ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast79e04 |
|---|---|
| Clone Library Name | barley_pub |
>HSF1_ARATH (P41151) Heat shock factor protein 1 (HSF 1) (Heat shock| transcription factor 1) (HSTF 1) Length = 495 Score = 90.1 bits (222), Expect = 3e-18 Identities = 40/60 (66%), Positives = 47/60 (78%) Frame = +1 Query: 184 PFVWKTYRMVEDPGTDGVIGWGKGNNSFVVADPFVFSQTMLPAHFKHNNFSSFVRQLNTY 363 PF+ KTY MVEDP TD ++ W NNSF+V DP FS+ +LP +FKHNNFSSFVRQLNTY Sbjct: 52 PFLSKTYDMVEDPATDAIVSWSPTNNSFIVWDPPEFSRDLLPKYFKHNNFSSFVRQLNTY 111
>HSF8_LYCPE (P41153) Heat shock factor protein HSF8 (Heat shock transcription| factor 8) (HSTF 8) (Heat stress transcription factor) Length = 527 Score = 87.4 bits (215), Expect = 2e-17 Identities = 39/60 (65%), Positives = 47/60 (78%) Frame = +1 Query: 184 PFVWKTYRMVEDPGTDGVIGWGKGNNSFVVADPFVFSQTMLPAHFKHNNFSSFVRQLNTY 363 PF+ KTY MV+DP TD ++ W NNSFVV DP F++ +LP +FKHNNFSSFVRQLNTY Sbjct: 41 PFLVKTYDMVDDPSTDKIVSWSPTNNSFVVWDPPEFAKDLLPKYFKHNNFSSFVRQLNTY 100
>HSF8_LYCES (Q40152) Heat shock factor protein HSF8 (Heat shock transcription| factor 8) (HSTF 8) (Heat stress transcription factor) Length = 527 Score = 87.4 bits (215), Expect = 2e-17 Identities = 39/60 (65%), Positives = 47/60 (78%) Frame = +1 Query: 184 PFVWKTYRMVEDPGTDGVIGWGKGNNSFVVADPFVFSQTMLPAHFKHNNFSSFVRQLNTY 363 PF+ KTY MV+DP TD ++ W NNSFVV DP F++ +LP +FKHNNFSSFVRQLNTY Sbjct: 39 PFLVKTYDMVDDPSTDKIVSWSPTNNSFVVWDPPEFAKDLLPKYFKHNNFSSFVRQLNTY 98
>HSF2_ARATH (Q9SCW5) Heat shock factor protein 2 (HSF 2) (Heat shock| transcription factor 2) (HSTF 2) Length = 468 Score = 84.0 bits (206), Expect = 2e-16 Identities = 39/60 (65%), Positives = 46/60 (76%) Frame = +1 Query: 184 PFVWKTYRMVEDPGTDGVIGWGKGNNSFVVADPFVFSQTMLPAHFKHNNFSSFVRQLNTY 363 PF+ KTY MV+DP TD V+ W GNNSFVV + F++ LP +FKHNNFSSFVRQLNTY Sbjct: 23 PFLSKTYDMVDDPLTDDVVSWSSGNNSFVVWNVPEFAKQFLPKYFKHNNFSSFVRQLNTY 82
>HSF3_ARATH (O81821) Heat shock factor protein 3 (HSF 3) (Heat shock| transcription factor 3) (HSTF 3) Length = 481 Score = 84.0 bits (206), Expect = 2e-16 Identities = 39/60 (65%), Positives = 46/60 (76%) Frame = +1 Query: 184 PFVWKTYRMVEDPGTDGVIGWGKGNNSFVVADPFVFSQTMLPAHFKHNNFSSFVRQLNTY 363 PF+ KTY MV+DP T+ V+ W GNNSFVV FS+ +LP +FKHNNFSSFVRQLNTY Sbjct: 27 PFLSKTYDMVDDPLTNEVVSWSSGNNSFVVWSAPEFSKVLLPKYFKHNNFSSFVRQLNTY 86
>HSF30_LYCPE (P41152) Heat shock factor protein HSF30 (Heat shock transcription| factor 30) (HSTF 30) (Heat stress transcription factor) Length = 351 Score = 81.6 bits (200), Expect = 1e-15 Identities = 38/60 (63%), Positives = 43/60 (71%) Frame = +1 Query: 184 PFVWKTYRMVEDPGTDGVIGWGKGNNSFVVADPFVFSQTMLPAHFKHNNFSSFVRQLNTY 363 PF+ KTY MVED TD VI W NSF+V D FS T+LP FKH+NFSSF+RQLNTY Sbjct: 31 PFLSKTYEMVEDSSTDQVISWSTTRNSFIVWDSHKFSTTLLPRFFKHSNFSSFIRQLNTY 90
>HSF6_ARATH (Q9SCW4) Heat shock factor protein 6 (HSF 6) (Heat shock| transcription factor 6) (HSTF 6) Length = 299 Score = 80.1 bits (196), Expect = 3e-15 Identities = 35/60 (58%), Positives = 45/60 (75%) Frame = +1 Query: 184 PFVWKTYRMVEDPGTDGVIGWGKGNNSFVVADPFVFSQTMLPAHFKHNNFSSFVRQLNTY 363 PF+ KT+ +VED D VI W + +SF+V +P F++ +LP HFKHNNFSSFVRQLNTY Sbjct: 23 PFLTKTFNLVEDSSIDDVISWNEDGSSFIVWNPTDFAKDLLPKHFKHNNFSSFVRQLNTY 82
>HSF7_ARATH (Q9T0D3) Heat shock factor protein 7 (HSF 7) (Heat shock| transcription factor 7) (HSTF 7) Length = 377 Score = 77.4 bits (189), Expect = 2e-14 Identities = 34/60 (56%), Positives = 45/60 (75%) Frame = +1 Query: 184 PFVWKTYRMVEDPGTDGVIGWGKGNNSFVVADPFVFSQTMLPAHFKHNNFSSFVRQLNTY 363 PF+ KTY++VEDP D +I W + +F+V P F++ +LP +FKHNNFSSFVRQLNTY Sbjct: 59 PFLTKTYQLVEDPVYDELISWNEDGTTFIVWRPAEFARDLLPKYFKHNNFSSFVRQLNTY 118
>HSF24_LYCPE (P22335) Heat shock factor protein HSF24 (Heat shock transcription| factor 24) (HSTF 24) (Heat stress transcription factor) Length = 301 Score = 75.1 bits (183), Expect = 1e-13 Identities = 34/60 (56%), Positives = 44/60 (73%) Frame = +1 Query: 184 PFVWKTYRMVEDPGTDGVIGWGKGNNSFVVADPFVFSQTMLPAHFKHNNFSSFVRQLNTY 363 PF+ KTY++V+D TD VI W + +FVV F++ +LP +FKHNNFSSFVRQLNTY Sbjct: 9 PFLLKTYQLVDDAATDDVISWNEIGTTFVVWKTAEFAKDLLPKYFKHNNFSSFVRQLNTY 68
>HSF4_ARATH (Q96320) Heat shock factor protein 4 (HSF 4) (Heat shock| transcription factor 4) (HSTF 4) Length = 284 Score = 74.3 bits (181), Expect = 2e-13 Identities = 32/60 (53%), Positives = 44/60 (73%) Frame = +1 Query: 184 PFVWKTYRMVEDPGTDGVIGWGKGNNSFVVADPFVFSQTMLPAHFKHNNFSSFVRQLNTY 363 PF+ KTY++V+D TD V+ W + +FVV F++ +LP +FKHNNFSSF+RQLNTY Sbjct: 14 PFLSKTYQLVDDHSTDDVVSWNEEGTAFVVWKTAEFAKDLLPQYFKHNNFSSFIRQLNTY 73
>HSF5_ARATH (Q9S7U5) Heat shock factor protein 5 (HSF 5) (Heat shock| transcription factor 5) (HSTF 5) Length = 374 Score = 72.8 bits (177), Expect = 5e-13 Identities = 34/61 (55%), Positives = 43/61 (70%), Gaps = 1/61 (1%) Frame = +1 Query: 184 PFVWKTYRMVEDPGTDGVIGWG-KGNNSFVVADPFVFSQTMLPAHFKHNNFSSFVRQLNT 360 PF+ K Y MV+D TD +I W +NSFV+ D VFS +LP +FKH+NFSSF+RQLN Sbjct: 19 PFLRKCYDMVDDSTTDSIISWSPSADNSFVILDTTVFSVQLLPKYFKHSNFSSFIRQLNI 78 Query: 361 Y 363 Y Sbjct: 79 Y 79
>PRR1_SCHPO (O14283) Transcription factor prr1 (Pombe response regulator 1)| Length = 539 Score = 66.6 bits (161), Expect = 4e-11 Identities = 29/59 (49%), Positives = 41/59 (69%) Frame = +1 Query: 187 FVWKTYRMVEDPGTDGVIGWGKGNNSFVVADPFVFSQTMLPAHFKHNNFSSFVRQLNTY 363 FV K + M+E+P ++ W +SF+V D F++T+LP HFKH+NF+SFVRQLN Y Sbjct: 10 FVRKLFNMLEEPEYRHILRWSDSGDSFIVLDTNEFTKTILPRHFKHSNFASFVRQLNKY 68
>HSF1_CHICK (P38529) Heat shock factor protein 1 (HSF 1) (Heat shock| transcription factor 1) (HSTF 1) (HSF 3A) (HSTF 3A) Length = 491 Score = 66.6 bits (161), Expect = 4e-11 Identities = 33/67 (49%), Positives = 44/67 (65%), Gaps = 1/67 (1%) Frame = +1 Query: 187 FVWKTYRMVEDPGTDGVIGWGKGNNSFVVADPFVFSQTMLPAHFKHNNFSSFVRQLNTY- 363 F+ K + +VEDP TD +I W NSF V D F++ +LP +FKHNN +SFVRQLN Y Sbjct: 23 FLTKLWTLVEDPETDPLICWSPSGNSFHVFDQGQFAKEVLPKYFKHNNMASFVRQLNMYG 82 Query: 364 VSPLIHI 384 ++HI Sbjct: 83 FRKVVHI 89
>HSF1_HUMAN (Q00613) Heat shock factor protein 1 (HSF 1) (Heat shock| transcription factor 1) (HSTF 1) Length = 529 Score = 65.9 bits (159), Expect = 7e-11 Identities = 32/67 (47%), Positives = 43/67 (64%), Gaps = 1/67 (1%) Frame = +1 Query: 187 FVWKTYRMVEDPGTDGVIGWGKGNNSFVVADPFVFSQTMLPAHFKHNNFSSFVRQLNTY- 363 F+ K + +V DP TD +I W NSF V D F++ +LP +FKHNN +SFVRQLN Y Sbjct: 18 FLTKLWTLVSDPDTDALICWSPSGNSFHVFDQGQFAKEVLPKYFKHNNMASFVRQLNMYG 77 Query: 364 VSPLIHI 384 ++HI Sbjct: 78 FRKVVHI 84
>HSF1_MOUSE (P38532) Heat shock factor protein 1 (HSF 1) (Heat shock| transcription factor 1) (HSTF 1) Length = 525 Score = 65.9 bits (159), Expect = 7e-11 Identities = 32/67 (47%), Positives = 43/67 (64%), Gaps = 1/67 (1%) Frame = +1 Query: 187 FVWKTYRMVEDPGTDGVIGWGKGNNSFVVADPFVFSQTMLPAHFKHNNFSSFVRQLNTY- 363 F+ K + +V DP TD +I W NSF V D F++ +LP +FKHNN +SFVRQLN Y Sbjct: 18 FLTKLWTLVSDPDTDALICWSPSGNSFHVFDQGQFAKEVLPKYFKHNNMASFVRQLNMYG 77 Query: 364 VSPLIHI 384 ++HI Sbjct: 78 FRKVVHI 84
>HSF_XENLA (P41154) Heat shock factor protein (HSF) (Heat shock transcription| factor) (HSTF) Length = 451 Score = 65.9 bits (159), Expect = 7e-11 Identities = 33/67 (49%), Positives = 44/67 (65%), Gaps = 1/67 (1%) Frame = +1 Query: 187 FVWKTYRMVEDPGTDGVIGWGKGNNSFVVADPFVFSQTMLPAHFKHNNFSSFVRQLNTY- 363 F+ K + +VEDP TD +I W NSF V D F++ +LP +FKHNN +SFVRQLN Y Sbjct: 15 FLAKLWTLVEDPDTDPLICWSPEGNSFHVFDQGQFAKEVLPKYFKHNNMASFVRQLNMYG 74 Query: 364 VSPLIHI 384 ++HI Sbjct: 75 FRKVVHI 81
>HSF4_HUMAN (Q9ULV5) Heat shock factor protein 4 (HSF 4) (Heat shock| transcription factor 4) (HSTF 4) (hHSF4) Length = 493 Score = 65.5 bits (158), Expect = 9e-11 Identities = 29/59 (49%), Positives = 41/59 (69%) Frame = +1 Query: 187 FVWKTYRMVEDPGTDGVIGWGKGNNSFVVADPFVFSQTMLPAHFKHNNFSSFVRQLNTY 363 F+ K + +V DPGTD +I W SF+V+D F++ +LP +FKH+N +SFVRQLN Y Sbjct: 21 FLGKLWALVGDPGTDHLIRWSPSGTSFLVSDQSRFAKEVLPQYFKHSNMASFVRQLNMY 79
>HSF4_MOUSE (Q9R0L1) Heat shock factor protein 4 (HSF 4) (Heat shock| transcription factor 4) (HSTF 4) (mHSF4) Length = 492 Score = 65.5 bits (158), Expect = 9e-11 Identities = 29/59 (49%), Positives = 41/59 (69%) Frame = +1 Query: 187 FVWKTYRMVEDPGTDGVIGWGKGNNSFVVADPFVFSQTMLPAHFKHNNFSSFVRQLNTY 363 F+ K + +V DPGTD +I W SF+V+D F++ +LP +FKH+N +SFVRQLN Y Sbjct: 20 FLGKLWALVGDPGTDHLIRWSPSGTSFLVSDQSRFAKEVLPQYFKHSNMASFVRQLNMY 78
>HSF3_CHICK (P38531) Heat shock factor protein 3 (HSF 3) (Heat shock| transcription factor 3) (HSTF 3) (HSF 3C) (HSTF 3C) Length = 467 Score = 65.1 bits (157), Expect = 1e-10 Identities = 28/59 (47%), Positives = 40/59 (67%) Frame = +1 Query: 187 FVWKTYRMVEDPGTDGVIGWGKGNNSFVVADPFVFSQTMLPAHFKHNNFSSFVRQLNTY 363 F+ K + +VEDP +D VI W + +F + D F++ +LP +FKHNN SSF+RQLN Y Sbjct: 19 FLAKLWALVEDPQSDDVICWSRNGENFCILDEQRFAKELLPKYFKHNNISSFIRQLNMY 77
>HSF_SCHPO (Q02953) Heat shock factor protein (HSF) (Heat shock transcription| factor) (HSTF) Length = 609 Score = 63.9 bits (154), Expect = 2e-10 Identities = 30/56 (53%), Positives = 37/56 (66%) Frame = +1 Query: 196 KTYRMVEDPGTDGVIGWGKGNNSFVVADPFVFSQTMLPAHFKHNNFSSFVRQLNTY 363 K Y MV D TD +I W +SF+V F++ +LP +FKHNNFSSFVRQLN Y Sbjct: 56 KLYNMVNDSSTDSLIRWSDRGDSFLVIGHEDFAKLVLPRYFKHNNFSSFVRQLNMY 111
>HSF_DROME (P22813) Heat shock factor protein (HSF) (Heat shock transcription| factor) (HSTF) Length = 691 Score = 60.8 bits (146), Expect = 2e-09 Identities = 26/59 (44%), Positives = 41/59 (69%) Frame = +1 Query: 187 FVWKTYRMVEDPGTDGVIGWGKGNNSFVVADPFVFSQTMLPAHFKHNNFSSFVRQLNTY 363 F+ K +R+V+D T+ +I W K SFV+ + F++ +LP ++KHNN +SF+RQLN Y Sbjct: 49 FLAKLWRLVDDADTNRLICWTKDGQSFVIQNQAQFAKELLPLNYKHNNMASFIRQLNMY 107
>SKN7_YEAST (P38889) Transcription factor SKN7 (Peroxide sensitivity protein| POS9) Length = 622 Score = 60.5 bits (145), Expect = 3e-09 Identities = 28/59 (47%), Positives = 39/59 (66%) Frame = +1 Query: 187 FVWKTYRMVEDPGTDGVIGWGKGNNSFVVADPFVFSQTMLPAHFKHNNFSSFVRQLNTY 363 FV K +R++E+ ++ W + SFVV D F+ +LP HFKH+NF+SFVRQLN Y Sbjct: 87 FVRKLFRILENNEYPDIVTWTENGKSFVVLDTGKFTTHILPNHFKHSNFASFVRQLNKY 145
>HSF2_HUMAN (Q03933) Heat shock factor protein 2 (HSF 2) (Heat shock| transcription factor 2) (HSTF 2) Length = 536 Score = 59.3 bits (142), Expect = 6e-09 Identities = 29/67 (43%), Positives = 43/67 (64%), Gaps = 1/67 (1%) Frame = +1 Query: 187 FVWKTYRMVEDPGTDGVIGWGKGNNSFVVADPFVFSQTMLPAHFKHNNFSSFVRQLNTY- 363 F+ K + +VE+ T+ I W + SF+V D F++ +LP +FKHNN +SFVRQLN Y Sbjct: 10 FLSKLWTLVEETHTNEFITWSQNGQSFLVLDEQRFAKEILPKYFKHNNMASFVRQLNMYG 69 Query: 364 VSPLIHI 384 ++HI Sbjct: 70 FRKVVHI 76
>HSF2_MOUSE (P38533) Heat shock factor protein 2 (HSF 2) (Heat shock| transcription factor 2) (HSTF 2) Length = 535 Score = 59.3 bits (142), Expect = 6e-09 Identities = 29/67 (43%), Positives = 43/67 (64%), Gaps = 1/67 (1%) Frame = +1 Query: 187 FVWKTYRMVEDPGTDGVIGWGKGNNSFVVADPFVFSQTMLPAHFKHNNFSSFVRQLNTY- 363 F+ K + +VE+ T+ I W + SF+V D F++ +LP +FKHNN +SFVRQLN Y Sbjct: 10 FLSKLWTLVEETHTNEFITWSQNGQSFLVLDEQRFAKEILPKYFKHNNMASFVRQLNMYG 69 Query: 364 VSPLIHI 384 ++HI Sbjct: 70 FRKVVHI 76
>HSF_KLULA (P22121) Heat shock factor protein (HSF) (Heat shock transcription| factor) (HSTF) Length = 677 Score = 56.2 bits (134), Expect = 5e-08 Identities = 28/59 (47%), Positives = 35/59 (59%) Frame = +1 Query: 187 FVWKTYRMVEDPGTDGVIGWGKGNNSFVVADPFVFSQTMLPAHFKHNNFSSFVRQLNTY 363 FV K + MV D + I W S VV + F Q +LP +FKH+NF+SFVRQLN Y Sbjct: 197 FVNKLWSMVNDKSNEKFIHWSTSGESIVVPNRERFVQEVLPKYFKHSNFASFVRQLNMY 255
>HSF_YEAST (P10961) Heat shock factor protein (HSF) (Heat shock transcription| factor) (HSTF) Length = 833 Score = 55.8 bits (133), Expect = 7e-08 Identities = 26/59 (44%), Positives = 36/59 (61%) Frame = +1 Query: 187 FVWKTYRMVEDPGTDGVIGWGKGNNSFVVADPFVFSQTMLPAHFKHNNFSSFVRQLNTY 363 FV K + M+ D +I W + SF+V + F +LP +FKH+NF+SFVRQLN Y Sbjct: 175 FVNKLWSMLNDDSNTKLIQWAEDGKSFIVTNREEFVHQILPKYFKHSNFASFVRQLNMY 233
>HSF2_CHICK (P38530) Heat shock factor protein 2 (HSF 2) (Heat shock| transcription factor 2) (HSTF 2) (HSF 3B) (HSTF 3B) Length = 564 Score = 55.5 bits (132), Expect = 9e-08 Identities = 25/59 (42%), Positives = 39/59 (66%) Frame = +1 Query: 187 FVWKTYRMVEDPGTDGVIGWGKGNNSFVVADPFVFSQTMLPAHFKHNNFSSFVRQLNTY 363 F+ K + +V + ++ +I W + SF+V D F++ +LP +FKHNN +SFVRQLN Y Sbjct: 24 FLSKLWALVGEAPSNQLITWSQNGQSFLVLDEQRFAKEILPKYFKHNNMASFVRQLNMY 82
>SFL1_YEAST (P20134) Flocculation suppression protein (SFL1 protein)| Length = 766 Score = 47.0 bits (110), Expect = 3e-05 Identities = 24/59 (40%), Positives = 34/59 (57%) Frame = +1 Query: 187 FVWKTYRMVEDPGTDGVIGWGKGNNSFVVADPFVFSQTMLPAHFKHNNFSSFVRQLNTY 363 F+ K Y+++ED +I W SF++ FS+ L +FKH N +SFVRQLN Y Sbjct: 65 FIHKLYQILEDESLHDLIWWTPSGLSFMIKPVERFSKA-LATYFKHTNITSFVRQLNIY 122
>MGA1_YEAST (P53050) Protein MGA1| Length = 456 Score = 38.9 bits (89), Expect = 0.009 Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 2/61 (3%) Frame = +1 Query: 187 FVWKTYRMVEDPGTDGVIGWGKGNNSFVVADPFV--FSQTMLPAHFKHNNFSSFVRQLNT 360 FV + + ++ +P + I W +N+ P+ FS +L +FKH N +SFVRQL+ Sbjct: 6 FVHQLHAILLEPEVNKWIYWSPTDNTVFFLKPYDPNFSTHVLKRYFKHGNVNSFVRQLHM 65 Query: 361 Y 363 Y Sbjct: 66 Y 66
>YJ9L_YEAST (P47175) Hypothetical 41.2 kDa protein in RPS4A-BAT2 intergenic| region Length = 358 Score = 38.5 bits (88), Expect = 0.011 Identities = 17/59 (28%), Positives = 32/59 (54%) Frame = +1 Query: 187 FVWKTYRMVEDPGTDGVIGWGKGNNSFVVADPFVFSQTMLPAHFKHNNFSSFVRQLNTY 363 FV K Y +++ +I W + V+ +P F++ +L F + F++FV+QL+ Y Sbjct: 13 FVSKLYHLLQGNAYSNIIQWSTDGSKLVIWNPDQFTKVILERFFGIHTFAAFVKQLSKY 71
>CTLA4_RABIT (P42072) Cytotoxic T-lymphocyte protein 4 precursor (Cytotoxic| T-lymphocyte-associated antigen 4) (CTLA-4) (CD152 antigen) Length = 223 Score = 28.9 bits (63), Expect = 8.9 Identities = 16/53 (30%), Positives = 24/53 (45%), Gaps = 7/53 (13%) Frame = +1 Query: 367 SPLIHITNPPFVLSIS-------CTYLDSXREREREISVLRVEYSSYVRVCTL 504 S +H++ P VL+ S C Y S + E ++VLR S VC + Sbjct: 35 SKALHVSQPAVVLASSRGVASFVCEYASSHKATEVRVTVLRQANSQMTEVCAM 87 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 49,559,832 Number of Sequences: 219361 Number of extensions: 778969 Number of successful extensions: 2012 Number of sequences better than 10.0: 31 Number of HSP's better than 10.0 without gapping: 1990 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2009 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3927707336 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
