ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast79d08 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY904340.1| Hordeum vulgare subsp. vulgare 2-alkenal reductase (ALH) gene, complete cds Length = 1864 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Plus Query: 204 tggtcaagaacctctacctctcctgcgacccctacatgcgc 244 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 140 tggtcaagaacctctacctctcctgcgacccctacatgcgc 180
>ref|XM_473036.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1038 Score = 69.9 bits (35), Expect = 7e-09 Identities = 50/55 (90%) Strand = Plus / Plus Query: 359 gccggcgacctcgtgtggggcatgaccggctgggaggactacagcgtcatcaagg 413 |||||||||||||||||||| ||||| || |||||||| |||||| ||||||||| Sbjct: 286 gccggcgacctcgtgtggggaatgacgggatgggaggagtacagcctcatcaagg 340 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 209 aagaacctctacctctcctgcgacccctacatgcgc 244 |||||||| ||||| ||||||||||||||||||||| Sbjct: 139 aagaacctgtacctgtcctgcgacccctacatgcgc 174 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 459 tgccgctgtcctactacaccggcgtcctcggcatg 493 ||||||| ||||||||||||||| ||||||||||| Sbjct: 380 tgccgctctcctactacaccggcctcctcggcatg 414
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 69.9 bits (35), Expect = 7e-09 Identities = 50/55 (90%) Strand = Plus / Minus Query: 359 gccggcgacctcgtgtggggcatgaccggctgggaggactacagcgtcatcaagg 413 |||||||||||||||||||| ||||| || |||||||| |||||| ||||||||| Sbjct: 24834370 gccggcgacctcgtgtggggaatgacgggatgggaggagtacagcctcatcaagg 24834316 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Minus Query: 209 aagaacctctacctctcctgcgacccctacatgcgc 244 |||||||| ||||| ||||||||||||||||||||| Sbjct: 24834649 aagaacctgtacctgtcctgcgacccctacatgcgc 24834614 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Minus Query: 459 tgccgctgtcctactacaccggcgtcctcgg 489 ||||||| ||||||||||||||| ||||||| Sbjct: 24834276 tgccgctctcctactacaccggcctcctcgg 24834246
>dbj|AK109382.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-210-F02, full insert sequence Length = 1343 Score = 69.9 bits (35), Expect = 7e-09 Identities = 50/55 (90%) Strand = Plus / Plus Query: 359 gccggcgacctcgtgtggggcatgaccggctgggaggactacagcgtcatcaagg 413 |||||||||||||||||||| ||||| || |||||||| |||||| ||||||||| Sbjct: 394 gccggcgacctcgtgtggggaatgacgggatgggaggagtacagcctcatcaagg 448 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 209 aagaacctctacctctcctgcgacccctacatgcgc 244 |||||||| ||||| ||||||||||||||||||||| Sbjct: 247 aagaacctgtacctgtcctgcgacccctacatgcgc 282 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 459 tgccgctgtcctactacaccggcgtcctcggcatg 493 ||||||| ||||||||||||||| ||||||||||| Sbjct: 488 tgccgctctcctactacaccggcctcctcggcatg 522
>dbj|AK069136.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023008C06, full insert sequence Length = 1269 Score = 69.9 bits (35), Expect = 7e-09 Identities = 50/55 (90%) Strand = Plus / Plus Query: 359 gccggcgacctcgtgtggggcatgaccggctgggaggactacagcgtcatcaagg 413 |||||||||||||||||||| ||||| || |||||||| |||||| ||||||||| Sbjct: 332 gccggcgacctcgtgtggggaatgacgggatgggaggagtacagcctcatcaagg 386 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 209 aagaacctctacctctcctgcgacccctacatgcgc 244 |||||||| ||||| ||||||||||||||||||||| Sbjct: 185 aagaacctgtacctgtcctgcgacccctacatgcgc 220 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 459 tgccgctgtcctactacaccggcgtcctcggcatg 493 ||||||| ||||||||||||||| ||||||||||| Sbjct: 426 tgccgctctcctactacaccggcctcctcggcatg 460
>emb|AL606627.3|OSJN00052 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0067K08, complete sequence Length = 170765 Score = 69.9 bits (35), Expect = 7e-09 Identities = 50/55 (90%) Strand = Plus / Minus Query: 359 gccggcgacctcgtgtggggcatgaccggctgggaggactacagcgtcatcaagg 413 |||||||||||||||||||| ||||| || |||||||| |||||| ||||||||| Sbjct: 96086 gccggcgacctcgtgtggggaatgacgggatgggaggagtacagcctcatcaagg 96032 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Minus Query: 209 aagaacctctacctctcctgcgacccctacatgcgc 244 |||||||| ||||| ||||||||||||||||||||| Sbjct: 96365 aagaacctgtacctgtcctgcgacccctacatgcgc 96330 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Minus Query: 459 tgccgctgtcctactacaccggcgtcctcgg 489 ||||||| ||||||||||||||| ||||||| Sbjct: 95992 tgccgctctcctactacaccggcctcctcgg 95962
>ref|NM_190224.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1080 Score = 63.9 bits (32), Expect = 5e-07 Identities = 35/36 (97%) Strand = Plus / Plus Query: 209 aagaacctctacctctcctgcgacccctacatgcgc 244 ||||| |||||||||||||||||||||||||||||| Sbjct: 166 aagaatctctacctctcctgcgacccctacatgcgc 201
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 63.9 bits (32), Expect = 5e-07 Identities = 35/36 (97%) Strand = Plus / Plus Query: 209 aagaacctctacctctcctgcgacccctacatgcgc 244 ||||| |||||||||||||||||||||||||||||| Sbjct: 38746105 aagaatctctacctctcctgcgacccctacatgcgc 38746140
>dbj|AP003407.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1078G07 Length = 199457 Score = 63.9 bits (32), Expect = 5e-07 Identities = 35/36 (97%) Strand = Plus / Plus Query: 209 aagaacctctacctctcctgcgacccctacatgcgc 244 ||||| |||||||||||||||||||||||||||||| Sbjct: 18987 aagaatctctacctctcctgcgacccctacatgcgc 19022
>dbj|AK099151.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023064D04, full insert sequence Length = 1166 Score = 63.9 bits (32), Expect = 5e-07 Identities = 35/36 (97%) Strand = Plus / Plus Query: 209 aagaacctctacctctcctgcgacccctacatgcgc 244 ||||| |||||||||||||||||||||||||||||| Sbjct: 199 aagaatctctacctctcctgcgacccctacatgcgc 234
>dbj|AK063674.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-119-D10, full insert sequence Length = 1232 Score = 63.9 bits (32), Expect = 5e-07 Identities = 35/36 (97%) Strand = Plus / Plus Query: 209 aagaacctctacctctcctgcgacccctacatgcgc 244 ||||| |||||||||||||||||||||||||||||| Sbjct: 232 aagaatctctacctctcctgcgacccctacatgcgc 267
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Plus Query: 198 cggtgctggtcaagaacctctacctctcctgcgacccctacatgcg 243 ||||| ||||||||||||| || |||| ||||||||||||||||| Sbjct: 6931808 cggtggtggtcaagaacctgtatatctcatgcgacccctacatgcg 6931853 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 70 gcggcggcgatcgatggcgg 89 |||||||||||||||||||| Sbjct: 6910312 gcggcggcgatcgatggcgg 6910331
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Plus Query: 198 cggtgctggtcaagaacctctacctctcctgcgacccctacatgcg 243 ||||| ||||||||||||| || |||| ||||||||||||||||| Sbjct: 6931687 cggtggtggtcaagaacctgtatatctcatgcgacccctacatgcg 6931732 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 70 gcggcggcgatcgatggcgg 89 |||||||||||||||||||| Sbjct: 6910191 gcggcggcgatcgatggcgg 6910210
>emb|AL731740.4|CNS08C7P Oryza sativa chromosome 12, . BAC OSJNBb0001P19 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 144563 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Minus Query: 198 cggtgctggtcaagaacctctacctctcctgcgacccctacatgcg 243 ||||| ||||||||||||| || |||| ||||||||||||||||| Sbjct: 30230 cggtggtggtcaagaacctgtatatctcatgcgacccctacatgcg 30185 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 70 gcggcggcgatcgatggcgg 89 |||||||||||||||||||| Sbjct: 51726 gcggcggcgatcgatggcgg 51707
>gb|CP000150.1| Burkholderia sp. 383 chromosome 3, complete sequence Length = 1395069 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Plus Query: 280 cgccgccttcgtcccgggcgcc 301 |||||||||||||||||||||| Sbjct: 1281821 cgccgccttcgtcccgggcgcc 1281842
>ref|NM_184568.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 933 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Plus Query: 347 cccggggtcgccgccggcgacc 368 |||||||||||||||||||||| Sbjct: 280 cccggggtcgccgccggcgacc 301
>emb|BX640444.1| Bordetella bronchiseptica strain RB50, complete genome; segment 8/16 Length = 349008 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Plus Query: 175 cgtcgacgaggccgaggacggc 196 |||||||||||||||||||||| Sbjct: 278176 cgtcgacgaggccgaggacggc 278197
>emb|BX640427.1| Bordetella parapertussis strain 12822, complete genome; segment 5/14 Length = 348997 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Plus Query: 175 cgtcgacgaggccgaggacggc 196 |||||||||||||||||||||| Sbjct: 190518 cgtcgacgaggccgaggacggc 190539
>emb|BX640414.1| Bordetella pertussis strain Tohama I, complete genome; segment 4/12 Length = 343243 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Plus Query: 175 cgtcgacgaggccgaggacggc 196 |||||||||||||||||||||| Sbjct: 32246 cgtcgacgaggccgaggacggc 32267
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Plus Query: 472 ctacaccggcgtcctcggcatg 493 |||||||||||||||||||||| Sbjct: 2384965 ctacaccggcgtcctcggcatg 2384986 Score = 44.1 bits (22), Expect = 0.43 Identities = 25/26 (96%) Strand = Plus / Minus Query: 296 ggcgcccccatcaccggctacggcgt 321 |||||| ||||||||||||||||||| Sbjct: 14386 ggcgcctccatcaccggctacggcgt 14361 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 339 cctcgacgcccggggtcgccgccgg 363 ||||||||||||||| ||||||||| Sbjct: 3845831 cctcgacgcccgggggcgccgccgg 3845807
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Plus Query: 175 cgtcgacgaggccgaggacggc 196 |||||||||||||||||||||| Sbjct: 3745290 cgtcgacgaggccgaggacggc 3745311 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 176 gtcgacgaggccgaggacggc 196 ||||||||||||||||||||| Sbjct: 910586 gtcgacgaggccgaggacggc 910606
>emb|CR555308.1| Azoarcus sp. EbN1 plasmid 2 Length = 223670 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 278 accgccgccttcgtcccgggcgccc 302 ||||||||| ||||||||||||||| Sbjct: 192630 accgccgccgtcgtcccgggcgccc 192654
>emb|AL939129.1|SCO939129 Streptomyces coelicolor A3(2) complete genome; segment 26/29 Length = 292200 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 347 cccggggtcgccgccggcgacctcg 371 ||||||||||||||| ||||||||| Sbjct: 15223 cccggggtcgccgcccgcgacctcg 15247
>emb|AL939127.1|SCO939127 Streptomyces coelicolor A3(2) complete genome; segment 24/29 Length = 290850 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 188 gaggacggctcggtgctggtc 208 ||||||||||||||||||||| Sbjct: 7395 gaggacggctcggtgctggtc 7415
>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome Length = 3304561 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 445 gcccgacgacggcgtgccgct 465 ||||||||||||||||||||| Sbjct: 3188424 gcccgacgacggcgtgccgct 3188444
>emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid complete sequence Length = 2094509 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 175 cgtcgacgaggccgaggacgg 195 ||||||||||||||||||||| Sbjct: 1765456 cgtcgacgaggccgaggacgg 1765436
>ref|XM_465723.1| Oryza sativa (japonica cultivar-group), mRNA Length = 741 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 345 cgcccggggtcgccgccggcgacc 368 |||||| ||||||||||||||||| Sbjct: 439 cgcccgaggtcgccgccggcgacc 462
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 202 gctggtcaagaacctctacc 221 |||||||||||||||||||| Sbjct: 2729378 gctggtcaagaacctctacc 2729359
>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence Length = 3806533 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 ggcggcggcgatcgatggcg 88 |||||||||||||||||||| Sbjct: 2253407 ggcggcggcgatcgatggcg 2253388
>emb|X60350.1|MTGROEOP M.tuberculosis groE gene for KCS and 10-kDa products Length = 2987 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 190 ggacggctcggtgctggtcaagaa 213 ||||||||||||| |||||||||| Sbjct: 2130 ggacggctcggtggtggtcaagaa 2153
>emb|BX950851.1| Erwinia carotovora subsp. atroseptica SCRI1043, complete genome Length = 5064019 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 73 gcggcgatcgatggcggagc 92 |||||||||||||||||||| Sbjct: 970235 gcggcgatcgatggcggagc 970216
>emb|AL939124.1|SCO939124 Streptomyces coelicolor A3(2) complete genome; segment 21/29 Length = 308050 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 278 accgccgccttcgtcccgggcgcc 301 |||||||||||||||| ||||||| Sbjct: 496 accgccgccttcgtcctgggcgcc 519
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 354 tcgccgccggcgacctcgtg 373 |||||||||||||||||||| Sbjct: 2841620 tcgccgccggcgacctcgtg 2841639
>gb|AE017340.1| Idiomarina loihiensis L2TR, complete genome Length = 2839318 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 375 ggggcatgaccggctgggag 394 |||||||||||||||||||| Sbjct: 2545743 ggggcatgaccggctgggag 2545724
>gb|AY661558.1| Hordeum vulgare subsp. vulgare eIF4E gene locus, complete sequence Length = 439641 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 354 tcgccgccggcgacctcgtg 373 |||||||||||||||||||| Sbjct: 334996 tcgccgccggcgacctcgtg 335015 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 354 tcgccgccggcgacctcgtg 373 |||||||||||||||||||| Sbjct: 245481 tcgccgccggcgacctcgtg 245500 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 354 tcgccgccggcgacctcgtg 373 |||||||||||||||||||| Sbjct: 225140 tcgccgccggcgacctcgtg 225159
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 345 cgcccggggtcgccgccggcgacc 368 |||||| ||||||||||||||||| Sbjct: 17033195 cgcccgaggtcgccgccggcgacc 17033172
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 307 caccggctacggcgtgtccg 326 |||||||||||||||||||| Sbjct: 1603307 caccggctacggcgtgtccg 1603326
>dbj|AP004837.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0483C08 Length = 143855 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 345 cgcccggggtcgccgccggcgacc 368 |||||| ||||||||||||||||| Sbjct: 14568 cgcccgaggtcgccgccggcgacc 14545
>dbj|AP005322.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0677G01 Length = 137031 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 345 cgcccggggtcgccgccggcgacc 368 |||||| ||||||||||||||||| Sbjct: 84451 cgcccgaggtcgccgccggcgacc 84428
>gb|AE005081.1| Halobacterium sp. NRC-1 section 112 of 170 of the complete genome Length = 19293 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 352 ggtcgccgccggcgacctcg 371 |||||||||||||||||||| Sbjct: 10370 ggtcgccgccggcgacctcg 10389
>dbj|AK111178.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-177-F06, full insert sequence Length = 2778 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 165 cggcggcgcccgtcgacgaggccg 188 ||||| |||||||||||||||||| Sbjct: 2406 cggcgtcgcccgtcgacgaggccg 2429
>dbj|AK070393.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023050P07, full insert sequence Length = 1247 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 70 gcggcggcgatcgatggcgg 89 |||||||||||||||||||| Sbjct: 17 gcggcggcgatcgatggcgg 36
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 109 ggtcctcaaggactacgtgg 128 |||||||||||||||||||| Sbjct: 2696948 ggtcctcaaggactacgtgg 2696929
>gb|AC152181.1| Mus musculus BAC clone RP24-321P19 from 15, complete sequence Length = 187733 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 145 ggcgcacatggagctgctcc 164 |||||||||||||||||||| Sbjct: 139561 ggcgcacatggagctgctcc 139542
>gb|L43074.1|STMFABD Streptomyces glaucescens fabD, fabH, fabC, fabB, and ORF5 genes, complete cds Length = 4558 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 348 ccggggtcgccgccggcgacctcg 371 ||||||||||||||| |||||||| Sbjct: 1774 ccggggtcgccgccgccgacctcg 1797 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,073,824 Number of Sequences: 3902068 Number of extensions: 3073824 Number of successful extensions: 65904 Number of sequences better than 10.0: 45 Number of HSP's better than 10.0 without gapping: 45 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 63799 Number of HSP's gapped (non-prelim): 2105 length of query: 493 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 471 effective length of database: 17,147,199,772 effective search space: 8076331092612 effective search space used: 8076331092612 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
