| Clone Name | bast79e05 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY108356.1| Zea mays PCO102545 mRNA sequence Length = 1393 Score = 262 bits (132), Expect = 1e-66 Identities = 183/200 (91%) Strand = Plus / Plus Query: 268 acaaggaacctctctccgccttagcagcagagttccagtctggcagccccattttacagg 327 ||||||||||||||||| | |||||||| ||||| ||||||||||||||||||||||| | Sbjct: 415 acaaggaacctctctcctctttagcagctgagtttcagtctggcagccccattttacaag 474 Query: 328 agaaaataaagttgcttggtgaacaatatgatgctttaagacggacacgaggagatggaa 387 ||||||| ||||||||||| || ||||||| |||||||||||| ||||| |||||||||| Sbjct: 475 agaaaattaagttgcttggcgagcaatatggtgctttaagacgtacacgtggagatggaa 534 Query: 388 actgcttttatcgaagctttatgttctcctacctggaacatatccttgagacacaagaca 447 ||||||||||||||||||||||||| |||||||||||||| ||||| ||||||||||||| Sbjct: 535 actgcttttatcgaagctttatgttttcctacctggaacacatcctagagacacaagaca 594 Query: 448 gagctgaggttgagcgcatc 467 |||||||| ||| |||||| Sbjct: 595 aagctgaggctgatcgcatc 614 Score = 109 bits (55), Expect = 9e-21 Identities = 61/63 (96%) Strand = Plus / Plus Query: 72 cgcgaagctggcgcgggaggcggccgacgcgagcgcccgcaagcgcaaggcggcggacgg 131 ||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 83 cgcgaagctggcgcgcgaggcggccgacgcgagcgcccgcaagcgcaaggcgggggacgg 142 Query: 132 cgg 134 ||| Sbjct: 143 cgg 145 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 163 gaggacgcggccatgggcgacg 184 |||||||||||||||||||||| Sbjct: 201 gaggacgcggccatgggcgacg 222
>ref|XM_483544.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1012 Score = 192 bits (97), Expect = 7e-46 Identities = 115/121 (95%) Strand = Plus / Plus Query: 354 tatgatgctttaagacggacacgaggagatggaaactgcttttatcgaagctttatgttc 413 ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3 tatgatgctttaagaaggacacgaggagatggaaactgcttttatcgaagctttatgttt 62 Query: 414 tcctacctggaacatatccttgagacacaagacagagctgaggttgagcgcatcctaaaa 473 |||||| ||||||||||||| ||||||||||||| |||||||||||||||||| |||||| Sbjct: 63 tcctacttggaacatatcctagagacacaagacaaagctgaggttgagcgcattctaaaa 122 Query: 474 a 474 | Sbjct: 123 a 123
>dbj|AK059388.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-026-H03, full insert sequence Length = 1012 Score = 192 bits (97), Expect = 7e-46 Identities = 115/121 (95%) Strand = Plus / Plus Query: 354 tatgatgctttaagacggacacgaggagatggaaactgcttttatcgaagctttatgttc 413 ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3 tatgatgctttaagaaggacacgaggagatggaaactgcttttatcgaagctttatgttt 62 Query: 414 tcctacctggaacatatccttgagacacaagacagagctgaggttgagcgcatcctaaaa 473 |||||| ||||||||||||| ||||||||||||| |||||||||||||||||| |||||| Sbjct: 63 tcctacttggaacatatcctagagacacaagacaaagctgaggttgagcgcattctaaaa 122 Query: 474 a 474 | Sbjct: 123 a 123
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 141 bits (71), Expect = 2e-30 Identities = 80/83 (96%) Strand = Plus / Minus Query: 337 agttgcttggtgaacaatatgatgctttaagacggacacgaggagatggaaactgctttt 396 |||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 26878599 agttgcttggtgaacagtatgatgctttaagaaggacacgaggagatggaaactgctttt 26878540 Query: 397 atcgaagctttatgttctcctac 419 |||||||||||||||| |||||| Sbjct: 26878539 atcgaagctttatgttttcctac 26878517 Score = 125 bits (63), Expect = 1e-25 Identities = 66/67 (98%) Strand = Plus / Minus Query: 68 cacacgcgaagctggcgcgggaggcggccgacgcgagcgcccgcaagcgcaaggcggcgg 127 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 26880322 cacacgcgaagctggcgcgggaggcggccgacgcgagcgcccggaagcgcaaggcggcgg 26880263 Query: 128 acggcgg 134 ||||||| Sbjct: 26880262 acggcgg 26880256 Score = 95.6 bits (48), Expect = 1e-16 Identities = 63/68 (92%) Strand = Plus / Minus Query: 271 aggaacctctctccgccttagcagcagagttccagtctggcagccccattttacaggaga 330 |||||||||||||| | ||||| || ||||| |||||||||||||||||||||||||||| Sbjct: 26878775 aggaacctctctccactttagccgccgagtttcagtctggcagccccattttacaggaga 26878716 Query: 331 aaataaag 338 |||||||| Sbjct: 26878715 aaataaag 26878708 Score = 81.8 bits (41), Expect = 2e-12 Identities = 50/53 (94%) Strand = Plus / Minus Query: 422 ggaacatatccttgagacacaagacagagctgaggttgagcgcatcctaaaaa 474 |||||||||||| ||||||||||||| |||||||||||||||||| ||||||| Sbjct: 26878441 ggaacatatcctagagacacaagacaaagctgaggttgagcgcattctaaaaa 26878389 Score = 48.1 bits (24), Expect = 0.027 Identities = 30/32 (93%) Strand = Plus / Minus Query: 194 cggcccccgcgccgctcgtcgaggggggagga 225 ||||||||| |||| ||||||||||||||||| Sbjct: 26880187 cggcccccgagccggtcgtcgaggggggagga 26880156
>dbj|AP004464.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0665C04 Length = 177054 Score = 141 bits (71), Expect = 2e-30 Identities = 80/83 (96%) Strand = Plus / Minus Query: 337 agttgcttggtgaacaatatgatgctttaagacggacacgaggagatggaaactgctttt 396 |||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 141389 agttgcttggtgaacagtatgatgctttaagaaggacacgaggagatggaaactgctttt 141330 Query: 397 atcgaagctttatgttctcctac 419 |||||||||||||||| |||||| Sbjct: 141329 atcgaagctttatgttttcctac 141307 Score = 125 bits (63), Expect = 1e-25 Identities = 66/67 (98%) Strand = Plus / Minus Query: 68 cacacgcgaagctggcgcgggaggcggccgacgcgagcgcccgcaagcgcaaggcggcgg 127 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 143112 cacacgcgaagctggcgcgggaggcggccgacgcgagcgcccggaagcgcaaggcggcgg 143053 Query: 128 acggcgg 134 ||||||| Sbjct: 143052 acggcgg 143046 Score = 95.6 bits (48), Expect = 1e-16 Identities = 63/68 (92%) Strand = Plus / Minus Query: 271 aggaacctctctccgccttagcagcagagttccagtctggcagccccattttacaggaga 330 |||||||||||||| | ||||| || ||||| |||||||||||||||||||||||||||| Sbjct: 141565 aggaacctctctccactttagccgccgagtttcagtctggcagccccattttacaggaga 141506 Query: 331 aaataaag 338 |||||||| Sbjct: 141505 aaataaag 141498 Score = 81.8 bits (41), Expect = 2e-12 Identities = 50/53 (94%) Strand = Plus / Minus Query: 422 ggaacatatccttgagacacaagacagagctgaggttgagcgcatcctaaaaa 474 |||||||||||| ||||||||||||| |||||||||||||||||| ||||||| Sbjct: 141231 ggaacatatcctagagacacaagacaaagctgaggttgagcgcattctaaaaa 141179 Score = 48.1 bits (24), Expect = 0.027 Identities = 30/32 (93%) Strand = Plus / Minus Query: 194 cggcccccgcgccgctcgtcgaggggggagga 225 ||||||||| |||| ||||||||||||||||| Sbjct: 142977 cggcccccgagccggtcgtcgaggggggagga 142946
>emb|AJ718151.1| Nicotiana tabacum cDNA-AFLP-fragment BSTT31-4-420, cultivar Bright Yellow 2 Length = 381 Score = 54.0 bits (27), Expect = 4e-04 Identities = 60/71 (84%) Strand = Plus / Plus Query: 326 ggagaaaataaagttgcttggtgaacaatatgatgctttaagacggacacgaggagatgg 385 ||||||||||||| |||| |||||||||||| ||| | ||| | ||||| |||||||| Sbjct: 241 ggagaaaataaaggtgctgagtgaacaatatgctgcccttagaagaacacgtggagatgg 300 Query: 386 aaactgctttt 396 ||| ||||||| Sbjct: 301 aaattgctttt 311
>emb|AJ718144.1| Nicotiana tabacum cDNA-AFLP-fragment BSTT31-3-380, cultivar Bright Yellow 2 Length = 319 Score = 54.0 bits (27), Expect = 4e-04 Identities = 60/71 (84%) Strand = Plus / Plus Query: 326 ggagaaaataaagttgcttggtgaacaatatgatgctttaagacggacacgaggagatgg 385 ||||||||||||| |||| |||||||||||| ||| | ||| | ||||| |||||||| Sbjct: 217 ggagaaaataaaggtgctgagtgaacaatatgctgcccttagaagaacacgtggagatgg 276 Query: 386 aaactgctttt 396 ||| ||||||| Sbjct: 277 aaattgctttt 287
>ref|NM_102577.2| Arabidopsis thaliana unknown protein AT1G28120 mRNA, complete cds Length = 1371 Score = 46.1 bits (23), Expect = 0.11 Identities = 47/55 (85%) Strand = Plus / Plus Query: 376 gaggagatggaaactgcttttatcgaagctttatgttctcctacctggaacatat 430 ||||||||||||| ||||| | ||||| ||||||||||| ||||| || ||||| Sbjct: 456 gaggagatggaaattgcttcttccgaagttttatgttctcttaccttgagcatat 510
>gb|AC165974.4| Mus musculus BAC clone RP23-16J4 from chromosome 6, complete sequence Length = 237816 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 53 ccccacccacccacccacacgcg 75 ||||||||||||||||||||||| Sbjct: 28701 ccccacccacccacccacacgcg 28723
>gb|AC124398.4| Mus musculus BAC clone RP24-349M24 from chromosome 12, complete sequence Length = 176369 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 50 catccccacccacccacccacac 72 ||||||||||||||||||||||| Sbjct: 161700 catccccacccacccacccacac 161722
>gb|AC125092.4| Mus musculus BAC clone RP24-174F18 from chromosome 12, complete sequence Length = 178746 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 50 catccccacccacccacccacac 72 ||||||||||||||||||||||| Sbjct: 148946 catccccacccacccacccacac 148924
>gb|BT000164.1| Arabidopsis thaliana expressed protein (At1g28120) mRNA, complete cds Length = 1007 Score = 46.1 bits (23), Expect = 0.11 Identities = 47/55 (85%) Strand = Plus / Plus Query: 376 gaggagatggaaactgcttttatcgaagctttatgttctcctacctggaacatat 430 ||||||||||||| ||||| | ||||| ||||||||||| ||||| || ||||| Sbjct: 260 gaggagatggaaattgcttcttccgaagttttatgttctcttaccttgagcatat 314
>gb|AY136373.1| Arabidopsis thaliana expressed protein (At1g28120) mRNA, complete cds Length = 1369 Score = 46.1 bits (23), Expect = 0.11 Identities = 47/55 (85%) Strand = Plus / Plus Query: 376 gaggagatggaaactgcttttatcgaagctttatgttctcctacctggaacatat 430 ||||||||||||| ||||| | ||||| ||||||||||| ||||| || ||||| Sbjct: 458 gaggagatggaaattgcttcttccgaagttttatgttctcttaccttgagcatat 512
>gb|AC090647.6| Genomic sequence for Mus musculus, clone RP23-252I12, complete sequence Length = 139891 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 43 tgacacccatccccacccacccaccca 69 ||||||||| ||||||||||||||||| Sbjct: 51954 tgacacccacccccacccacccaccca 51928
>emb|BX815298.1|CNS0ADV4 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS4ZH01 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1267 Score = 46.1 bits (23), Expect = 0.11 Identities = 47/55 (85%) Strand = Plus / Plus Query: 376 gaggagatggaaactgcttttatcgaagctttatgttctcctacctggaacatat 430 ||||||||||||| ||||| | ||||| ||||||||||| ||||| || ||||| Sbjct: 412 gaggagatggaaattgcttcttccgaagttttatgttctcttaccttgagcatat 466
>gb|AY084389.1| Arabidopsis thaliana clone 106626 mRNA, complete sequence Length = 1331 Score = 46.1 bits (23), Expect = 0.11 Identities = 47/55 (85%) Strand = Plus / Plus Query: 376 gaggagatggaaactgcttttatcgaagctttatgttctcctacctggaacatat 430 ||||||||||||| ||||| | ||||| ||||||||||| ||||| || ||||| Sbjct: 456 gaggagatggaaattgcttcttccgaagttttatgttctcttaccttgagcatat 510
>gb|AC099741.4| Mus musculus strain C57BL6/J chromosome 6 clone RP23-92M3, complete sequence Length = 249636 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 49 ccatccccacccacccacccac 70 |||||||||||||||||||||| Sbjct: 44328 ccatccccacccacccacccac 44307
>gb|AC122409.4| Mus musculus BAC clone RP24-140P18 from chromosome 8, complete sequence Length = 178068 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Minus Query: 45 acacccatccccacccacccacccac 70 |||||||| ||||||||||||||||| Sbjct: 130464 acacccatgcccacccacccacccac 130439
>gb|AC120408.7| Mus musculus chromosome 5, clone RP24-433N14, complete sequence Length = 178077 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 48 cccatccccacccacccaccca 69 |||||||||||||||||||||| Sbjct: 108228 cccatccccacccacccaccca 108207
>gb|AC121977.3| Mus musculus BAC clone RP24-287A16 from chromosome 6, complete sequence Length = 186279 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 49 ccatccccacccacccacccac 70 |||||||||||||||||||||| Sbjct: 148734 ccatccccacccacccacccac 148713
>gb|AC157761.6| Mus musculus chromosome 5, clone RP23-446J15, complete sequence Length = 177868 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 48 cccatccccacccacccaccca 69 |||||||||||||||||||||| Sbjct: 16245 cccatccccacccacccaccca 16266
>emb|AL121888.20|HS1050C22 Human DNA sequence from clone RP5-1050C22 on chromosome 20 Contains ESTs, STSs and GSSs, complete sequence Length = 136931 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 50 catccccacccacccacccaca 71 |||||||||||||||||||||| Sbjct: 13211 catccccacccacccacccaca 13232
>gb|AC164626.6| Mus musculus 6 BAC RP23-472D18 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 190308 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 49 ccatccccacccacccacccac 70 |||||||||||||||||||||| Sbjct: 30677 ccatccccacccacccacccac 30698
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 44.1 bits (22), Expect = 0.42 Identities = 28/30 (93%) Strand = Plus / Plus Query: 71 acgcgaagctggcgcgggaggcggccgacg 100 |||||| |||||| |||||||||||||||| Sbjct: 8203389 acgcgatgctggcacgggaggcggccgacg 8203418 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 48 cccatccccacccacccaccc 68 ||||||||||||||||||||| Sbjct: 12148343 cccatccccacccacccaccc 12148323
>gb|AC069471.4|AC069471 Arabidopsis thaliana chromosome 1 BAC F13K9 genomic sequence, complete sequence Length = 126991 Score = 44.1 bits (22), Expect = 0.42 Identities = 40/46 (86%) Strand = Plus / Minus Query: 376 gaggagatggaaactgcttttatcgaagctttatgttctcctacct 421 ||||||||||||| ||||| | ||||| ||||||||||| ||||| Sbjct: 100989 gaggagatggaaattgcttcttccgaagttttatgttctcttacct 100944
>dbj|AP005687.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0019B22 Length = 137457 Score = 44.1 bits (22), Expect = 0.42 Identities = 28/30 (93%) Strand = Plus / Plus Query: 71 acgcgaagctggcgcgggaggcggccgacg 100 |||||| |||||| |||||||||||||||| Sbjct: 126814 acgcgatgctggcacgggaggcggccgacg 126843
>dbj|AP005586.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0450F09 Length = 148752 Score = 44.1 bits (22), Expect = 0.42 Identities = 28/30 (93%) Strand = Plus / Plus Query: 71 acgcgaagctggcgcgggaggcggccgacg 100 |||||| |||||| |||||||||||||||| Sbjct: 27311 acgcgatgctggcacgggaggcggccgacg 27340
>gb|AY108865.1| Zea mays PCO075691 mRNA sequence Length = 425 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 142 ggcgccgcggccccggcccccg 163 |||||||||||||||||||||| Sbjct: 387 ggcgccgcggccccggcccccg 366
>gb|AC105298.21| Mus musculus strain C57BL/6J chromosome 5 clone rp23-224j9, complete sequence Length = 258789 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 48 cccatccccacccacccaccca 69 |||||||||||||||||||||| Sbjct: 202002 cccatccccacccacccaccca 202023
>emb|AL606921.6| Mouse DNA sequence from clone RP23-209C6 on chromosome 4, complete sequence Length = 173639 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 48 cccatccccacccacccaccca 69 |||||||||||||||||||||| Sbjct: 30505 cccatccccacccacccaccca 30526
>gb|AC102219.11| Mus musculus chromosome 15, clone RP24-96K14, complete sequence Length = 194425 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 52 tccccacccacccacccacac 72 ||||||||||||||||||||| Sbjct: 131754 tccccacccacccacccacac 131734
>gb|AC124127.12| Mus musculus chromosome 19, clone RP23-150N4, complete sequence Length = 194548 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 377 aggagatggaaactgctttta 397 ||||||||||||||||||||| Sbjct: 2157 aggagatggaaactgctttta 2137
>gb|AC126115.5| Rattus norvegicus 4 BAC CH230-213L22 (Children's Hospital Oakland Research Institute) complete sequence Length = 214442 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 52 tccccacccacccacccacac 72 ||||||||||||||||||||| Sbjct: 64842 tccccacccacccacccacac 64862
>gb|AC129608.3| Mus musculus BAC clone RP23-193A2 from chromosome 5, complete sequence Length = 240180 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 48 cccatccccacccacccacccacac 72 |||| |||||||||||||||||||| Sbjct: 11160 cccacccccacccacccacccacac 11136
>gb|AC036146.10| Mus musculus chromosome 5, clone RP23-294A15, complete sequence Length = 196168 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 48 cccatccccacccacccacccacac 72 |||| |||||||||||||||||||| Sbjct: 120514 cccacccccacccacccacccacac 120538
>gb|AC159209.2| Mus musculus BAC clone RP23-100C6 from chromosome 13, complete sequence Length = 212761 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 52 tccccacccacccacccacac 72 ||||||||||||||||||||| Sbjct: 92166 tccccacccacccacccacac 92146
>gb|AC167719.2| Mus musculus BAC clone RP24-285I8 from chromosome 10, complete sequence Length = 180573 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 50 catccccacccacccacccac 70 ||||||||||||||||||||| Sbjct: 176996 catccccacccacccacccac 177016
>gb|AC113961.14| Mus musculus chromosome 19, clone RP23-18G1, complete sequence Length = 256791 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 377 aggagatggaaactgctttta 397 ||||||||||||||||||||| Sbjct: 146872 aggagatggaaactgctttta 146852
>gb|AC127240.3| Mus musculus BAC clone RP24-387H11 from chromosome 8, complete sequence Length = 212579 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 48 cccatccccacccacccacccacac 72 ||||| ||||||||||||||||||| Sbjct: 153893 cccatacccacccacccacccacac 153869
>gb|AC133190.2| Mus musculus BAC clone RP23-375H9 from chromosome 10, complete sequence Length = 151273 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 50 catccccacccacccacccac 70 ||||||||||||||||||||| Sbjct: 93950 catccccacccacccacccac 93970
>gb|AF060871.1| Rhodococcus rhodochrous plasmid pRTL1 insertion sequence IS2112 putative transposase (tnpA), putative site specific recombinase (invA), haloalkane dehalogenase (dhaA), hypothetical alcohol dehydrogenase, and hypothetical aldehyde dehydrogenase precursor, genes, complete cds Length = 13151 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 140 ccggcgccgcggccccggccc 160 ||||||||||||||||||||| Sbjct: 7080 ccggcgccgcggccccggccc 7060
>emb|AL671518.3| Human DNA sequence from clone RP11-315C6 on chromosome 6 Contains the 5' end of the WASF1 gene for WAS protein family member 1, the gene for pre-mRNA splicing factor 17 (PRP17, EH binding protein 3, EHB3, CDC40), a novel gene and a CpG island, complete sequence Length = 67395 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 49 ccatccccacccacccaccca 69 ||||||||||||||||||||| Sbjct: 25418 ccatccccacccacccaccca 25438
>gb|AC161529.4| Mus musculus chromosome 5, clone RP24-316L21, complete sequence Length = 184502 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 48 cccatccccacccacccacccacac 72 |||| |||||||||||||||||||| Sbjct: 93262 cccacccccacccacccacccacac 93238
>gb|AC127142.3| Rattus norvegicus 4 BAC CH230-41K13 (Children's Hospital Oakland Research Institute) complete sequence Length = 238669 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 52 tccccacccacccacccacac 72 ||||||||||||||||||||| Sbjct: 6139 tccccacccacccacccacac 6119
>ref|XM_966895.1| PREDICTED: Tribolium castaneum similar to A kinase (PRKA) anchor protein 10 (LOC660682), mRNA Length = 1754 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 144 cgccgcggccccggcccccga 164 ||||||||||||||||||||| Sbjct: 182 cgccgcggccccggcccccga 202
>emb|X80328.1|MMH2B143 M.musculus genes H2b-143, H3-143 Length = 3210 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 323 acaggagaaaataaagttgct 343 ||||||||||||||||||||| Sbjct: 262 acaggagaaaataaagttgct 242
>gb|AC160970.7| Mus musculus BAC clone RP24-492D11 from chromosome 10, complete sequence Length = 205283 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 50 catccccacccacccacccac 70 ||||||||||||||||||||| Sbjct: 21454 catccccacccacccacccac 21474
>emb|AL590388.4| Mouse DNA sequence from clone RP23-480B19 on chromosome 13 Contains the Slc17a1 gene for solute carrier family 17 (vesicular glutamate transporter) member 1, two genes for novel solute carrier family 17 (Slc17) members, two novel genes, the gene for a novel C3HC4 type zinc finger (ring finger) protein, the gene for an H2a, an H2b, two genes for H3 and two genes for H4 histone family members, a H2a histone family pseudogene, the H1f1 and H1f2 genes for H1 histone family members 1 and 2, the H3f2 gene for H3 histone family, member 2 (H3.2), a novel pseudogene, the Hfe gene for hemochromatosis protein (Mr2) and two CpG islands, complete sequence Length = 186062 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 323 acaggagaaaataaagttgct 343 ||||||||||||||||||||| Sbjct: 140512 acaggagaaaataaagttgct 140492
>emb|AJ250372.1|MSP250372 Mycobacterium sp. GP1 haloalkane dehalogenase gene region Length = 4925 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 140 ccggcgccgcggccccggccc 160 ||||||||||||||||||||| Sbjct: 2330 ccggcgccgcggccccggccc 2310
>dbj|AK124715.1| Homo sapiens cDNA FLJ42725 fis, clone BRAWH2001424 Length = 2711 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 184 gcgcccccgccggcccccgcgccgc 208 ||||||||||||||| ||||||||| Sbjct: 10 gcgcccccgccggccgccgcgccgc 34
>dbj|D86985.3| Homo sapiens mRNA for KIAA0232 protein, partial cds Length = 7840 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 184 gcgcccccgccggcccccgcgccgc 208 ||||||||||||||| ||||||||| Sbjct: 62 gcgcccccgccggccgccgcgccgc 86
>ref|XM_685913.1| PREDICTED: Danio rerio similar to TPR domain, ankyrin-repeat and coiled-coil-containing (LOC562534), mRNA Length = 2200 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 406 ttatgttctcctacctggaacatatcctt 434 |||||||| ||||||||||||| |||||| Sbjct: 2147 ttatgttcacctacctggaacaaatcctt 2119
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 75 gaagctggcgcgggaggcggc 95 ||||||||||||||||||||| Sbjct: 2448102 gaagctggcgcgggaggcggc 2448082 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 55 ccacccacccacccacacgc 74 |||||||||||||||||||| Sbjct: 30363402 ccacccacccacccacacgc 30363421 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 206 cgctcgtcgaggggggagga 225 |||||||||||||||||||| Sbjct: 21042741 cgctcgtcgaggggggagga 21042722
>gb|AF205589.5| Homo sapiens chromosome 8 clone CTA-393G12 map qtel, complete sequence Length = 143847 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 50 catccccacccacccacccac 70 ||||||||||||||||||||| Sbjct: 41280 catccccacccacccacccac 41300
>gb|AC106045.5| Homo sapiens BAC clone RP11-29H20 from 4, complete sequence Length = 183003 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 184 gcgcccccgccggcccccgcgccgc 208 ||||||||||||||| ||||||||| Sbjct: 54154 gcgcccccgccggccgccgcgccgc 54178
>gb|DP000027.1| Rattus norvegicus target 1 genomic scaffold Length = 1888123 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 52 tccccacccacccacccacac 72 ||||||||||||||||||||| Sbjct: 72518 tccccacccacccacccacac 72538
>gb|AC010729.8| Homo sapiens BAC clone RP11-350H23 from 2, complete sequence Length = 191934 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 48 cccatccccacccacccaccc 68 ||||||||||||||||||||| Sbjct: 70357 cccatccccacccacccaccc 70377
>dbj|AP002872.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0416D03 Length = 157112 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 75 gaagctggcgcgggaggcggc 95 ||||||||||||||||||||| Sbjct: 2523 gaagctggcgcgggaggcggc 2503
>ref|NM_014743.1| Homo sapiens KIAA0232 gene product (KIAA0232), mRNA Length = 7840 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 184 gcgcccccgccggcccccgcgccgc 208 ||||||||||||||| ||||||||| Sbjct: 62 gcgcccccgccggccgccgcgccgc 86
>gb|AC153521.7| Mus musculus 10 BAC RP23-292G15 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 202995 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 48 cccatccccacccacccacccacac 72 |||| |||||||||||||||||||| Sbjct: 117758 cccacccccacccacccacccacac 117782
>dbj|AP005580.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1759_F09 Length = 149501 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 48 cccatccccacccacccaccc 68 ||||||||||||||||||||| Sbjct: 59802 cccatccccacccacccaccc 59782
>dbj|AP005525.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0564H06 Length = 146823 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 48 cccatccccacccacccaccc 68 ||||||||||||||||||||| Sbjct: 82722 cccatccccacccacccaccc 82702
>emb|AL929153.11| Mouse DNA sequence from clone RP23-55C8 on chromosome 2, complete sequence Length = 116887 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/32 (93%), Gaps = 2/32 (6%) Strand = Plus / Minus Query: 41 cctgacacccatccccacccacccacccacac 72 ||||||||||| ||||||||||||||||||| Sbjct: 72639 cctgacaccca--cccacccacccacccacac 72610
>emb|AL672015.7| Mouse DNA sequence from clone RP23-154O12 on chromosome X, complete sequence Length = 194287 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 52 tccccacccacccacccacac 72 ||||||||||||||||||||| Sbjct: 176708 tccccacccacccacccacac 176728
>gb|DQ149153.1| Cercopithecine herpesvirus 16 strain X313, complete genome Length = 156487 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 143 gcgccgcggccccggcccccg 163 ||||||||||||||||||||| Sbjct: 63348 gcgccgcggccccggcccccg 63328
>gb|AC153797.1| Mus musculus 6 BAC RP23-96K19 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 142295 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 52 tccccacccacccacccacac 72 ||||||||||||||||||||| Sbjct: 7366 tccccacccacccacccacac 7346
>gb|AC146916.3| Rattus norvegicus strain Brown Norway clone CH230-206L9, complete sequence Length = 215015 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 52 tccccacccacccacccacac 72 ||||||||||||||||||||| Sbjct: 72518 tccccacccacccacccacac 72538
>emb|CT573016.5| Mouse DNA sequence from clone RP23-78E16 on chromosome 13, complete sequence Length = 211097 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 53 ccccacccacccacccacacg 73 ||||||||||||||||||||| Sbjct: 56222 ccccacccacccacccacacg 56242
>emb|CT571249.11| Mouse DNA sequence from clone RP24-92E16 on chromosome 13, complete sequence Length = 125655 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 53 ccccacccacccacccacacg 73 ||||||||||||||||||||| Sbjct: 50237 ccccacccacccacccacacg 50217
>gb|AC005263.1|AC005263 Homo sapiens chromosome 19, cosmid F20489, complete sequence Length = 35737 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 52 tccccacccacccacccacac 72 ||||||||||||||||||||| Sbjct: 4467 tccccacccacccacccacac 4447
>gb|AC138397.4| Mus musculus BAC clone RP23-65O11 from 8, complete sequence Length = 246976 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 48 cccatccccacccacccacccacac 72 ||||| ||||||||||||||||||| Sbjct: 213628 cccatacccacccacccacccacac 213652 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 53 ccccacccacccacccacac 72 |||||||||||||||||||| Sbjct: 50939 ccccacccacccacccacac 50920
>emb|AL844573.4| Mouse DNA sequence from clone RP23-277B16 on chromosome 2, complete sequence Length = 83137 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 50 catccccacccacccacccac 70 ||||||||||||||||||||| Sbjct: 54860 catccccacccacccacccac 54880
>gb|AC153908.2| Mus musculus 6 BAC RP23-190K19 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 201588 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 52 tccccacccacccacccacac 72 ||||||||||||||||||||| Sbjct: 40902 tccccacccacccacccacac 40922
>gb|AC138221.23| Mus musculus chromosome 15, clone RP23-204C16, complete sequence Length = 239740 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 46 cacccatccccacccacccacccac 70 |||||| |||||||||||||||||| Sbjct: 132501 cacccacccccacccacccacccac 132525
>emb|AL831779.4| Mouse DNA sequence from clone RP23-332L7 on chromosome X, complete sequence Length = 96413 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 46 cacccatccccacccacccacccac 70 |||||||||||||| |||||||||| Sbjct: 27938 cacccatccccacctacccacccac 27962
>gb|AC108914.8| Mus musculus chromosome 1, clone RP23-435E15, complete sequence Length = 212494 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 53 ccccacccacccacccacac 72 |||||||||||||||||||| Sbjct: 6647 ccccacccacccacccacac 6628
>gb|AC166798.3| Mus musculus chromosome 3, clone RP23-442J19, complete sequence Length = 216754 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 53 ccccacccacccacccacac 72 |||||||||||||||||||| Sbjct: 159071 ccccacccacccacccacac 159052
>ref|XM_519931.1| PREDICTED: Pan troglodytes similar to basic beta 1 syntrophin; syntrophin, beta 1 (dystrophin-associated protein A1, 59kD, basic component 1); tax interaction protein 43; dystrophin-associated protein A1, 59kD, basic component 1 (LOC464362), mRNA Length = 2947 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 78 gctggcgcgggaggcggccg 97 |||||||||||||||||||| Sbjct: 353 gctggcgcgggaggcggccg 372
>gb|AC169122.1| Mus musculus BAC clone RP23-167K9 from chromosome 17, complete sequence Length = 127115 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 53 ccccacccacccacccacac 72 |||||||||||||||||||| Sbjct: 111184 ccccacccacccacccacac 111203
>gb|AC161791.10| Mus musculus chromosome 18, clone RP24-391E2, complete sequence Length = 121257 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 53 ccccacccacccacccacac 72 |||||||||||||||||||| Sbjct: 66295 ccccacccacccacccacac 66276
>ref|NM_193466.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1143 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 206 cgctcgtcgaggggggagga 225 |||||||||||||||||||| Sbjct: 389 cgctcgtcgaggggggagga 408
>ref|XM_525097.1| PREDICTED: Pan troglodytes similar to interferon regulatory factor 2 binding protein 2 (LOC469713), mRNA Length = 3240 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 140 ccggcgccgcggccccggcc 159 |||||||||||||||||||| Sbjct: 1694 ccggcgccgcggccccggcc 1713
>gb|U93872.2| Kaposi's sarcoma-associated herpesvirus glycoprotein M, DNA replication protein, glycoprotein, DNA replication protein, FLICE inhibitory protein and v-cyclin genes, complete cds, and tegument protein gene, partial cds Length = 133661 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 45 acacccatccccacccaccc 64 |||||||||||||||||||| Sbjct: 33616 acacccatccccacccaccc 33597
>gb|AY764128.1| Mycobacterium avium subsp. avium resuscitation promoting factor (rpf) gene, complete cds Length = 675 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 181 gacgcgcccccgccggcccc 200 |||||||||||||||||||| Sbjct: 316 gacgcgcccccgccggcccc 335
>gb|AC164423.2| Mus musculus chromosome 3, clone RP24-361M10, complete sequence Length = 151556 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 53 ccccacccacccacccacac 72 |||||||||||||||||||| Sbjct: 136779 ccccacccacccacccacac 136760
>gb|AE001274.2| Leishmania major strain Friedlin chromosome 1, complete sequence Length = 268984 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 53 ccccacccacccacccacac 72 |||||||||||||||||||| Sbjct: 127278 ccccacccacccacccacac 127297
>gb|AY023136.1| Oryza sativa microsatellite MRG5461 containing (GCC)X8, genomic sequence Length = 224 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 206 cgctcgtcgaggggggagga 225 |||||||||||||||||||| Sbjct: 16 cgctcgtcgaggggggagga 35
>gb|AC147925.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0032N11 map near 50283S, complete sequence Length = 139217 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 85 cgggaggcggccgacgcgag 104 |||||||||||||||||||| Sbjct: 131909 cgggaggcggccgacgcgag 131928
>gb|AC146526.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0027D12 map near 50283S, complete sequence Length = 128988 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 85 cgggaggcggccgacgcgag 104 |||||||||||||||||||| Sbjct: 16488 cgggaggcggccgacgcgag 16507
>gb|AC164649.4| Mus musculus BAC clone RP23-437D10 from chromosome 5, complete sequence Length = 215766 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 ccatccccacccacccaccc 68 |||||||||||||||||||| Sbjct: 107841 ccatccccacccacccaccc 107822
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 192 gccggcccccgcgccgctcgtcga 215 ||||||||||||||||| |||||| Sbjct: 1419719 gccggcccccgcgccgcccgtcga 1419696
>gb|AC106169.5| Rattus norvegicus x BAC CH230-105D14 (Children's Hospital Oakland Research Institute) complete sequence Length = 227592 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 53 ccccacccacccacccacac 72 |||||||||||||||||||| Sbjct: 146161 ccccacccacccacccacac 146180
>gb|AC109239.8| Mus musculus chromosome 3, clone RP23-191N23, complete sequence Length = 187162 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 53 ccccacccacccacccacac 72 |||||||||||||||||||| Sbjct: 65496 ccccacccacccacccacac 65515
>gb|AC133874.10| Mus musculus chromosome 19, clone RP23-81N16, complete sequence Length = 215113 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 53 ccccacccacccacccacac 72 |||||||||||||||||||| Sbjct: 85612 ccccacccacccacccacac 85593
>gb|AC124322.7| Mus musculus chromosome 7, clone RP24-330M21, complete sequence Length = 139336 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 53 ccccacccacccacccacac 72 |||||||||||||||||||| Sbjct: 107198 ccccacccacccacccacac 107179
>ref|XM_616461.2| PREDICTED: Bos taurus similar to membrane component chromosome 11 surface marker 1 isoform 1 (LOC536334), mRNA Length = 1185 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 140 ccggcgccgcggccccggcccccg 163 ||||||| |||||||||||||||| Sbjct: 595 ccggcgcggcggccccggcccccg 572
>gb|AC129593.4| Mus musculus BAC clone RP24-142E6 from chromosome 7, complete sequence Length = 210291 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 53 ccccacccacccacccacac 72 |||||||||||||||||||| Sbjct: 69942 ccccacccacccacccacac 69961
>gb|AC113439.14| Mus musculus chromosome 10, clone RP23-193K15, complete sequence Length = 205857 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 53 ccccacccacccacccacac 72 |||||||||||||||||||| Sbjct: 29338 ccccacccacccacccacac 29357
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 185 cgcccccgccggcccccgcgccgc 208 |||||| ||||||||||||||||| Sbjct: 366464 cgccccggccggcccccgcgccgc 366441
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 192 gccggcccccgcgccgctcgtcga 215 ||||||||||||||||| |||||| Sbjct: 2645836 gccggcccccgcgccgcccgtcga 2645813
>gb|AC126424.12| Mus musculus chromosome 17, clone RP23-19K10, complete sequence Length = 182696 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 53 ccccacccacccacccacac 72 |||||||||||||||||||| Sbjct: 25445 ccccacccacccacccacac 25426
>gb|AC117949.5| Mus musculus BAC clone RP23-197M6 from chromosome 18, complete sequence Length = 196445 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 53 ccccacccacccacccacac 72 |||||||||||||||||||| Sbjct: 52313 ccccacccacccacccacac 52332
>gb|BC116102.1| Bos taurus cDNA clone MGC:139131 IMAGE:8097971, complete cds Length = 3386 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 140 ccggcgccgcggccccggcccccg 163 ||||||| |||||||||||||||| Sbjct: 187 ccggcgcggcggccccggcccccg 164
>gb|AC087860.2| Bos taurus clone RP42-135P2, complete sequence Length = 203696 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 314 ccccattttacaggagaaaa 333 |||||||||||||||||||| Sbjct: 135577 ccccattttacaggagaaaa 135558
>gb|AC140042.19| Mus musculus chromosome 5, clone RP23-437D10, complete sequence Length = 215786 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 49 ccatccccacccacccaccc 68 |||||||||||||||||||| Sbjct: 107927 ccatccccacccacccaccc 107946
>gb|AC117677.9| Mus musculus chromosome 7, clone RP23-421G2, complete sequence Length = 249789 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 53 ccccacccacccacccacac 72 |||||||||||||||||||| Sbjct: 25908 ccccacccacccacccacac 25927
>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome Length = 3402093 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 90 ggcggccgacgcgagcgccc 109 |||||||||||||||||||| Sbjct: 2124480 ggcggccgacgcgagcgccc 2124499
>gb|DP000008.1| Bos taurus target 1 genomic scaffold Length = 2072671 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 314 ccccattttacaggagaaaa 333 |||||||||||||||||||| Sbjct: 726081 ccccattttacaggagaaaa 726062
>gb|AC154726.2| Mus musculus BAC clone RP24-373I6 from chromosome 13, complete sequence Length = 173853 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 52 tccccacccacccacccaca 71 |||||||||||||||||||| Sbjct: 84233 tccccacccacccacccaca 84252
>gb|AC163615.5| Mus musculus BAC clone RP23-104L12 from chromosome 8, complete sequence Length = 222950 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 53 ccccacccacccacccacac 72 |||||||||||||||||||| Sbjct: 59776 ccccacccacccacccacac 59757
>gb|AC133451.14| Mus musculus chromosome 19, clone RP24-91H12, complete sequence Length = 184265 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 428 tatccttgagacacaagaca 447 |||||||||||||||||||| Sbjct: 92412 tatccttgagacacaagaca 92431
>gb|AC107865.7| Mus musculus chromosome 1, clone RP23-389C9, complete sequence Length = 204959 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 53 ccccacccacccacccacac 72 |||||||||||||||||||| Sbjct: 192884 ccccacccacccacccacac 192865
>gb|AC115799.10| Mus musculus chromosome 6, clone RP23-406G9, complete sequence Length = 227078 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 41 cctgacacccatccccacccaccc 64 |||||| ||||||||||||||||| Sbjct: 111710 cctgacccccatccccacccaccc 111733
>gb|AC120558.12| Mus musculus chromosome 18, clone RP24-494K12, complete sequence Length = 216435 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 45 acacccatccccacccacccacccacac 72 ||||||| ||||||||||||||||||| Sbjct: 190423 acacccacacccacccacccacccacac 190396
>gb|CP000353.1| Ralstonia metallidurans CH34 megaplasmid, complete sequence Length = 2580084 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 92 cggccgacgcgagcgcccgc 111 |||||||||||||||||||| Sbjct: 1834494 cggccgacgcgagcgcccgc 1834513
>gb|AF148805.2| Human herpesvirus 8 isolate GK18, complete genome Length = 137969 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 45 acacccatccccacccaccc 64 |||||||||||||||||||| Sbjct: 33416 acacccatccccacccaccc 33397
>gb|AC125357.4| Mus musculus BAC clone RP23-235J18 from chromosome 9, complete sequence Length = 217511 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 53 ccccacccacccacccacac 72 |||||||||||||||||||| Sbjct: 69448 ccccacccacccacccacac 69467
>gb|AC124449.3| Mus musculus BAC clone RP24-212N10 from chromosome 15, complete sequence Length = 165858 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 53 ccccacccacccacccacac 72 |||||||||||||||||||| Sbjct: 83768 ccccacccacccacccacac 83749
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome Length = 5178466 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 188 ccccgccggcccccgcgccgctcg 211 ||||||||||| |||||||||||| Sbjct: 4446094 ccccgccggccgccgcgccgctcg 4446117
>emb|Z78205.1|BHT1UL Bovine herpesvirus type 1 UL22-35 genes Length = 37000 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 178 ggcgacgcgcccccgccggcccccgcgc 205 ||||||||| ||||||||||||||||| Sbjct: 7695 ggcgacgcgtacccgccggcccccgcgc 7722
>emb|AJ004801.1|BHV1CGEN Bovine herpesvirus type 1.1 complete genome Length = 135301 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 178 ggcgacgcgcccccgccggcccccgcgc 205 ||||||||| ||||||||||||||||| Sbjct: 38495 ggcgacgcgtacccgccggcccccgcgc 38522
>gb|AC107711.13| Mus musculus chromosome 14, clone RP23-291I12, complete sequence Length = 228302 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 50 catccccacccacccaccca 69 |||||||||||||||||||| Sbjct: 62984 catccccacccacccaccca 62965
>gb|AC135081.3| Mus musculus BAC clone RP24-131A24 from chromosome 7, complete sequence Length = 163138 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 53 ccccacccacccacccacac 72 |||||||||||||||||||| Sbjct: 31283 ccccacccacccacccacac 31264
>gb|AC132098.4| Mus musculus BAC clone RP24-401I1 from chromosome 18, complete sequence Length = 154520 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 45 acacccatccccacccacccacccacac 72 ||||||| ||||||||||||||||||| Sbjct: 97402 acacccacacccacccacccacccacac 97375
>gb|AC132619.3| Mus musculus BAC clone RP23-195N4 from chromosome 7, complete sequence Length = 193890 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 53 ccccacccacccacccacac 72 |||||||||||||||||||| Sbjct: 88041 ccccacccacccacccacac 88022
>gb|AC123948.4| Mus musculus BAC clone RP23-105C3 from chromosome 10, complete sequence Length = 214819 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 53 ccccacccacccacccacac 72 |||||||||||||||||||| Sbjct: 198974 ccccacccacccacccacac 198993
>gb|AC127678.9| Mus musculus BAC clone RP24-233M12 from chromosome 18, complete sequence Length = 157430 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 53 ccccacccacccacccacac 72 |||||||||||||||||||| Sbjct: 53057 ccccacccacccacccacac 53038
>gb|AC124497.3| Mus musculus BAC clone RP23-480E8 from chromosome 5, complete sequence Length = 206926 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 53 ccccacccacccacccacac 72 |||||||||||||||||||| Sbjct: 178512 ccccacccacccacccacac 178493
>emb|AL032631.1|CEY106G6H Caenorhabditis elegans YAC Y106G6H, complete sequence Length = 48613 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 381 gatggaaactgcttttatcg 400 |||||||||||||||||||| Sbjct: 38762 gatggaaactgcttttatcg 38743
>gb|AC108945.4| Mus musculus BAC clone RP23-119J11 from 15, complete sequence Length = 200294 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 53 ccccacccacccacccacac 72 |||||||||||||||||||| Sbjct: 92204 ccccacccacccacccacac 92223
>gb|AC117217.2| Mus musculus BAC clone RP23-318C3 from 17, complete sequence Length = 199711 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 51 atccccacccacccacccac 70 |||||||||||||||||||| Sbjct: 118088 atccccacccacccacccac 118069
>gb|AC123043.2| Mus musculus BAC clone RP24-547G7 from 13, complete sequence Length = 230940 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 53 ccccacccacccacccacac 72 |||||||||||||||||||| Sbjct: 92327 ccccacccacccacccacac 92346
>gb|AC098707.2| Mus musculus BAC clone RP23-1I13 from 18, complete sequence Length = 230128 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 53 ccccacccacccacccacac 72 |||||||||||||||||||| Sbjct: 53581 ccccacccacccacccacac 53562
>gb|AC004912.2| Homo sapiens PAC clone RP5-871B15 from 7, complete sequence Length = 157321 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 53 ccccacccacccacccacac 72 |||||||||||||||||||| Sbjct: 122826 ccccacccacccacccacac 122845
>gb|AC009493.3| Homo sapiens BAC clone RP11-448A3 from 7, complete sequence Length = 86516 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 53 ccccacccacccacccacac 72 |||||||||||||||||||| Sbjct: 57781 ccccacccacccacccacac 57800
>gb|AC154766.2| Mus musculus BAC clone RP24-440G8 from chromosome 17, complete sequence Length = 166224 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 53 ccccacccacccacccacac 72 |||||||||||||||||||| Sbjct: 64060 ccccacccacccacccacac 64041
>gb|AC166575.1| Mus musculus BAC clone RP23-99E16 from chromosome 17, complete sequence Length = 200353 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 183 cgcgcccccgccggcccccgcgcc 206 ||||||||||||||||| |||||| Sbjct: 61739 cgcgcccccgccggcccgcgcgcc 61762
>ref|XM_504143.1| Yarrowia lipolytica CLIB122, YALI0E19382g predicted mRNA Length = 1935 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 aagccgtcgtctcgaactcc 20 |||||||||||||||||||| Sbjct: 1130 aagccgtcgtctcgaactcc 1111
>emb|AL356265.10| Human DNA sequence from clone RP13-83C14 on chromosome X Contains a YWHA tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein pseudogene and a keratin 8 (KRT8) pseudogene, complete sequence Length = 165609 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 409 tgttctcctacctggaacat 428 |||||||||||||||||||| Sbjct: 69603 tgttctcctacctggaacat 69622
>gb|AC046185.14| Homo sapiens chromosome 17, clone RP11-51F16, complete sequence Length = 173637 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 185 cgcccccgccggcccccgcgccgc 208 ||||||||||||||||||| |||| Sbjct: 29459 cgcccccgccggcccccgccccgc 29436
>gb|AC157816.4| Mus musculus chromosome 3, clone RP24-255I19, complete sequence Length = 204358 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 51 atccccacccacccacccac 70 |||||||||||||||||||| Sbjct: 154933 atccccacccacccacccac 154952
>emb|CR848038.1| Chlamydophila abortus strain S26/3, complete genome Length = 1144377 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 378 ggagatggaaactgctttta 397 |||||||||||||||||||| Sbjct: 279740 ggagatggaaactgctttta 279721
>gb|AC183622.3| Pan troglodytes BAC clone CH251-66G8 from chromosome 15, complete sequence Length = 206618 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 409 tgttctcctacctggaacat 428 |||||||||||||||||||| Sbjct: 107341 tgttctcctacctggaacat 107360
>gb|AC166172.1| Mus musculus BAC clone RP23-106N22 from chromosome 17, complete sequence Length = 213656 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 183 cgcgcccccgccggcccccgcgcc 206 ||||||||||||||||| |||||| Sbjct: 1587 cgcgcccccgccggcccgcgcgcc 1610
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 185 cgcccccgccggcccccgcgccgc 208 |||||| ||||||||||||||||| Sbjct: 1685656 cgccccggccggcccccgcgccgc 1685633
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 192 gccggcccccgcgccgctcgtcga 215 ||||||||||||||||| |||||| Sbjct: 1737642 gccggcccccgcgccgcccgtcga 1737665
>gb|BC098573.1| Homo sapiens syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1), mRNA (cDNA clone MGC:111389 IMAGE:30925462), complete cds Length = 2827 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 78 gctggcgcgggaggcggccg 97 |||||||||||||||||||| Sbjct: 223 gctggcgcgggaggcggccg 242
>gb|AC164000.2| Mus musculus chromosome 7, clone RP23-157G7, complete sequence Length = 206022 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 53 ccccacccacccacccacac 72 |||||||||||||||||||| Sbjct: 144186 ccccacccacccacccacac 144167
>gb|AC162913.3| Mus musculus BAC clone RP24-409P22 from chromosome 3, complete sequence Length = 175922 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 53 ccccacccacccacccacac 72 |||||||||||||||||||| Sbjct: 113992 ccccacccacccacccacac 114011
>emb|AL607083.17| Mouse DNA sequence from clone RP23-206E3 on chromosome 11 Contains a novel gene, complete sequence Length = 189495 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 54 cccacccacccacccacacg 73 |||||||||||||||||||| Sbjct: 178854 cccacccacccacccacacg 178835
>emb|AL645934.7| Mouse DNA sequence from clone RP23-27P11 on chromosome 11, complete sequence Length = 225839 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 45 acacccatccccacccacccacccacac 72 |||||||||| ||||||||||| ||||| Sbjct: 39368 acacccatccacacccacccacacacac 39395
>gb|AC122179.6| Homo sapiens chromosome 11, clone CTD-2311N7, complete sequence Length = 53732 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 140 ccggcgccgcggccccggcc 159 |||||||||||||||||||| Sbjct: 44563 ccggcgccgcggccccggcc 44544
>emb|BX511009.6| Zebrafish DNA sequence from clone DKEYP-86F6 in linkage group 20 Contains the 5' end of a novel gene and a novel gene, complete sequence Length = 122167 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 53 ccccacccacccacccacac 72 |||||||||||||||||||| Sbjct: 112615 ccccacccacccacccacac 112596
>gb|AC133198.3| Mus musculus BAC clone RP23-251I6 from chromosome 17, complete sequence Length = 182898 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 53 ccccacccacccacccacac 72 |||||||||||||||||||| Sbjct: 136307 ccccacccacccacccacac 136326
>gb|AC163649.3| Mus musculus BAC clone RP24-372B10 from chromosome 3, complete sequence Length = 154740 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 53 ccccacccacccacccacac 72 |||||||||||||||||||| Sbjct: 107207 ccccacccacccacccacac 107226
>gb|AC073565.5| Mus musculus strain C57BL/6J chromosome 12 clone RP23-70F21, complete sequence Length = 180673 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 45 acacccatccccacccacccacccacac 72 |||||||| ||||||||||| ||||||| Sbjct: 79704 acacccatacccacccacccccccacac 79731
>gb|AC113619.5| Drosophila melanogaster X BAC RP98-22D21 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 160001 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 303 cagtctggcagccccattttacag 326 ||||||||||||||||| |||||| Sbjct: 84902 cagtctggcagccccatattacag 84879
>emb|CR392340.11| Zebrafish DNA sequence from clone DKEY-23G12 in linkage group 20, complete sequence Length = 247887 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 294 gcagagttccagtctggcag 313 |||||||||||||||||||| Sbjct: 9100 gcagagttccagtctggcag 9081
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome Length = 4940217 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 76 aagctggcgcgggaggcggccgac 99 |||||||||| ||||||||||||| Sbjct: 510059 aagctggcgcaggaggcggccgac 510036
>gb|AC133492.10| Rattus norvegicus clone rp32-478o16, complete sequence Length = 170268 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 50 catccccacccacccaccca 69 |||||||||||||||||||| Sbjct: 135593 catccccacccacccaccca 135574
>gb|AC104958.6| Homo sapiens chromosome 8, clone RP11-713M15, complete sequence Length = 188326 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 78 gctggcgcgggaggcggccg 97 |||||||||||||||||||| Sbjct: 11674 gctggcgcgggaggcggccg 11693
>gb|AC023710.5| Drosophila melanogaster X BAC RP98-19D3 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 189976 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 303 cagtctggcagccccattttacag 326 ||||||||||||||||| |||||| Sbjct: 1331 cagtctggcagccccatattacag 1354
>tpg|BK003771.1| TPA: TPA_inf: Drosophila melanogaster HDC06178 (HDC06178) gene, complete cds Length = 1134 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 28 cccacacccacaacctgacaccca 51 ||||||||||||||| |||||||| Sbjct: 696 cccacacccacaaccagacaccca 673
>gb|AC084072.13| Mus musculus strain 129S6/SvEvTac clone rp22-511i2, complete sequence Length = 114579 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 332 aataaagttgcttggtgaac 351 |||||||||||||||||||| Sbjct: 88380 aataaagttgcttggtgaac 88361
>gb|AC118456.2| Homo sapiens chromosome 5 clone CTD-2288B6, complete sequence Length = 121822 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 53 ccccacccacccacccacac 72 |||||||||||||||||||| Sbjct: 53539 ccccacccacccacccacac 53558
>gb|AC024900.20| Homo sapiens 12 BAC RP11-549E9 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 171970 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 316 ccattttacaggagaaaata 335 |||||||||||||||||||| Sbjct: 171335 ccattttacaggagaaaata 171354
>gb|AC106013.2| Homo sapiens chromosome 8, clone RP11-1109L18, complete sequence Length = 166093 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 78 gctggcgcgggaggcggccg 97 |||||||||||||||||||| Sbjct: 80800 gctggcgcgggaggcggccg 80781
>gb|AC011979.7| Homo sapiens chromosome 11, clone RP11-16F15, complete sequence Length = 154995 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 140 ccggcgccgcggccccggcc 159 |||||||||||||||||||| Sbjct: 151948 ccggcgccgcggccccggcc 151967
>gb|AC007431.8| Homo sapiens chromosome 17, clone RP11-118E18, complete sequence Length = 166518 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 53 ccccacccacccacccacac 72 |||||||||||||||||||| Sbjct: 59052 ccccacccacccacccacac 59071
>gb|AC092751.4| Genomic sequence for Mus musculus, clone RP23-113P18, complete sequence Length = 209990 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 52 tccccacccacccacccaca 71 |||||||||||||||||||| Sbjct: 49524 tccccacccacccacccaca 49505
>gb|AC099026.1| Drosophila melanogaster, chromosome 2R, region 49F-50A, BAC clone BACR05M17, complete sequence Length = 182039 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 28 cccacacccacaacctgacaccca 51 ||||||||||||||| |||||||| Sbjct: 30719 cccacacccacaaccagacaccca 30742
>gb|AY007366.1| Lycopersicon esculentum tospovirus resistance protein A (Sw5-a) and tospovirus resistance protein B (Sw5-b) genes, complete cds Length = 35250 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 51 atccccacccacccacccac 70 |||||||||||||||||||| Sbjct: 27256 atccccacccacccacccac 27237
>ref|NM_021021.2| Homo sapiens syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1) (SNTB1), mRNA Length = 2978 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 78 gctggcgcgggaggcggccg 97 |||||||||||||||||||| Sbjct: 326 gctggcgcgggaggcggccg 345
>gb|AC131867.4| Rattus norvegicus 1 BAC CH230-397C2 (Children's Hospital Oakland Research Institute) complete sequence Length = 133470 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 47 acccatccccacccacccacccac 70 ||||| |||||||||||||||||| Sbjct: 80441 acccacccccacccacccacccac 80418
>gb|AC154505.3| Mus musculus BAC clone RP24-92J14 from chromosome 13, complete sequence Length = 199707 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 53 ccccacccacccacccacac 72 |||||||||||||||||||| Sbjct: 180943 ccccacccacccacccacac 180962
>gb|AC159885.2| Mus musculus BAC clone RP24-432B19 from chromosome 12, complete sequence Length = 177570 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 53 ccccacccacccacccacac 72 |||||||||||||||||||| Sbjct: 149857 ccccacccacccacccacac 149838
>gb|AC115847.19| Mus musculus chromosome 5, clone RP24-245J15, complete sequence Length = 182243 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 184 gcgcccccgccggcccccgc 203 |||||||||||||||||||| Sbjct: 106907 gcgcccccgccggcccccgc 106888
>ref|NM_060335.3| Caenorhabditis elegans Deubiquitylating with USP/UBP and OTU domains family member (duo-3) (duo-3) mRNA, complete cds Length = 3255 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 381 gatggaaactgcttttatcg 400 |||||||||||||||||||| Sbjct: 2221 gatggaaactgcttttatcg 2240
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 185 cgcccccgccggcccccgcgccgc 208 |||||| ||||||||||||||||| Sbjct: 1136041 cgccccggccggcccccgcgccgc 1136018
>gb|AC091529.1|AC091529 Homo sapiens chromosome 17 clone 1005, complete sequence Length = 157463 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 53 ccccacccacccacccacac 72 |||||||||||||||||||| Sbjct: 54457 ccccacccacccacccacac 54438
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 85 cgggaggcggccgacgcgag 104 |||||||||||||||||||| Sbjct: 14517075 cgggaggcggccgacgcgag 14517094
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 52 tccccacccacccacccaca 71 |||||||||||||||||||| Sbjct: 26965432 tccccacccacccacccaca 26965451
>dbj|AB221618.1| Mus musculus cDNA pooled tissues:(tissue_type=brain,dev_stage=8-12 days neonate,strain=BALB/c),(tissue_type=testis, dev_stage=adult, strain=C57BL/6J), clone:V01Y019G13 Length = 791 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 184 gcgcccccgccggcccccgc 203 |||||||||||||||||||| Sbjct: 669 gcgcccccgccggcccccgc 650
>gb|AC015651.18|AC015651 Homo sapiens chromosome 17, clone RP11-55A13, complete sequence Length = 191583 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 185 cgcccccgccggcccccgcgccgc 208 ||||||||||||||||||| |||| Sbjct: 174006 cgcccccgccggcccccgccccgc 173983
>gb|AC007559.3| Homo sapiens BAC clone RP11-364J6 from 2, complete sequence Length = 156374 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 53 ccccacccacccacccacac 72 |||||||||||||||||||| Sbjct: 33251 ccccacccacccacccacac 33270
>gb|AC127537.7| Homo sapiens chromosome 17, clone RP1-178F10, complete sequence Length = 131302 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 314 ccccattttacaggagaaaa 333 |||||||||||||||||||| Sbjct: 34357 ccccattttacaggagaaaa 34376
>dbj|AP003443.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1144D11 Length = 157943 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 206 cgctcgtcgaggggggagga 225 |||||||||||||||||||| Sbjct: 10286 cgctcgtcgaggggggagga 10267
>dbj|AP003372.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1014_G12 Length = 158830 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 206 cgctcgtcgaggggggagga 225 |||||||||||||||||||| Sbjct: 105943 cgctcgtcgaggggggagga 105924
>dbj|AP002899.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0456A01 Length = 143710 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 55 ccacccacccacccacacgc 74 |||||||||||||||||||| Sbjct: 49129 ccacccacccacccacacgc 49148
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 143 gcgccgcggccccggcccccgagg 166 ||||||||||||||||| |||||| Sbjct: 2200743 gcgccgcggccccggccgccgagg 2200720
>gb|AC009226.3| Homo sapiens BAC clone RP11-167C7 from 2, complete sequence Length = 138778 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 314 ccccattttacaggagaaaa 333 |||||||||||||||||||| Sbjct: 26358 ccccattttacaggagaaaa 26339
>ref|XM_223053.3| PREDICTED: Rattus norvegicus similar to usherin isoform B (LOC289369), mRNA Length = 18975 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 45 acacccatccccacccacccaccc 68 ||||| |||||||||||||||||| Sbjct: 10295 acaccgatccccacccacccaccc 10318
>ref|XM_221885.3| PREDICTED: Rattus norvegicus genomic screened homeo box 1 (predicted) (Gsh1_predicted), mRNA Length = 1835 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 184 gcgcccccgccggcccccgc 203 |||||||||||||||||||| Sbjct: 917 gcgcccccgccggcccccgc 898
>gb|AF497482.1| Micromonospora echinospora calicheamicin biosynthetic locus, complete sequence Length = 90348 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 92 cggccgacgcgagcgcccgc 111 |||||||||||||||||||| Sbjct: 35779 cggccgacgcgagcgcccgc 35760
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 151 gccccggcccccgaggacgcggcc 174 ||||||||||||| |||||||||| Sbjct: 3841046 gccccggcccccgcggacgcggcc 3841069
>gb|AC063943.23| Homo sapiens 12 BAC RP11-18C24 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 137242 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 52 tccccacccacccacccaca 71 |||||||||||||||||||| Sbjct: 8909 tccccacccacccacccaca 8890
>gb|AC129916.6| Homo sapiens chromosome 17, clone RP11-2L19, complete sequence Length = 167265 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 53 ccccacccacccacccacac 72 |||||||||||||||||||| Sbjct: 28398 ccccacccacccacccacac 28417
>gb|AC174929.1| Mus musculus BAC clone CH25-367I5 from chromosome 3, complete sequence Length = 90189 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 53 ccccacccacccacccacac 72 |||||||||||||||||||| Sbjct: 41967 ccccacccacccacccacac 41986
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 93 ggccgacgcgagcgcccgcaagcg 116 ||||||||||| |||||||||||| Sbjct: 4400513 ggccgacgcgatcgcccgcaagcg 4400536
>gb|AC157819.5| Mus musculus chromosome 3, clone RP24-273H20, complete sequence Length = 151601 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 318 attttacaggagaaaataaa 337 |||||||||||||||||||| Sbjct: 127775 attttacaggagaaaataaa 127756
>dbj|AP005108.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0461B08 Length = 153743 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 52 tccccacccacccacccaca 71 |||||||||||||||||||| Sbjct: 18634 tccccacccacccacccaca 18653
>emb|BX001050.4| Zebrafish DNA sequence from clone CH211-139N6 in linkage group 10, complete sequence Length = 175495 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 53 ccccacccacccacccacac 72 |||||||||||||||||||| Sbjct: 135454 ccccacccacccacccacac 135435
>emb|AL954390.19| Mouse DNA sequence from clone RP23-13H18 on chromosome 4, complete sequence Length = 185237 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 53 ccccacccacccacccacac 72 |||||||||||||||||||| Sbjct: 113695 ccccacccacccacccacac 113714
>emb|AJ277546.2|HSA277546 Homo sapiens WEE1 gene for protein kinase and partial ZNF143 gene for zinc finger transcription factor Length = 131998 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 140 ccggcgccgcggccccggcc 159 |||||||||||||||||||| Sbjct: 60918 ccggcgccgcggccccggcc 60899
>gb|AC006449.19|AC006449 Homo sapiens chromosome 17, clone hCIT.58_E_17, complete sequence Length = 286758 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 53 ccccacccacccacccacac 72 |||||||||||||||||||| Sbjct: 17378 ccccacccacccacccacac 17359
>gb|AC125270.7| Mus musculus chromosome 5, clone RP24-150L20, complete sequence Length = 174834 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 53 ccccacccacccacccacac 72 |||||||||||||||||||| Sbjct: 141138 ccccacccacccacccacac 141157
>gb|AC008370.1|AC008370 Drosophila melanogaster, chromosome 2R, region 44B-44C, BAC clones BACR09N11 and BACR40A15, complete sequence Length = 132171 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 48 cccatccccacccacccacccaca 71 |||||||||||||| ||||||||| Sbjct: 86188 cccatccccacccatccacccaca 86211
>tpe|BN000872.1| TPA: TPA_exp: Mus musculus immunoglobulin heavy chain variable region locus, strain C57BL/6 Length = 2500000 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 45 acacccatccccacccacccacccacac 72 |||||||| ||||||||||| ||||||| Sbjct: 1264333 acacccatacccacccacccccccacac 1264360
>gb|AE003838.3| Drosophila melanogaster chromosome 2R, section 12 of 73 of the complete sequence Length = 226833 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 48 cccatccccacccacccacccaca 71 |||||||||||||| ||||||||| Sbjct: 160947 cccatccccacccatccacccaca 160970
>gb|AE003818.3| Drosophila melanogaster chromosome 2R, section 32 of 73 of the complete sequence Length = 291923 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 28 cccacacccacaacctgacaccca 51 ||||||||||||||| |||||||| Sbjct: 21589 cccacacccacaaccagacaccca 21566
>emb|AL049833.5|CNS0000D Human chromosome 14 DNA sequence BAC R-907D1 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 203266 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 53 ccccacccacccacccacac 72 |||||||||||||||||||| Sbjct: 67623 ccccacccacccacccacac 67604
>gb|AE003436.3| Drosophila melanogaster chromosome X, section 20 of 74 of the complete sequence Length = 317322 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 303 cagtctggcagccccattttacag 326 ||||||||||||||||| |||||| Sbjct: 308452 cagtctggcagccccatattacag 308475
>gb|AC006422.1|AC006422 Drosophila melanogaster, chromosome 2R, region 50A2-50A3, P1 clones DS08976 and DS01149, complete sequence Length = 129605 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 28 cccacacccacaacctgacaccca 51 ||||||||||||||| |||||||| Sbjct: 62445 cccacacccacaaccagacaccca 62422
>gb|AY664419.1| Zea mays cultivar Mo17 locus 9009, complete sequence Length = 405672 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 53 ccccacccacccacccacac 72 |||||||||||||||||||| Sbjct: 253645 ccccacccacccacccacac 253664
>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome Length = 4941439 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 76 aagctggcgcgggaggcggccgac 99 |||||||||| ||||||||||||| Sbjct: 522203 aagctggcgcaggaggcggccgac 522180
>emb|CT033750.18| Mouse DNA sequence from clone RP23-263M5 on chromosome 17, complete sequence Length = 268616 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 53 ccccacccacccacccacac 72 |||||||||||||||||||| Sbjct: 110937 ccccacccacccacccacac 110918
>dbj|AP002827.4| Homo sapiens genomic DNA, chromosome 11q, clone:CTD-2589O24, complete sequence Length = 64281 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 311 cagccccattttacaggagaaaat 334 |||||||||||||||| ||||||| Sbjct: 11660 cagccccattttacagaagaaaat 11637
>dbj|AP005716.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1445E9, complete sequence Length = 151880 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 78 gctggcgcgggaggcggccg 97 |||||||||||||||||||| Sbjct: 41984 gctggcgcgggaggcggccg 41965
>gb|AC087416.18| Mus musculus strain C57BL/6J chromosome 2 clone rp23-224l16, complete sequence Length = 183349 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 53 ccccacccacccacccacac 72 |||||||||||||||||||| Sbjct: 45060 ccccacccacccacccacac 45079
>gb|U75698.1|KSU75698 Kaposi's sarcoma-associated herpesvirus long unique region, 80 putative ORF's and kaposin gene, complete cds Length = 137508 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 45 acacccatccccacccaccc 64 |||||||||||||||||||| Sbjct: 33317 acacccatccccacccaccc 33298
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 181 gacgcgcccccgccggcccc 200 |||||||||||||||||||| Sbjct: 825152 gacgcgcccccgccggcccc 825133
>gb|U41741.1|MMU41741 Mus musculus transcription factor MMUSF (USF) gene, exons 1-10, complete cds Length = 10690 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 53 ccccacccacccacccacac 72 |||||||||||||||||||| Sbjct: 1705 ccccacccacccacccacac 1686
>gb|AC110519.13| Mus musculus chromosome 8, clone RP23-183M15, complete sequence Length = 217236 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 53 ccccacccacccacccacac 72 |||||||||||||||||||| Sbjct: 89911 ccccacccacccacccacac 89930
>emb|AL035367.5|HSF10178 Homo sapiens chromosome 17 sequence from PAC RP1-178F10 region D17S842-D17S953 map 17p11.2, complete sequence Length = 132486 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 314 ccccattttacaggagaaaa 333 |||||||||||||||||||| Sbjct: 35543 ccccattttacaggagaaaa 35562
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 85 cgggaggcggccgacgcgag 104 |||||||||||||||||||| Sbjct: 14599076 cgggaggcggccgacgcgag 14599095
>gb|AC168063.3| Mus musculus BAC clone RP23-197G3 from chromosome 17, complete sequence Length = 213263 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 53 ccccacccacccacccacac 72 |||||||||||||||||||| Sbjct: 7471 ccccacccacccacccacac 7490
>emb|CT030254.7| Mouse DNA sequence from clone RP24-343E1 on chromosome 13, complete sequence Length = 147004 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 52 tccccacccacccacccaca 71 |||||||||||||||||||| Sbjct: 137716 tccccacccacccacccaca 137735
>emb|AL773563.12| Mouse DNA sequence from clone RP23-414L19 on chromosome 2, complete sequence Length = 184665 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 52 tccccacccacccacccaca 71 |||||||||||||||||||| Sbjct: 4561 tccccacccacccacccaca 4542
>gb|AC134843.4| Mus musculus BAC clone RP24-388C21 from 3, complete sequence Length = 205200 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 45 acacccatccccacccacccacccacac 72 |||||||| ||||||||||||| ||||| Sbjct: 127116 acacccatacccacccacccacacacac 127143
>gb|AC132353.3| Mus musculus BAC clone RP24-100I23 from 17, complete sequence Length = 202603 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 53 ccccacccacccacccacac 72 |||||||||||||||||||| Sbjct: 94135 ccccacccacccacccacac 94116
>gb|AC124344.6| Mus musculus BAC clone RP24-448A7 from 3, complete sequence Length = 219818 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 53 ccccacccacccacccacac 72 |||||||||||||||||||| Sbjct: 217610 ccccacccacccacccacac 217629
>emb|CT030645.4| Mouse DNA sequence from clone RP23-413E24 on chromosome 13, complete sequence Length = 176213 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 52 tccccacccacccacccaca 71 |||||||||||||||||||| Sbjct: 154140 tccccacccacccacccaca 154121
>ref|NM_008178.1| Mus musculus genomic screened homeo box 1 (Gsh1), mRNA Length = 1786 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 184 gcgcccccgccggcccccgc 203 |||||||||||||||||||| Sbjct: 859 gcgcccccgccggcccccgc 840
>gb|AC133202.3| Mus musculus BAC clone RP23-83P19 from 8, complete sequence Length = 150932 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 53 ccccacccacccacccacac 72 |||||||||||||||||||| Sbjct: 8803 ccccacccacccacccacac 8822
>gb|AC140415.3| Mus musculus BAC clone RP23-127A20 from 13, complete sequence Length = 221245 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 53 ccccacccacccacccacac 72 |||||||||||||||||||| Sbjct: 13242 ccccacccacccacccacac 13261
>emb|BX072536.4| Mouse DNA sequence from clone RP23-5A21 on chromosome X, complete sequence Length = 246587 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 332 aataaagttgcttggtgaac 351 |||||||||||||||||||| Sbjct: 54018 aataaagttgcttggtgaac 53999
>emb|CT030182.8| Mouse DNA sequence from clone RP23-21N15 on chromosome 13, complete sequence Length = 218811 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 29 ccacacccacaacctgacac 48 |||||||||||||||||||| Sbjct: 168418 ccacacccacaacctgacac 168399
>emb|AL928912.10| Mouse DNA sequence from clone RP23-209L8 on chromosome 2, complete sequence Length = 136821 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 53 ccccacccacccacccacac 72 |||||||||||||||||||| Sbjct: 95625 ccccacccacccacccacac 95644
>gb|AC132247.3| Mus musculus BAC clone RP24-424J1 from 19, complete sequence Length = 187078 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 53 ccccacccacccacccacac 72 |||||||||||||||||||| Sbjct: 97780 ccccacccacccacccacac 97761
>emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB 122 of Yarrowia lipolytica Length = 4224103 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 aagccgtcgtctcgaactcc 20 |||||||||||||||||||| Sbjct: 2312109 aagccgtcgtctcgaactcc 2312128
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 81 ggcgcgggaggcggccgacg 100 |||||||||||||||||||| Sbjct: 1344144 ggcgcgggaggcggccgacg 1344163
>gb|AC139295.5| Mus musculus BAC clone RP24-131B6 from chromosome 1, complete sequence Length = 175592 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 53 ccccacccacccacccacac 72 |||||||||||||||||||| Sbjct: 97584 ccccacccacccacccacac 97565
>gb|U21224.1|MMU21224 Mus musculus homeobox Gsh-1 mRNA, complete cds Length = 1786 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 184 gcgcccccgccggcccccgc 203 |||||||||||||||||||| Sbjct: 859 gcgcccccgccggcccccgc 840
>gb|AC169676.2| Mus musculus BAC clone RP24-163P20 from chromosome 17, complete sequence Length = 150204 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 53 ccccacccacccacccacac 72 |||||||||||||||||||| Sbjct: 84455 ccccacccacccacccacac 84474
>gb|L31529.1|HUMBSYN2 Human beta1-syntrophin (SNT B1) gene, complete cds Length = 2978 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 78 gctggcgcgggaggcggccg 97 |||||||||||||||||||| Sbjct: 326 gctggcgcgggaggcggccg 345
>emb|AL596384.17| Mouse DNA sequence from clone RP23-353J21 on chromosome 11, complete sequence Length = 219695 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 53 ccccacccacccacccacac 72 |||||||||||||||||||| Sbjct: 204853 ccccacccacccacccacac 204872
>emb|AL596331.15| Mouse DNA sequence from clone RP23-81G14 on chromosome 11, complete sequence Length = 228391 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 185 cgcccccgccggcccccgcgccgc 208 ||||||||||||||||||| |||| Sbjct: 168619 cgcccccgccggcccccgccccgc 168642
>emb|AL683810.10| Mouse DNA sequence from clone RP23-10L18 on chromosome 2, complete sequence Length = 186882 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 54 cccacccacccacccacacg 73 |||||||||||||||||||| Sbjct: 168646 cccacccacccacccacacg 168665
>emb|AL591495.12| Mouse DNA sequence from clone RP23-61O3 on chromosome 2, complete sequence Length = 239758 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 48 cccatccccacccacccacc 67 |||||||||||||||||||| Sbjct: 157754 cccatccccacccacccacc 157735
>emb|AJ011033.1|MMU011033 Mus musculus kcc2 gene, exons 1 to 6, partial Length = 10288 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 48 cccatccccacccacccacc 67 |||||||||||||||||||| Sbjct: 8232 cccatccccacccacccacc 8213 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,603,545 Number of Sequences: 3902068 Number of extensions: 4603545 Number of successful extensions: 142824 Number of sequences better than 10.0: 255 Number of HSP's better than 10.0 without gapping: 256 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 139466 Number of HSP's gapped (non-prelim): 3347 length of query: 486 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 464 effective length of database: 17,147,199,772 effective search space: 7956300694208 effective search space used: 7956300694208 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)