ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast79e03 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 95.6 bits (48), Expect = 1e-16 Identities = 72/80 (90%) Strand = Plus / Minus Query: 165 gccgaccagtacgtgttctcgcccaaggcgcccagctgctcgagccggtggcgcgagctg 224 ||||||| |||||| ||||| || ||||||||||||||||||||||||||||| ||| || Sbjct: 27635608 gccgacccgtacgttttctctcctaaggcgcccagctgctcgagccggtggcgggagttg 27635549 Query: 225 ctcgggctcaagagggcggc 244 |||||||| ||||| ||||| Sbjct: 27635548 ctcgggctgaagagagcggc 27635529
>dbj|AP006055.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0778G11 Length = 59211 Score = 95.6 bits (48), Expect = 1e-16 Identities = 72/80 (90%) Strand = Plus / Minus Query: 165 gccgaccagtacgtgttctcgcccaaggcgcccagctgctcgagccggtggcgcgagctg 224 ||||||| |||||| ||||| || ||||||||||||||||||||||||||||| ||| || Sbjct: 39791 gccgacccgtacgttttctctcctaaggcgcccagctgctcgagccggtggcgggagttg 39732 Query: 225 ctcgggctcaagagggcggc 244 |||||||| ||||| ||||| Sbjct: 39731 ctcgggctgaagagagcggc 39712
>dbj|AK109610.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-137-G02, full insert sequence Length = 1936 Score = 95.6 bits (48), Expect = 1e-16 Identities = 72/80 (90%) Strand = Plus / Minus Query: 165 gccgaccagtacgtgttctcgcccaaggcgcccagctgctcgagccggtggcgcgagctg 224 ||||||| |||||| ||||| || ||||||||||||||||||||||||||||| ||| || Sbjct: 805 gccgacccgtacgttttctctcctaaggcgcccagctgctcgagccggtggcgggagttg 746 Query: 225 ctcgggctcaagagggcggc 244 |||||||| ||||| ||||| Sbjct: 745 ctcgggctgaagagagcggc 726
>dbj|AK060681.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-029-D12, full insert sequence Length = 1645 Score = 95.6 bits (48), Expect = 1e-16 Identities = 72/80 (90%) Strand = Plus / Plus Query: 165 gccgaccagtacgtgttctcgcccaaggcgcccagctgctcgagccggtggcgcgagctg 224 ||||||| |||||| ||||| || ||||||||||||||||||||||||||||| ||| || Sbjct: 555 gccgacccgtacgttttctctcctaaggcgcccagctgctcgagccggtggcgggagttg 614 Query: 225 ctcgggctcaagagggcggc 244 |||||||| ||||| ||||| Sbjct: 615 ctcgggctgaagagagcggc 634
>dbj|AK102712.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033104O20, full insert sequence Length = 1562 Score = 87.7 bits (44), Expect = 3e-14 Identities = 71/80 (88%) Strand = Plus / Plus Query: 165 gccgaccagtacgtgttctcgcccaaggcgcccagctgctcgagccggtggcgcgagctg 224 ||||||| |||||| ||||| || ||||||||||||||||||||||||||||| || || Sbjct: 556 gccgacccgtacgttttctctcctaaggcgcccagctgctcgagccggtggcggaagttg 615 Query: 225 ctcgggctcaagagggcggc 244 |||||||| ||||| ||||| Sbjct: 616 ctcgggctgaagagagcggc 635
>ref|XM_464229.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1735 Score = 61.9 bits (31), Expect = 2e-06 Identities = 61/71 (85%) Strand = Plus / Plus Query: 167 cgaccagtacgtgttctcgcccaaggcgcccagctgctcgagccggtggcgcgagctgct 226 ||||| |||||||||||| ||||||||||| | ||||||||| ||||| | |||||||| Sbjct: 464 cgacccgtacgtgttctcacccaaggcgccgacgtgctcgagcaggtggagggagctgct 523 Query: 227 cgggctcaaga 237 | |||| |||| Sbjct: 524 ccggctgaaga 534
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 61.9 bits (31), Expect = 2e-06 Identities = 61/71 (85%) Strand = Plus / Plus Query: 167 cgaccagtacgtgttctcgcccaaggcgcccagctgctcgagccggtggcgcgagctgct 226 ||||| |||||||||||| ||||||||||| | ||||||||| ||||| | |||||||| Sbjct: 3541394 cgacccgtacgtgttctcacccaaggcgccgacgtgctcgagcaggtggagggagctgct 3541453 Query: 227 cgggctcaaga 237 | |||| |||| Sbjct: 3541454 ccggctgaaga 3541464 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 329 gacggcgacgacgggctcgtcggc 352 |||||||||| ||||||||||||| Sbjct: 34578173 gacggcgacggcgggctcgtcggc 34578150 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 347 gtcggcggcgaggtcgctca 366 |||||||||||||||||||| Sbjct: 11550125 gtcggcggcgaggtcgctca 11550144 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 141 cgcggcggcgcggcggctggtgctgccg 168 ||||||||||||||||| | |||||||| Sbjct: 2416009 cgcggcggcgcggcggcagctgctgccg 2415982
>dbj|AP004863.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0023I17 Length = 141852 Score = 61.9 bits (31), Expect = 2e-06 Identities = 61/71 (85%) Strand = Plus / Plus Query: 167 cgaccagtacgtgttctcgcccaaggcgcccagctgctcgagccggtggcgcgagctgct 226 ||||| |||||||||||| ||||||||||| | ||||||||| ||||| | |||||||| Sbjct: 86189 cgacccgtacgtgttctcacccaaggcgccgacgtgctcgagcaggtggagggagctgct 86248 Query: 227 cgggctcaaga 237 | |||| |||| Sbjct: 86249 ccggctgaaga 86259
>dbj|AP005804.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0085K21 Length = 180714 Score = 61.9 bits (31), Expect = 2e-06 Identities = 61/71 (85%) Strand = Plus / Plus Query: 167 cgaccagtacgtgttctcgcccaaggcgcccagctgctcgagccggtggcgcgagctgct 226 ||||| |||||||||||| ||||||||||| | ||||||||| ||||| | |||||||| Sbjct: 22684 cgacccgtacgtgttctcacccaaggcgccgacgtgctcgagcaggtggagggagctgct 22743 Query: 227 cgggctcaaga 237 | |||| |||| Sbjct: 22744 ccggctgaaga 22754
>dbj|AK060547.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-021-G04, full insert sequence Length = 1734 Score = 61.9 bits (31), Expect = 2e-06 Identities = 61/71 (85%) Strand = Plus / Plus Query: 167 cgaccagtacgtgttctcgcccaaggcgcccagctgctcgagccggtggcgcgagctgct 226 ||||| |||||||||||| ||||||||||| | ||||||||| ||||| | |||||||| Sbjct: 464 cgacccgtacgtgttctcacccaaggcgccgacgtgctcgagcaggtggagggagctgct 523 Query: 227 cgggctcaaga 237 | |||| |||| Sbjct: 524 ccggctgaaga 534
>gb|AC092244.2| Drosophila melanogaster clone BACR19N22, complete sequence Length = 171000 Score = 46.1 bits (23), Expect = 0.091 Identities = 23/23 (100%) Strand = Plus / Minus Query: 273 tcgcagtcgcagtcgccgtcgcc 295 ||||||||||||||||||||||| Sbjct: 137927 tcgcagtcgcagtcgccgtcgcc 137905
>ref|NM_001014459.1| Drosophila melanogaster dpr3 CG33516-PA (dpr3) mRNA, complete cds Length = 1848 Score = 46.1 bits (23), Expect = 0.091 Identities = 23/23 (100%) Strand = Plus / Plus Query: 273 tcgcagtcgcagtcgccgtcgcc 295 ||||||||||||||||||||||| Sbjct: 859 tcgcagtcgcagtcgccgtcgcc 881
>gb|AY190948.1| Drosophila pseudoobscura clone DPSF01_06_H12 (D1436) genomic sequence Length = 43025 Score = 46.1 bits (23), Expect = 0.091 Identities = 23/23 (100%) Strand = Plus / Plus Query: 273 tcgcagtcgcagtcgccgtcgcc 295 ||||||||||||||||||||||| Sbjct: 23178 tcgcagtcgcagtcgccgtcgcc 23200
>gb|AE003584.5| Drosophila melanogaster chromosome 2L, section 7 of 83 of the complete sequence Length = 346734 Score = 46.1 bits (23), Expect = 0.091 Identities = 23/23 (100%) Strand = Plus / Minus Query: 273 tcgcagtcgcagtcgccgtcgcc 295 ||||||||||||||||||||||| Sbjct: 182611 tcgcagtcgcagtcgccgtcgcc 182589
>gb|AC004716.1|AC004716 Drosophila melanogaster DNA sequence (P1 DS00164 (D269)), complete sequence Length = 86391 Score = 46.1 bits (23), Expect = 0.091 Identities = 23/23 (100%) Strand = Plus / Minus Query: 273 tcgcagtcgcagtcgccgtcgcc 295 ||||||||||||||||||||||| Sbjct: 38743 tcgcagtcgcagtcgccgtcgcc 38721
>ref|XM_483839.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1523 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 141 cgcggcggcgcggcggctggtg 162 |||||||||||||||||||||| Sbjct: 578 cgcggcggcgcggcggctggtg 599
>ref|XM_480365.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1314 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 61 cggaggctgccgcggcgacggc 82 |||||||||||||||||||||| Sbjct: 762 cggaggctgccgcggcgacggc 783
>ref|XM_380838.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG00662.1) partial mRNA Length = 2100 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 274 cgcagtcgcagtcgccgtcgcc 295 |||||||||||||||||||||| Sbjct: 302 cgcagtcgcagtcgccgtcgcc 323
>emb|X78898.1|SCXIVL S.cerevisiae DNA of chromosome XIV Length = 35161 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 26 tgctgatactgctgctaccgct 47 |||||||||||||||||||||| Sbjct: 3367 tgctgatactgctgctaccgct 3388
>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome Length = 2909809 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Minus Query: 48 gccgcgcctgagccggaggctgccgc 73 |||||||||| ||||||||||||||| Sbjct: 1478385 gccgcgcctgcgccggaggctgccgc 1478360
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 141 cgcggcggcgcggcggctggtg 162 |||||||||||||||||||||| Sbjct: 28339823 cgcggcggcgcggcggctggtg 28339844 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 61 cggaggctgccgcggcgacggc 82 |||||||||||||||||||||| Sbjct: 4635900 cggaggctgccgcggcgacggc 4635921
>dbj|AP005411.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0044E16 Length = 153296 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 141 cgcggcggcgcggcggctggtg 162 |||||||||||||||||||||| Sbjct: 68629 cgcggcggcgcggcggctggtg 68650
>dbj|AP004623.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0705A05 Length = 143765 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 141 cgcggcggcgcggcggctggtg 162 |||||||||||||||||||||| Sbjct: 131638 cgcggcggcgcggcggctggtg 131659
>dbj|AP004590.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0577G06 Length = 58137 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 61 cggaggctgccgcggcgacggc 82 |||||||||||||||||||||| Sbjct: 50405 cggaggctgccgcggcgacggc 50426
>dbj|AK106778.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-115-H02, full insert sequence Length = 1523 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 141 cgcggcggcgcggcggctggtg 162 |||||||||||||||||||||| Sbjct: 578 cgcggcggcgcggcggctggtg 599
>emb|Z71492.1|SCYNL216W S.cerevisiae chromosome XIV reading frame ORF YNL216w Length = 3156 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 26 tgctgatactgctgctaccgct 47 |||||||||||||||||||||| Sbjct: 638 tgctgatactgctgctaccgct 659
>gb|DQ332581.1| Synthetic construct Saccharomyces cerevisiae clone FLH148634.01X RAP1 gene, complete sequence Length = 2484 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 26 tgctgatactgctgctaccgct 47 |||||||||||||||||||||| Sbjct: 261 tgctgatactgctgctaccgct 282
>gb|M18068.1|YSTRAP1A Saccharomyces cerevisiae RAP1 gene, complete cds Length = 3675 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 26 tgctgatactgctgctaccgct 47 |||||||||||||||||||||| Sbjct: 1025 tgctgatactgctgctaccgct 1046
>gb|CP000068.1| Trypanosoma brucei chromosome 5, complete sequence Length = 1608198 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 57 gagccggaggctgccgcggcgacggcacc 85 |||||||||||||| ||||||||| |||| Sbjct: 1563402 gagccggaggctgcagcggcgacgccacc 1563374
>gb|AC159453.1| Trypanosoma brucei chromosome 5 clone RPCI93-5M21, complete sequence Length = 106046 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 57 gagccggaggctgccgcggcgacggcacc 85 |||||||||||||| ||||||||| |||| Sbjct: 61250 gagccggaggctgcagcggcgacgccacc 61222
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 42.1 bits (21), Expect = 1.4 Identities = 30/33 (90%) Strand = Plus / Minus Query: 43 ccgctgccgcgcctgagccggaggctgccgcgg 75 ||||||||||||||| ||||| ||| ||||||| Sbjct: 1796177 ccgctgccgcgcctgcgccggcggcggccgcgg 1796145
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 42.1 bits (21), Expect = 1.4 Identities = 30/33 (90%) Strand = Plus / Minus Query: 125 gccgatgaggccgatccgcggcggcgcggcggc 157 ||||||||||||||| |||| || ||||||||| Sbjct: 2962162 gccgatgaggccgatgcgcgccgtcgcggcggc 2962130 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 342 ggctcgtcggcggcgaggtcg 362 ||||||||||||||||||||| Sbjct: 2767715 ggctcgtcggcggcgaggtcg 2767735
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 42.1 bits (21), Expect = 1.4 Identities = 30/33 (90%) Strand = Plus / Minus Query: 43 ccgctgccgcgcctgagccggaggctgccgcgg 75 ||||||||||||||| ||||| ||| ||||||| Sbjct: 3040166 ccgctgccgcgcctgcgccggcggcggccgcgg 3040134
>gb|AY190953.1| Drosophila virilis clone DVIF01_19_E15 (D1419) genomic sequence Length = 43320 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 273 tcgcagtcgcagtcgccgtcg 293 ||||||||||||||||||||| Sbjct: 14490 tcgcagtcgcagtcgccgtcg 14510
>ref|XM_819865.1| Trypanosoma brucei TREU927 clone RPCI93-5M21 variant surface glycoprotein (Tb927.5.5210) partial mRNA Length = 1446 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 57 gagccggaggctgccgcggcgacggcacc 85 |||||||||||||| ||||||||| |||| Sbjct: 896 gagccggaggctgcagcggcgacgccacc 924
>emb|CR931997.1| Corynebacterium jeikeium K411 complete genome Length = 2462499 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 397 gggcgtccacgggcacggcct 417 ||||||||||||||||||||| Sbjct: 1074780 gggcgtccacgggcacggcct 1074760
>ref|XM_749741.1| Aspergillus fumigatus Af293 argininosuccinate lyase (Afu3g07790) partial mRNA Length = 1323 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 146 cggcgcggcggctggtgctgccgac 170 |||||||||||||||||| |||||| Sbjct: 1285 cggcgcggcggctggtgccgccgac 1261
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 329 gacggcgacgacgggctcgtcggcggcga 357 ||||||||||||| ||||| ||||||||| Sbjct: 1753098 gacggcgacgacgagctcgacggcggcga 1753126
>gb|AY126835.1| Drosophila dunni thomasensis isolate PRT5 Yellow protein precursor (y) gene, exon 1 and partial cds Length = 526 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 274 cgcagtcgcagtcgccgtcgc 294 ||||||||||||||||||||| Sbjct: 121 cgcagtcgcagtcgccgtcgc 101
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 42.1 bits (21), Expect = 1.4 Identities = 30/33 (90%) Strand = Plus / Minus Query: 125 gccgatgaggccgatccgcggcggcgcggcggc 157 ||||||||||||||| |||| || ||||||||| Sbjct: 1140719 gccgatgaggccgatgcgcgccgtcgcggcggc 1140687 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 342 ggctcgtcggcggcgaggtcg 362 ||||||||||||||||||||| Sbjct: 948236 ggctcgtcggcggcgaggtcg 948256
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 42.1 bits (21), Expect = 1.4 Identities = 30/33 (90%) Strand = Plus / Minus Query: 43 ccgctgccgcgcctgagccggaggctgccgcgg 75 ||||||||||||||| ||||| ||| ||||||| Sbjct: 2770129 ccgctgccgcgcctgcgccggcggcggccgcgg 2770097
>gb|AC104609.10| Drosophila melanogaster X BAC RP98-39F18 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 165014 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 187 ccaaggcgcccagctgctcga 207 ||||||||||||||||||||| Sbjct: 45946 ccaaggcgcccagctgctcga 45966 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 272 ctcgcagtcgcagtcgccgt 291 |||||||||||||||||||| Sbjct: 66493 ctcgcagtcgcagtcgccgt 66512
>ref|NM_169854.1| Drosophila melanogaster CG31212-RA (CG31212), mRNA Length = 5238 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 72 gcggcgacggcacctcccgcgcggc 96 |||||||||||||| |||||||||| Sbjct: 4572 gcggcgacggcaccacccgcgcggc 4596
>ref|NM_136485.2| Drosophila melanogaster CG30377-RA (CG30377), mRNA Length = 3144 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 21 gctgatgctgatactgctgct 41 ||||||||||||||||||||| Sbjct: 722 gctgatgctgatactgctgct 702
>ref|NM_078525.2| Drosophila melanogaster TNF-receptor-associated factor 2 CG10961-RA (Traf2), mRNA Length = 2777 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 187 ccaaggcgcccagctgctcga 207 ||||||||||||||||||||| Sbjct: 1132 ccaaggcgcccagctgctcga 1112
>gb|AY069786.1| Drosophila melanogaster SD02886 full length cDNA Length = 5162 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 72 gcggcgacggcacctcccgcgcggc 96 |||||||||||||| |||||||||| Sbjct: 4477 gcggcgacggcaccacccgcgcggc 4501
>gb|AY047501.1| Drosophila melanogaster GH01161 full length cDNA Length = 2785 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 187 ccaaggcgcccagctgctcga 207 ||||||||||||||||||||| Sbjct: 1132 ccaaggcgcccagctgctcga 1112
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 342 ggctcgtcggcggcgaggtcg 362 ||||||||||||||||||||| Sbjct: 1181099 ggctcgtcggcggcgaggtcg 1181079
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 142 gcggcggcgcggcggctggtg 162 ||||||||||||||||||||| Sbjct: 9073877 gcggcggcgcggcggctggtg 9073897 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 343 gctcgtcggcggcgaggtcg 362 |||||||||||||||||||| Sbjct: 31604035 gctcgtcggcggcgaggtcg 31604016
>gb|AC007084.7|AC007084 Drosophila melanogaster, chromosome 2R, region 43F-44A, BAC clone BACR26A16, complete sequence Length = 139410 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 21 gctgatgctgatactgctgct 41 ||||||||||||||||||||| Sbjct: 74961 gctgatgctgatactgctgct 74981
>gb|AF369906.1| Sorghum bicolor clone BAC10J22 Sbb3766 sequence Length = 152439 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 142 gcggcggcgcggcggctggtg 162 ||||||||||||||||||||| Sbjct: 372 gcggcggcgcggcggctggtg 352
>dbj|AP001080.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0499C11 Length = 151369 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 142 gcggcggcgcggcggctggtg 162 ||||||||||||||||||||| Sbjct: 102884 gcggcggcgcggcggctggtg 102904
>dbj|AK121684.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033070C16, full insert sequence Length = 3448 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 142 gcggcggcgcggcggctggtg 162 ||||||||||||||||||||| Sbjct: 267 gcggcggcgcggcggctggtg 287
>gb|AF079838.1|AF079838 Drosophila melanogaster TRAF6 (Traf6) mRNA, complete cds Length = 2500 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 187 ccaaggcgcccagctgctcga 207 ||||||||||||||||||||| Sbjct: 1140 ccaaggcgcccagctgctcga 1120
>gb|AC007053.15|AC007053 Drosophila melanogaster, chromosome 3R, region 92A1-92A2, BAC clone BACR48K23, complete sequence Length = 173564 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 72 gcggcgacggcacctcccgcgcggc 96 |||||||||||||| |||||||||| Sbjct: 128173 gcggcgacggcaccacccgcgcggc 128149
>gb|AF119793.1|AF119793 Drosophila melanogaster TNF-receptor-associated factor 2 (TRAF2) mRNA, complete cds Length = 1580 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 187 ccaaggcgcccagctgctcga 207 ||||||||||||||||||||| Sbjct: 1099 ccaaggcgcccagctgctcga 1079
>gb|AE003726.3| Drosophila melanogaster chromosome 3R, section 64 of 118 of the complete sequence Length = 247876 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 72 gcggcgacggcacctcccgcgcggc 96 |||||||||||||| |||||||||| Sbjct: 23635 gcggcgacggcaccacccgcgcggc 23611
>gb|AE003839.4| Drosophila melanogaster chromosome 2R, section 11 of 73 of the complete sequence Length = 254177 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 21 gctgatgctgatactgctgct 41 ||||||||||||||||||||| Sbjct: 117227 gctgatgctgatactgctgct 117207
>gb|AE003443.2| Drosophila melanogaster chromosome X, section 27 of 74 of the complete sequence Length = 299153 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 187 ccaaggcgcccagctgctcga 207 ||||||||||||||||||||| Sbjct: 40051 ccaaggcgcccagctgctcga 40071 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 272 ctcgcagtcgcagtcgccgt 291 |||||||||||||||||||| Sbjct: 60598 ctcgcagtcgcagtcgccgt 60617
>gb|AE004969.1| Neisseria gonorrhoeae FA 1090, complete genome Length = 2153922 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 142 gcggcggcgcggcggctggtg 162 ||||||||||||||||||||| Sbjct: 2058394 gcggcggcgcggcggctggtg 2058414
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 342 ggctcgtcggcggcgaggtcg 362 ||||||||||||||||||||| Sbjct: 2086140 ggctcgtcggcggcgaggtcg 2086120 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 138 atccgcggcggcgcggcggc 157 |||||||||||||||||||| Sbjct: 1552526 atccgcggcggcgcggcggc 1552507
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome Length = 3551823 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 140 ccgcggcggcgcggcggctgg 160 ||||||||||||||||||||| Sbjct: 433754 ccgcggcggcgcggcggctgg 433774
>gb|AE005674.1| Shigella flexneri 2a str. 301, complete genome Length = 4607203 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 292 cgccagcggccgcattggcaaaga 315 ||||||| |||||||||||||||| Sbjct: 3185002 cgccagccgccgcattggcaaaga 3185025
>gb|AY829692.1| Uncultured bacterium clone TF60007 nitrogenase iron protein (nifH) gene, partial cds Length = 326 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 190 aggcgcccagctgctcgagc 209 |||||||||||||||||||| Sbjct: 208 aggcgcccagctgctcgagc 189
>gb|DQ224562.1| Uncultured bacterium clone nif1004220L64 dinitrogen reductase (nifH) gene, partial cds Length = 327 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 190 aggcgcccagctgctcgagc 209 |||||||||||||||||||| Sbjct: 208 aggcgcccagctgctcgagc 189
>ref|XM_469030.1| Oryza sativa (japonica cultivar-group), mRNA Length = 372 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 276 cagtcgcagtcgccgtcgcc 295 |||||||||||||||||||| Sbjct: 235 cagtcgcagtcgccgtcgcc 216
>ref|XM_468314.1| Oryza sativa (japonica cultivar-group), mRNA Length = 873 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 329 gacggcgacgacgggctcgtcggc 352 |||||||||| ||||||||||||| Sbjct: 498 gacggcgacggcgggctcgtcggc 521
>ref|XM_465106.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2703 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 347 gtcggcggcgaggtcgctca 366 |||||||||||||||||||| Sbjct: 55 gtcggcggcgaggtcgctca 74
>ref|XM_464130.1| Oryza sativa (japonica cultivar-group), mRNA Length = 441 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 141 cgcggcggcgcggcggctggtgctgccg 168 ||||||||||||||||| | |||||||| Sbjct: 138 cgcggcggcgcggcggcagctgctgccg 111
>ref|NM_191262.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1137 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 343 gctcgtcggcggcgaggtcg 362 |||||||||||||||||||| Sbjct: 40 gctcgtcggcggcgaggtcg 21
>gb|AE014292.2| Brucella suis 1330 chromosome II, complete sequence Length = 1207381 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 104 ggcaatgccggcgtcgccgg 123 |||||||||||||||||||| Sbjct: 794628 ggcaatgccggcgtcgccgg 794609
>gb|AC145381.4| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0024K17 map near S16403, complete sequence Length = 172238 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 276 cagtcgcagtcgccgtcgcc 295 |||||||||||||||||||| Sbjct: 140985 cagtcgcagtcgccgtcgcc 140966
>gb|AC159456.1| Trypanosoma brucei chromosome 8 clone RPCI93-6H23, complete sequence Length = 169646 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 273 tcgcagtcgcagtcgccgtcgcca 296 |||||||||||||||| ||||||| Sbjct: 25315 tcgcagtcgcagtcgcagtcgcca 25338
>gb|CP000071.1| Trypanosoma brucei chromosome 8, complete sequence Length = 2481190 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 273 tcgcagtcgcagtcgccgtcgcca 296 |||||||||||||||| ||||||| Sbjct: 2269110 tcgcagtcgcagtcgcagtcgcca 2269133
>ref|XM_367926.1| Magnaporthe grisea 70-15 chromosome III predicted protein (MG07830.4) partial mRNA Length = 1143 Score = 40.1 bits (20), Expect = 5.6 Identities = 32/36 (88%) Strand = Plus / Minus Query: 273 tcgcagtcgcagtcgccgtcgccagcggccgcattg 308 |||| ||||| ||||||||||||| |||||||||| Sbjct: 308 tcgccgtcgccgtcgccgtcgccacgggccgcattg 273
>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome Length = 3345170 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 337 cgacgggctcgtcggcggcg 356 |||||||||||||||||||| Sbjct: 318529 cgacgggctcgtcggcggcg 318510
>gb|AE009277.1| Agrobacterium tumefaciens str. C58 linear chromosome, section 47 of 187 of the complete sequence Length = 7995 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 143 cggcggcgcggcggctggtgctgc 166 |||||||||||| ||||||||||| Sbjct: 5783 cggcggcgcggcagctggtgctgc 5760
>gb|AE008335.1| Agrobacterium tumefaciens str. C58 linear chromosome, section 139 of 187 of the complete sequence Length = 10645 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 143 cggcggcgcggcggctggtgctgc 166 |||||||||||| ||||||||||| Sbjct: 2214 cggcggcgcggcagctggtgctgc 2237
>gb|AY091907.1| Uncultured nitrogen-fixing bacterium clone Sp16-1 dinitrogenase reductase (nifH) gene, partial cds Length = 414 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 190 aggcgcccagctgctcgagc 209 |||||||||||||||||||| Sbjct: 301 aggcgcccagctgctcgagc 282
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 276 cagtcgcagtcgccgtcgcc 295 |||||||||||||||||||| Sbjct: 25024540 cagtcgcagtcgccgtcgcc 25024521 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 ctgatgctgatactgctgct 41 |||||||||||||||||||| Sbjct: 3905602 ctgatgctgatactgctgct 3905621 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 ctgatgctgatactgctgct 41 |||||||||||||||||||| Sbjct: 3905542 ctgatgctgatactgctgct 3905561
>ref|XM_757226.1| Ustilago maydis 521 hypothetical protein (UM06172.1) partial mRNA Length = 1347 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 26 tgctgatactgctgctaccgctgc 49 ||||| |||||||||||||||||| Sbjct: 25 tgctgctactgctgctaccgctgc 48
>ref|XM_819938.1| Trypanosoma brucei TREU927 clone RPCI93-6H23 hypothetical protein (Tb927.8.7800) partial mRNA Length = 3603 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 273 tcgcagtcgcagtcgccgtcgcca 296 |||||||||||||||| ||||||| Sbjct: 670 tcgcagtcgcagtcgcagtcgcca 693
>ref|XM_539498.2| PREDICTED: Canis familiaris similar to pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 8 (LOC482381), mRNA Length = 2367 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 268 cgccctcgcagtcgcagtcgccgtcgcc 295 ||||||||| ||||| |||||||||||| Sbjct: 739 cgccctcgccgtcgccgtcgccgtcgcc 712
>gb|AY331188.1| Methylobacterium extorquens AM1 phytoene desaturase (crtI) gene, complete cds Length = 1773 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 343 gctcgtcggcggcgaggtcg 362 |||||||||||||||||||| Sbjct: 919 gctcgtcggcggcgaggtcg 938
>gb|AY805478.1| Uncultured bacterium clone CR30 carbon monoxide dehydrogenase form II large subunit gene, partial cds Length = 948 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 343 gctcgtcggcggcgaggtcg 362 |||||||||||||||||||| Sbjct: 79 gctcgtcggcggcgaggtcg 60
>gb|AY805470.1| Uncultured bacterium clone CR10 carbon monoxide dehydrogenase form II large subunit gene, partial cds Length = 945 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 343 gctcgtcggcggcgaggtcg 362 |||||||||||||||||||| Sbjct: 79 gctcgtcggcggcgaggtcg 60
>gb|CP000302.1| Shewanella denitrificans OS217, complete genome Length = 4545906 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 147 ggcgcggcggctggtgctgc 166 |||||||||||||||||||| Sbjct: 2587670 ggcgcggcggctggtgctgc 2587689
>gb|U00096.2| Escherichia coli K-12 MG1655, complete genome Length = 4639675 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 292 cgccagcggccgcattggcaaaga 315 ||||||| |||||||||||||||| Sbjct: 3193899 cgccagccgccgcattggcaaaga 3193922
>gb|AC138001.2| Oryza sativa chromosome 3 BAC OSJNBa0093M23 genomic sequence, complete sequence Length = 170020 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 276 cagtcgcagtcgccgtcgcc 295 |||||||||||||||||||| Sbjct: 56347 cagtcgcagtcgccgtcgcc 56328
>emb|CR555306.1| Azoarcus sp. EbN1 complete genome Length = 4296230 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 340 cgggctcgtcggcggcgagg 359 |||||||||||||||||||| Sbjct: 2286021 cgggctcgtcggcggcgagg 2286040
>emb|BX640443.1| Bordetella bronchiseptica strain RB50, complete genome; segment 7/16 Length = 346274 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 330 acggcgacgacgggctcgtc 349 |||||||||||||||||||| Sbjct: 224525 acggcgacgacgggctcgtc 224544
>emb|BX640429.1| Bordetella parapertussis strain 12822, complete genome; segment 7/14 Length = 344321 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 330 acggcgacgacgggctcgtc 349 |||||||||||||||||||| Sbjct: 23413 acggcgacgacgggctcgtc 23432
>gb|AC169376.2| Sorghum bicolor clone SB_BBc0046M17, complete sequence Length = 127914 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 268 cgccctcgcagtcgcagtcgccgtcgcc 295 ||||||||| ||||| |||||||||||| Sbjct: 18261 cgccctcgccgtcgccgtcgccgtcgcc 18234
>gb|DQ351275.1| Streptomyces sp. NRRL 30748 meridamycin biosynthetic gene cluster and flanking regions Length = 116831 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 144 ggcggcgcggcggctggtgctgccgacc 171 ||||||||||||| ||| |||||||||| Sbjct: 46106 ggcggcgcggcgggtggagctgccgacc 46133
>gb|DQ098231.1| Uncultured nitrogen-fixing bacterium clone C43 dinitrogenase reductase (nifH) gene, partial cds Length = 361 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 190 aggcgcccagctgctcgagc 209 |||||||||||||||||||| Sbjct: 226 aggcgcccagctgctcgagc 207
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 141 cgcggcggcgcggcggctgg 160 |||||||||||||||||||| Sbjct: 3840771 cgcggcggcgcggcggctgg 3840752
>gb|AC091209.3| Drosophila melanogaster 3L BAC RP98-3G6 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 194979 Score = 40.1 bits (20), Expect = 5.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 268 cgccctcgcagtcgcagtcgccgtcgccagcg 299 |||| ||||||||||||||| ||||| ||||| Sbjct: 119124 cgccgtcgcagtcgcagtcgacgtcggcagcg 119093
>dbj|AP009048.1| Escherichia coli W3110 DNA, complete genome Length = 4646332 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 292 cgccagcggccgcattggcaaaga 315 ||||||| |||||||||||||||| Sbjct: 3194533 cgccagccgccgcattggcaaaga 3194556
>gb|AY119549.1| Drosophila melanogaster GH26507 full insert cDNA Length = 5131 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 272 ctcgcagtcgcagtcgccgt 291 |||||||||||||||||||| Sbjct: 373 ctcgcagtcgcagtcgccgt 354
>gb|AC010071.6| Drosophila melanogaster 3L BAC RP98-18G16 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 172540 Score = 40.1 bits (20), Expect = 5.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 268 cgccctcgcagtcgcagtcgccgtcgccagcg 299 |||| ||||||||||||||| ||||| ||||| Sbjct: 137421 cgccgtcgcagtcgcagtcgacgtcggcagcg 137452
>ref|NM_132230.2| Drosophila melanogaster slipper CG2272-RA (slpr), mRNA Length = 5131 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 272 ctcgcagtcgcagtcgccgt 291 |||||||||||||||||||| Sbjct: 373 ctcgcagtcgcagtcgccgt 354
>gb|AY045717.1| Drosophila melanogaster mixed lineage protein kinase (slpr) mRNA, complete cds Length = 5129 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 272 ctcgcagtcgcagtcgccgt 291 |||||||||||||||||||| Sbjct: 373 ctcgcagtcgcagtcgccgt 354
>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome Length = 3561584 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 141 cgcggcggcgcggcggctgg 160 |||||||||||||||||||| Sbjct: 825520 cgcggcggcgcggcggctgg 825501
>gb|AF518561.1| Unidentified nitrogen-fixing bacteria dinitrogenase reductase (nifH) gene, partial cds Length = 327 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 190 aggcgcccagctgctcgagc 209 |||||||||||||||||||| Sbjct: 208 aggcgcccagctgctcgagc 189
>gb|AE016820.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome VII, complete sequence Length = 1476513 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 141 cgcggcggcgcggcggctggtgct 164 |||||| ||||||||||||||||| Sbjct: 772216 cgcggccgcgcggcggctggtgct 772193
>gb|AF386507.1|AF386507 Streptomyces lavendulae complestatin biosynthetic gene cluster, complete sequence Length = 55972 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 210 cggtggcgcgagctgctcgg 229 |||||||||||||||||||| Sbjct: 20398 cggtggcgcgagctgctcgg 20417
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 40.1 bits (20), Expect = 5.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 328 cgacggcgacgacgggctcgtcggcggcgagg 359 |||||||||||| | |||||||||||||||| Sbjct: 906988 cgacggcgacgatgtcctcgtcggcggcgagg 907019
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 276 cagtcgcagtcgccgtcgcc 295 |||||||||||||||||||| Sbjct: 25115857 cagtcgcagtcgccgtcgcc 25115838 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 ctgatgctgatactgctgct 41 |||||||||||||||||||| Sbjct: 3905713 ctgatgctgatactgctgct 3905732 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 ctgatgctgatactgctgct 41 |||||||||||||||||||| Sbjct: 3905653 ctgatgctgatactgctgct 3905672
>gb|AC126221.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0015N19, complete sequence Length = 168430 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 ctgatgctgatactgctgct 41 |||||||||||||||||||| Sbjct: 112075 ctgatgctgatactgctgct 112094 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 ctgatgctgatactgctgct 41 |||||||||||||||||||| Sbjct: 112015 ctgatgctgatactgctgct 112034
>gb|AE009684.1| Brucella melitensis 16M chromosome II, section 46 of 107 of the complete sequence Length = 11838 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 104 ggcaatgccggcgtcgccgg 123 |||||||||||||||||||| Sbjct: 5641 ggcaatgccggcgtcgccgg 5660
>dbj|AP003268.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0503C12 Length = 147180 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 343 gctcgtcggcggcgaggtcg 362 |||||||||||||||||||| Sbjct: 17767 gctcgtcggcggcgaggtcg 17748
>dbj|AP003249.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0435B05 Length = 150997 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 343 gctcgtcggcggcgaggtcg 362 |||||||||||||||||||| Sbjct: 117058 gctcgtcggcggcgaggtcg 117039
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 331 cggcgacgacgggctcgtcggcggcgag 358 |||||||| |||||||||||||||||| Sbjct: 5920440 cggcgacggagggctcgtcggcggcgag 5920467
>gb|AE014073.1| Shigella flexneri 2a str. 2457T, complete genome Length = 4599354 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 292 cgccagcggccgcattggcaaaga 315 ||||||| |||||||||||||||| Sbjct: 3173665 cgccagccgccgcattggcaaaga 3173688
>dbj|AP005534.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0030M21 Length = 155970 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 347 gtcggcggcgaggtcgctca 366 |||||||||||||||||||| Sbjct: 132617 gtcggcggcgaggtcgctca 132636
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 147 ggcgcggcggctggtgctgc 166 |||||||||||||||||||| Sbjct: 1507459 ggcgcggcggctggtgctgc 1507478
>gb|AE017224.1| Brucella abortus biovar 1 str. 9-941 chromosome II, complete sequence Length = 1162204 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 104 ggcaatgccggcgtcgccgg 123 |||||||||||||||||||| Sbjct: 422548 ggcaatgccggcgtcgccgg 422567
>dbj|AP004064.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1520_C09 Length = 145553 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 329 gacggcgacgacgggctcgtcggc 352 |||||||||| ||||||||||||| Sbjct: 89113 gacggcgacggcgggctcgtcggc 89090
>dbj|AP003996.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1112_G06 Length = 122580 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 329 gacggcgacgacgggctcgtcggc 352 |||||||||| ||||||||||||| Sbjct: 44788 gacggcgacggcgggctcgtcggc 44765
>dbj|AP005649.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0064G16 Length = 166453 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 141 cgcggcggcgcggcggctggtgctgccg 168 ||||||||||||||||| | |||||||| Sbjct: 31930 cgcggcggcgcggcggcagctgctgccg 31903
>ref|XM_555893.1| Anopheles gambiae str. PEST ENSANGP00000026239 (ENSANGG00000024777), partial mRNA Length = 546 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 21 gctgatgctgatactgctgctaccgctg 48 |||||||||| | ||||||||||||||| Sbjct: 426 gctgatgctgctgctgctgctaccgctg 399
>dbj|AK109650.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-140-A11, full insert sequence Length = 879 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 329 gacggcgacgacgggctcgtcggc 352 |||||||||| ||||||||||||| Sbjct: 504 gacggcgacggcgggctcgtcggc 527
>ref|NM_211760.1| Eremothecium gossypii AGR033Wp (AGR033W), mRNA Length = 762 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 141 cgcggcggcgcggcggctggtgct 164 |||||| ||||||||||||||||| Sbjct: 399 cgcggccgcgcggcggctggtgct 376
>gb|AE003532.3| Drosophila melanogaster chromosome 3L, section 53 of 83 of the complete sequence Length = 295875 Score = 40.1 bits (20), Expect = 5.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 268 cgccctcgcagtcgcagtcgccgtcgccagcg 299 |||| ||||||||||||||| ||||| ||||| Sbjct: 179677 cgccgtcgcagtcgcagtcgacgtcggcagcg 179646
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 328 cgacggcgacgacgggctcgtcggcggc 355 ||||||||||||| |||||| ||||||| Sbjct: 544785 cgacggcgacgactggctcgacggcggc 544812
>emb|AL772305.15| Mouse DNA sequence from clone RP23-86E8 on chromosome 4, complete sequence Length = 260935 Score = 40.1 bits (20), Expect = 5.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 21 gctgatgctgatactgctgctaccgctgccgc 52 |||| ||||| | ||||||||||||||||||| Sbjct: 253633 gctgctgctgctgctgctgctaccgctgccgc 253602
>gb|AF010139.1|AF010139 Azotobacter vinelandii iron-sulfur cluster assembly gene cluster, suhB, cysE2, iscS, iscU, iscA, hscB, hscA and fdx genes complete cds; ndk gene, partial cds Length = 7886 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 133 ggccgatccgcggcggcgcg 152 |||||||||||||||||||| Sbjct: 5148 ggccgatccgcggcggcgcg 5167
>emb|AM040265.1| Brucella melitensis biovar Abortus chromosome II, complete sequence, strain 2308 Length = 1156948 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 104 ggcaatgccggcgtcgccgg 123 |||||||||||||||||||| Sbjct: 422561 ggcaatgccggcgtcgccgg 422580
>gb|AC168019.4| Culex pipiens quinquefasciatus, clone Culex pipiens quinquefasciatus-3940127D9, complete sequence Length = 102832 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 gacggcacctcccgcgcggc 96 |||||||||||||||||||| Sbjct: 70217 gacggcacctcccgcgcggc 70236
>gb|U28379.1|ECU28379 Escherichia coli K-12 genome; approximately 68 minutes Length = 25638 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 292 cgccagcggccgcattggcaaaga 315 ||||||| |||||||||||||||| Sbjct: 672 cgccagccgccgcattggcaaaga 695
>gb|CP000036.1| Shigella boydii Sb227, complete genome Length = 4519823 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 292 cgccagcggccgcattggcaaaga 315 ||||||| |||||||||||||||| Sbjct: 2910523 cgccagccgccgcattggcaaaga 2910546
>gb|CP000038.1| Shigella sonnei Ss046, complete genome Length = 4825265 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 292 cgccagcggccgcattggcaaaga 315 ||||||| |||||||||||||||| Sbjct: 3350125 cgccagccgccgcattggcaaaga 3350148 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,942,870 Number of Sequences: 3902068 Number of extensions: 2942870 Number of successful extensions: 90443 Number of sequences better than 10.0: 132 Number of HSP's better than 10.0 without gapping: 138 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 83734 Number of HSP's gapped (non-prelim): 6699 length of query: 418 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 396 effective length of database: 17,147,199,772 effective search space: 6790291109712 effective search space used: 6790291109712 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
