| Clone Name | bast79d11 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT016723.1| Zea mays clone Contig556 mRNA sequence Length = 1476 Score = 359 bits (181), Expect = 5e-96 Identities = 301/341 (88%) Strand = Plus / Plus Query: 130 ggggtctccgactccacggagccgctcaccgtggagacctcgatccccttcacgtcccac 189 ||||||||||||||| |||| || ||||||| || |||||| | ||||||| ||||||| Sbjct: 184 ggggtctccgactccgcggacgcggtcaccgttgacacctcggtgcccttcaagtcccac 243 Query: 190 atcgtggacccgccgtcgcgcgaggtgaccaccacgccgcgggagctggcggccgccttc 249 |||||||||||||| ||||||||| |||||| || ||||||||||| | || |||| Sbjct: 244 atcgtggacccgccaccgcgcgaggccaccacctcggcgcgggagctgctgtccttcttc 303 Query: 250 cgcgacatggcgctgatgcggcgggccgagatcgccgccgactcgctctacaaggcgaag 309 ||||||||| |||| |||||||| ||||||||| || ||||||||||||||||| ||| Sbjct: 304 cgcgacatgtcgctcatgcggcgcttcgagatcgcggcggactcgctctacaaggccaag 363 Query: 310 ctcatccggggcttctgccacctgtacgacggccaggaggcggtcgccgtgggcatggag 369 ||||||||||||||||||||||| ||||||||||||||||| |||||||| ||||||||| Sbjct: 364 ctcatccggggcttctgccacctctacgacggccaggaggctgtcgccgtcggcatggag 423 Query: 370 gccgccatcacccgccgcgacgccatcatcaccgcctaccgcgaccactgcctctacctc 429 |||||| ||||||| |||||||||||||||||||||||||||||||||| |||||| Sbjct: 424 gccgccgccacccgcgccgacgccatcatcaccgcctaccgcgaccactgcgcgtacctc 483 Query: 430 gcgcgcggcggggacctcgtggccgccttcgccgagctcat 470 |||||||||||||||| ||| |||||||||||||||||||| Sbjct: 484 gcgcgcggcggggaccccgtcgccgccttcgccgagctcat 524 Score = 48.1 bits (24), Expect = 0.026 Identities = 30/32 (93%) Strand = Plus / Plus Query: 46 cacgccatggccgcggcgatcctccgccgcct 77 ||||||||||||||||| || ||||||||||| Sbjct: 100 cacgccatggccgcggccattctccgccgcct 131
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 299 bits (151), Expect = 4e-78 Identities = 298/347 (85%) Strand = Plus / Plus Query: 124 gtccgcggggtctccgactccacggagccgctcaccgtggagacctcgatccccttcacg 183 ||||| || |||||||| || ||||||||||||||| | ||||||||| |||||| || | Sbjct: 7613471 gtccggggtgtctccgattcgacggagccgctcaccatcgagacctcggtcccctacaag 7613530 Query: 184 tcccacatcgtggacccgccgtcgcgcgaggtgaccaccacgccgcgggagctggcggcc 243 |||||||||||||||||||| ||||||||||| |||||||| |||| ||||| || || Sbjct: 7613531 tcccacatcgtggacccgcccccgcgcgaggtggccaccacggcgcgcgagctcgccacc 7613590 Query: 244 gccttccgcgacatggcgctgatgcggcgggccgagatcgccgccgactcgctctacaag 303 ||||||||||||| | ||||| || || |||||||| || |||||||| |||||| Sbjct: 7613591 ttcttccgcgacatgtccgccatgcgccgcgcggagatcgcggcggactcgctgtacaag 7613650 Query: 304 gcgaagctcatccggggcttctgccacctgtacgacggccaggaggcggtcgccgtgggc 363 |||||||| ||||| |||||||||||||| |||||||| |||||||| ||||| |||||| Sbjct: 7613651 gcgaagctgatccgcggcttctgccacctctacgacggacaggaggccgtcgcggtgggc 7613710 Query: 364 atggaggccgccatcacccgccgcgacgccatcatcaccgcctaccgcgaccactgcctc 423 |||||||| |||| ||||||| ||||||||||||||| |||||||||||||||||| | Sbjct: 7613711 atggaggcggccaccacccgcgccgacgccatcatcacggcctaccgcgaccactgcgcc 7613770 Query: 424 tacctcgcgcgcggcggggacctcgtggccgccttcgccgagctcat 470 |||||||| |||||||| ||||||| ||| ||||||||||||||| Sbjct: 7613771 tacctcgcccgcggcggcgacctcgccgccctcttcgccgagctcat 7613817
>dbj|AP004027.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OJ1136_C11 Length = 124827 Score = 299 bits (151), Expect = 4e-78 Identities = 298/347 (85%) Strand = Plus / Plus Query: 124 gtccgcggggtctccgactccacggagccgctcaccgtggagacctcgatccccttcacg 183 ||||| || |||||||| || ||||||||||||||| | ||||||||| |||||| || | Sbjct: 36726 gtccggggtgtctccgattcgacggagccgctcaccatcgagacctcggtcccctacaag 36785 Query: 184 tcccacatcgtggacccgccgtcgcgcgaggtgaccaccacgccgcgggagctggcggcc 243 |||||||||||||||||||| ||||||||||| |||||||| |||| ||||| || || Sbjct: 36786 tcccacatcgtggacccgcccccgcgcgaggtggccaccacggcgcgcgagctcgccacc 36845 Query: 244 gccttccgcgacatggcgctgatgcggcgggccgagatcgccgccgactcgctctacaag 303 ||||||||||||| | ||||| || || |||||||| || |||||||| |||||| Sbjct: 36846 ttcttccgcgacatgtccgccatgcgccgcgcggagatcgcggcggactcgctgtacaag 36905 Query: 304 gcgaagctcatccggggcttctgccacctgtacgacggccaggaggcggtcgccgtgggc 363 |||||||| ||||| |||||||||||||| |||||||| |||||||| ||||| |||||| Sbjct: 36906 gcgaagctgatccgcggcttctgccacctctacgacggacaggaggccgtcgcggtgggc 36965 Query: 364 atggaggccgccatcacccgccgcgacgccatcatcaccgcctaccgcgaccactgcctc 423 |||||||| |||| ||||||| ||||||||||||||| |||||||||||||||||| | Sbjct: 36966 atggaggcggccaccacccgcgccgacgccatcatcacggcctaccgcgaccactgcgcc 37025 Query: 424 tacctcgcgcgcggcggggacctcgtggccgccttcgccgagctcat 470 |||||||| |||||||| ||||||| ||| ||||||||||||||| Sbjct: 37026 tacctcgcccgcggcggcgacctcgccgccctcttcgccgagctcat 37072
>dbj|AK105105.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-100-E08, full insert sequence Length = 1568 Score = 299 bits (151), Expect = 4e-78 Identities = 298/347 (85%) Strand = Plus / Plus Query: 124 gtccgcggggtctccgactccacggagccgctcaccgtggagacctcgatccccttcacg 183 ||||| || |||||||| || ||||||||||||||| | ||||||||| |||||| || | Sbjct: 291 gtccggggtgtctccgattcgacggagccgctcaccatcgagacctcggtcccctacaag 350 Query: 184 tcccacatcgtggacccgccgtcgcgcgaggtgaccaccacgccgcgggagctggcggcc 243 |||||||||||||||||||| ||||||||||| |||||||| |||| ||||| || || Sbjct: 351 tcccacatcgtggacccgcccccgcgcgaggtggccaccacggcgcgcgagctcgccacc 410 Query: 244 gccttccgcgacatggcgctgatgcggcgggccgagatcgccgccgactcgctctacaag 303 ||||||||||||| | ||||| || || |||||||| || |||||||| |||||| Sbjct: 411 ttcttccgcgacatgtccgccatgcgccgcgcggagatcgcggcggactcgctgtacaag 470 Query: 304 gcgaagctcatccggggcttctgccacctgtacgacggccaggaggcggtcgccgtgggc 363 |||||||| ||||| |||||||||||||| |||||||| |||||||| ||||| |||||| Sbjct: 471 gcgaagctgatccgcggcttctgccacctctacgacggacaggaggccgtcgcggtgggc 530 Query: 364 atggaggccgccatcacccgccgcgacgccatcatcaccgcctaccgcgaccactgcctc 423 |||||||| |||| ||||||| ||||||||||||||| |||||||||||||||||| | Sbjct: 531 atggaggcggccaccacccgcgccgacgccatcatcacggcctaccgcgaccactgcgcc 590 Query: 424 tacctcgcgcgcggcggggacctcgtggccgccttcgccgagctcat 470 |||||||| |||||||| ||||||| ||| ||||||||||||||| Sbjct: 591 tacctcgcccgcggcggcgacctcgccgccctcttcgccgagctcat 637
>gb|BT008951.1| Triticum aestivum clone wdk1c.pk009.n6:fis, full insert mRNA sequence Length = 1670 Score = 280 bits (141), Expect = 4e-72 Identities = 288/337 (85%) Strand = Plus / Plus Query: 134 tctccgactccacggagccgctcaccgtggagacctcgatccccttcacgtcccacatcg 193 ||||||||||||||| |||||||||| | ||||||||||| ||||||||| ||||||||| Sbjct: 96 tctccgactccacggcgccgctcaccatcgagacctcgatgcccttcacggcccacatcg 155 Query: 194 tggacccgccgtcgcgcgaggtgaccaccacgccgcgggagctggcggccgccttccgcg 253 | |||||||| || ||||| || ||||||| || ||||| | ||| ||||| || Sbjct: 156 tcgacccgccctcccgcgacgtcgccaccacccccgccgagctcgtcgccttcttccacg 215 Query: 254 acatggcgctgatgcggcgggccgagatcgccgccgactcgctctacaaggcgaagctca 313 ||||| | || ||||| || ||||||||||||||||||||||||||||| ||||||| Sbjct: 216 acatgtccctcatgcgccgcatggagatcgccgccgactcgctctacaaggccaagctca 275 Query: 314 tccggggcttctgccacctgtacgacggccaggaggcggtcgccgtgggcatggaggccg 373 |||| |||||||||||||| ||||||||||||||||| ||| || ||||||||||||| Sbjct: 276 tccgcggcttctgccacctctacgacggccaggaggccgtctgcgccggcatggaggccg 335 Query: 374 ccatcacccgccgcgacgccatcatcaccgcctaccgcgaccactgcctctacctcgcgc 433 ||||||||||| ||| ||||||||||||||||||||||||||||| ||| |||| | | Sbjct: 336 ccatcacccgcaaggactccatcatcaccgcctaccgcgaccactgcatcttcctctccc 395 Query: 434 gcggcggggacctcgtggccgccttcgccgagctcat 470 ||||||| |||||||| ||||||||||||||||||| Sbjct: 396 gcggcggcgacctcgtcaccgccttcgccgagctcat 432
>ref|XM_467697.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1546 Score = 248 bits (125), Expect = 1e-62 Identities = 284/337 (84%) Strand = Plus / Plus Query: 134 tctccgactccacggagccgctcaccgtggagacctcgatccccttcacgtcccacatcg 193 |||| |||||||||| |||||||||| | ||||||||| |||||||||| |||||||||| Sbjct: 170 tctcggactccacggcgccgctcaccatcgagacctcggtccccttcacctcccacatcg 229 Query: 194 tggacccgccgtcgcgcgaggtgaccaccacgccgcgggagctggcggccgccttccgcg 253 | |||||||| |||||||| || |||||||| ||| ||||| || |||||||| Sbjct: 230 tcgacccgccctcgcgcgacgtcaccaccaccccggccgagctcctcaccttcttccgcg 289 Query: 254 acatggcgctgatgcggcgggccgagatcgccgccgactcgctctacaaggcgaagctca 313 ||||| | ||||||| ||| ||||||||||| || || ||||| ||||| ||||||| Sbjct: 290 acatgtccgtgatgcgccggatggagatcgccgcggattccctctataaggccaagctca 349 Query: 314 tccggggcttctgccacctgtacgacggccaggaggcggtcgccgtgggcatggaggccg 373 |||| || ||||||||||| ||||||||||||||||| |||||||| || |||||||||| Sbjct: 350 tccgcgggttctgccacctctacgacggccaggaggccgtcgccgtcgggatggaggccg 409 Query: 374 ccatcacccgccgcgacgccatcatcaccgcctaccgcgaccactgcctctacctcgcgc 433 ||||||||||| ||| ||||||||||||| |||||||| |||||| ||||||||| | Sbjct: 410 ccatcacccgctccgattccatcatcaccgcgtaccgcgatcactgcacctacctcgcac 469 Query: 434 gcggcggggacctcgtggccgccttcgccgagctcat 470 ||||||| |||||||| |||| ||||| |||||||| Sbjct: 470 gcggcggcgacctcgtctccgcgttcgcggagctcat 506
>ref|XM_506960.1| PREDICTED Oryza sativa (japonica cultivar-group), P0684F11.25 mRNA Length = 1565 Score = 248 bits (125), Expect = 1e-62 Identities = 284/337 (84%) Strand = Plus / Plus Query: 134 tctccgactccacggagccgctcaccgtggagacctcgatccccttcacgtcccacatcg 193 |||| |||||||||| |||||||||| | ||||||||| |||||||||| |||||||||| Sbjct: 169 tctcggactccacggcgccgctcaccatcgagacctcggtccccttcacctcccacatcg 228 Query: 194 tggacccgccgtcgcgcgaggtgaccaccacgccgcgggagctggcggccgccttccgcg 253 | |||||||| |||||||| || |||||||| ||| ||||| || |||||||| Sbjct: 229 tcgacccgccctcgcgcgacgtcaccaccaccccggccgagctcctcaccttcttccgcg 288 Query: 254 acatggcgctgatgcggcgggccgagatcgccgccgactcgctctacaaggcgaagctca 313 ||||| | ||||||| ||| ||||||||||| || || ||||| ||||| ||||||| Sbjct: 289 acatgtccgtgatgcgccggatggagatcgccgcggattccctctataaggccaagctca 348 Query: 314 tccggggcttctgccacctgtacgacggccaggaggcggtcgccgtgggcatggaggccg 373 |||| || ||||||||||| ||||||||||||||||| |||||||| || |||||||||| Sbjct: 349 tccgcgggttctgccacctctacgacggccaggaggccgtcgccgtcgggatggaggccg 408 Query: 374 ccatcacccgccgcgacgccatcatcaccgcctaccgcgaccactgcctctacctcgcgc 433 ||||||||||| ||| ||||||||||||| |||||||| |||||| ||||||||| | Sbjct: 409 ccatcacccgctccgattccatcatcaccgcgtaccgcgatcactgcacctacctcgcac 468 Query: 434 gcggcggggacctcgtggccgccttcgccgagctcat 470 ||||||| |||||||| |||| ||||| |||||||| Sbjct: 469 gcggcggcgacctcgtctccgcgttcgcggagctcat 505
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 248 bits (125), Expect = 1e-62 Identities = 284/337 (84%) Strand = Plus / Minus Query: 134 tctccgactccacggagccgctcaccgtggagacctcgatccccttcacgtcccacatcg 193 |||| |||||||||| |||||||||| | ||||||||| |||||||||| |||||||||| Sbjct: 30941267 tctcggactccacggcgccgctcaccatcgagacctcggtccccttcacctcccacatcg 30941208 Query: 194 tggacccgccgtcgcgcgaggtgaccaccacgccgcgggagctggcggccgccttccgcg 253 | |||||||| |||||||| || |||||||| ||| ||||| || |||||||| Sbjct: 30941207 tcgacccgccctcgcgcgacgtcaccaccaccccggccgagctcctcaccttcttccgcg 30941148 Query: 254 acatggcgctgatgcggcgggccgagatcgccgccgactcgctctacaaggcgaagctca 313 ||||| | ||||||| ||| ||||||||||| || || ||||| ||||| ||||||| Sbjct: 30941147 acatgtccgtgatgcgccggatggagatcgccgcggattccctctataaggccaagctca 30941088 Query: 314 tccggggcttctgccacctgtacgacggccaggaggcggtcgccgtgggcatggaggccg 373 |||| || ||||||||||| ||||||||||||||||| |||||||| || |||||||||| Sbjct: 30941087 tccgcgggttctgccacctctacgacggccaggaggccgtcgccgtcgggatggaggccg 30941028 Query: 374 ccatcacccgccgcgacgccatcatcaccgcctaccgcgaccactgcctctacctcgcgc 433 ||||||||||| ||| ||||||||||||| |||||||| |||||| ||||||||| | Sbjct: 30941027 ccatcacccgctccgattccatcatcaccgcgtaccgcgatcactgcacctacctcgcac 30940968 Query: 434 gcggcggggacctcgtggccgccttcgccgagctcat 470 ||||||| |||||||| |||| ||||| |||||||| Sbjct: 30940967 gcggcggcgacctcgtctccgcgttcgcggagctcat 30940931
>dbj|AP005112.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0684F11 Length = 147731 Score = 248 bits (125), Expect = 1e-62 Identities = 284/337 (84%) Strand = Plus / Minus Query: 134 tctccgactccacggagccgctcaccgtggagacctcgatccccttcacgtcccacatcg 193 |||| |||||||||| |||||||||| | ||||||||| |||||||||| |||||||||| Sbjct: 124844 tctcggactccacggcgccgctcaccatcgagacctcggtccccttcacctcccacatcg 124785 Query: 194 tggacccgccgtcgcgcgaggtgaccaccacgccgcgggagctggcggccgccttccgcg 253 | |||||||| |||||||| || |||||||| ||| ||||| || |||||||| Sbjct: 124784 tcgacccgccctcgcgcgacgtcaccaccaccccggccgagctcctcaccttcttccgcg 124725 Query: 254 acatggcgctgatgcggcgggccgagatcgccgccgactcgctctacaaggcgaagctca 313 ||||| | ||||||| ||| ||||||||||| || || ||||| ||||| ||||||| Sbjct: 124724 acatgtccgtgatgcgccggatggagatcgccgcggattccctctataaggccaagctca 124665 Query: 314 tccggggcttctgccacctgtacgacggccaggaggcggtcgccgtgggcatggaggccg 373 |||| || ||||||||||| ||||||||||||||||| |||||||| || |||||||||| Sbjct: 124664 tccgcgggttctgccacctctacgacggccaggaggccgtcgccgtcgggatggaggccg 124605 Query: 374 ccatcacccgccgcgacgccatcatcaccgcctaccgcgaccactgcctctacctcgcgc 433 ||||||||||| ||| ||||||||||||| |||||||| |||||| ||||||||| | Sbjct: 124604 ccatcacccgctccgattccatcatcaccgcgtaccgcgatcactgcacctacctcgcac 124545 Query: 434 gcggcggggacctcgtggccgccttcgccgagctcat 470 ||||||| |||||||| |||| ||||| |||||||| Sbjct: 124544 gcggcggcgacctcgtctccgcgttcgcggagctcat 124508
>dbj|AK098950.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013058M01, full insert sequence Length = 1547 Score = 248 bits (125), Expect = 1e-62 Identities = 284/337 (84%) Strand = Plus / Plus Query: 134 tctccgactccacggagccgctcaccgtggagacctcgatccccttcacgtcccacatcg 193 |||| |||||||||| |||||||||| | ||||||||| |||||||||| |||||||||| Sbjct: 171 tctcggactccacggcgccgctcaccatcgagacctcggtccccttcacctcccacatcg 230 Query: 194 tggacccgccgtcgcgcgaggtgaccaccacgccgcgggagctggcggccgccttccgcg 253 | |||||||| |||||||| || |||||||| ||| ||||| || |||||||| Sbjct: 231 tcgacccgccctcgcgcgacgtcaccaccaccccggccgagctcctcaccttcttccgcg 290 Query: 254 acatggcgctgatgcggcgggccgagatcgccgccgactcgctctacaaggcgaagctca 313 ||||| | ||||||| ||| ||||||||||| || || ||||| ||||| ||||||| Sbjct: 291 acatgtccgtgatgcgccggatggagatcgccgcggattccctctataaggccaagctca 350 Query: 314 tccggggcttctgccacctgtacgacggccaggaggcggtcgccgtgggcatggaggccg 373 |||| || ||||||||||| ||||||||||||||||| |||||||| || |||||||||| Sbjct: 351 tccgcgggttctgccacctctacgacggccaggaggccgtcgccgtcgggatggaggccg 410 Query: 374 ccatcacccgccgcgacgccatcatcaccgcctaccgcgaccactgcctctacctcgcgc 433 ||||||||||| ||| ||||||||||||| |||||||| |||||| ||||||||| | Sbjct: 411 ccatcacccgctccgattccatcatcaccgcgtaccgcgatcactgcacctacctcgcac 470 Query: 434 gcggcggggacctcgtggccgccttcgccgagctcat 470 ||||||| |||||||| |||| ||||| |||||||| Sbjct: 471 gcggcggcgacctcgtctccgcgttcgcggagctcat 507
>dbj|AK062242.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-047-E10, full insert sequence Length = 1563 Score = 240 bits (121), Expect = 3e-60 Identities = 283/337 (83%) Strand = Plus / Plus Query: 134 tctccgactccacggagccgctcaccgtggagacctcgatccccttcacgtcccacatcg 193 |||| |||||||||| |||||||||| | ||||||||| |||||||||| |||||||||| Sbjct: 167 tctcggactccacggcgccgctcaccatcgagacctcggtccccttcacctcccacatcg 226 Query: 194 tggacccgccgtcgcgcgaggtgaccaccacgccgcgggagctggcggccgccttccgcg 253 | |||||||| |||||||| || |||||||| ||| ||||| || |||||||| Sbjct: 227 tcgacccgccctcgcgcgacgtcaccaccaccccggccgagctcctcaccttcttccgcg 286 Query: 254 acatggcgctgatgcggcgggccgagatcgccgccgactcgctctacaaggcgaagctca 313 ||||| | ||||||| ||| ||||||||||| || || ||||| ||||| ||||||| Sbjct: 287 acatgtccgtgatgcgccggatggagatcgccgcggattccctctataaggccaagctca 346 Query: 314 tccggggcttctgccacctgtacgacggccaggaggcggtcgccgtgggcatggaggccg 373 |||| || ||||||||||| ||||||||||||||||| |||||||| || |||||||||| Sbjct: 347 tccgcgggttctgccacctctacgacggccaggaggccgtcgccgtcgggatggaggccg 406 Query: 374 ccatcacccgccgcgacgccatcatcaccgcctaccgcgaccactgcctctacctcgcgc 433 ||||||||||| ||| ||||||||||||| |||||||| |||||| | ||||||| | Sbjct: 407 ccatcacccgctccgattccatcatcaccgcgtaccgcgatcactgcacccacctcgcac 466 Query: 434 gcggcggggacctcgtggccgccttcgccgagctcat 470 ||||||| |||||||| |||| ||||| |||||||| Sbjct: 467 gcggcggcgacctcgtctccgcgttcgcggagctcat 503
>gb|AY103588.1| Zea mays PCO114222 mRNA sequence Length = 1686 Score = 214 bits (108), Expect = 2e-52 Identities = 279/336 (83%) Strand = Plus / Plus Query: 132 ggtctccgactccacggagccgctcaccgtggagacctcgatccccttcacgtcccacat 191 ||||||||| ||||||| | |||||||| | ||||| || |||| ||||| |||||| | Sbjct: 164 ggtctccgattccacggcggcgctcaccatcgagacatctgtccctttcacctcccacct 223 Query: 192 cgtggacccgccgtcgcgcgaggtgaccaccacgccgcgggagctggcggccgccttccg 251 ||| |||||||| |||||||| || |||||||| || ||||| | || |||||| Sbjct: 224 cgtcgacccgccctcgcgcgatgtcaccaccacccccgccgagctcgtcaccttcttccg 283 Query: 252 cgacatggcgctgatgcggcgggccgagatcgccgccgactcgctctacaaggcgaagct 311 ||||||| | || ||||| || ||||||||||||||||| |||||||| || ||||| Sbjct: 284 cgacatgtccctcatgcgccgcatggagatcgccgccgactccctctacaaagccaagct 343 Query: 312 catccggggcttctgccacctgtacgacggccaggaggcggtcgccgtgggcatggaggc 371 ||||| || ||||||||||| ||||||||||||||||| |||||||| ||||||||||| Sbjct: 344 tatccgcgggttctgccacctctacgacggccaggaggccgtcgccgtcggcatggaggc 403 Query: 372 cgccatcacccgccgcgacgccatcatcaccgcctaccgcgaccactgcctctacctcgc 431 ||||||||||||| ||| |||||||||||||||||||||||||||| ||||||||| Sbjct: 404 cgccatcacccgctccgattccatcatcaccgcctaccgcgaccactgtacctacctcgc 463 Query: 432 gcgcggcggggacctcgtggccgccttcgccgagct 467 || || || |||||||| |||||||| ||||||| Sbjct: 464 ccgaggaggtgacctcgtctccgccttctccgagct 499
>gb|BT016542.1| Zea mays clone Contig375 mRNA sequence Length = 1564 Score = 204 bits (103), Expect = 2e-49 Identities = 169/191 (88%) Strand = Plus / Plus Query: 277 gagatcgccgccgactcgctctacaaggcgaagctcatccggggcttctgccacctgtac 336 |||||||| |||||||| |||||||| || ||||| ||||| || ||||||||||| ||| Sbjct: 181 gagatcgcggccgactccctctacaaagccaagcttatccgtgggttctgccacctctac 240 Query: 337 gacggccaggaggcggtcgccgtgggcatggaggccgccatcacccgccgcgacgccatc 396 |||||||||||||| |||||||| |||||||||||||||||||||||| ||| ||||| Sbjct: 241 gacggccaggaggccgtcgccgtcggcatggaggccgccatcacccgctccgattccatc 300 Query: 397 atcaccgcctaccgcgaccactgcctctacctcgcgcgcggcggggacctcgtggccgcc 456 ||||||||||||||||||||||| ||||||||| ||||| ||||||||||| ||||| Sbjct: 301 atcaccgcctaccgcgaccactgtacctacctcgcccgcggaggggacctcgtctccgcc 360 Query: 457 ttcgccgagct 467 ||| ||||||| Sbjct: 361 ttctccgagct 371
>gb|AY112001.1| Zea mays CL1582_1 mRNA sequence Length = 1529 Score = 204 bits (103), Expect = 2e-49 Identities = 169/191 (88%) Strand = Plus / Plus Query: 277 gagatcgccgccgactcgctctacaaggcgaagctcatccggggcttctgccacctgtac 336 |||||||| |||||||| |||||||| || ||||| ||||| || ||||||||||| ||| Sbjct: 226 gagatcgcggccgactccctctacaaagccaagcttatccgtgggttctgccacctctac 285 Query: 337 gacggccaggaggcggtcgccgtgggcatggaggccgccatcacccgccgcgacgccatc 396 |||||||||||||| |||||||| |||||||||||||||||||||||| ||| ||||| Sbjct: 286 gacggccaggaggccgtcgccgtcggcatggaggccgccatcacccgctccgattccatc 345 Query: 397 atcaccgcctaccgcgaccactgcctctacctcgcgcgcggcggggacctcgtggccgcc 456 ||||||||||||||||||||||| ||||||||| ||||| ||||||||||| ||||| Sbjct: 346 atcaccgcctaccgcgaccactgtacctacctcgcccgcggaggggacctcgtctccgcc 405 Query: 457 ttcgccgagct 467 ||| ||||||| Sbjct: 406 ttctccgagct 416 Score = 44.1 bits (22), Expect = 0.41 Identities = 73/90 (81%) Strand = Plus / Plus Query: 134 tctccgactccacggagccgctcaccgtggagacctcgatccccttcacgtcccacatcg 193 ||||||||||||||| |||||||| | ||||| || |||| ||||| |||||| ||| Sbjct: 83 tctccgactccacggcagcgctcaccatcgagacatctgtccctttcacctcccacctcg 142 Query: 194 tggacccgccgtcgcgcgaggtgaccacca 223 | ||||| || ||||| || || ||||||| Sbjct: 143 tcgacccaccctcgcgtgatgtcaccacca 172
>gb|AF069911.1|AF069911 Zea mays pyruvate dehydrogenase E1 alpha subunit RNA, nuclear gene encoding mitochondrial protein, complete cds Length = 1747 Score = 204 bits (103), Expect = 2e-49 Identities = 169/191 (88%) Strand = Plus / Plus Query: 277 gagatcgccgccgactcgctctacaaggcgaagctcatccggggcttctgccacctgtac 336 |||||||| |||||||| |||||||| || ||||| ||||| || ||||||||||| ||| Sbjct: 362 gagatcgcggccgactccctctacaaagccaagcttatccgtgggttctgccacctctac 421 Query: 337 gacggccaggaggcggtcgccgtgggcatggaggccgccatcacccgccgcgacgccatc 396 |||||||||||||| |||||||| |||||||||||||||||||||||| ||| ||||| Sbjct: 422 gacggccaggaggccgtcgccgtcggcatggaggccgccatcacccgctccgattccatc 481 Query: 397 atcaccgcctaccgcgaccactgcctctacctcgcgcgcggcggggacctcgtggccgcc 456 ||||||||||||||||||||||| ||||||||| ||||| ||||||||||| ||||| Sbjct: 482 atcaccgcctaccgcgaccactgtacctacctcgcccgcggaggggacctcgtctccgcc 541 Query: 457 ttcgccgagct 467 ||| ||||||| Sbjct: 542 ttctccgagct 552
>gb|AC182706.2| Populus trichocarpa clone Pop1-79P19, complete sequence Length = 102226 Score = 85.7 bits (43), Expect = 1e-13 Identities = 82/95 (86%) Strand = Plus / Plus Query: 277 gagatcgccgccgactcgctctacaaggcgaagctcatccggggcttctgccacctgtac 336 ||||||||||||||||| || |||||||| ||||||||||| || ||||||||||| ||| Sbjct: 72348 gagatcgccgccgactctctatacaaggccaagctcatccgcggattctgccacctctac 72407 Query: 337 gacggccaggaggcggtcgccgtgggcatggaggc 371 ||||| || || || || ||||| || |||||||| Sbjct: 72408 gacggtcaagaagccgtggccgttggtatggaggc 72442
>gb|AY905543.1| Petunia x hybrida E1 alpha subunit of pyruvate dehydrogenase (E1aPDH) mRNA, complete cds Length = 1510 Score = 81.8 bits (41), Expect = 2e-12 Identities = 77/89 (86%) Strand = Plus / Plus Query: 253 gacatggcgctgatgcggcgggccgagatcgccgccgactcgctctacaaggcgaagctc 312 ||||||||| |||||||||| || ||||||||||| || |||||||| ||||| ||| Sbjct: 247 gacatggcggagatgcggcggatggaaatcgccgccgattcactctacaaagcgaaactc 306 Query: 313 atccggggcttctgccacctgtacgacgg 341 ||||| || |||||||||||||||||||| Sbjct: 307 atccgtggattctgccacctgtacgacgg 335
>dbj|AP006631.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT12F12, TM0028b, complete sequence Length = 34228 Score = 77.8 bits (39), Expect = 3e-11 Identities = 81/95 (85%) Strand = Plus / Minus Query: 277 gagatcgccgccgactcgctctacaaggcgaagctcatccggggcttctgccacctgtac 336 |||||||| || || || ||||||||||| || |||||||| || ||||||||||| ||| Sbjct: 14763 gagatcgcggctgattccctctacaaggccaaactcatccgcggattctgccacctctac 14704 Query: 337 gacggccaggaggcggtcgccgtgggcatggaggc 371 ||||| |||||||| |||||| | || |||||||| Sbjct: 14703 gacgggcaggaggccgtcgccatcggtatggaggc 14669
>gb|DQ083549.1| Citrus x paradisi pyruvate dehydrogenase mRNA, partial cds Length = 1483 Score = 73.8 bits (37), Expect = 5e-10 Identities = 82/97 (84%) Strand = Plus / Plus Query: 277 gagatcgccgccgactcgctctacaaggcgaagctcatccggggcttctgccacctgtac 336 |||||||| ||||| || ||||||||||| || ||| |||| || ||||||||||||||| Sbjct: 237 gagatcgctgccgattctctctacaaggcaaaactcgtccgcggattctgccacctgtac 296 Query: 337 gacggccaggaggcggtcgccgtgggcatggaggccg 373 ||||| || || ||||| ||| | |||||||| |||| Sbjct: 297 gacggacaagaagcggtggccatcggcatggaagccg 333
>ref|XM_961534.1| PREDICTED: Tribolium castaneum similar to CG7010-PC, isoform C (LOC655038), mRNA Length = 1155 Score = 63.9 bits (32), Expect = 4e-07 Identities = 35/36 (97%) Strand = Plus / Plus Query: 312 catccggggcttctgccacctgtacgacggccagga 347 |||||||||||||||||||||||||| ||||||||| Sbjct: 228 catccggggcttctgccacctgtacgccggccagga 263
>emb|CR962134.2| Medicago truncatula chromosome 5 clone mte1-40n1, COMPLETE SEQUENCE Length = 139651 Score = 54.0 bits (27), Expect = 4e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 310 ctcatccggggcttctgccacctgtacgacggccaggaggcggtcgccgtgggcatgga 368 |||||||| || |||||||| || |||||||||||||| || ||||| || |||||||| Sbjct: 26619 ctcatccgtggtttctgccatctttacgacggccaggaagccgtcgcagtcggcatgga 26677
>gb|AF299324.1|AF299324 Azorhizobium caulinodans pyruvate dehydrogenase alpha subunit (pdhA) and pyruvate dehydrogenase beta subunit (pdhB) genes, complete cds; and dihydrolipoamide S-acetyltransferase (pdhC) gene, partial cds Length = 3134 Score = 50.1 bits (25), Expect = 0.007 Identities = 49/57 (85%) Strand = Plus / Plus Query: 310 ctcatccggggcttctgccacctgtacgacggccaggaggcggtcgccgtgggcatg 366 |||||| | |||||||||||||| ||| ||||||||| ||||||| ||| |||||| Sbjct: 327 ctcatcggcggcttctgccacctctacatcggccaggaagcggtcgtcgtcggcatg 383
>gb|AF173665.1|AF173665 Beta vulgaris clone PDA109UNI pyruvate dehydrogenase, subunit A (PdhA) gene, partial sequence Length = 817 Score = 50.1 bits (25), Expect = 0.007 Identities = 46/53 (86%) Strand = Plus / Plus Query: 277 gagatcgccgccgactcgctctacaaggcgaagctcatccggggcttctgcca 329 ||||||||| |||| || ||||||||||| || |||||||| || |||||||| Sbjct: 13 gagatcgcctccgattctctctacaaggctaaactcatccgaggtttctgcca 65
>dbj|AB090279.1| Beta vulgaris PDH E1a-1 mRNA for pyruvate dehydrogenase E1alpha subunit, complete cds Length = 1535 Score = 50.1 bits (25), Expect = 0.007 Identities = 46/53 (86%) Strand = Plus / Plus Query: 277 gagatcgccgccgactcgctctacaaggcgaagctcatccggggcttctgcca 329 ||||||||| |||| || ||||||||||| || |||||||| || |||||||| Sbjct: 353 gagatcgcctccgattctctctacaaggctaaactcatccgaggtttctgcca 405
>ref|XM_754908.1| Ustilago maydis 521 hypothetical protein (UM03854.1) partial mRNA Length = 1236 Score = 48.1 bits (24), Expect = 0.026 Identities = 57/68 (83%) Strand = Plus / Plus Query: 306 gaagctcatccggggcttctgccacctgtacgacggccaggaggcggtcgccgtgggcat 365 |||||||||||| ||||| |||||| || | ||| ||||| || ||||| |||||||| Sbjct: 315 gaagctcatccgaggcttttgccacttggccatcggtcaggaagccgtcgctgtgggcat 374 Query: 366 ggaggccg 373 |||||||| Sbjct: 375 ggaggccg 382
>gb|AE017346.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 6, complete sequence Length = 1438950 Score = 46.1 bits (23), Expect = 0.10 Identities = 62/75 (82%) Strand = Plus / Plus Query: 307 aagctcatccggggcttctgccacctgtacgacggccaggaggcggtcgccgtgggcatg 366 ||||| ||||| |||||||||||||| | ||||||||| || || |||| |||||| Sbjct: 1292080 aagcttatccgaggcttctgccaccttgccatcggccaggaagccgtttccgtcggcatg 1292139 Query: 367 gaggccgccatcacc 381 ||| ||||||||||| Sbjct: 1292140 gagaccgccatcacc 1292154
>ref|XM_571697.1| Cryptococcus neoformans var. neoformans JEC21 pyruvate dehydrogenase e1 component alpha subunit, mitochondrial precursor (CNF04450) partial mRNA Length = 1427 Score = 46.1 bits (23), Expect = 0.10 Identities = 62/75 (82%) Strand = Plus / Plus Query: 307 aagctcatccggggcttctgccacctgtacgacggccaggaggcggtcgccgtgggcatg 366 ||||| ||||| |||||||||||||| | ||||||||| || || |||| |||||| Sbjct: 358 aagcttatccgaggcttctgccaccttgccatcggccaggaagccgtttccgtcggcatg 417 Query: 367 gaggccgccatcacc 381 ||| ||||||||||| Sbjct: 418 gagaccgccatcacc 432
>gb|AY448015.1|AY448010S6 Ipomoea trifida haplotype S1 self-incompatibility (S-) locus, contig SR6 Length = 39512 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Minus Query: 65 tcctccgccgcctcagcccggcggcc 90 |||||||||||| ||||||||||||| Sbjct: 22870 tcctccgccgccacagcccggcggcc 22845
>emb|BX042887.1|CNS09597 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC15AE06 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 872 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 246 cttccgcgacatggcgctgatg 267 |||||||||||||||||||||| Sbjct: 700 cttccgcgacatggcgctgatg 679
>emb|BX042886.1|CNS09596 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC15AE06 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 943 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 246 cttccgcgacatggcgctgatg 267 |||||||||||||||||||||| Sbjct: 423 cttccgcgacatggcgctgatg 444
>emb|BX041581.1|CNS0948X Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC13AC10 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 717 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 246 cttccgcgacatggcgctgatg 267 |||||||||||||||||||||| Sbjct: 402 cttccgcgacatggcgctgatg 423
>gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome Length = 2932766 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 398 tcaccgcctaccgcgaccactgcctc 423 |||||||| ||||||||||||||||| Sbjct: 1917488 tcaccgcccaccgcgaccactgcctc 1917513
>gb|AC009244.25| Homo sapiens chromosome 7 clone RP11-305M3, complete sequence Length = 190162 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 346 gaggcggtcgccgtgggcatgg 367 |||||||||||||||||||||| Sbjct: 170038 gaggcggtcgccgtgggcatgg 170059
>ref|XM_320843.2| Anopheles gambiae str. PEST ENSANGP00000017877 (ENSANGG00000015388), partial mRNA Length = 907 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 246 cttccgcgacatggcgctgatg 267 |||||||||||||||||||||| Sbjct: 219 cttccgcgacatggcgctgatg 240
>ref|NM_104682.2| Arabidopsis thaliana AT-E1 ALPHA; oxidoreductase, acting on the aldehyde or oxo group of donors, disulfide as acceptor / pyruvate dehydrogenase (ace> AT1G59900 (AT-E1 ALPHA) mRNA, complete cds Length = 1468 Score = 42.1 bits (21), Expect = 1.6 Identities = 54/65 (83%) Strand = Plus / Plus Query: 280 atcgccgccgactcgctctacaaggcgaagctcatccggggcttctgccacctgtacgac 339 ||||| ||||| ||||| ||||| |||||||| ||||| || || || || || |||||| Sbjct: 293 atcgcagccgattcgctttacaaagcgaagctaatccgagggttttgtcatctctacgac 352 Query: 340 ggcca 344 ||||| Sbjct: 353 ggcca 357
>gb|AC108759.2| Oryza sativa (Japonica cultiva-group) chromosome 9 BAC clone OSJNBa0072P02, complete sequence Length = 157488 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 69 ccgccgcctcagcccggcggccgcc 93 |||||||||| |||||||||||||| Sbjct: 18911 ccgccgcctcggcccggcggccgcc 18935
>gb|AC108753.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone OSJNBa0010B06, complete sequence Length = 129310 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 69 ccgccgcctcagcccggcggccgcc 93 |||||||||| |||||||||||||| Sbjct: 82901 ccgccgcctcggcccggcggccgcc 82925
>gb|AF289076.4| Homo sapiens chromosome 8 clone CTD-2372o24 map q21.3, complete sequence Length = 101256 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 109 cggctcctgccgctggtccgc 129 ||||||||||||||||||||| Sbjct: 93942 cggctcctgccgctggtccgc 93962
>gb|AC007258.3| Arabidopsis thaliana chromosome I BAC F23H11 genomic sequence, complete sequence Length = 144422 Score = 42.1 bits (21), Expect = 1.6 Identities = 54/65 (83%) Strand = Plus / Plus Query: 280 atcgccgccgactcgctctacaaggcgaagctcatccggggcttctgccacctgtacgac 339 ||||| ||||| ||||| ||||| |||||||| ||||| || || || || || |||||| Sbjct: 117431 atcgcagccgattcgctttacaaagcgaagctaatccgagggttttgtcatctctacgac 117490 Query: 340 ggcca 344 ||||| Sbjct: 117491 ggcca 117495
>gb|BT000974.1| Arabidopsis thaliana clone C104676 putative pyruvate dehydrogenase e1 alpha subunit (At1g59900) mRNA, complete cds Length = 1201 Score = 42.1 bits (21), Expect = 1.6 Identities = 54/65 (83%) Strand = Plus / Plus Query: 280 atcgccgccgactcgctctacaaggcgaagctcatccggggcttctgccacctgtacgac 339 ||||| ||||| ||||| ||||| |||||||| ||||| || || || || || |||||| Sbjct: 220 atcgcagccgattcgctttacaaagcgaagctaatccgagggttttgtcatctctacgac 279 Query: 340 ggcca 344 ||||| Sbjct: 280 ggcca 284
>gb|CP000284.1| Methylobacillus flagellatus KT, complete genome Length = 2971517 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 385 cgcgacgccatcatcaccgcc 405 ||||||||||||||||||||| Sbjct: 504895 cgcgacgccatcatcaccgcc 504875
>gb|AF360306.1| Arabidopsis thaliana putative pyruvate dehydrogenase e1 alpha subunit (At1g59900) mRNA, complete cds Length = 1467 Score = 42.1 bits (21), Expect = 1.6 Identities = 54/65 (83%) Strand = Plus / Plus Query: 280 atcgccgccgactcgctctacaaggcgaagctcatccggggcttctgccacctgtacgac 339 ||||| ||||| ||||| ||||| |||||||| ||||| || || || || || |||||| Sbjct: 293 atcgcagccgattcgctttacaaagcgaagctaatccgagggttttgtcatctctacgac 352 Query: 340 ggcca 344 ||||| Sbjct: 353 ggcca 357
>gb|AC087439.6| Homo sapiens chromosome 8, clone GS1-251I9, complete sequence Length = 150235 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 109 cggctcctgccgctggtccgc 129 ||||||||||||||||||||| Sbjct: 124389 cggctcctgccgctggtccgc 124369
>ref|XM_942901.1| PREDICTED: Homo sapiens hypothetical protein LOC647594 (LOC647594), mRNA Length = 1419 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 109 cggctcctgccgctggtccgc 129 ||||||||||||||||||||| Sbjct: 48 cggctcctgccgctggtccgc 28
>ref|XM_931047.1| PREDICTED: Homo sapiens hypothetical protein LOC642730 (LOC642730), mRNA Length = 1419 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 109 cggctcctgccgctggtccgc 129 ||||||||||||||||||||| Sbjct: 48 cggctcctgccgctggtccgc 28
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 69 ccgccgcctcagcccggcggccgcc 93 |||||||||| |||||||||||||| Sbjct: 19299685 ccgccgcctcggcccggcggccgcc 19299709
>gb|AY087667.1| Arabidopsis thaliana clone 37506 mRNA, complete sequence Length = 1455 Score = 42.1 bits (21), Expect = 1.6 Identities = 54/65 (83%) Strand = Plus / Plus Query: 280 atcgccgccgactcgctctacaaggcgaagctcatccggggcttctgccacctgtacgac 339 ||||| ||||| ||||| ||||| |||||||| ||||| || || || || || |||||| Sbjct: 280 atcgcagccgattcgctttacaaagcgaagctaatccgagggttttgtcatctctacgac 339 Query: 340 ggcca 344 ||||| Sbjct: 340 ggcca 344
>gb|AF078924.1| Plasmid pM3 aminoglycoside phosphotransferase (aph), putative Rep, putative Res, putative ParC, partition gene repressor, putative ParB, putative ParA, putative TrbC, and putative TrbD genes, complete cds; putative TrbE gene, partial cds; and unknown gene Length = 9766 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 286 gccgactcgctctacaaggc 305 |||||||||||||||||||| Sbjct: 9294 gccgactcgctctacaaggc 9313
>ref|XM_422451.1| PREDICTED: Gallus gallus paired-type homeobox Atx (LOC395271), mRNA Length = 2280 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 162 ggagacctcgatccccttca 181 |||||||||||||||||||| Sbjct: 560 ggagacctcgatccccttca 579
>gb|AC091806.4| Homo sapiens chromosome X clone RP11-320G24 map p11.4, complete sequence Length = 182440 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 80 gcccggcggccgcccagcgc 99 |||||||||||||||||||| Sbjct: 36106 gcccggcggccgcccagcgc 36125
>gb|AC091809.4| Homo sapiens chromosome X clone XXbac-11940 map p11.4, complete sequence Length = 218733 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 80 gcccggcggccgcccagcgc 99 |||||||||||||||||||| Sbjct: 105031 gcccggcggccgcccagcgc 105050
>gb|CP000359.1| Deinococcus geothermalis DSM 11300, complete genome Length = 2467205 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 390 cgccatcatcaccgcctaccgcgaccac 417 |||||||| | ||||||||||||||||| Sbjct: 1493067 cgccatcaccgccgcctaccgcgaccac 1493094
>emb|AL591785.1|SME591785 Sinorhizobium meliloti 1021 complete chromosome; segment 4/12 Length = 286550 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 47 acgccatggccgcggcgatc 66 |||||||||||||||||||| Sbjct: 99974 acgccatggccgcggcgatc 99993
>gb|AC024475.15| Homo sapiens chromosome 11, clone RP11-702F3, complete sequence Length = 191960 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 66 cctccgccgcctcagcccgg 85 |||||||||||||||||||| Sbjct: 113514 cctccgccgcctcagcccgg 113495
>ref|XM_545823.2| PREDICTED: Canis familiaris similar to mKIAA1790 protein (LOC488706), mRNA Length = 8364 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 99 cgcgccccctcggctcctgc 118 |||||||||||||||||||| Sbjct: 471 cgcgccccctcggctcctgc 452
>gb|CP000088.1| Thermobifida fusca YX, complete genome Length = 3642249 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 47 acgccatggccgcggcgatc 66 |||||||||||||||||||| Sbjct: 1398766 acgccatggccgcggcgatc 1398785
>gb|U82965.2|STU82965 Streptomcyes toyocaensis strain NRRL 15009 biosynthetic gene cluster A47934, complete sequence Length = 69301 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 270 gcgggccgagatcgccgccg 289 |||||||||||||||||||| Sbjct: 51410 gcgggccgagatcgccgccg 51391
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 272 gggccgagatcgccgccgac 291 |||||||||||||||||||| Sbjct: 4899345 gggccgagatcgccgccgac 4899326
>gb|AF436070.1| Thermus thermophilus strain HB27 ATP binding motif-containing protein PilF (pilF) and PilT (pilT) genes, complete cds Length = 2800 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 354 cgccgtgggcatggaggccgccatcacc 381 |||||||| || |||||||||||||||| Sbjct: 402 cgccgtggccacggaggccgccatcacc 429
>emb|BX932647.1| Gallus gallus finished cDNA, clone ChEST494n9 Length = 862 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 213 ggtgaccaccacgccgcgggagct 236 ||||| |||||||||||||||||| Sbjct: 32 ggtgagcaccacgccgcgggagct 9
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 260 cgctgatgcggcgggccgag 279 |||||||||||||||||||| Sbjct: 4990297 cgctgatgcggcgggccgag 4990278 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 233 agctggcggccgccttccgc 252 |||||||||||||||||||| Sbjct: 4201467 agctggcggccgccttccgc 4201448
>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome Length = 1849742 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 354 cgccgtgggcatggaggccgccatcacc 381 |||||||| || |||||||||||||||| Sbjct: 343347 cgccgtggccacggaggccgccatcacc 343374
>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome Length = 3147090 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 387 cgacgccatcatcaccgcct 406 |||||||||||||||||||| Sbjct: 617666 cgacgccatcatcaccgcct 617685
>ref|XM_558744.1| Anopheles gambiae str. PEST ENSANGP00000028064 (ENSANGG00000023372), partial mRNA Length = 582 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 239 cggccgccttccgcgacatg 258 |||||||||||||||||||| Sbjct: 466 cggccgccttccgcgacatg 447
>ref|XM_312930.2| Anopheles gambiae str. PEST ENSANGP00000014021 (ENSANGG00000011532), partial mRNA Length = 4194 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 239 cggccgccttccgcgacatg 258 |||||||||||||||||||| Sbjct: 796 cggccgccttccgcgacatg 777
>ref|NM_145096.2| Rattus norvegicus zinc finger, DHHC domain containing 2 (Zdhhc2), mRNA Length = 1735 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 ccgccgcctcagcccggcgg 88 |||||||||||||||||||| Sbjct: 4 ccgccgcctcagcccggcgg 23
>gb|AY886521.1| Rattus norvegicus membrane-associated DHHC2 zinc finger protein mRNA, complete cds Length = 1735 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 ccgccgcctcagcccggcgg 88 |||||||||||||||||||| Sbjct: 4 ccgccgcctcagcccggcgg 23
>emb|AJ629123.1| Streptomyces sp. DSM 40477 genomic region of the apramycin biosynthesis cluster Length = 41623 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 346 gaggcggtcgccgtgggcatggag 369 |||||||||||||| ||||||||| Sbjct: 36111 gaggcggtcgccgtcggcatggag 36134
>gb|AE017221.1| Thermus thermophilus HB27, complete genome Length = 1894877 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 354 cgccgtgggcatggaggccgccatcacc 381 |||||||| || |||||||||||||||| Sbjct: 1543151 cgccgtggccacggaggccgccatcacc 1543124
>emb|AL691462.12| Mouse DNA sequence from clone RP23-267F7 on chromosome 2, complete sequence Length = 61310 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 66 cctccgccgcctcagcccgg 85 |||||||||||||||||||| Sbjct: 24899 cctccgccgcctcagcccgg 24880 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,979,174 Number of Sequences: 3902068 Number of extensions: 2979174 Number of successful extensions: 69201 Number of sequences better than 10.0: 70 Number of HSP's better than 10.0 without gapping: 67 Number of HSP's successfully gapped in prelim test: 3 Number of HSP's that attempted gapping in prelim test: 67753 Number of HSP's gapped (non-prelim): 1444 length of query: 470 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 448 effective length of database: 17,147,199,772 effective search space: 7681945497856 effective search space used: 7681945497856 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)