcgtcttctcccgcgc 126 ||||||||| |||| |||||||| | ||||| |||||||| ||| | ||||| ||||| Sbjct: 24422222 gccgctgctcgtcccgtgctacgacctcgccaccgccgcgcctttcatgttctcgcgcgc 24422163 Query: 127 cgacgccgtcgag 139 ||||||||||||| Sbjct: 24422162 cgacgccgtcgag 24422150 Score = 58.0 bits (29), Expect = 2e-05 Identities = 53/61 (86%) Strand = Plus / Minus Query: 277 caacccgaccgccgtggccgtcacccacgtgctccacaacaagcgcgagttccccttcgc 336 ||||||| |||| | |||| |||| ||||||||||||||||||| ||||||||| |||| Sbjct: 24422015 caacccggccgcggcggccatcacgcacgtgctccacaacaagcaggagttccccctcgc 24421956 Query: 337 c 337 | Sbjct: 24421955 c 24421955 Score = 56.0 bits (28), Expect = 8e-05 Identities = 58/68 (85%) Strand = Plus / Plus Query: 277 caacccgaccgccgtggccgtcacccacgtgctccacaacaagcgcgagttccccttcgc 336 |||||| ||||||| ||| ||||||| || |||||||||||| ||||||||| |||| Sbjct: 17092691 caaccccaccgccgccgccatcacccaagtcctccacaacaagtaggagttccccctcgc 17092750 Query: 337 cgccggcg 344 |||||||| Sbjct: 17092751 cgccggcg 17092758 Score = 42.1 bits (21), Expect = 1.3 Identities = 45/53 (84%) Strand = Plus / Minus Query: 277 caacccgaccgccgtggccgtcacccacgtgctccacaacaagcgcgagttcc 329 |||||| ||||||| ||| ||||||| || ||||||||||||| ||||||| Sbjct: 11998700 caaccccaccgccgccgccatcacccaagtcctccacaacaagcaggagttcc 11998648 Score = 40.1 bits (20), Expect = 5.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 102 ccgcgccgttcgtcttctcccgcgccgacgcc 133 |||||||| |||| ||||| |||||||||||| Sbjct: 8122403 ccgcgccgctcgtgttctcgcgcgccgacgcc 8122434
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 73.8 bits (37), Expect = 4e-10 Identities = 64/73 (87%) Strand = Plus / Minus Query: 67 gccgctgctgatcccctgctacgatatggccacggccgcgccgttcgtcttctcccgcgc 126 ||||||||| |||| |||||||| | ||||| || ||||||||| ||||||||||||| Sbjct: 25801575 gccgctgctcgtcccgtgctacgacctcgccaccgcggcgccgttcctcttctcccgcgc 25801516 Query: 127 cgacgccgtcgag 139 ||||||||||||| Sbjct: 25801515 cgacgccgtcgag 25801503 Score = 71.9 bits (36), Expect = 1e-09 Identities = 60/68 (88%) Strand = Plus / Minus Query: 277 caacccgaccgccgtggccgtcacccacgtgctccacaacaagcgcgagttccccttcgc 336 |||||| ||||||| ||| |||||||||| ||||||||||||| ||||||||| |||| Sbjct: 25801368 caaccccaccgccgccgccatcacccacgtcctccacaacaagcaggagttccccctcgc 25801309 Query: 337 cgccggcg 344 |||||||| Sbjct: 25801308 cgccggcg 25801301
>emb|AL928780.5|CNS08CCA Oryza sativa chromosome 12, . BAC OSJNBa0018C20 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 137492 Score = 73.8 bits (37), Expect = 4e-10 Identities = 64/73 (87%) Strand = Plus / Minus Query: 67 gccgctgctgatcccctgctacgatatggccacggccgcgccgttcgtcttctcccgcgc 126 ||||||||| |||| |||||||| | ||||| || ||||||||| ||||||||||||| Sbjct: 94850 gccgctgctcgtcccgtgctacgacctcgccaccgcggcgccgttcctcttctcccgcgc 94791 Query: 127 cgacgccgtcgag 139 ||||||||||||| Sbjct: 94790 cgacgccgtcgag 94778 Score = 71.9 bits (36), Expect = 1e-09 Identities = 60/68 (88%) Strand = Plus / Minus Query: 277 caacccgaccgccgtggccgtcacccacgtgctccacaacaagcgcgagttccccttcgc 336 |||||| ||||||| ||| |||||||||| ||||||||||||| ||||||||| |||| Sbjct: 94643 caaccccaccgccgccgccatcacccacgtcctccacaacaagcaggagttccccctcgc 94584 Query: 337 cgccggcg 344 |||||||| Sbjct: 94583 cgccggcg 94576
>gb|AC147427.2| Oryza sativa chromosome 3 B1394A07 genomic sequence, complete sequence Length = 175704 Score = 58.0 bits (29), Expect = 2e-05 Identities = 53/61 (86%) Strand = Plus / Plus Query: 277 caacccgaccgccgtggccgtcacccacgtgctccacaacaagcgcgagttccccttcgc 336 ||||||| |||| | |||| |||| ||||||||||||||||||| ||||||||| |||| Sbjct: 131314 caacccggccgcggcggccatcacgcacgtgctccacaacaagcaggagttccccctcgc 131373 Query: 337 c 337 | Sbjct: 131374 c 131374 Score = 58.0 bits (29), Expect = 2e-05 Identities = 62/73 (84%) Strand = Plus / Plus Query: 67 gccgctgctgatcccctgctacgatatggccacggccgcgccgttcgtcttctcccgcgc 126 ||||||||| |||| |||||||| | ||||| |||||||| ||| | ||||| ||||| Sbjct: 131107 gccgctgctcgtcccgtgctacgacctcgccaccgccgcgcctttcatgttctcgcgcgc 131166 Query: 127 cgacgccgtcgag 139 ||||||||||||| Sbjct: 131167 cgacgccgtcgag 131179
>ref|XM_468697.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1248 Score = 56.0 bits (28), Expect = 8e-05 Identities = 58/68 (85%) Strand = Plus / Plus Query: 277 caacccgaccgccgtggccgtcacccacgtgctccacaacaagcgcgagttccccttcgc 336 |||||| ||||||| ||| ||||||| || |||||||||||| ||||||||| |||| Sbjct: 832 caaccccaccgccgccgccatcacccaagtcctccacaacaagtaggagttccccctcgc 891 Query: 337 cgccggcg 344 |||||||| Sbjct: 892 cgccggcg 899
>gb|AC120538.4| Oryza sativa chromosome 3 BAC OSJNBb0059G13 genomic sequence, complete sequence Length = 157662 Score = 56.0 bits (28), Expect = 8e-05 Identities = 58/68 (85%) Strand = Plus / Plus Query: 277 caacccgaccgccgtggccgtcacccacgtgctccacaacaagcgcgagttccccttcgc 336 |||||| ||||||| ||| ||||||| || |||||||||||| ||||||||| |||| Sbjct: 129868 caaccccaccgccgccgccatcacccaagtcctccacaacaagtaggagttccccctcgc 129927 Query: 337 cgccggcg 344 |||||||| Sbjct: 129928 cgccggcg 129935
>ref|NM_186278.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1242 Score = 54.0 bits (27), Expect = 3e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 104 gcgccgttcgtcttctcccgcgccgacgccg 134 ||||||||| ||||||||||||||||||||| Sbjct: 541 gcgccgttcctcttctcccgcgccgacgccg 571 Score = 46.1 bits (23), Expect = 0.081 Identities = 56/67 (83%) Strand = Plus / Plus Query: 278 aacccgaccgccgtggccgtcacccacgtgctccacaacaagcgcgagttccccttcgcc 337 |||||||| |||| ||| |||||||||| ||| ||||| ||||||||||||| ||| Sbjct: 715 aacccgacggccgcggcgatcacccacgttctcaacaaccggcgcgagttccccgccgcg 774 Query: 338 gccggcg 344 ||||||| Sbjct: 775 gccggcg 781
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 54.0 bits (27), Expect = 3e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 104 gcgccgttcgtcttctcccgcgccgacgccg 134 ||||||||| ||||||||||||||||||||| Sbjct: 2290088 gcgccgttcctcttctcccgcgccgacgccg 2290118 Score = 46.1 bits (23), Expect = 0.081 Identities = 56/67 (83%) Strand = Plus / Plus Query: 278 aacccgaccgccgtggccgtcacccacgtgctccacaacaagcgcgagttccccttcgcc 337 |||||||| |||| ||| |||||||||| ||| ||||| ||||||||||||| ||| Sbjct: 2290262 aacccgacggccgcggcgatcacccacgttctcaacaaccggcgcgagttccccgccgcg 2290321 Query: 338 gccggcg 344 ||||||| Sbjct: 2290322 gccggcg 2290328 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 121 ccgcgccgacgccgtcgagg 140 |||||||||||||||||||| Sbjct: 26473514 ccgcgccgacgccgtcgagg 26473533 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 227 accacgctgcgcgccgccgcggcg 250 |||||| ||||||||||||||||| Sbjct: 20347495 accacggtgcgcgccgccgcggcg 20347472
>dbj|AP003824.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1343_B12 Length = 121362 Score = 54.0 bits (27), Expect = 3e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 104 gcgccgttcgtcttctcccgcgccgacgccg 134 ||||||||| ||||||||||||||||||||| Sbjct: 63787 gcgccgttcctcttctcccgcgccgacgccg 63817 Score = 46.1 bits (23), Expect = 0.081 Identities = 56/67 (83%) Strand = Plus / Plus Query: 278 aacccgaccgccgtggccgtcacccacgtgctccacaacaagcgcgagttccccttcgcc 337 |||||||| |||| ||| |||||||||| ||| ||||| ||||||||||||| ||| Sbjct: 63961 aacccgacggccgcggcgatcacccacgttctcaacaaccggcgcgagttccccgccgcg 64020 Query: 338 gccggcg 344 ||||||| Sbjct: 64021 gccggcg 64027
>gb|AC123526.2| Oryza sativa japonica cultivar-group chromosome 11 clone OSJNBa0059J06, complete sequence Length = 185449 Score = 52.0 bits (26), Expect = 0.001 Identities = 32/34 (94%) Strand = Plus / Minus Query: 106 gccgttcgtcttctcccgcgccgacgccgtcgag 139 ||||||| |||||||||| ||||||||||||||| Sbjct: 137962 gccgttcctcttctcccgtgccgacgccgtcgag 137929
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 52.0 bits (26), Expect = 0.001 Identities = 32/34 (94%) Strand = Plus / Minus Query: 106 gccgttcgtcttctcccgcgccgacgccgtcgag 139 ||||||| |||||||||| ||||||||||||||| Sbjct: 2066407 gccgttcctcttctcccgtgccgacgccgtcgag 2066374
>dbj|AP005914.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBb0027A16 Length = 129953 Score = 52.0 bits (26), Expect = 0.001 Identities = 32/34 (94%) Strand = Plus / Plus Query: 106 gccgttcgtcttctcccgcgccgacgccgtcgag 139 ||||||| |||||||||||||| ||||||||||| Sbjct: 64204 gccgttcctcttctcccgcgccaacgccgtcgag 64237
>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome Length = 2595221 Score = 52.0 bits (26), Expect = 0.001 Identities = 29/30 (96%) Strand = Plus / Minus Query: 124 cgccgacgccgtcgaggccgaggcgttcga 153 ||||||||||||||||||||| |||||||| Sbjct: 586821 cgccgacgccgtcgaggccgacgcgttcga 586792 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 124 cgccgacgccgtcgaggccg 143 |||||||||||||||||||| Sbjct: 283713 cgccgacgccgtcgaggccg 283694
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 52.0 bits (26), Expect = 0.001 Identities = 32/34 (94%) Strand = Plus / Minus Query: 106 gccgttcgtcttctcccgcgccgacgccgtcgag 139 ||||||| |||||||||| ||||||||||||||| Sbjct: 2074188 gccgttcctcttctcccgtgccgacgccgtcgag 2074155
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 48.1 bits (24), Expect = 0.020 Identities = 24/24 (100%) Strand = Plus / Minus Query: 121 ccgcgccgacgccgtcgaggccga 144 |||||||||||||||||||||||| Sbjct: 3491020 ccgcgccgacgccgtcgaggccga 3490997 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 124 cgccgacgccgtcgaggccgaggc 147 |||||||| ||||||||||||||| Sbjct: 5590802 cgccgacgtcgtcgaggccgaggc 5590779 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 10 gcccgaggcggtgttcaaga 29 |||||||||||||||||||| Sbjct: 1726469 gcccgaggcggtgttcaaga 1726450
>ref|XM_480119.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1133 Score = 46.1 bits (23), Expect = 0.081 Identities = 26/27 (96%) Strand = Plus / Minus Query: 333 tcgccgccggcgccggagacctcgtcg 359 |||||||||||||||| |||||||||| Sbjct: 872 tcgccgccggcgccggcgacctcgtcg 846
>ref|XM_472659.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 636 Score = 46.1 bits (23), Expect = 0.081 Identities = 23/23 (100%) Strand = Plus / Minus Query: 325 gttccccttcgccgccggcgccg 347 ||||||||||||||||||||||| Sbjct: 534 gttccccttcgccgccggcgccg 512
>emb|AL606615.4|OSJN00048 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0086B14, complete sequence Length = 175698 Score = 46.1 bits (23), Expect = 0.081 Identities = 23/23 (100%) Strand = Plus / Minus Query: 325 gttccccttcgccgccggcgccg 347 ||||||||||||||||||||||| Sbjct: 4690 gttccccttcgccgccggcgccg 4668
>gb|AE005839.1| Caulobacter crescentus CB15 section 165 of 359 of the complete genome Length = 13036 Score = 46.1 bits (23), Expect = 0.081 Identities = 26/27 (96%) Strand = Plus / Plus Query: 127 cgacgccgtcgaggccgaggcgttcga 153 ||||||||||||||||| ||||||||| Sbjct: 8420 cgacgccgtcgaggccggggcgttcga 8446
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 46.1 bits (23), Expect = 0.081 Identities = 23/23 (100%) Strand = Plus / Minus Query: 325 gttccccttcgccgccggcgccg 347 ||||||||||||||||||||||| Sbjct: 22400935 gttccccttcgccgccggcgccg 22400913 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 324 agttccccttcgccgccggcg 344 ||||||||||||||||||||| Sbjct: 26955533 agttccccttcgccgccggcg 26955513 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 124 cgccgacgccgtcgaggccg 143 |||||||||||||||||||| Sbjct: 31032947 cgccgacgccgtcgaggccg 31032928 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 329 cccttcgccgccggcgccgg 348 |||||||||||||||||||| Sbjct: 22082891 cccttcgccgccggcgccgg 22082910
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 46.1 bits (23), Expect = 0.081 Identities = 26/27 (96%) Strand = Plus / Minus Query: 333 tcgccgccggcgccggagacctcgtcg 359 |||||||||||||||| |||||||||| Sbjct: 2914676 tcgccgccggcgccggcgacctcgtcg 2914650
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 46.1 bits (23), Expect = 0.081 Identities = 32/35 (91%) Strand = Plus / Plus Query: 238 cgccgccgcggcggcaggcgggaccggcgccggcg 272 ||||||||| |||||||||||| || ||||||||| Sbjct: 1928736 cgccgccgccgcggcaggcggggcccgcgccggcg 1928770 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 229 cacgctgcgcgccgccgcggcggc 252 ||||| |||||||||||||||||| Sbjct: 2990730 cacgccgcgcgccgccgcggcggc 2990753 Score = 40.1 bits (20), Expect = 5.0 Identities = 35/40 (87%) Strand = Plus / Minus Query: 115 cttctcccgcgccgacgccgtcgaggccgaggcgttcgac 154 ||||||| ||| |||||| |||||||||||| ||||||| Sbjct: 2399872 cttctccggcggcgacgcggtcgaggccgagctgttcgac 2399833 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 228 ccacgctgcgcgccgccgcg 247 |||||||||||||||||||| Sbjct: 1405774 ccacgctgcgcgccgccgcg 1405755
>dbj|AP004461.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0443G08 Length = 162139 Score = 46.1 bits (23), Expect = 0.081 Identities = 26/27 (96%) Strand = Plus / Minus Query: 333 tcgccgccggcgccggagacctcgtcg 359 |||||||||||||||| |||||||||| Sbjct: 87738 tcgccgccggcgccggcgacctcgtcg 87712
>dbj|AK109659.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-140-G02, full insert sequence Length = 1135 Score = 46.1 bits (23), Expect = 0.081 Identities = 26/27 (96%) Strand = Plus / Minus Query: 333 tcgccgccggcgccggagacctcgtcg 359 |||||||||||||||| |||||||||| Sbjct: 874 tcgccgccggcgccggcgacctcgtcg 848
>dbj|AK108406.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-142-G09, full insert sequence Length = 998 Score = 46.1 bits (23), Expect = 0.081 Identities = 23/23 (100%) Strand = Plus / Minus Query: 325 gttccccttcgccgccggcgccg 347 ||||||||||||||||||||||| Sbjct: 720 gttccccttcgccgccggcgccg 698
>gb|AY261359.1| Bovine herpesvirus 5 strain SV507/99, complete genome Length = 138390 Score = 44.1 bits (22), Expect = 0.32 Identities = 22/22 (100%) Strand = Plus / Minus Query: 124 cgccgacgccgtcgaggccgag 145 |||||||||||||||||||||| Sbjct: 5049 cgccgacgccgtcgaggccgag 5028
>emb|AJ719451.1| Gallus gallus mRNA for hypothetical protein, clone 2i1 Length = 3072 Score = 44.1 bits (22), Expect = 0.32 Identities = 28/30 (93%) Strand = Plus / Minus Query: 223 gcgcaccacgctgcgcgccgccgcggcggc 252 |||||||||||||| |||||||| |||||| Sbjct: 50 gcgcaccacgctgctcgccgccgtggcggc 21
>ref|NM_001006166.1| Gallus gallus transducin (beta)-like 3 (TBL3), mRNA Length = 3072 Score = 44.1 bits (22), Expect = 0.32 Identities = 28/30 (93%) Strand = Plus / Minus Query: 223 gcgcaccacgctgcgcgccgccgcggcggc 252 |||||||||||||| |||||||| |||||| Sbjct: 50 gcgcaccacgctgctcgccgccgtggcggc 21
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 44.1 bits (22), Expect = 0.32 Identities = 22/22 (100%) Strand = Plus / Minus Query: 231 cgctgcgcgccgccgcggcggc 252 |||||||||||||||||||||| Sbjct: 3247566 cgctgcgcgccgccgcggcggc 3247545 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 159 cgctctggcaggtctgcgcgg 179 ||||||||||||||||||||| Sbjct: 1208368 cgctctggcaggtctgcgcgg 1208388 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 181 cgcgtgcggggtggggccgg 200 |||||||||||||||||||| Sbjct: 3769559 cgcgtgcggggtggggccgg 3769540
>ref|XM_475946.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 894 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 118 ctcccgcgccgacgccgtcgaggcc 142 |||| |||||||||||||||||||| Sbjct: 585 ctccggcgccgacgccgtcgaggcc 609
>ref|XM_475424.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1842 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 332 ttcgccgccggcgccggagac 352 ||||||||||||||||||||| Sbjct: 330 ttcgccgccggcgccggagac 310
>ref|XM_473348.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 996 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 324 agttccccttcgccgccggcg 344 ||||||||||||||||||||| Sbjct: 5 agttccccttcgccgccggcg 25
>gb|AC137593.2| Oryza sativa (Japonica cultiva-group) chromosome 9 BAC clone OSJNBa0043I04, complete sequence Length = 145191 Score = 42.1 bits (21), Expect = 1.3 Identities = 30/33 (90%) Strand = Plus / Plus Query: 299 acccacgtgctccacaacaagcgcgagttcccc 331 |||||| ||||||||||||||| ||||||||| Sbjct: 16430 acccacatgctccacaacaagcaggagttcccc 16462
>gb|AC137596.2| Oryza sativa (japonica cultivar-group) chromosome 9 clone OSJNBb0031H05, complete sequence Length = 141200 Score = 42.1 bits (21), Expect = 1.3 Identities = 30/33 (90%) Strand = Plus / Plus Query: 299 acccacgtgctccacaacaagcgcgagttcccc 331 |||||| ||||||||||||||| ||||||||| Sbjct: 127036 acccacatgctccacaacaagcaggagttcccc 127068
>gb|AY657956.1| Synthetic construct Peudomonas aeruginosa clone FLH046244.01F PA1300 gene, partial cds Length = 528 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 230 acgctgcgcgccgccgcggcggcag 254 ||||| ||||||||||||||||||| Sbjct: 388 acgcttcgcgccgccgcggcggcag 364
>gb|AC098573.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1651_G11, complete sequence Length = 112796 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 118 ctcccgcgccgacgccgtcgaggcc 142 |||| |||||||||||||||||||| Sbjct: 56455 ctccggcgccgacgccgtcgaggcc 56431
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 231 cgctgcgcgccgccgcggcgg 251 ||||||||||||||||||||| Sbjct: 1792145 cgctgcgcgccgccgcggcgg 1792125
>gb|DQ177443.1| Pseudomonas sp. 10c-1-3 poly beta hydroxyalkanoate operon, complete sequence Length = 6421 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 124 cgccgacgccgtcgaggccga 144 ||||||||||||||||||||| Sbjct: 1773 cgccgacgccgtcgaggccga 1793
>gb|AC144737.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0018K15, complete sequence Length = 168519 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 332 ttcgccgccggcgccggagac 352 ||||||||||||||||||||| Sbjct: 80353 ttcgccgccggcgccggagac 80373
>gb|CP000089.1| Dechloromonas aromatica RCB, complete genome Length = 4501104 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 133 cgtcgaggccgaggcgttcga 153 ||||||||||||||||||||| Sbjct: 2540193 cgtcgaggccgaggcgttcga 2540213
>emb|AL939112.1|SCO939112 Streptomyces coelicolor A3(2) complete genome; segment 9/29 Length = 300800 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 40 ggacctcaccgtgcgcgacgcggcc 64 ||||||||||| ||||||||||||| Sbjct: 174640 ggacctcaccgcgcgcgacgcggcc 174664
>emb|AL606587.3|OSJN00022 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0011L07, complete sequence Length = 143585 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 324 agttccccttcgccgccggcg 344 ||||||||||||||||||||| Sbjct: 23233 agttccccttcgccgccggcg 23213
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 42.1 bits (21), Expect = 1.3 Identities = 30/33 (90%) Strand = Plus / Plus Query: 299 acccacgtgctccacaacaagcgcgagttcccc 331 |||||| ||||||||||||||| ||||||||| Sbjct: 21670410 acccacatgctccacaacaagcaggagttcccc 21670442
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 118 ctcccgcgccgacgccgtcgaggcc 142 |||| |||||||||||||||||||| Sbjct: 28737742 ctccggcgccgacgccgtcgaggcc 28737718 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 332 ttcgccgccggcgccggagac 352 ||||||||||||||||||||| Sbjct: 23394817 ttcgccgccggcgccggagac 23394837
>gb|AC137547.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0052J20, complete sequence Length = 144969 Score = 42.1 bits (21), Expect = 1.3 Identities = 45/53 (84%) Strand = Plus / Minus Query: 277 caacccgaccgccgtggccgtcacccacgtgctccacaacaagcgcgagttcc 329 |||||| ||||||| ||| ||||||| || ||||||||||||| ||||||| Sbjct: 22517 caaccccaccgccgccgccatcacccaagtcctccacaacaagcaggagttcc 22465
>gb|AE004559.1| Pseudomonas aeruginosa PAO1, section 120 of 529 of the complete genome Length = 10799 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 230 acgctgcgcgccgccgcggcggcag 254 ||||| ||||||||||||||||||| Sbjct: 6381 acgcttcgcgccgccgcggcggcag 6357
>dbj|AK100828.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023123A18, full insert sequence Length = 917 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 324 agttccccttcgccgccggcg 344 ||||||||||||||||||||| Sbjct: 67 agttccccttcgccgccggcg 87
>dbj|AK069820.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023028L03, full insert sequence Length = 1351 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 324 agttccccttcgccgccggcg 344 ||||||||||||||||||||| Sbjct: 67 agttccccttcgccgccggcg 87
>emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid complete sequence Length = 2094509 Score = 42.1 bits (21), Expect = 1.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 48 ccgtgcgcgacgcggccaagccgctgctg 76 |||||||| |||||||||||| ||||||| Sbjct: 1956366 ccgtgcgcaacgcggccaagcagctgctg 1956338 Score = 42.1 bits (21), Expect = 1.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 48 ccgtgcgcgacgcggccaagccgctgctg 76 |||||||| |||||||||||| ||||||| Sbjct: 1137534 ccgtgcgcaacgcggccaagcagctgctg 1137562
>dbj|AB085816.2| Pseudomonas putida phbC, phbA, phbB, flp, orf5 genes, complete cds Length = 8991 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 124 cgccgacgccgtcgaggccga 144 ||||||||||||||||||||| Sbjct: 1775 cgccgacgccgtcgaggccga 1795
>gb|AC126222.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0014I10, complete sequence Length = 113946 Score = 42.1 bits (21), Expect = 1.3 Identities = 45/53 (84%) Strand = Plus / Minus Query: 277 caacccgaccgccgtggccgtcacccacgtgctccacaacaagcgcgagttcc 329 |||||| ||||||| ||| ||||||| || ||||||||||||| ||||||| Sbjct: 103199 caaccccaccgccgccgccatcacccaagtcctccacaacaagcaggagttcc 103147
>dbj|AB032523.1| Streptomyces avermitilis avermectin biosynthetic gene cluster (orf1, aveBI, aveBII, aveBIII, aveBIV, aveBV, aveBVI, aveBVII, aveBVIII), complete cds Length = 9530 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 159 cgctctggcaggtctgcgcgg 179 ||||||||||||||||||||| Sbjct: 5695 cgctctggcaggtctgcgcgg 5715
>ref|NM_018949.1| Homo sapiens urotensin 2 receptor (UTS2R), mRNA Length = 1170 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 172 ctgcgcggccgcgtgcgggg 191 |||||||||||||||||||| Sbjct: 976 ctgcgcggccgcgtgcgggg 995
>ref|XM_473854.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1314 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 124 cgccgacgccgtcgaggccg 143 |||||||||||||||||||| Sbjct: 1180 cgccgacgccgtcgaggccg 1161
>ref|XM_472629.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2010 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 329 cccttcgccgccggcgccgg 348 |||||||||||||||||||| Sbjct: 259 cccttcgccgccggcgccgg 278
>gb|AY320035.2| Bacteriophage VWB, complete genome Length = 49220 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 127 cgacgccgtcgaggccgagg 146 |||||||||||||||||||| Sbjct: 32700 cgacgccgtcgaggccgagg 32719
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 121 ccgcgccgacgccgtcgaggccga 144 |||||||||||||| ||||||||| Sbjct: 979148 ccgcgccgacgccgccgaggccga 979171
>gb|BC015947.2| Homo sapiens potassium voltage-gated channel, delayed-rectifier, subfamily S, member 3, mRNA (cDNA clone MGC:9481 IMAGE:3919594), complete cds Length = 2354 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 238 cgccgccgcggcggcaggcg 257 |||||||||||||||||||| Sbjct: 32 cgccgccgcggcggcaggcg 51
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 121 ccgcgccgacgccgtcgaggccga 144 |||||||||||||| ||||||||| Sbjct: 2020908 ccgcgccgacgccgccgaggccga 2020931
>ref|NM_002252.3| Homo sapiens potassium voltage-gated channel, delayed-rectifier, subfamily S, member 3 (KCNS3), mRNA Length = 2344 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 238 cgccgccgcggcggcaggcg 257 |||||||||||||||||||| Sbjct: 22 cgccgccgcggcggcaggcg 41
>gb|AC122864.3| Mus musculus BAC clone RP23-142M19 from 6, complete sequence Length = 210148 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 354 tcgtcgtgctgtccctcggc 373 |||||||||||||||||||| Sbjct: 149808 tcgtcgtgctgtccctcggc 149827
>emb|X62666.1|PAXCPSP Pseudomonas aeruginosa genes xcpR, xcpS, xcpT, xcpU, xcpV, xcpW and xcpX for secretion proteins Length = 5940 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 231 cgctgcgcgccgccgcggcg 250 |||||||||||||||||||| Sbjct: 1877 cgctgcgcgccgccgcggcg 1896
>emb|BX548155.1|OSJN00293 Oryza sativa genomic DNA, chromosome 4, BAC clone: P0041A24, complete sequence Length = 50879 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 329 cccttcgccgccggcgccgg 348 |||||||||||||||||||| Sbjct: 27583 cccttcgccgccggcgccgg 27602
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 121 ccgcgccgacgccgtcgaggccga 144 |||||||||||||| ||||||||| Sbjct: 2355795 ccgcgccgacgccgccgaggccga 2355772
>emb|AL939104.1|SCO939104 Streptomyces coelicolor A3(2) complete genome; segment 1/29 Length = 299050 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 333 tcgccgccggcgccggagacctcg 356 |||||||||||||||| ||||||| Sbjct: 164675 tcgccgccggcgccggcgacctcg 164652
>emb|AL731610.4|OSJN00255 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0070C17, complete sequence Length = 160484 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 124 cgccgacgccgtcgaggccg 143 |||||||||||||||||||| Sbjct: 15027 cgccgacgccgtcgaggccg 15008
>emb|AL606684.3|OSJN00088 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0085I10, complete sequence Length = 150551 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 124 cgccgacgccgtcgaggccg 143 |||||||||||||||||||| Sbjct: 130320 cgccgacgccgtcgaggccg 130301
>gb|AY741555.1| Uncultured sulfate-reducing bacterium clone PIMO1A12 dissimilatory sulfite reductase alpha subunit (dsrA) and dissimilatory sulfite reductase beta subunit (dsrB) genes, partial cds Length = 1899 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 254 ggcgggaccggcgccggcgt 273 |||||||||||||||||||| Sbjct: 1519 ggcgggaccggcgccggcgt 1538
>gb|DQ397621.1| Cenarchaeum symbiosum clone C21E11, complete sequence Length = 41700 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 188 ggggtggggccggccgaggt 207 |||||||||||||||||||| Sbjct: 41171 ggggtggggccggccgaggt 41190
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 40.1 bits (20), Expect = 5.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 108 cgttcgtcttctcccgcgccgacgccgt 135 |||||| | ||||||||||||||||||| Sbjct: 4403093 cgttcggcatctcccgcgccgacgccgt 4403120
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 51 tgcgcgacgcggccaagccg 70 |||||||||||||||||||| Sbjct: 867540 tgcgcgacgcggccaagccg 867521
>ref|NM_135845.2| Drosophila melanogaster CG16885-RA, transcript variant A (CG16885), mRNA Length = 1344 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 285 ccgccgtggccgtcacccac 304 |||||||||||||||||||| Sbjct: 729 ccgccgtggccgtcacccac 748
>gb|AY070658.1| Drosophila melanogaster RH04334 full length cDNA Length = 1348 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 285 ccgccgtggccgtcacccac 304 |||||||||||||||||||| Sbjct: 729 ccgccgtggccgtcacccac 748
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 223 gcgcaccacgctgcgcgccg 242 |||||||||||||||||||| Sbjct: 3247874 gcgcaccacgctgcgcgccg 3247893 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 233 ctgcgcgccgccgcggcggc 252 |||||||||||||||||||| Sbjct: 985550 ctgcgcgccgccgcggcggc 985531
>gb|AF273029.1|AF273029 Desulfotomaculum geothermicum dissimilatory sulfite reductase alpha subunit (dsrA) and dissimilatory sulfite reductase beta subunit (dsrB) genes, partial cds Length = 1884 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 254 ggcgggaccggcgccggcgt 273 |||||||||||||||||||| Sbjct: 1525 ggcgggaccggcgccggcgt 1544
>gb|AC092243.1|AC092243 Drosophila melanogaster, chromosome 2L, region 34D-34E, BAC clone BACR09N24, complete sequence Length = 158758 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 285 ccgccgtggccgtcacccac 304 |||||||||||||||||||| Sbjct: 143279 ccgccgtggccgtcacccac 143298
>gb|AC092223.1|AC092223 Drosophila melanogaster, chromosome 2L, region 34D-35X, BAC clone BACR16P12, complete sequence Length = 171598 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 285 ccgccgtggccgtcacccac 304 |||||||||||||||||||| Sbjct: 130296 ccgccgtggccgtcacccac 130277
>gb|AC091529.1|AC091529 Homo sapiens chromosome 17 clone 1005, complete sequence Length = 157463 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 187 cggggtggggccggccgaggtggc 210 |||||||||||||| ||||||||| Sbjct: 93106 cggggtggggccgggcgaggtggc 93129
>gb|AF510687.1| Uncultured bacterium clone W6-38-26b DsrB-like gene, partial sequence Length = 608 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 254 ggcgggaccggcgccggcgt 273 |||||||||||||||||||| Sbjct: 215 ggcgggaccggcgccggcgt 234
>gb|AF510678.1| Uncultured bacterium clone E5-46-12b DsrB-like gene, partial sequence Length = 545 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 254 ggcgggaccggcgccggcgt 273 |||||||||||||||||||| Sbjct: 153 ggcgggaccggcgccggcgt 172
>gb|AF510677.1| Uncultured bacterium clone E5-46-11b DsrB-like gene, partial sequence Length = 574 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 254 ggcgggaccggcgccggcgt 273 |||||||||||||||||||| Sbjct: 183 ggcgggaccggcgccggcgt 202
>gb|AF510673.1| Uncultured bacterium clone E5-46-1b DsrB-like gene, partial sequence Length = 722 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 254 ggcgggaccggcgccggcgt 273 |||||||||||||||||||| Sbjct: 341 ggcgggaccggcgccggcgt 360
>dbj|AB071093.1| Macaca fascicularis testis cDNA clone:QtsA-17841, similar to human transient receptor potential cation channel (TRPV3 ), mRNA, NM_145068.2 Length = 1642 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 255 gcgggaccggcgccggcgtg 274 |||||||||||||||||||| Sbjct: 897 gcgggaccggcgccggcgtg 916
>gb|AC134234.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0019J12, complete sequence Length = 195583 Score = 40.1 bits (20), Expect = 5.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 102 ccgcgccgttcgtcttctcccgcgccgacgcc 133 |||||||| |||| ||||| |||||||||||| Sbjct: 55998 ccgcgccgctcgtgttctcgcgcgccgacgcc 56029
>gb|AC132938.9| Homo sapiens chromosome 17, clone RP13-20L14, complete sequence Length = 154252 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 172 ctgcgcggccgcgtgcgggg 191 |||||||||||||||||||| Sbjct: 91619 ctgcgcggccgcgtgcgggg 91600
>gb|AE004734.1| Pseudomonas aeruginosa PAO1, section 295 of 529 of the complete genome Length = 11120 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 231 cgctgcgcgccgccgcggcg 250 |||||||||||||||||||| Sbjct: 6369 cgctgcgcgccgccgcggcg 6350
>gb|AC093731.2| Homo sapiens BAC clone RP11-12L16 from 2, complete sequence Length = 190686 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 238 cgccgccgcggcggcaggcg 257 |||||||||||||||||||| Sbjct: 123629 cgccgccgcggcggcaggcg 123648
>dbj|AP005292.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1340_C08 Length = 192167 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 121 ccgcgccgacgccgtcgagg 140 |||||||||||||||||||| Sbjct: 18785 ccgcgccgacgccgtcgagg 18804
>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome Length = 3147090 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 124 cgccgacgccgtcgaggccg 143 |||||||||||||||||||| Sbjct: 2959863 cgccgacgccgtcgaggccg 2959844
>dbj|AP005105.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0052O11 Length = 106467 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 227 accacgctgcgcgccgccgcggcg 250 |||||| ||||||||||||||||| Sbjct: 90106 accacggtgcgcgccgccgcggcg 90083
>dbj|AP004573.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0678G09 Length = 139220 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 227 accacgctgcgcgccgccgcggcg 250 |||||| ||||||||||||||||| Sbjct: 56395 accacggtgcgcgccgccgcggcg 56372
>dbj|AK108605.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-146-G10, full insert sequence Length = 1615 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 333 tcgccgccggcgccggagac 352 |||||||||||||||||||| Sbjct: 326 tcgccgccggcgccggagac 345
>dbj|AK100533.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023101L24, full insert sequence Length = 2426 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 329 cccttcgccgccggcgccgg 348 |||||||||||||||||||| Sbjct: 518 cccttcgccgccggcgccgg 537
>gb|AC006449.19|AC006449 Homo sapiens chromosome 17, clone hCIT.58_E_17, complete sequence Length = 286758 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 187 cggggtggggccggccgaggtggc 210 |||||||||||||| ||||||||| Sbjct: 56028 cggggtggggccgggcgaggtggc 56051
>gb|AF140631.1|AF140631 Homo sapiens G-protein coupled receptor 14 (GPR14) gene, complete cds Length = 1170 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 172 ctgcgcggccgcgtgcgggg 191 |||||||||||||||||||| Sbjct: 976 ctgcgcggccgcgtgcgggg 995
>gb|AE003641.3| Drosophila melanogaster chromosome 2L, section 50 of 83 of the complete sequence Length = 304772 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 285 ccgccgtggccgtcacccac 304 |||||||||||||||||||| Sbjct: 279668 ccgccgtggccgtcacccac 279649
>gb|AC116115.11| Mus musculus chromosome 6, clone RP23-60P18, complete sequence Length = 215571 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 354 tcgtcgtgctgtccctcggc 373 |||||||||||||||||||| Sbjct: 461 tcgtcgtgctgtccctcggc 480
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome Length = 6181863 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 115 cttctcccgcgccgacgccg 134 |||||||||||||||||||| Sbjct: 1067606 cttctcccgcgccgacgccg 1067587
>gb|AC167667.4| Culex pipiens quinquefasciatus, clone Culex pipiens quinquefasciatus-3940123D9, complete sequence Length = 121336 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 334 cgccgccggcgccggagacc 353 |||||||||||||||||||| Sbjct: 64555 cgccgccggcgccggagacc 64536
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 121 ccgcgccgacgccgtcgaggccga 144 |||||||||||||| ||||||||| Sbjct: 2996033 ccgcgccgacgccgccgaggccga 2996010
>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence Length = 2648638 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 284 accgccgtggccgtcaccca 303 |||||||||||||||||||| Sbjct: 1220721 accgccgtggccgtcaccca 1220740
>gb|U37008.1|MXU37008 Myxococcus xanthus socD (socD500 allele) and kefC genes, complete cds Length = 3780 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 232 gctgcgcgccgccgcggcgg 251 |||||||||||||||||||| Sbjct: 899 gctgcgcgccgccgcggcgg 918
>gb|DQ250765.1| Uncultured sulfate-reducing bacterium clone G-5 dissimilatory sulfite reductase alpha subunit (dsrA) gene, partial cds Length = 659 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 257 gggaccggcgccggcgtggccaac 280 |||||||||||||||||| ||||| Sbjct: 304 gggaccggcgccggcgtgaccaac 327
>dbj|AB034704.1| Rubrivivax gelatinosus photosynthetic gene cluster, complete cds, stain:IL144 Length = 58996 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 cgtgcgcgacgcggccaagc 68 |||||||||||||||||||| Sbjct: 36874 cgtgcgcgacgcggccaagc 36855 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,744,780 Number of Sequences: 3902068 Number of extensions: 2744780 Number of successful extensions: 78205 Number of sequences better than 10.0: 111 Number of HSP's better than 10.0 without gapping: 126 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 69856 Number of HSP's gapped (non-prelim): 8345 length of query: 373 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 351 effective length of database: 17,147,199,772 effective search space: 6018667119972 effective search space used: 6018667119972 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
