>UCRI_RAT (P20788) Ubiquinol-cytochrome c reductase iron-sulfur subunit,|
           mitochondrial precursor (EC 1.10.2.2) (Rieske
           iron-sulfur protein) (RISP) (Liver regeneration-related
           protein LRRGT00195)
          Length = 274

 Score = 28.5 bits (62), Expect = 6.6
 Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 6/36 (16%)
 Frame = -1

Query: 415 AVPVDARPPLLR------CRRNLSDLAADEPVVAVV 326
           AVP  + PP+L       CR +LS  AA  P+VA V
Sbjct: 33  AVPATSEPPVLDVKRPFLCRESLSGQAATRPLVATV 68

>TIM44_MOUSE (O35857) Import inner membrane translocase subunit TIM44,|
           mitochondrial precursor
          Length = 452

 Score = 28.1 bits (61), Expect = 8.6
 Identities = 13/24 (54%), Positives = 13/24 (54%)
 Frame = +2

Query: 134 ADPRRRGGWCCRPVRVLAQGAQLL 205
           A  R RGGWC  P R L  G Q L
Sbjct: 2   AAARLRGGWCRCPRRCLGSGIQFL 25


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,656,618
Number of Sequences: 219361
Number of extensions: 292019
Number of successful extensions: 988
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 972
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 988
length of database: 80,573,946
effective HSP length: 100
effective length of database: 58,637,846
effective search space used: 2228238148
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)