| Clone Name | bast79e07 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | Y5621_ARATH (O81488) PHD finger protein At5g26210 | 166 | 3e-41 | 2 | CAN12_MOUSE (Q9ER56) Calpain-12 (EC 3.4.22.-) | 29 | 5.4 | 3 | CG21_CANAL (P47829) G2/mitotic-specific cyclin CYB1 | 29 | 5.4 | 4 | CAH1_FLALI (P46512) Carbonic anhydrase 1 (EC 4.2.1.1) (Carbonate... | 28 | 9.2 | 5 | B3GT3_RAT (Q6AY39) Beta-1,3-galactosyltransferase 3 (EC 2.4.1.79... | 28 | 9.2 |
|---|
>Y5621_ARATH (O81488) PHD finger protein At5g26210| Length = 255 Score = 166 bits (420), Expect = 3e-41 Identities = 80/110 (72%), Positives = 88/110 (80%) Frame = +2 Query: 143 AGGAYVARTAEEVFRDLRGRRAGMIKALTEDVDKFFKLCDPEKENLCLYGYPNETWEVTL 322 AGGAY RT EEVFRD +GRRAGMIKALT DV +FF+LCDPEKENLCLYG+PNE WEV L Sbjct: 3 AGGAYNPRTVEEVFRDFKGRRAGMIKALTTDVQEFFRLCDPEKENLCLYGHPNEHWEVNL 62 Query: 323 XXXXXXXXXXXXXLGINFARDGMNEKDWLALVAVHSDSWLLSVAFYFGAR 472 LGINFARDGM EKDWL+LVAVHSD+WLL+VAF+FGAR Sbjct: 63 PAEEVPPELPEPVLGINFARDGMAEKDWLSLVAVHSDAWLLAVAFFFGAR 112
>CAN12_MOUSE (Q9ER56) Calpain-12 (EC 3.4.22.-)| Length = 720 Score = 29.3 bits (64), Expect = 5.4 Identities = 9/15 (60%), Positives = 12/15 (80%) Frame = -1 Query: 355 FRDLWGHFLSWQGHF 311 F++LWGH +SWQ F Sbjct: 616 FQELWGHLMSWQATF 630
>CG21_CANAL (P47829) G2/mitotic-specific cyclin CYB1| Length = 492 Score = 29.3 bits (64), Expect = 5.4 Identities = 15/54 (27%), Positives = 26/54 (48%) Frame = -2 Query: 273 SFSGSQSLKNLSTSSVRALIMPARRPRRSRKTSSAVRATYAPPAPAPSMGGRRQ 112 S S S + N + + +L +P+R P++ + T S+ P P +G R Q Sbjct: 122 SSSNSSNNNNNDANRLASLAVPSRLPQKRQATESSTNLVEKLRVPQPEVGERSQ 175
>CAH1_FLALI (P46512) Carbonic anhydrase 1 (EC 4.2.1.1) (Carbonate dehydratase| 1) Length = 330 Score = 28.5 bits (62), Expect = 9.2 Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 8/53 (15%) Frame = -2 Query: 273 SFSGSQSLKNLSTSSVRALIMPARRPRRSRKTSSAV--------RATYAPPAP 139 SF + SLK STSS R+ ++ AR S +SS+ +A PAP Sbjct: 13 SFVNASSLKKSSTSSARSGVLSARFTCNSSSSSSSATPPSLIRNEPVFAAPAP 65
>B3GT3_RAT (Q6AY39) Beta-1,3-galactosyltransferase 3 (EC 2.4.1.79)| (Beta-1,3-GalTase 3) (Beta3Gal-T3) (b3Gal-T3) (Galactosylgalactosylglucosylceramide beta-D-acetyl-galactosaminyltransferase) (UDP-N-acetylgalactosamine:globotriaosylceramide beta-1,3-N-ace Length = 331 Score = 28.5 bits (62), Expect = 9.2 Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 2/39 (5%) Frame = -1 Query: 424 NCN*RQP--ILLIHSIPSEVDS*CWFRDLWGHFLSWQGH 314 NC+ + P ++L+ S PS+V + R WG +W GH Sbjct: 72 NCSQQNPFLVILVTSRPSDVKARQAIRVTWGEKKTWWGH 110 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 44,896,343 Number of Sequences: 219361 Number of extensions: 796606 Number of successful extensions: 2672 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 2603 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2668 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3130907202 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)