ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast79d11 |
|---|---|
| Clone Library Name | barley_pub |
>ODPA_SOLTU (P52903) Pyruvate dehydrogenase E1 component alpha subunit,| mitochondrial precursor (EC 1.2.4.1) (PDHE1-A) Length = 391 Score = 157 bits (398), Expect = 1e-38 Identities = 77/111 (69%), Positives = 85/111 (76%) Frame = +1 Query: 136 SDSTEPLTVETSIPFTSHIVDPPSREVTTTPRELAAAFRDMALMRRAEIAADSLYKAKLI 315 SDST +TVETS+PFTSH +DPPSR V T+P+EL F+DM MRR EIAADSLYKAKLI Sbjct: 28 SDSTATITVETSLPFTSHNIDPPSRSVETSPKELMTFFKDMTEMRRMEIAADSLYKAKLI 87 Query: 316 RGFCHLYDGQEAVAVGMEXXXXXXXXXXXXYRDHCLYLARGGDLVAAFAEL 468 RGFCHLYDGQEAVAVGME YRDHC++L RGG LV AFAEL Sbjct: 88 RGFCHLYDGQEAVAVGMEAAITKKDCIITAYRDHCIFLGRGGTLVEAFAEL 138
>ODPA_PEA (P52902) Pyruvate dehydrogenase E1 component alpha subunit,| mitochondrial precursor (EC 1.2.4.1) (PDHE1-A) Length = 397 Score = 151 bits (382), Expect = 7e-37 Identities = 74/111 (66%), Positives = 83/111 (74%) Frame = +1 Query: 136 SDSTEPLTVETSIPFTSHIVDPPSREVTTTPRELAAAFRDMALMRRAEIAADSLYKAKLI 315 SD+T LT+ETS+PFT+H DPPSR VTT+P EL + FR MALMRR EIAADSLYKA LI Sbjct: 34 SDTTATLTIETSLPFTAHNCDPPSRSVTTSPSELLSFFRTMALMRRMEIAADSLYKANLI 93 Query: 316 RGFCHLYDGQEAVAVGMEXXXXXXXXXXXXYRDHCLYLARGGDLVAAFAEL 468 RGFCHLYDGQEAVAVGME YRDHC +L RGG L+ +AEL Sbjct: 94 RGFCHLYDGQEAVAVGMEAGTTKKDCIITAYRDHCTFLGRGGTLLRVYAEL 144
>ODPA_ARATH (P52901) Pyruvate dehydrogenase E1 component alpha subunit,| mitochondrial precursor (EC 1.2.4.1) (PDHE1-A) Length = 389 Score = 149 bits (376), Expect = 4e-36 Identities = 71/114 (62%), Positives = 84/114 (73%) Frame = +1 Query: 127 RGVSDSTEPLTVETSIPFTSHIVDPPSREVTTTPRELAAAFRDMALMRRAEIAADSLYKA 306 R +S T P+T+ETS+PFT+H+ DPPSR V ++ +EL FR MALMRR EIAADSLYKA Sbjct: 23 RLISTDTTPITIETSLPFTAHLCDPPSRSVESSSQELLDFFRTMALMRRMEIAADSLYKA 82 Query: 307 KLIRGFCHLYDGQEAVAVGMEXXXXXXXXXXXXYRDHCLYLARGGDLVAAFAEL 468 KLIRGFCHLYDGQEAVA+GME YRDHC++L RGG L F+EL Sbjct: 83 KLIRGFCHLYDGQEAVAIGMEAAITKKDAIITAYRDHCIFLGRGGSLHEVFSEL 136
>ODPA_YEAST (P16387) Pyruvate dehydrogenase E1 component alpha subunit,| mitochondrial precursor (EC 1.2.4.1) (PDHE1-A) Length = 420 Score = 86.7 bits (213), Expect = 3e-17 Identities = 45/107 (42%), Positives = 61/107 (57%), Gaps = 3/107 (2%) Frame = +1 Query: 157 TVETSIP---FTSHIVDPPSREVTTTPRELAAAFRDMALMRRAEIAADSLYKAKLIRGFC 327 TV+ +P F S++++PP T+ L ++DM ++RR E+A D+LYKAK IRGFC Sbjct: 52 TVQIELPESSFESYMLEPPDLSYETSKATLLQMYKDMVIIRRMEMACDALYKAKKIRGFC 111 Query: 328 HLYDGQEAVAVGMEXXXXXXXXXXXXYRDHCLYLARGGDLVAAFAEL 468 HL GQEA+AVG+E YR H RG + A AEL Sbjct: 112 HLSVGQEAIAVGIENAITKLDSIITSYRCHGFTFMRGASVKAVLAEL 158
>ODPA_KLULA (O13366) Pyruvate dehydrogenase E1 component alpha subunit,| mitochondrial precursor (EC 1.2.4.1) (PDHE1-A) Length = 412 Score = 82.0 bits (201), Expect = 7e-16 Identities = 48/118 (40%), Positives = 64/118 (54%), Gaps = 6/118 (5%) Frame = +1 Query: 133 VSDSTEPLT---VETSIPFTS---HIVDPPSREVTTTPRELAAAFRDMALMRRAEIAADS 294 V+D T+P V+ +P TS +++D P TT L ++DM ++RR E+A D+ Sbjct: 33 VADETKPGDDDLVQIDLPETSFEGYLLDVPELSYQTTKSNLLQMYKDMIIVRRMEMACDA 92 Query: 295 LYKAKLIRGFCHLYDGQEAVAVGMEXXXXXXXXXXXXYRDHCLYLARGGDLVAAFAEL 468 LYKAK IRGFCH GQEA+AVG+E YR H RG + A AEL Sbjct: 93 LYKAKKIRGFCHSSVGQEAIAVGIENAITKRDTVITSYRCHGFTYMRGAAVQAVLAEL 150
>ODPA_SCHPO (Q10489) Pyruvate dehydrogenase E1 component alpha subunit,| mitochondrial precursor (EC 1.2.4.1) (PDHE1-A) Length = 409 Score = 80.1 bits (196), Expect = 3e-15 Identities = 44/110 (40%), Positives = 58/110 (52%) Frame = +1 Query: 139 DSTEPLTVETSIPFTSHIVDPPSREVTTTPRELAAAFRDMALMRRAEIAADSLYKAKLIR 318 D P+ ++ S+ F + +D PS E+ T EL + M +RR E+A D+LYKAK IR Sbjct: 47 DKPFPVKLDDSV-FEGYKIDVPSTEIEVTKGELLGLYEKMVTIRRLELACDALYKAKKIR 105 Query: 319 GFCHLYDGQEAVAVGMEXXXXXXXXXXXXYRDHCLYLARGGDLVAAFAEL 468 GFCHL GQEAVA G+E YR H RG + + EL Sbjct: 106 GFCHLSIGQEAVAAGIEGAITLDDSIITSYRCHGFAYTRGLSIRSIIGEL 155
>ODPAT_RAT (Q06437) Pyruvate dehydrogenase E1 component alpha subunit,| testis-specific form, mitochondrial precursor (EC 1.2.4.1) (PDHE1-A type II) Length = 391 Score = 71.6 bits (174), Expect = 9e-13 Identities = 40/90 (44%), Positives = 49/90 (54%) Frame = +1 Query: 199 PPSREVTTTPRELAAAFRDMALMRRAEIAADSLYKAKLIRGFCHLYDGQEAVAVGMEXXX 378 PP+ V T E +R+M ++RR E+ AD LYK K IRGFCHL DGQEA VG+E Sbjct: 51 PPTSTVLTR-EEALKYYRNMQVIRRMELKADQLYKQKFIRGFCHLCDGQEACNVGLEAGI 109 Query: 379 XXXXXXXXXYRDHCLYLARGGDLVAAFAEL 468 YR H L RG + + AEL Sbjct: 110 NPTDHIITSYRAHGLCYTRGLSVKSILAEL 139
>ODPA_CAEEL (P52899) Probable pyruvate dehydrogenase E1 component alpha| subunit, mitochondrial precursor (EC 1.2.4.1) (PDHE1-A) Length = 397 Score = 71.2 bits (173), Expect = 1e-12 Identities = 38/89 (42%), Positives = 46/89 (51%) Frame = +1 Query: 202 PSREVTTTPRELAAAFRDMALMRRAEIAADSLYKAKLIRGFCHLYDGQEAVAVGMEXXXX 381 P+ VT + +RDM ++RR E AA +LYK K IRGFCHLY GQEA AVGM+ Sbjct: 44 PNTSVTLNREDALKYYRDMQVIRRMESAAGNLYKEKKIRGFCHLYSGQEACAVGMKAAMT 103 Query: 382 XXXXXXXXYRDHCLYLARGGDLVAAFAEL 468 YR H G + AEL Sbjct: 104 EGDAVITAYRCHGWTWLLGATVTEVLAEL 132
>ODPAT_MOUSE (P35487) Pyruvate dehydrogenase E1 component alpha subunit,| testis-specific form, mitochondrial precursor (EC 1.2.4.1) (PDHE1-A type II) Length = 391 Score = 69.7 bits (169), Expect = 4e-12 Identities = 39/90 (43%), Positives = 47/90 (52%) Frame = +1 Query: 199 PPSREVTTTPRELAAAFRDMALMRRAEIAADSLYKAKLIRGFCHLYDGQEAVAVGMEXXX 378 PP+ V T L +R M ++RR E+ AD LYK K IRGFCHL DGQEA VG+E Sbjct: 51 PPTSTVLTRAEALKY-YRTMQVIRRMELKADQLYKQKFIRGFCHLCDGQEACCVGLEAGI 109 Query: 379 XXXXXXXXXYRDHCLYLARGGDLVAAFAEL 468 YR H RG + + AEL Sbjct: 110 NPTDHVITSYRAHGFCYTRGLSVKSILAEL 139
>ODPA_SMIMA (P52900) Pyruvate dehydrogenase E1 component alpha subunit,| mitochondrial precursor (EC 1.2.4.1) (PDHE1-A) (Fragment) Length = 363 Score = 68.2 bits (165), Expect = 1e-11 Identities = 38/90 (42%), Positives = 47/90 (52%) Frame = +1 Query: 199 PPSREVTTTPRELAAAFRDMALMRRAEIAADSLYKAKLIRGFCHLYDGQEAVAVGMEXXX 378 PP+ V T L ++ M +RR E+ AD LYK K+IRGFCHLYDGQEA +G+E Sbjct: 23 PPTTAVLTREEGLKY-YKIMQTVRRMELKADQLYKQKIIRGFCHLYDGQEACCMGLEAGI 81 Query: 379 XXXXXXXXXYRDHCLYLARGGDLVAAFAEL 468 YR H RG + AEL Sbjct: 82 NPTDHVITAYRAHGFTYTRGLPVREILAEL 111
>ODPA_RAT (P26284) Pyruvate dehydrogenase E1 component alpha subunit, somatic| form, mitochondrial precursor (EC 1.2.4.1) (PDHE1-A type I) Length = 390 Score = 67.4 bits (163), Expect = 2e-11 Identities = 40/90 (44%), Positives = 46/90 (51%) Frame = +1 Query: 199 PPSREVTTTPRELAAAFRDMALMRRAEIAADSLYKAKLIRGFCHLYDGQEAVAVGMEXXX 378 PP V T L +R M +RR E+ AD LYK K+IRGFCHL DGQEA VG+E Sbjct: 50 PPVTTVLTREDGLKY-YRMMQTVRRMELKADQLYKQKIIRGFCHLCDGQEACCVGLEAGI 108 Query: 379 XXXXXXXXXYRDHCLYLARGGDLVAAFAEL 468 YR H RG + A AEL Sbjct: 109 NPTDHLITAYRAHGFTFNRGHAVRAVLAEL 138
>ODPA_MOUSE (P35486) Pyruvate dehydrogenase E1 component alpha subunit, somatic| form, mitochondrial precursor (EC 1.2.4.1) (PDHE1-A type I) Length = 390 Score = 67.4 bits (163), Expect = 2e-11 Identities = 40/90 (44%), Positives = 46/90 (51%) Frame = +1 Query: 199 PPSREVTTTPRELAAAFRDMALMRRAEIAADSLYKAKLIRGFCHLYDGQEAVAVGMEXXX 378 PP V T L +R M +RR E+ AD LYK K+IRGFCHL DGQEA VG+E Sbjct: 50 PPVTTVLTREDGLKY-YRMMQTVRRMELKADQLYKQKIIRGFCHLCDGQEACCVGLEAGI 108 Query: 379 XXXXXXXXXYRDHCLYLARGGDLVAAFAEL 468 YR H RG + A AEL Sbjct: 109 NPTDHLITAYRAHGFTFTRGLPVRAILAEL 138
>ODPAT_HUMAN (P29803) Pyruvate dehydrogenase E1 component alpha subunit,| testis-specific form, mitochondrial precursor (EC 1.2.4.1) (PDHE1-A type II) Length = 388 Score = 66.6 bits (161), Expect = 3e-11 Identities = 39/90 (43%), Positives = 46/90 (51%) Frame = +1 Query: 199 PPSREVTTTPRELAAAFRDMALMRRAEIAADSLYKAKLIRGFCHLYDGQEAVAVGMEXXX 378 PP V T L +R M +RR E+ AD LYK K IRGFCHL DGQEA VG+E Sbjct: 48 PPVTTVLTRAEGLKY-YRMMLTVRRMELKADQLYKQKFIRGFCHLCDGQEACCVGLEAGI 106 Query: 379 XXXXXXXXXYRDHCLYLARGGDLVAAFAEL 468 YR H + RG + + AEL Sbjct: 107 NPSDHVITSYRAHGVCYTRGLSVRSILAEL 136
>ODPT_ASCSU (P26268) Pyruvate dehydrogenase E1 component alpha subunit type II,| mitochondrial precursor (EC 1.2.4.1) (PDHE1-A) (Fragment) Length = 391 Score = 65.9 bits (159), Expect = 5e-11 Identities = 37/99 (37%), Positives = 46/99 (46%), Gaps = 1/99 (1%) Frame = +1 Query: 175 PFTSHIVDP-PSREVTTTPRELAAAFRDMALMRRAEIAADSLYKAKLIRGFCHLYDGQEA 351 PF H +D P + T + + M +RR E AA +LYK K +RGFCHLY GQEA Sbjct: 31 PFKLHKLDSGPDVNMHVTKEDALRYYTQMQTIRRMETAAGNLYKEKKVRGFCHLYSGQEA 90 Query: 352 VAVGMEXXXXXXXXXXXXYRDHCLYLARGGDLVAAFAEL 468 AVGM+ YR H G + EL Sbjct: 91 CAVGMKAAMEPGDAAITAYRCHGWTYLSGSPVAKVLCEL 129
>ODPA_PONPY (Q5R490) Pyruvate dehydrogenase E1 component alpha subunit, somatic| form, mitochondrial precursor (EC 1.2.4.1) (PDHE1-A type I) Length = 390 Score = 65.9 bits (159), Expect = 5e-11 Identities = 39/90 (43%), Positives = 45/90 (50%) Frame = +1 Query: 199 PPSREVTTTPRELAAAFRDMALMRRAEIAADSLYKAKLIRGFCHLYDGQEAVAVGMEXXX 378 PP V T L +R M +RR E+ AD LYK K+IRGFCHL DGQEA VG+E Sbjct: 50 PPVTTVLTREDGLKY-YRMMQTVRRMELKADQLYKQKIIRGFCHLCDGQEACCVGLEAGI 108 Query: 379 XXXXXXXXXYRDHCLYLARGGDLVAAFAEL 468 YR H RG + AEL Sbjct: 109 NPTDHLITAYRAHGFTFTRGLSVREILAEL 138
>ODPA_MACFA (Q8HXW9) Pyruvate dehydrogenase E1 component alpha subunit, somatic| form, mitochondrial precursor (EC 1.2.4.1) (PDHE1-A type I) Length = 390 Score = 65.9 bits (159), Expect = 5e-11 Identities = 39/90 (43%), Positives = 45/90 (50%) Frame = +1 Query: 199 PPSREVTTTPRELAAAFRDMALMRRAEIAADSLYKAKLIRGFCHLYDGQEAVAVGMEXXX 378 PP V T L +R M +RR E+ AD LYK K+IRGFCHL DGQEA VG+E Sbjct: 50 PPVTTVLTREDGLKY-YRMMQTVRRMELKADQLYKQKIIRGFCHLCDGQEACCVGLEAGI 108 Query: 379 XXXXXXXXXYRDHCLYLARGGDLVAAFAEL 468 YR H RG + AEL Sbjct: 109 NPTDHLITAYRAHGFTFTRGLSVREILAEL 138
>ODPA_HUMAN (P08559) Pyruvate dehydrogenase E1 component alpha subunit, somatic| form, mitochondrial precursor (EC 1.2.4.1) (PDHE1-A type I) Length = 390 Score = 65.9 bits (159), Expect = 5e-11 Identities = 39/90 (43%), Positives = 45/90 (50%) Frame = +1 Query: 199 PPSREVTTTPRELAAAFRDMALMRRAEIAADSLYKAKLIRGFCHLYDGQEAVAVGMEXXX 378 PP V T L +R M +RR E+ AD LYK K+IRGFCHL DGQEA VG+E Sbjct: 50 PPVTTVLTREDGLKY-YRMMQTVRRMELKADQLYKQKIIRGFCHLCDGQEACCVGLEAGI 108 Query: 379 XXXXXXXXXYRDHCLYLARGGDLVAAFAEL 468 YR H RG + AEL Sbjct: 109 NPTDHLITAYRAHGFTFTRGLSVREILAEL 138
>ODPA_PIG (P29804) Pyruvate dehydrogenase E1 component alpha subunit, somatic| form, mitochondrial precursor (EC 1.2.4.1) (PDHE1-A type I) (Fragment) Length = 389 Score = 65.9 bits (159), Expect = 5e-11 Identities = 39/90 (43%), Positives = 45/90 (50%) Frame = +1 Query: 199 PPSREVTTTPRELAAAFRDMALMRRAEIAADSLYKAKLIRGFCHLYDGQEAVAVGMEXXX 378 PP V T L +R M +RR E+ AD LYK K+IRGFCHL DGQEA VG+E Sbjct: 49 PPVTTVLTREDGLKY-YRMMQTVRRMELKADQLYKQKIIRGFCHLCDGQEACCVGLEAGI 107 Query: 379 XXXXXXXXXYRDHCLYLARGGDLVAAFAEL 468 YR H RG + AEL Sbjct: 108 NPTDHLITAYRAHGFTFTRGLSVREILAEL 137
>ODPA_ASCSU (P26267) Pyruvate dehydrogenase E1 component alpha subunit type I,| mitochondrial precursor (EC 1.2.4.1) (PDHE1-A) Length = 396 Score = 65.5 bits (158), Expect = 7e-11 Identities = 37/99 (37%), Positives = 45/99 (45%), Gaps = 1/99 (1%) Frame = +1 Query: 175 PFTSHIVDP-PSREVTTTPRELAAAFRDMALMRRAEIAADSLYKAKLIRGFCHLYDGQEA 351 PF H +D P V T + + M +RR E AA +LYK K +RGFCHLY GQEA Sbjct: 36 PFKLHKLDSGPDINVHVTKEDAVHYYTQMLTIRRMESAAGNLYKEKKVRGFCHLYSGQEA 95 Query: 352 VAVGMEXXXXXXXXXXXXYRDHCLYLARGGDLVAAFAEL 468 AVG + YR H G + EL Sbjct: 96 CAVGTKAAMDAGDAAVTAYRCHGWTYLSGSSVAKVLCEL 134
>ODPA_ZYMMO (O66112) Pyruvate dehydrogenase E1 component, alpha subunit (EC| 1.2.4.1) Length = 354 Score = 61.6 bits (148), Expect = 1e-09 Identities = 40/115 (34%), Positives = 50/115 (43%), Gaps = 1/115 (0%) Frame = +1 Query: 127 RGVSDSTEPLTVETSIPFTSHIVDPPSREVTTTPRELAAAFRDMALMRRAEIAADSLYKA 306 + DS P + +H + P EL +R M ++RR E LY Sbjct: 3 KATQDSNRPHKADVGSAIPNHDLPPIPGRYHADREELLEFYRRMLMIRRFEERCGQLYGL 62 Query: 307 KLIRGFCHLYDGQEAVAVGMEXXXX-XXXXXXXXYRDHCLYLARGGDLVAAFAEL 468 LI GFCHLY GQEAVAVG++ YR+H LA G D AEL Sbjct: 63 GLIAGFCHLYIGQEAVAVGLQAALQPGRDSVITGYREHGHMLAYGIDPKIVMAEL 117
>ODPA_RHIME (Q9R9N5) Pyruvate dehydrogenase E1 component, alpha subunit (EC| 1.2.4.1) Length = 348 Score = 61.2 bits (147), Expect = 1e-09 Identities = 35/75 (46%), Positives = 39/75 (52%) Frame = +1 Query: 244 AFRDMALMRRAEIAADSLYKAKLIRGFCHLYDGQEAVAVGMEXXXXXXXXXXXXYRDHCL 423 A+R+M L+RR E A LY I GFCHLY GQEAV VGM+ YRDH Sbjct: 39 AYREMLLIRRFEEKAGQLYGMGFIGGFCHLYIGQEAVVVGMQLALKEGDQVITGYRDHGH 98 Query: 424 YLARGGDLVAAFAEL 468 LA G AEL Sbjct: 99 MLACGMSARGVMAEL 113
>ODPA_RICCN (Q92IS3) Pyruvate dehydrogenase E1 component, alpha subunit (EC| 1.2.4.1) Length = 326 Score = 55.1 bits (131), Expect = 9e-08 Identities = 31/82 (37%), Positives = 38/82 (46%) Frame = +1 Query: 223 TPRELAAAFRDMALMRRAEIAADSLYKAKLIRGFCHLYDGQEAVAVGMEXXXXXXXXXXX 402 T E +F+DM L+RR E LY I GFCHLY GQEAV ++ Sbjct: 11 TKEEYIKSFKDMLLLRRFEEKCGQLYGMGEIGGFCHLYIGQEAVISAIDMVKQKGDSTIT 70 Query: 403 XYRDHCLYLARGGDLVAAFAEL 468 YRDH + G + AEL Sbjct: 71 SYRDHAHIILAGTEPKYVLAEL 92
>ODPA_RICPR (Q9ZDR4) Pyruvate dehydrogenase E1 component, alpha subunit (EC| 1.2.4.1) Length = 326 Score = 52.8 bits (125), Expect = 4e-07 Identities = 30/79 (37%), Positives = 36/79 (45%) Frame = +1 Query: 232 ELAAAFRDMALMRRAEIAADSLYKAKLIRGFCHLYDGQEAVAVGMEXXXXXXXXXXXXYR 411 E +F+DM L+RR E LY I GFCHLY GQEAV + YR Sbjct: 14 EYIKSFKDMLLLRRFEEKCGQLYGMGKIGGFCHLYIGQEAVISAVAMIKKKGDSTITSYR 73 Query: 412 DHCLYLARGGDLVAAFAEL 468 DH + G + AEL Sbjct: 74 DHAHIILAGTEPKYVLAEL 92
>ODPA_PORPU (P51267) Pyruvate dehydrogenase E1 component alpha subunit (EC| 1.2.4.1) Length = 344 Score = 49.7 bits (117), Expect = 4e-06 Identities = 31/87 (35%), Positives = 42/87 (48%), Gaps = 1/87 (1%) Frame = +1 Query: 211 EVTTTPRELAAAFRDMALMRRAE-IAADSLYKAKLIRGFCHLYDGQEAVAVGMEXXXXXX 387 ++ T +L + DM L R E + A YK K+ GF HLY+GQEAV+ G+ Sbjct: 16 QINLTKHKLLVLYEDMLLGRNFEDMCAQMYYKGKMF-GFVHLYNGQEAVSTGVIKLLDSK 74 Query: 388 XXXXXXYRDHCLYLARGGDLVAAFAEL 468 YRDH L++G AEL Sbjct: 75 DYVCSTYRDHVHALSKGVPSQNVMAEL 101
>ACOA_RALEU (P27745) Acetoin:2,6-dichlorophenolindophenol oxidoreductase alpha| subunit (EC 1.1.1.-) (Acetoin:DCPIP oxidoreductase-alpha) (AO:DCPIP OR) Length = 332 Score = 35.8 bits (81), Expect = 0.057 Identities = 24/78 (30%), Positives = 33/78 (42%) Frame = +1 Query: 235 LAAAFRDMALMRRAEIAADSLYKAKLIRGFCHLYDGQEAVAVGMEXXXXXXXXXXXXYRD 414 L +R M +R E + I GF HLY G+EA VG+ +R Sbjct: 18 LLTVYRKMRTIRDFEERLHVDFGRGDIPGFVHLYAGEEAAGVGILHHLNDGDRIASTHRG 77 Query: 415 HCLYLARGGDLVAAFAEL 468 H +A+G D VA E+ Sbjct: 78 HGHCIAKGVDPVAMMKEI 95
>NADB_STRCO (Q9X8N8) L-aspartate oxidase (EC 1.4.3.16) (LASPO) (Quinolinate| synthetase B) Length = 580 Score = 30.8 bits (68), Expect = 1.8 Identities = 19/51 (37%), Positives = 22/51 (43%) Frame = -3 Query: 336 VQVAEAPDELRLVERVGGDLGPPHQRHVAEGGRQLPRRGGHLARRRVHDVG 184 + V E PD +R + G H EGG L R GGH RR H G Sbjct: 96 ILVTEGPDAVRRLIATGA-----HFDESTEGGLALTREGGHHRRRIAHAGG 141
>UVRC_NATPD (Q3ITA0) UvrABC system protein C (Protein uvrC) (Excinuclease ABC| subunit C) Length = 575 Score = 30.0 bits (66), Expect = 3.1 Identities = 24/83 (28%), Positives = 36/83 (43%), Gaps = 1/83 (1%) Frame = +1 Query: 124 VRGVSDSTEPLTVETSIPFTSHIVDPPSREVTTTPRELAAAFRDMALMRRAEIAADSLYK 303 VR D + PL + T+H + P E+T TP E A F R E +L + Sbjct: 90 VRLKDDKSYPL-----VQLTAH--EAPRIEITRTPDEAATVFGPYTDKSRVETVVKALRE 142 Query: 304 AKLIRGFC-HLYDGQEAVAVGME 369 +RG H Y+G++ + E Sbjct: 143 TYELRGCSDHKYEGRDRPCLDYE 165
>CO1A2_HUMAN (P08123) Collagen alpha-2(I) chain precursor| Length = 1366 Score = 29.3 bits (64), Expect = 5.3 Identities = 22/60 (36%), Positives = 27/60 (45%), Gaps = 1/60 (1%) Frame = -3 Query: 285 GDLGPPHQRHVAEGGRQLPRRGGHLARRRVHDVGREGDRGLHGE-RLRGVGDPADQRQEP 109 G GPP G + LP G +VG+ G+RGLHGE L G P +R P Sbjct: 547 GPAGPP-------GFQGLPGPSGPAG-----EVGKPGERGLHGEFGLPGPAGPRGERGPP 594
>SFR16_MOUSE (Q8CFC7) Splicing factor, arginine/serine-rich 16 (Suppressor of| white-apricot homolog 2) (Clk4-associating SR-related protein) Length = 653 Score = 28.5 bits (62), Expect = 9.1 Identities = 14/30 (46%), Positives = 16/30 (53%) Frame = -3 Query: 240 RQLPRRGGHLARRRVHDVGREGDRGLHGER 151 R RRGG++ RRR R GDR G R Sbjct: 434 RSPARRGGYVPRRRSRSRSRSGDRYKRGAR 463
>FER_WHEAT (P00228) Ferredoxin, chloroplast precursor| Length = 143 Score = 28.5 bits (62), Expect = 9.1 Identities = 16/47 (34%), Positives = 23/47 (48%) Frame = +1 Query: 175 PFTSHIVDPPSREVTTTPRELAAAFRDMALMRRAEIAADSLYKAKLI 315 PF+ V PP+ V P L+ A +R A + A + YK KL+ Sbjct: 10 PFSLRAVAPPAPRVALAPAALSLAAAKQ--VRGARLRAQATYKVKLV 54
>US02_EHV1B (P28964) Gene 68 protein| Length = 418 Score = 28.5 bits (62), Expect = 9.1 Identities = 16/27 (59%), Positives = 17/27 (62%) Frame = -3 Query: 279 LGPPHQRHVAEGGRQLPRRGGHLARRR 199 LGP +R GGRQL RRGG A RR Sbjct: 393 LGPHLRRSRGRGGRQLQRRGG--AERR 417
>GP112_HUMAN (Q8IZF6) Probable G-protein coupled receptor 112| Length = 2799 Score = 28.5 bits (62), Expect = 9.1 Identities = 22/77 (28%), Positives = 35/77 (45%), Gaps = 11/77 (14%) Frame = +1 Query: 157 TVETSIPFTSHIVDPPSREVTTTPRELAAA-------FRDMALMRRAEIAADSLYKAKLI 315 T + I FT H + P+R + TTP A F+D++L R + + S+ K Sbjct: 431 TTDMKIAFTVHSLTLPTRLIETTPAPRTAETELTSTNFQDVSLPRVEDAMSTSMSKETSS 490 Query: 316 RGFCHL----YDGQEAV 354 + F L + G E+V Sbjct: 491 KTFSFLTSFSFTGTESV 507 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 32,768,407 Number of Sequences: 219361 Number of extensions: 464437 Number of successful extensions: 1803 Number of sequences better than 10.0: 32 Number of HSP's better than 10.0 without gapping: 1732 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1803 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3072927439 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
