Clone Information

BLAST Search Result

Clone Name	bast79d07
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	RS20_GLUOX (Q5FN16) 30S ribosomal protein S20	40	0.003
2	RS20_THEMA (Q9X1Y7) 30S ribosomal protein S20	35	0.081
3	RS20_SHISS (Q3Z5Y7) 30S ribosomal protein S20	34	0.14
4	RS20_SHIDS (Q32K74) 30S ribosomal protein S20	34	0.14
5	RS20_SHIBS (Q326K0) 30S ribosomal protein S20	34	0.14
6	RS20_SALTY (P0A2B1) 30S ribosomal protein S20	34	0.14
7	RS20_SALTI (P0A2B2) 30S ribosomal protein S20	34	0.14
8	RS20_SALPA (Q5PDM2) 30S ribosomal protein S20	34	0.14
9	RS20_SALCH (Q57TL8) 30S ribosomal protein S20	34	0.14
10	RS20_ECOLI (P0A7U7) 30S ribosomal protein S20	34	0.14
11	RS20_ECOL6 (P0A7U8) 30S ribosomal protein S20	34	0.14
12	RS20_ECO57 (P0A7U9) 30S ribosomal protein S20	34	0.14
13	RS20_COXBU (Q83ED6) 30S ribosomal protein S20	34	0.14
14	RS20_THEFY (Q47RQ2) 30S ribosomal protein S20	34	0.18
15	RS20_VIBPA (Q87S93) 30S ribosomal protein S20	33	0.24
16	RS20_PROMA (Q7VA27) 30S ribosomal protein S20	33	0.31
17	RS20_IDILO (Q5QZS3) 30S ribosomal protein S20	33	0.31
18	PTTG_PONPY (Q5NVI6) Pituitary tumor-transforming gene 1 protein-...	33	0.31
19	PTTG_HUMAN (P53801) Pituitary tumor-transforming gene 1 protein-...	33	0.31
20	RS20_PSEHT (Q3IEA5) 30S ribosomal protein S20	33	0.40
21	RS20_PHOPR (Q6LUL5) 30S ribosomal protein S20	33	0.40
22	RS20_COLP3 (Q486U3) 30S ribosomal protein S20	33	0.40
23	RS20_SYNPX (Q7U8K6) 30S ribosomal protein S20	32	0.52
24	RS20_METCA (Q605N0) 30S ribosomal protein S20	32	0.52
25	RS20_THIDA (Q3SHS6) 30S ribosomal protein S20	32	0.68
26	RS20_PHOLL (Q7N8X4) 30S ribosomal protein S20	32	0.68
27	RS20_FRATT (Q5NEF7) 30S ribosomal protein S20	32	0.68
28	DHX8_HUMAN (Q14562) ATP-dependent RNA helicase DHX8 (EC 3.6.1.-)...	32	0.68
29	RS20_MANSM (Q65RP7) 30S ribosomal protein S20	32	0.89
30	RS20_YERPS (Q66ES6) 30S ribosomal protein S20	31	1.2
31	RS20_YERPE (Q8ZIM3) 30S ribosomal protein S20	31	1.2
32	RS20_VIBVY (Q7MNN1) 30S ribosomal protein S20	31	1.2
33	RS20_VIBVU (Q8DES4) 30S ribosomal protein S20	31	1.2
34	RS20_VIBCH (O34239) 30S ribosomal protein S20	31	1.2
35	RS20_SHEON (Q8EBH9) 30S ribosomal protein S20	31	1.2
36	RS20_PASMU (Q9CKG0) 30S ribosomal protein S20	31	1.2
37	RS20_MYCTU (P66505) 30S ribosomal protein S20	31	1.2
38	RS20_MYCBO (P66506) 30S ribosomal protein S20	31	1.2
39	RS20_HAEDU (Q7VKC6) 30S ribosomal protein S20	31	1.2
40	RS20_FUSNN (Q8RHW1) 30S ribosomal protein S20	31	1.2
41	RS20_DESPS (Q6AMS8) 30S ribosomal protein S20	31	1.2
42	CPLX2_RAT (P84087) Complexin-2 (Synaphin-1)	31	1.2
43	CPLX2_MOUSE (P84086) Complexin-2 (Synaphin-1) (921-L)	31	1.2
44	CPLX2_HUMAN (Q6PUV4) Complexin-2 (Synaphin-1)	31	1.2
45	CPLX2_BOVIN (P84088) Complexin-2 (Synaphin-1)	31	1.2
46	CAC1I_HUMAN (Q9P0X4) Voltage-dependent T-type calcium channel al...	31	1.2
47	CAC1I_RAT (Q9Z0Y8) Voltage-dependent T-type calcium channel alph...	31	1.2
48	CAC1H_RAT (Q9EQ60) Voltage-dependent T-type calcium channel alph...	31	1.2
49	RS20_PROMM (Q7TUR7) 30S ribosomal protein S20	31	1.5
50	RS20_NITOC (Q3J6R8) 30S ribosomal protein S20	31	1.5
51	RS20_KLEPN (P45601) 30S ribosomal protein S20 (Fragment)	31	1.5
52	RS20_ERWCT (Q6D0C1) 30S ribosomal protein S20	31	1.5
53	RS20_PROMI (P42275) 30S ribosomal protein S20 (Fragment)	30	2.0
54	RS20_HAEIN (P44959) 30S ribosomal protein S20	30	2.0
55	RS20_HAEI8 (Q4QLU2) 30S ribosomal protein S20	30	2.0
56	VPHE_NPVAC (P24728) Polyhedral envelope protein (PE) (Polyhedral...	30	2.0
57	DDX46_BRARE (Q4TVV3) Probable ATP-dependent RNA helicase DDX46 (...	30	2.0
58	RS20_XYLFT (P66513) 30S ribosomal protein S20	30	2.6
59	RS20_XYLFA (P66512) 30S ribosomal protein S20	30	2.6
60	RS20_NEIMB (P66508) 30S ribosomal protein S20	30	2.6
61	RS20_NEIMA (P66507) 30S ribosomal protein S20	30	2.6
62	RS20_NEIG1 (Q5F6Q6) 30S ribosomal protein S20	30	2.6
63	RS20_MYCLE (O33132) 30S ribosomal protein S20	30	2.6
64	RS20_BORBU (P49394) 30S ribosomal protein S20	30	2.6
65	T2_MOUSE (Q06666) Octapeptide-repeat protein T2	30	2.6
66	RS20_XANOR (Q5H2E4) 30S ribosomal protein S20	30	3.4
67	RS20_XANCP (Q8PBG9) 30S ribosomal protein S20	30	3.4
68	RS20_XANC8 (Q4US37) 30S ribosomal protein S20	30	3.4
69	RS20_XANC5 (Q3BW45) 30S ribosomal protein S20	30	3.4
70	RS20_XANAC (Q8PN22) 30S ribosomal protein S20	30	3.4
71	CAC1G_RAT (O54898) Voltage-dependent T-type calcium channel alph...	30	3.4
72	PTTG_RAT (Q6P767) Pituitary tumor-transforming gene 1 protein-in...	30	3.4
73	RS20_DECAR (Q47BL6) 30S ribosomal protein S20	29	4.4
74	RS20_BORGA (Q662D1) 30S ribosomal protein S20	29	4.4
75	INCE_MOUSE (Q9WU62) Inner centromere protein	29	4.4
76	CPLX2_NARJA (O42105) Complexin-2 (NJ-synaphin-1A)	29	4.4
77	PTTG_MOUSE (Q8R143) Pituitary tumor-transforming gene 1 protein-...	29	4.4
78	ADA2C_RAT (P22086) Alpha-2C adrenergic receptor (Alpha-2C adreno...	29	4.4
79	ADA2C_MOUSE (Q01337) Alpha-2C adrenergic receptor (Alpha-2C adre...	29	4.4
80	RS20_ZYMMO (Q9Z5V0) 30S ribosomal protein S20	29	5.8
81	NOTC2_RAT (Q9QW30) Neurogenic locus notch homolog protein 2 prec...	29	5.8
82	NOTC2_MOUSE (O35516) Neurogenic locus notch homolog protein 2 pr...	29	5.8
83	RS20_PROMT (Q46J20) 30S ribosomal protein S20	28	7.6
84	RR20_GUITH (O78486) Chloroplast 30S ribosomal protein S20	28	7.6
85	UBP10_YEAST (P53874) Ubiquitin carboxyl-terminal hydrolase 10 (E...	28	7.6
86	RSRC1_MOUSE (Q9DBU6) Arginine/serine-rich coiled coil protein 1	28	7.6
87	NOTC3_MOUSE (Q61982) Neurogenic locus notch homolog protein 3 pr...	28	9.9
88	DLL3_MOUSE (O88516) Delta-like protein 3 precursor (Drosophila D...	28	9.9
89	SLIT1_MOUSE (Q80TR4) Slit homolog 1 protein precursor (Slit-1)	28	9.9
90	CHCH3_HUMAN (Q9NX63) Coiled-coil-helix-coiled-coil-helix domain-...	28	9.9
91	CCDC3_HUMAN (Q9BQI4) Coiled-coil domain-containing protein 3 pre...	28	9.9
92	CD2L1_HUMAN (P21127) PITSLRE serine/threonine-protein kinase CDC...	28	9.9
93	YMT4_YEAST (Q04213) Hypothetical 55.4 kDa protein in MCM1-NUP116...	28	9.9
94	DLL3_RAT (O88671) Delta-like protein 3 precursor (Drosophila Del...	28	9.9
95	DEI_DROME (P41894) Helix-loop-helix protein delilah	28	9.9
96	RS20_AQUAE (O67643) 30S ribosomal protein S20	28	9.9
97	NOTC2_HUMAN (Q04721) Neurogenic locus notch homolog protein 2 pr...	28	9.9
98	BHLH8_MOUSE (Q9QYC3) Class B basic helix-loop-helix protein 8 (b...	28	9.9
99	PDCD7_HUMAN (Q8N8D1) Programmed cell death protein 7 (ES18) (HES18)	28	9.9
100	DDX46_RAT (Q62780) Probable ATP-dependent RNA helicase DDX46 (EC...	28	9.9
101	DDX46_PONPY (Q5R6D8) Probable ATP-dependent RNA helicase DDX46 (...	28	9.9
102	DDX46_HUMAN (Q7L014) Probable ATP-dependent RNA helicase DDX46 (...	28	9.9
103	CD2L2_HUMAN (Q9UQ88) PITSLRE serine/threonine-protein kinase CDC...	28	9.9
104	CAC1H_HUMAN (O95180) Voltage-dependent T-type calcium channel al...	28	9.9
105	CAC1H_MOUSE (O88427) Voltage-dependent T-type calcium channel al...	28	9.9

>RS20_GLUOX (Q5FN16) 30S ribosomal protein S20|
          Length = 89

 Score = 39.7 bits (91), Expect = 0.003
 Identities = 22/44 (50%), Positives = 29/44 (65%)
 Frame = +1

Query: 295 SVKKRERQNDRHRIRNHARKAEMRTRMKKVFRALEKLRKKADAQ 426
           S +KR RQN+R R RN AR + MRT +KKV  A++   K A A+
Sbjct: 6   SARKRIRQNERRRERNVARMSRMRTFIKKVELAIQAGDKSAAAE 49

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>RS20_THEMA (Q9X1Y7) 30S ribosomal protein S20|
          Length = 96

 Score = 35.0 bits (79), Expect = 0.081
 Identities = 16/40 (40%), Positives = 25/40 (62%)
 Frame = +1

Query: 295 SVKKRERQNDRHRIRNHARKAEMRTRMKKVFRALEKLRKK 414
           S KKR R +++ R+RN A K   + R+K+V +A+E    K
Sbjct: 6   SAKKRVRVSEKRRLRNKAYKTFFKNRIKEVLKAIENKEPK 45

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>RS20_SHISS (Q3Z5Y7) 30S ribosomal protein S20|
          Length = 87

 Score = 34.3 bits (77), Expect = 0.14
 Identities = 18/41 (43%), Positives = 27/41 (65%)
 Frame = +1

Query: 295 SVKKRERQNDRHRIRNHARKAEMRTRMKKVFRALEKLRKKA 417
           S KKR  Q+++ R  N +R++ MRT +KKV+ A+E   K A
Sbjct: 6   SAKKRAIQSEKARKHNASRRSMMRTFIKKVYAAIEAGDKAA 46

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>RS20_SHIDS (Q32K74) 30S ribosomal protein S20|
          Length = 87

 Score = 34.3 bits (77), Expect = 0.14
 Identities = 18/41 (43%), Positives = 27/41 (65%)
 Frame = +1

Query: 295 SVKKRERQNDRHRIRNHARKAEMRTRMKKVFRALEKLRKKA 417
           S KKR  Q+++ R  N +R++ MRT +KKV+ A+E   K A
Sbjct: 6   SAKKRAIQSEKARKHNASRRSMMRTFIKKVYAAIEAGDKAA 46

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>RS20_SHIBS (Q326K0) 30S ribosomal protein S20|
          Length = 87

 Score = 34.3 bits (77), Expect = 0.14
 Identities = 18/41 (43%), Positives = 27/41 (65%)
 Frame = +1

Query: 295 SVKKRERQNDRHRIRNHARKAEMRTRMKKVFRALEKLRKKA 417
           S KKR  Q+++ R  N +R++ MRT +KKV+ A+E   K A
Sbjct: 6   SAKKRAIQSEKARKHNASRRSMMRTFIKKVYAAIEAGDKAA 46

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>RS20_SALTY (P0A2B1) 30S ribosomal protein S20|
          Length = 86

 Score = 34.3 bits (77), Expect = 0.14
 Identities = 18/41 (43%), Positives = 27/41 (65%)
 Frame = +1

Query: 295 SVKKRERQNDRHRIRNHARKAEMRTRMKKVFRALEKLRKKA 417
           S KKR  Q+++ R  N +R++ MRT +KKV+ A+E   K A
Sbjct: 5   SAKKRAVQSEKARKHNASRRSMMRTFIKKVYAAIEAGDKAA 45

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>RS20_SALTI (P0A2B2) 30S ribosomal protein S20|
          Length = 86

 Score = 34.3 bits (77), Expect = 0.14
 Identities = 18/41 (43%), Positives = 27/41 (65%)
 Frame = +1

Query: 295 SVKKRERQNDRHRIRNHARKAEMRTRMKKVFRALEKLRKKA 417
           S KKR  Q+++ R  N +R++ MRT +KKV+ A+E   K A
Sbjct: 5   SAKKRAVQSEKARKHNASRRSMMRTFIKKVYAAIEAGDKAA 45

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>RS20_SALPA (Q5PDM2) 30S ribosomal protein S20|
          Length = 87

 Score = 34.3 bits (77), Expect = 0.14
 Identities = 18/41 (43%), Positives = 27/41 (65%)
 Frame = +1

Query: 295 SVKKRERQNDRHRIRNHARKAEMRTRMKKVFRALEKLRKKA 417
           S KKR  Q+++ R  N +R++ MRT +KKV+ A+E   K A
Sbjct: 6   SAKKRAVQSEKARKHNASRRSMMRTFIKKVYAAIEAGDKAA 46

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>RS20_SALCH (Q57TL8) 30S ribosomal protein S20|
          Length = 87

 Score = 34.3 bits (77), Expect = 0.14
 Identities = 18/41 (43%), Positives = 27/41 (65%)
 Frame = +1

Query: 295 SVKKRERQNDRHRIRNHARKAEMRTRMKKVFRALEKLRKKA 417
           S KKR  Q+++ R  N +R++ MRT +KKV+ A+E   K A
Sbjct: 6   SAKKRAVQSEKARKHNASRRSMMRTFIKKVYAAIEAGDKAA 46

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>RS20_ECOLI (P0A7U7) 30S ribosomal protein S20|
          Length = 86

 Score = 34.3 bits (77), Expect = 0.14
 Identities = 18/41 (43%), Positives = 27/41 (65%)
 Frame = +1

Query: 295 SVKKRERQNDRHRIRNHARKAEMRTRMKKVFRALEKLRKKA 417
           S KKR  Q+++ R  N +R++ MRT +KKV+ A+E   K A
Sbjct: 5   SAKKRAIQSEKARKHNASRRSMMRTFIKKVYAAIEAGDKAA 45

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>RS20_ECOL6 (P0A7U8) 30S ribosomal protein S20|
          Length = 86

 Score = 34.3 bits (77), Expect = 0.14
 Identities = 18/41 (43%), Positives = 27/41 (65%)
 Frame = +1

Query: 295 SVKKRERQNDRHRIRNHARKAEMRTRMKKVFRALEKLRKKA 417
           S KKR  Q+++ R  N +R++ MRT +KKV+ A+E   K A
Sbjct: 5   SAKKRAIQSEKARKHNASRRSMMRTFIKKVYAAIEAGDKAA 45

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>RS20_ECO57 (P0A7U9) 30S ribosomal protein S20|
          Length = 86

 Score = 34.3 bits (77), Expect = 0.14
 Identities = 18/41 (43%), Positives = 27/41 (65%)
 Frame = +1

Query: 295 SVKKRERQNDRHRIRNHARKAEMRTRMKKVFRALEKLRKKA 417
           S KKR  Q+++ R  N +R++ MRT +KKV+ A+E   K A
Sbjct: 5   SAKKRAIQSEKARKHNASRRSMMRTFIKKVYAAIEAGDKAA 45

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>RS20_COXBU (Q83ED6) 30S ribosomal protein S20|
          Length = 90

 Score = 34.3 bits (77), Expect = 0.14
 Identities = 12/33 (36%), Positives = 25/33 (75%)
 Frame = +1

Query: 301 KKRERQNDRHRIRNHARKAEMRTRMKKVFRALE 399
           KKR RQN++  + N ++++ +RT +KK+ ++L+
Sbjct: 8   KKRARQNEKRELHNASQRSAVRTAVKKILKSLQ 40

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>RS20_THEFY (Q47RQ2) 30S ribosomal protein S20|
          Length = 92

 Score = 33.9 bits (76), Expect = 0.18
 Identities = 16/35 (45%), Positives = 24/35 (68%)
 Frame = +1

Query: 295 SVKKRERQNDRHRIRNHARKAEMRTRMKKVFRALE 399
           S KKR RQN++ R+RN A K+ ++T ++K   A E
Sbjct: 6   SQKKRIRQNEKARLRNKAVKSSLKTAIRKFREAAE 40

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>RS20_VIBPA (Q87S93) 30S ribosomal protein S20|
          Length = 86

 Score = 33.5 bits (75), Expect = 0.24
 Identities = 18/41 (43%), Positives = 25/41 (60%)
 Frame = +1

Query: 295 SVKKRERQNDRHRIRNHARKAEMRTRMKKVFRALEKLRKKA 417
           S KKR  Q ++ R  N +R++ MRT MKK   A+E   K+A
Sbjct: 6   SAKKRAIQAEKRRQHNASRRSMMRTYMKKTVAAIEAGDKEA 46

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>RS20_PROMA (Q7VA27) 30S ribosomal protein S20|
          Length = 99

 Score = 33.1 bits (74), Expect = 0.31
 Identities = 16/34 (47%), Positives = 23/34 (67%)
 Frame = +1

Query: 292 DSVKKRERQNDRHRIRNHARKAEMRTRMKKVFRA 393
           +S KKR +  +R+RI+N   K+ MRT MK+ F A
Sbjct: 5   NSAKKRIQIAERNRIQNRTYKSAMRTLMKRCFEA 38

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>RS20_IDILO (Q5QZS3) 30S ribosomal protein S20|
          Length = 86

 Score = 33.1 bits (74), Expect = 0.31
 Identities = 17/41 (41%), Positives = 27/41 (65%)
 Frame = +1

Query: 295 SVKKRERQNDRHRIRNHARKAEMRTRMKKVFRALEKLRKKA 417
           S KKR  Q +++R  N +R++ MRT +K+V  A+E   K+A
Sbjct: 6   SAKKRAIQAEKNRRHNASRRSMMRTYLKRVNAAIETKDKEA 46

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>PTTG_PONPY (Q5NVI6) Pituitary tumor-transforming gene 1 protein-interacting|
           protein precursor (Pituitary tumor-transforming gene
           protein-binding factor) (PTTG-binding factor) (PBF)
          Length = 180

 Score = 33.1 bits (74), Expect = 0.31
 Identities = 22/61 (36%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
 Frame = +1

Query: 256 CAAEPPKTGRQPD-SVKKRERQNDRHRIRNHARKAEMRTRMKKVFRALEKLRKKADAQPE 432
           C     K  R+PD S +K  R+ +  RIR   R+AEM+TR        +++RKK     E
Sbjct: 118 CCCCRRKRSRKPDRSEEKAMREREERRIRQEERRAEMKTRH-------DEIRKKYGLFKE 170

Query: 433 E 435
           E
Sbjct: 171 E 171

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>PTTG_HUMAN (P53801) Pituitary tumor-transforming gene 1 protein-interacting|
           protein precursor (Pituitary tumor-transforming gene
           protein-binding factor) (PTTG-binding factor) (PBF)
          Length = 180

 Score = 33.1 bits (74), Expect = 0.31
 Identities = 22/61 (36%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
 Frame = +1

Query: 256 CAAEPPKTGRQPD-SVKKRERQNDRHRIRNHARKAEMRTRMKKVFRALEKLRKKADAQPE 432
           C     K  R+PD S +K  R+ +  RIR   R+AEM+TR        +++RKK     E
Sbjct: 118 CCCCRRKRSRKPDRSEEKAMREREERRIRQEERRAEMKTRH-------DEIRKKYGLFKE 170

Query: 433 E 435
           E
Sbjct: 171 E 171

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>RS20_PSEHT (Q3IEA5) 30S ribosomal protein S20|
          Length = 86

 Score = 32.7 bits (73), Expect = 0.40
 Identities = 18/44 (40%), Positives = 27/44 (61%)
 Frame = +1

Query: 295 SVKKRERQNDRHRIRNHARKAEMRTRMKKVFRALEKLRKKADAQ 426
           S KKR   ++++R  N +R++ MRT  KKV  A+E   K+A  Q
Sbjct: 6   SAKKRAITSEKNRQHNASRRSMMRTYFKKVIVAIEAGDKEAAQQ 49

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>RS20_PHOPR (Q6LUL5) 30S ribosomal protein S20|
          Length = 86

 Score = 32.7 bits (73), Expect = 0.40
 Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 6/51 (11%)
 Frame = +1

Query: 295 SVKKRERQNDRHRIRNHARKAEMRTRMKKVFRALEKLRKK------ADAQP 429
           S KKR   +++ R  N +R++ MRT  KKV  A+E   K+      AD QP
Sbjct: 6   SAKKRAITSEKRRQHNASRRSMMRTFFKKVIAAIEAGEKENATKAFADMQP 56

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>RS20_COLP3 (Q486U3) 30S ribosomal protein S20|
          Length = 86

 Score = 32.7 bits (73), Expect = 0.40
 Identities = 15/33 (45%), Positives = 23/33 (69%)
 Frame = +1

Query: 301 KKRERQNDRHRIRNHARKAEMRTRMKKVFRALE 399
           KKR  Q+++ R  N +R++ MRT +KKV  A+E
Sbjct: 8   KKRAGQSEKRRQHNASRRSMMRTLVKKVLAAIE 40

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>RS20_SYNPX (Q7U8K6) 30S ribosomal protein S20|
          Length = 98

 Score = 32.3 bits (72), Expect = 0.52
 Identities = 16/40 (40%), Positives = 24/40 (60%)
 Frame = +1

Query: 295 SVKKRERQNDRHRIRNHARKAEMRTRMKKVFRALEKLRKK 414
           + KKR    +R+R+RN   K+ +RT MK+ F A E   K+
Sbjct: 6   AAKKRIEIAERNRLRNRTYKSALRTLMKRCFVACEAYSKE 45

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>RS20_METCA (Q605N0) 30S ribosomal protein S20|
          Length = 92

 Score = 32.3 bits (72), Expect = 0.52
 Identities = 15/35 (42%), Positives = 23/35 (65%)
 Frame = +1

Query: 295 SVKKRERQNDRHRIRNHARKAEMRTRMKKVFRALE 399
           S KKR RQ + +R  N A ++ +RT +KKV  A++
Sbjct: 6   SAKKRARQAENNRAHNAALRSRLRTYIKKVILAVD 40

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>RS20_THIDA (Q3SHS6) 30S ribosomal protein S20|
          Length = 87

 Score = 32.0 bits (71), Expect = 0.68
 Identities = 16/39 (41%), Positives = 25/39 (64%)
 Frame = +1

Query: 301 KKRERQNDRHRIRNHARKAEMRTRMKKVFRALEKLRKKA 417
           +KR RQ    R  N ++++E+RT +KKV +A+E   K A
Sbjct: 8   RKRARQASAQRDHNMSQRSELRTAIKKVRKAIEAGDKAA 46

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>RS20_PHOLL (Q7N8X4) 30S ribosomal protein S20|
          Length = 87

 Score = 32.0 bits (71), Expect = 0.68
 Identities = 16/41 (39%), Positives = 27/41 (65%)
 Frame = +1

Query: 295 SVKKRERQNDRHRIRNHARKAEMRTRMKKVFRALEKLRKKA 417
           S KKR  Q+++ R  N +R++ +RT +KKV+ A+    K+A
Sbjct: 6   SAKKRAIQSEKRRKHNASRRSMVRTFIKKVYAAIATGDKEA 46

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>RS20_FRATT (Q5NEF7) 30S ribosomal protein S20|
          Length = 90

 Score = 32.0 bits (71), Expect = 0.68
 Identities = 17/34 (50%), Positives = 23/34 (67%)
 Frame = +1

Query: 301 KKRERQNDRHRIRNHARKAEMRTRMKKVFRALEK 402
           KKR  Q +R+R  N AR++ MRT +KK   A+EK
Sbjct: 8   KKRIIQAERNRQHNVARRSMMRTFLKKTAYAIEK 41

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>DHX8_HUMAN (Q14562) ATP-dependent RNA helicase DHX8 (EC 3.6.1.-) (DEAH box|
           protein 8) (RNA helicase HRH1)
          Length = 1220

 Score = 32.0 bits (71), Expect = 0.68
 Identities = 16/67 (23%), Positives = 34/67 (50%)
 Frame = +1

Query: 214 ASTGRLRRRGLQVVCAAEPPKTGRQPDSVKKRERQNDRHRIRNHARKAEMRTRMKKVFRA 393
           ++ G+ ++R  +     +  K  R  D  + R+R  +R+R R+H R+   R+R +   R 
Sbjct: 155 SAAGQEKQRDAEHRDRTKKKKRSRSRDRNRDRDRDRERNRDRDHKRRHRSRSRSRSRTRE 214

Query: 394 LEKLRKK 414
             K++ +
Sbjct: 215 RNKVKSR 221



 Score = 28.1 bits (61), Expect = 9.9
 Identities = 13/48 (27%), Positives = 24/48 (50%)
 Frame = +1

Query: 283 RQPDSVKKRERQNDRHRIRNHARKAEMRTRMKKVFRALEKLRKKADAQ 426
           R  D  + RER  DR   R H  ++  R+R ++  +   + R ++ +Q
Sbjct: 182 RNRDRDRDRERNRDRDHKRRHRSRSRSRSRTRERNKVKSRYRSRSRSQ 229

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>RS20_MANSM (Q65RP7) 30S ribosomal protein S20|
          Length = 89

 Score = 31.6 bits (70), Expect = 0.89
 Identities = 16/41 (39%), Positives = 26/41 (63%)
 Frame = +1

Query: 295 SVKKRERQNDRHRIRNHARKAEMRTRMKKVFRALEKLRKKA 417
           S KKR  Q+++ R  N ++++ MRT +KKV+ A+    K A
Sbjct: 8   SAKKRAVQSEKSRQHNASQRSMMRTYIKKVYAAVAAGEKAA 48

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>RS20_YERPS (Q66ES6) 30S ribosomal protein S20|
          Length = 87

 Score = 31.2 bits (69), Expect = 1.2
 Identities = 14/34 (41%), Positives = 24/34 (70%)
 Frame = +1

Query: 295 SVKKRERQNDRHRIRNHARKAEMRTRMKKVFRAL 396
           S KKR  Q+++ R  N +R++ +RT +KKV+ A+
Sbjct: 6   SAKKRAVQSEKRRKHNASRRSMVRTFIKKVYAAI 39

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>RS20_YERPE (Q8ZIM3) 30S ribosomal protein S20|
          Length = 87

 Score = 31.2 bits (69), Expect = 1.2
 Identities = 14/34 (41%), Positives = 24/34 (70%)
 Frame = +1

Query: 295 SVKKRERQNDRHRIRNHARKAEMRTRMKKVFRAL 396
           S KKR  Q+++ R  N +R++ +RT +KKV+ A+
Sbjct: 6   SAKKRAVQSEKRRKHNASRRSMVRTFIKKVYAAI 39

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>RS20_VIBVY (Q7MNN1) 30S ribosomal protein S20|
          Length = 86

 Score = 31.2 bits (69), Expect = 1.2
 Identities = 17/41 (41%), Positives = 24/41 (58%)
 Frame = +1

Query: 295 SVKKRERQNDRHRIRNHARKAEMRTRMKKVFRALEKLRKKA 417
           S KKR  Q ++ R  N +R++ MRT MKK   A+    K+A
Sbjct: 6   SAKKRAIQAEKRRQHNASRRSMMRTYMKKTVAAIAAGDKEA 46

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>RS20_VIBVU (Q8DES4) 30S ribosomal protein S20|
          Length = 86

 Score = 31.2 bits (69), Expect = 1.2
 Identities = 17/41 (41%), Positives = 24/41 (58%)
 Frame = +1

Query: 295 SVKKRERQNDRHRIRNHARKAEMRTRMKKVFRALEKLRKKA 417
           S KKR  Q ++ R  N +R++ MRT MKK   A+    K+A
Sbjct: 6   SAKKRAIQAEKRRQHNASRRSMMRTYMKKTVAAIAAGDKEA 46

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>RS20_VIBCH (O34239) 30S ribosomal protein S20|
          Length = 86

 Score = 31.2 bits (69), Expect = 1.2
 Identities = 17/41 (41%), Positives = 24/41 (58%)
 Frame = +1

Query: 295 SVKKRERQNDRHRIRNHARKAEMRTRMKKVFRALEKLRKKA 417
           S KKR  Q ++ R  N +R++ MRT MKK   A+    K+A
Sbjct: 6   SAKKRAIQAEKRRQHNASRRSMMRTYMKKTVAAIAAGDKEA 46

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>RS20_SHEON (Q8EBH9) 30S ribosomal protein S20|
          Length = 88

 Score = 31.2 bits (69), Expect = 1.2
 Identities = 14/34 (41%), Positives = 23/34 (67%)
 Frame = +1

Query: 295 SVKKRERQNDRHRIRNHARKAEMRTRMKKVFRAL 396
           S KKR  Q+++ R  N +R++ +RT +KKV  A+
Sbjct: 6   SAKKRALQSEKRRQHNASRRSMLRTYVKKVIAAI 39

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>RS20_PASMU (Q9CKG0) 30S ribosomal protein S20|
          Length = 89

 Score = 31.2 bits (69), Expect = 1.2
 Identities = 14/34 (41%), Positives = 24/34 (70%)
 Frame = +1

Query: 295 SVKKRERQNDRHRIRNHARKAEMRTRMKKVFRAL 396
           S KKR  Q+++ R  N ++++ MRT +KKV+ A+
Sbjct: 8   SAKKRAIQSEKRRQHNASQRSMMRTYIKKVYAAV 41

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>RS20_MYCTU (P66505) 30S ribosomal protein S20|
          Length = 86

 Score = 31.2 bits (69), Expect = 1.2
 Identities = 18/43 (41%), Positives = 25/43 (58%)
 Frame = +1

Query: 295 SVKKRERQNDRHRIRNHARKAEMRTRMKKVFRALEKLRKKADA 423
           S +KR R N+R R+RN A K+ +RT + + FR       KA A
Sbjct: 6   SQQKRNRTNERARLRNKAVKSSLRTAV-RAFREAAHAGDKAKA 47

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>RS20_MYCBO (P66506) 30S ribosomal protein S20|
          Length = 86

 Score = 31.2 bits (69), Expect = 1.2
 Identities = 18/43 (41%), Positives = 25/43 (58%)
 Frame = +1

Query: 295 SVKKRERQNDRHRIRNHARKAEMRTRMKKVFRALEKLRKKADA 423
           S +KR R N+R R+RN A K+ +RT + + FR       KA A
Sbjct: 6   SQQKRNRTNERARLRNKAVKSSLRTAV-RAFREAAHAGDKAKA 47

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>RS20_HAEDU (Q7VKC6) 30S ribosomal protein S20|
          Length = 89

 Score = 31.2 bits (69), Expect = 1.2
 Identities = 14/34 (41%), Positives = 24/34 (70%)
 Frame = +1

Query: 295 SVKKRERQNDRHRIRNHARKAEMRTRMKKVFRAL 396
           S KKR  Q+++ R  N ++++ MRT +KKV+ A+
Sbjct: 8   SAKKRAVQSEKRRQHNASQRSMMRTFIKKVYAAI 41

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>RS20_FUSNN (Q8RHW1) 30S ribosomal protein S20|
          Length = 90

 Score = 31.2 bits (69), Expect = 1.2
 Identities = 15/35 (42%), Positives = 21/35 (60%)
 Frame = +1

Query: 295 SVKKRERQNDRHRIRNHARKAEMRTRMKKVFRALE 399
           S KKR    +R+R+RN A K  ++T  KKV   +E
Sbjct: 6   SAKKRILVAERNRVRNQAVKTRVKTMAKKVLSTIE 40

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>RS20_DESPS (Q6AMS8) 30S ribosomal protein S20|
          Length = 89

 Score = 31.2 bits (69), Expect = 1.2
 Identities = 14/35 (40%), Positives = 22/35 (62%)
 Frame = +1

Query: 295 SVKKRERQNDRHRIRNHARKAEMRTRMKKVFRALE 399
           S +KR RQN   R+RN + +  M+  ++K+  ALE
Sbjct: 6   SAEKRNRQNQVARLRNKSTRTAMKNSVRKLDEALE 40

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>CPLX2_RAT (P84087) Complexin-2 (Synaphin-1)|
          Length = 134

 Score = 31.2 bits (69), Expect = 1.2
 Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 6/57 (10%)
 Frame = +1

Query: 283 RQPDSVKKRE------RQNDRHRIRNHARKAEMRTRMKKVFRALEKLRKKADAQPEE 435
           + PD+ KK E      RQ +  R   HAR    R ++++  R    L+KK + + EE
Sbjct: 26  KDPDAQKKEEERQEALRQQEEERKAKHARMEAEREKVRQQIRDKYGLKKKEEKEAEE 82

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>CPLX2_MOUSE (P84086) Complexin-2 (Synaphin-1) (921-L)|
          Length = 134

 Score = 31.2 bits (69), Expect = 1.2
 Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 6/57 (10%)
 Frame = +1

Query: 283 RQPDSVKKRE------RQNDRHRIRNHARKAEMRTRMKKVFRALEKLRKKADAQPEE 435
           + PD+ KK E      RQ +  R   HAR    R ++++  R    L+KK + + EE
Sbjct: 26  KDPDAQKKEEERQEALRQQEEERKAKHARMEAEREKVRQQIRDKYGLKKKEEKEAEE 82

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>CPLX2_HUMAN (Q6PUV4) Complexin-2 (Synaphin-1)|
          Length = 134

 Score = 31.2 bits (69), Expect = 1.2
 Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 6/57 (10%)
 Frame = +1

Query: 283 RQPDSVKKRE------RQNDRHRIRNHARKAEMRTRMKKVFRALEKLRKKADAQPEE 435
           + PD+ KK E      RQ +  R   HAR    R ++++  R    L+KK + + EE
Sbjct: 26  KDPDAQKKEEERQEALRQQEEERKAKHARMEAEREKVRQQIRDKYGLKKKEEKEAEE 82

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>CPLX2_BOVIN (P84088) Complexin-2 (Synaphin-1)|
          Length = 134

 Score = 31.2 bits (69), Expect = 1.2
 Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 6/57 (10%)
 Frame = +1

Query: 283 RQPDSVKKRE------RQNDRHRIRNHARKAEMRTRMKKVFRALEKLRKKADAQPEE 435
           + PD+ KK E      RQ +  R   HAR    R ++++  R    L+KK + + EE
Sbjct: 26  KDPDAQKKEEERQEALRQQEEERKAKHARMEAEREKVRQQIRDKYGLKKKEEKEAEE 82

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>CAC1I_HUMAN (Q9P0X4) Voltage-dependent T-type calcium channel alpha-1I subunit|
            (Voltage-gated calcium channel alpha subunit Cav3.3)
            (Ca(v)3.3)
          Length = 2223

 Score = 31.2 bits (69), Expect = 1.2
 Identities = 15/34 (44%), Positives = 18/34 (52%)
 Frame = +1

Query: 328  HRIRNHARKAEMRTRMKKVFRALEKLRKKADAQP 429
            H+ R H    E R R +K  R LEK R+KA   P
Sbjct: 1435 HKCRQHQEAEEARRREEKRLRRLEKKRRKAQRLP 1468

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>CAC1I_RAT (Q9Z0Y8) Voltage-dependent T-type calcium channel alpha-1I subunit|
            (Voltage-gated calcium channel alpha subunit Cav3.3)
            (CaVT.3)
          Length = 2201

 Score = 31.2 bits (69), Expect = 1.2
 Identities = 15/34 (44%), Positives = 18/34 (52%)
 Frame = +1

Query: 328  HRIRNHARKAEMRTRMKKVFRALEKLRKKADAQP 429
            H+ R H    E R R +K  R LEK R+KA   P
Sbjct: 1394 HKCRQHQEAEEARRREEKRLRRLEKKRRKAQRLP 1427

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>CAC1H_RAT (Q9EQ60) Voltage-dependent T-type calcium channel alpha-1H subunit|
            (Voltage-gated calcium channel alpha subunit Cav3.2)
          Length = 2359

 Score = 31.2 bits (69), Expect = 1.2
 Identities = 14/34 (41%), Positives = 19/34 (55%)
 Frame = +1

Query: 328  HRIRNHARKAEMRTRMKKVFRALEKLRKKADAQP 429
            H+ R H    E R R +K  R LE+ R+KA  +P
Sbjct: 1570 HKCRQHQEAEEARRREEKRLRRLERRRRKAQRRP 1603



 Score = 29.6 bits (65), Expect = 3.4
 Identities = 14/42 (33%), Positives = 16/42 (38%)
 Frame = +2

Query: 164 ACRPPTPPSPSVGSEPXXXXXXXXXXXCRWCAPPSRPRLEDS 289
           AC PP+PPSP  G              C    P  R R+  S
Sbjct: 554 ACAPPSPPSPGHGPPDSESVHSIYHADCHVEGPQERARVAHS 595

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>RS20_PROMM (Q7TUR7) 30S ribosomal protein S20|
          Length = 100

 Score = 30.8 bits (68), Expect = 1.5
 Identities = 15/33 (45%), Positives = 22/33 (66%)
 Frame = +1

Query: 295 SVKKRERQNDRHRIRNHARKAEMRTRMKKVFRA 393
           S KKR +  +R+R+ N + K+ MRT MK+ F A
Sbjct: 6   SSKKRVQIAERNRLENKSYKSAMRTLMKRCFSA 38

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>RS20_NITOC (Q3J6R8) 30S ribosomal protein S20|
          Length = 87

 Score = 30.8 bits (68), Expect = 1.5
 Identities = 13/32 (40%), Positives = 22/32 (68%)
 Frame = +1

Query: 301 KKRERQNDRHRIRNHARKAEMRTRMKKVFRAL 396
           +KR RQ    R+RN  +++ MRT +KK+ +A+
Sbjct: 8   RKRARQAGVRRVRNAGQRSMMRTYVKKIVKAI 39

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>RS20_KLEPN (P45601) 30S ribosomal protein S20 (Fragment)|
          Length = 72

 Score = 30.8 bits (68), Expect = 1.5
 Identities = 16/38 (42%), Positives = 25/38 (65%)
 Frame = +1

Query: 304 KRERQNDRHRIRNHARKAEMRTRMKKVFRALEKLRKKA 417
           KR  Q+++ R  N +R++ MRT +KKV+ A+E   K A
Sbjct: 1   KRAVQSEKARKHNASRRSMMRTFIKKVYAAIEAGDKAA 38

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>RS20_ERWCT (Q6D0C1) 30S ribosomal protein S20|
          Length = 87

 Score = 30.8 bits (68), Expect = 1.5
 Identities = 19/51 (37%), Positives = 32/51 (62%), Gaps = 6/51 (11%)
 Frame = +1

Query: 295 SVKKRERQNDRHRIRNHARKAEMRTRMKKVFRAL----EKLRKKA--DAQP 429
           S KKR  Q+++ R  N + ++ MRT +KKV+ A+    +++ +KA  D QP
Sbjct: 6   SAKKRAVQSEKRRKHNASSRSMMRTFIKKVYAAIATGDKEVAQKAFNDMQP 56

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>RS20_PROMI (P42275) 30S ribosomal protein S20 (Fragment)|
          Length = 72

 Score = 30.4 bits (67), Expect = 2.0
 Identities = 15/38 (39%), Positives = 25/38 (65%)
 Frame = +1

Query: 304 KRERQNDRHRIRNHARKAEMRTRMKKVFRALEKLRKKA 417
           KR  Q+++ R  N +R++ MRT +KKV+ A+    K+A
Sbjct: 1   KRAVQSEKRRQHNASRRSMMRTYIKKVYAAVASGDKEA 38

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>RS20_HAEIN (P44959) 30S ribosomal protein S20|
          Length = 86

 Score = 30.4 bits (67), Expect = 2.0
 Identities = 15/41 (36%), Positives = 25/41 (60%)
 Frame = +1

Query: 295 SVKKRERQNDRHRIRNHARKAEMRTRMKKVFRALEKLRKKA 417
           S KKR  Q+++ R  N ++++ MRT +KKV+  +    K A
Sbjct: 5   SAKKRAVQSEKRRQHNASQRSMMRTYIKKVYAQVAAGEKSA 45

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>RS20_HAEI8 (Q4QLU2) 30S ribosomal protein S20|
          Length = 89

 Score = 30.4 bits (67), Expect = 2.0
 Identities = 15/41 (36%), Positives = 25/41 (60%)
 Frame = +1

Query: 295 SVKKRERQNDRHRIRNHARKAEMRTRMKKVFRALEKLRKKA 417
           S KKR  Q+++ R  N ++++ MRT +KKV+  +    K A
Sbjct: 8   SAKKRAVQSEKRRQHNASQRSMMRTYIKKVYAQVAAGEKSA 48

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>VPHE_NPVAC (P24728) Polyhedral envelope protein (PE) (Polyhedral calyx|
           protein)
          Length = 252

 Score = 30.4 bits (67), Expect = 2.0
 Identities = 14/38 (36%), Positives = 22/38 (57%)
 Frame = +1

Query: 307 RERQNDRHRIRNHARKAEMRTRMKKVFRALEKLRKKAD 420
           R R   R R R+ +R +  R   +++F ALEK+R + D
Sbjct: 127 RPRSRSRSRSRSRSRSSSPRRGRRQIFDALEKIRHQND 164

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>DDX46_BRARE (Q4TVV3) Probable ATP-dependent RNA helicase DDX46 (EC 3.6.1.-)|
           (DEAD box protein 46)
          Length = 1018

 Score = 30.4 bits (67), Expect = 2.0
 Identities = 15/45 (33%), Positives = 27/45 (60%)
 Frame = +1

Query: 283 RQPDSVKKRERQNDRHRIRNHARKAEMRTRMKKVFRALEKLRKKA 417
           R PDS  KR +++DR   R H+R+   R+R ++  R  ++ R+ +
Sbjct: 25  RSPDS--KRSKKDDRTASRTHSRRERSRSRERRRSRERKRQRRSS 67

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>RS20_XYLFT (P66513) 30S ribosomal protein S20|
          Length = 89

 Score = 30.0 bits (66), Expect = 2.6
 Identities = 15/34 (44%), Positives = 22/34 (64%)
 Frame = +1

Query: 295 SVKKRERQNDRHRIRNHARKAEMRTRMKKVFRAL 396
           S KKR +Q      RN A+++ +RT +KKV +AL
Sbjct: 6   SAKKRVKQTVVRNERNTAQRSMLRTAVKKVIKAL 39

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>RS20_XYLFA (P66512) 30S ribosomal protein S20|
          Length = 89

 Score = 30.0 bits (66), Expect = 2.6
 Identities = 15/34 (44%), Positives = 22/34 (64%)
 Frame = +1

Query: 295 SVKKRERQNDRHRIRNHARKAEMRTRMKKVFRAL 396
           S KKR +Q      RN A+++ +RT +KKV +AL
Sbjct: 6   SAKKRVKQTVVRNERNTAQRSMLRTAVKKVIKAL 39

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>RS20_NEIMB (P66508) 30S ribosomal protein S20|
          Length = 87

 Score = 30.0 bits (66), Expect = 2.6
 Identities = 15/39 (38%), Positives = 23/39 (58%)
 Frame = +1

Query: 301 KKRERQNDRHRIRNHARKAEMRTRMKKVFRALEKLRKKA 417
           +KR RQ+ + R  N + +   RT +KKV +A+E   K A
Sbjct: 8   RKRARQSVKQRAHNASLRTAFRTAVKKVLKAVEAGDKAA 46

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>RS20_NEIMA (P66507) 30S ribosomal protein S20|
          Length = 87

 Score = 30.0 bits (66), Expect = 2.6
 Identities = 15/39 (38%), Positives = 23/39 (58%)
 Frame = +1

Query: 301 KKRERQNDRHRIRNHARKAEMRTRMKKVFRALEKLRKKA 417
           +KR RQ+ + R  N + +   RT +KKV +A+E   K A
Sbjct: 8   RKRARQSVKQRAHNASLRTAFRTAVKKVLKAVEAGDKAA 46

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>RS20_NEIG1 (Q5F6Q6) 30S ribosomal protein S20|
          Length = 87

 Score = 30.0 bits (66), Expect = 2.6
 Identities = 15/39 (38%), Positives = 23/39 (58%)
 Frame = +1

Query: 301 KKRERQNDRHRIRNHARKAEMRTRMKKVFRALEKLRKKA 417
           +KR RQ+ + R  N + +   RT +KKV +A+E   K A
Sbjct: 8   RKRARQSVKQRAHNASLRTAFRTAVKKVLKAVEAGDKAA 46

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>RS20_MYCLE (O33132) 30S ribosomal protein S20|
          Length = 86

 Score = 30.0 bits (66), Expect = 2.6
 Identities = 15/44 (34%), Positives = 26/44 (59%)
 Frame = +1

Query: 295 SVKKRERQNDRHRIRNHARKAEMRTRMKKVFRALEKLRKKADAQ 426
           S +KR R N+R R+RN + K+ +RT ++    A+    K+  A+
Sbjct: 6   SQQKRNRTNERARLRNKSVKSSLRTAVRAFREAVHAGEKEKAAK 49

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>RS20_BORBU (P49394) 30S ribosomal protein S20|
          Length = 85

 Score = 30.0 bits (66), Expect = 2.6
 Identities = 18/47 (38%), Positives = 28/47 (59%)
 Frame = +1

Query: 283 RQPDSVKKRERQNDRHRIRNHARKAEMRTRMKKVFRALEKLRKKADA 423
           R+  S  KR RQN + +IRN + K+E++T  K+    + K  KK +A
Sbjct: 2   RKNASALKRSRQNLKRKIRNVSVKSELKTIEKRCINMI-KAGKKDEA 47

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>T2_MOUSE (Q06666) Octapeptide-repeat protein T2|
          Length = 185

 Score = 30.0 bits (66), Expect = 2.6
 Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
 Frame = +1

Query: 232 RRRGLQVVCAAEPPKTGRQPDSVKKRERQNDRHRIRNHARKAE-MRTRMKKVFRALEKLR 408
           R+RG +     E  + GR+ +  + RER+ +R R R   R+AE  R R ++  R  E  R
Sbjct: 70  RQRGRERGREVERHRRGREAERQRGREREAERQRGREAEREAERQRERQRERQRGREAER 129

Query: 409 KK 414
           ++
Sbjct: 130 QR 131

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>RS20_XANOR (Q5H2E4) 30S ribosomal protein S20|
          Length = 89

 Score = 29.6 bits (65), Expect = 3.4
 Identities = 14/35 (40%), Positives = 22/35 (62%)
 Frame = +1

Query: 295 SVKKRERQNDRHRIRNHARKAEMRTRMKKVFRALE 399
           S KKR +Q      RN  +++ +RT +KKV +AL+
Sbjct: 6   SAKKRAKQTIVRNERNTGQRSMLRTAVKKVIKALD 40

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>RS20_XANCP (Q8PBG9) 30S ribosomal protein S20|
          Length = 89

 Score = 29.6 bits (65), Expect = 3.4
 Identities = 14/35 (40%), Positives = 22/35 (62%)
 Frame = +1

Query: 295 SVKKRERQNDRHRIRNHARKAEMRTRMKKVFRALE 399
           S KKR +Q      RN  +++ +RT +KKV +AL+
Sbjct: 6   SAKKRAKQTVVRNERNTGQRSMLRTAVKKVIKALD 40

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>RS20_XANC8 (Q4US37) 30S ribosomal protein S20|
          Length = 89

 Score = 29.6 bits (65), Expect = 3.4
 Identities = 14/35 (40%), Positives = 22/35 (62%)
 Frame = +1

Query: 295 SVKKRERQNDRHRIRNHARKAEMRTRMKKVFRALE 399
           S KKR +Q      RN  +++ +RT +KKV +AL+
Sbjct: 6   SAKKRAKQTVVRNERNTGQRSMLRTAVKKVIKALD 40

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>RS20_XANC5 (Q3BW45) 30S ribosomal protein S20|
          Length = 89

 Score = 29.6 bits (65), Expect = 3.4
 Identities = 14/35 (40%), Positives = 22/35 (62%)
 Frame = +1

Query: 295 SVKKRERQNDRHRIRNHARKAEMRTRMKKVFRALE 399
           S KKR +Q      RN  +++ +RT +KKV +AL+
Sbjct: 6   SAKKRAKQTIVRNERNTGQRSMLRTAVKKVIKALD 40

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>RS20_XANAC (Q8PN22) 30S ribosomal protein S20|
          Length = 89

 Score = 29.6 bits (65), Expect = 3.4
 Identities = 14/35 (40%), Positives = 22/35 (62%)
 Frame = +1

Query: 295 SVKKRERQNDRHRIRNHARKAEMRTRMKKVFRALE 399
           S KKR +Q      RN  +++ +RT +KKV +AL+
Sbjct: 6   SAKKRAKQTIVRNERNTGQRSMLRTAVKKVIKALD 40

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>CAC1G_RAT (O54898) Voltage-dependent T-type calcium channel alpha-1G subunit|
            (Voltage-gated calcium channel alpha subunit Cav3.1)
          Length = 2254

 Score = 29.6 bits (65), Expect = 3.4
 Identities = 14/36 (38%), Positives = 19/36 (52%)
 Frame = +1

Query: 328  HRIRNHARKAEMRTRMKKVFRALEKLRKKADAQPEE 435
            H+ R H  + E R R +K  R LEK R+  + Q  E
Sbjct: 1520 HKCRQHQEEEEARRREEKRLRRLEKKRRSKEKQMAE 1555

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>PTTG_RAT (Q6P767) Pituitary tumor-transforming gene 1 protein-interacting|
           protein precursor (Pituitary tumor-transforming gene
           protein-binding factor) (PTTG-binding factor) (PBF)
          Length = 174

 Score = 29.6 bits (65), Expect = 3.4
 Identities = 14/44 (31%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
 Frame = +1

Query: 256 CAAEPPKTGRQPDSVKKRE-RQNDRHRIRNHARKAEMRTRMKKV 384
           C     K  R+PD   +R  R+ +  R+R   R+AEM++R  ++
Sbjct: 115 CCCCRRKRSRKPDKSDERAMREQEERRVRQEERRAEMKSRHDEI 158

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>RS20_DECAR (Q47BL6) 30S ribosomal protein S20|
          Length = 89

 Score = 29.3 bits (64), Expect = 4.4
 Identities = 15/39 (38%), Positives = 24/39 (61%)
 Frame = +1

Query: 301 KKRERQNDRHRIRNHARKAEMRTRMKKVFRALEKLRKKA 417
           +KR RQ D  R  N + ++ +RT +K+V +A+E   K A
Sbjct: 8   RKRARQADGQRSHNASLRSTLRTAIKRVRQAIEAGDKAA 46

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>RS20_BORGA (Q662D1) 30S ribosomal protein S20|
          Length = 85

 Score = 29.3 bits (64), Expect = 4.4
 Identities = 15/43 (34%), Positives = 26/43 (60%)
 Frame = +1

Query: 283 RQPDSVKKRERQNDRHRIRNHARKAEMRTRMKKVFRALEKLRK 411
           R+  S  KR RQN + +IRN + ++E++T  K+    ++  RK
Sbjct: 2   RKNASALKRSRQNLKRKIRNVSVESELKTIEKRCINMIKAGRK 44

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>INCE_MOUSE (Q9WU62) Inner centromere protein|
          Length = 880

 Score = 29.3 bits (64), Expect = 4.4
 Identities = 15/59 (25%), Positives = 28/59 (47%)
 Frame = +1

Query: 259 AAEPPKTGRQPDSVKKRERQNDRHRIRNHARKAEMRTRMKKVFRALEKLRKKADAQPEE 435
           AAE  +   Q +  ++RE++      R   R+ + R   ++  +  E+LR K + Q  E
Sbjct: 651 AAEARRLAEQREQERRREQERREQERREQERREQERKEQERREQEQERLRAKREMQERE 709

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>CPLX2_NARJA (O42105) Complexin-2 (NJ-synaphin-1A)|
          Length = 134

 Score = 29.3 bits (64), Expect = 4.4
 Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 6/57 (10%)
 Frame = +1

Query: 283 RQPDSVKKRE------RQNDRHRIRNHARKAEMRTRMKKVFRALEKLRKKADAQPEE 435
           + PD+ KK E      RQ +  R + H R    R ++++  R    L+KK + + EE
Sbjct: 26  KDPDAQKKEEERQEALRQQEDERKQKHIRMETEREKVRQQIRDKYGLKKKEEKEAEE 82

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>PTTG_MOUSE (Q8R143) Pituitary tumor-transforming gene 1 protein-interacting|
           protein precursor (Pituitary tumor-transforming gene
           protein-binding factor) (PTTG-binding factor) (PBF)
          Length = 174

 Score = 29.3 bits (64), Expect = 4.4
 Identities = 13/38 (34%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
 Frame = +1

Query: 274 KTGRQPDSVKKRE-RQNDRHRIRNHARKAEMRTRMKKV 384
           K  R+PD   +R  R+ +  R+R   R+AEM++R  ++
Sbjct: 121 KKSRKPDKSDERAMREQEERRVRQEERRAEMKSRHDEI 158

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>ADA2C_RAT (P22086) Alpha-2C adrenergic receptor (Alpha-2C adrenoceptor)|
           (Alpha-2C adrenoreceptor) (Alpha-2 adrenergic receptor
           subtype C4)
          Length = 458

 Score = 29.3 bits (64), Expect = 4.4
 Identities = 21/59 (35%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
 Frame = +1

Query: 190 PIGGFGASAST--GRLRRRGLQVVCAAEPPKTGRQPDSVKKRERQNDRHRIRNHARKAE 360
           P G  GAS +T  G  +  G    CA  PP+T  +PD     ER+  R  +R   R+ E
Sbjct: 250 PAGPDGASPTTENGLGKAAGENGHCA--PPRTEVEPDESSAAERRRRRGALRRGGRRRE 306

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>ADA2C_MOUSE (Q01337) Alpha-2C adrenergic receptor (Alpha-2C adrenoceptor)|
           (Alpha-2C adrenoreceptor) (Alpha-2 adrenergic receptor
           subtype C4)
          Length = 458

 Score = 29.3 bits (64), Expect = 4.4
 Identities = 21/59 (35%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
 Frame = +1

Query: 190 PIGGFGASAST--GRLRRRGLQVVCAAEPPKTGRQPDSVKKRERQNDRHRIRNHARKAE 360
           P G  GAS +T  G  +  G    CA  PP+T  +PD     ER+  R  +R   R+ E
Sbjct: 250 PAGPDGASPTTENGLGKAAGENGHCA--PPRTEVEPDESSAAERRRRRGALRRGGRRRE 306

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>RS20_ZYMMO (Q9Z5V0) 30S ribosomal protein S20|
          Length = 87

 Score = 28.9 bits (63), Expect = 5.8
 Identities = 21/50 (42%), Positives = 25/50 (50%), Gaps = 6/50 (12%)
 Frame = +1

Query: 301 KKRERQNDRHRIRNHARKAEMRTRMKKVFRALEKLRKK------ADAQPE 432
           KKR R+NDR    N  R   +RT +KKV  A+    K       A AQPE
Sbjct: 8   KKRIRRNDRRAEINGNRVNRIRTFIKKVESAIAAGNKSEAETALASAQPE 57

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>NOTC2_RAT (Q9QW30) Neurogenic locus notch homolog protein 2 precursor (Notch 2)|
            [Contains: Notch 2 extracellular truncation; Notch 2
            intracellular domain]
          Length = 2471

 Score = 28.9 bits (63), Expect = 5.8
 Identities = 11/18 (61%), Positives = 11/18 (61%)
 Frame = -1

Query: 385  KPSSSGCASRPCGHGCEC 332
            K   SGCAS PC HG  C
Sbjct: 1372 KDCESGCASNPCQHGGTC 1389

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>NOTC2_MOUSE (O35516) Neurogenic locus notch homolog protein 2 precursor (Notch 2)|
            (Motch B) [Contains: Notch 2 extracellular truncation;
            Notch 2 intracellular domain]
          Length = 2470

 Score = 28.9 bits (63), Expect = 5.8
 Identities = 11/18 (61%), Positives = 11/18 (61%)
 Frame = -1

Query: 385  KPSSSGCASRPCGHGCEC 332
            K   SGCAS PC HG  C
Sbjct: 1370 KDCESGCASNPCQHGGTC 1387

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>RS20_PROMT (Q46J20) 30S ribosomal protein S20|
          Length = 98

 Score = 28.5 bits (62), Expect = 7.6
 Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 6/51 (11%)
 Frame = +1

Query: 292 DSVKKRERQNDRHRIRNHARKAEMRTRMKKVFRALEKLRK------KADAQ 426
           +S KKR +  +R+R+ N   K+ +RT MK+ F A     K      KAD Q
Sbjct: 5   NSAKKRIQIAERNRLENKNYKSTVRTLMKRCFVACGIFEKEPGDESKADLQ 55

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>RR20_GUITH (O78486) Chloroplast 30S ribosomal protein S20|
          Length = 95

 Score = 28.5 bits (62), Expect = 7.6
 Identities = 14/35 (40%), Positives = 21/35 (60%)
 Frame = +1

Query: 295 SVKKRERQNDRHRIRNHARKAEMRTRMKKVFRALE 399
           S  KR   N+R+R+RN   K+ ++T  KK   A+E
Sbjct: 6   SAIKRIELNERNRLRNKTYKSMLKTYYKKCIVAIE 40

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>UBP10_YEAST (P53874) Ubiquitin carboxyl-terminal hydrolase 10 (EC 3.1.2.15)|
           (Ubiquitin thioesterase 10)
           (Ubiquitin-specific-processing protease 10)
           (Deubiquitinating enzyme 10) (Disrupter of telomere
           silencing protein 4)
          Length = 792

 Score = 28.5 bits (62), Expect = 7.6
 Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 4/59 (6%)
 Frame = +1

Query: 208 ASASTGRLRRRGLQVVCAAEPPKTGRQPDSVKKRERQNDR--HRIRNHA--RKAEMRTR 372
           A+ +TG  +   L    + EPP +  + D V K E +     H  R++   RKA ++ R
Sbjct: 105 AADATGAKKSAELSTELSTEPPSSSSEDDKVGKEEEEEGEIFHEARDYVEPRKASLKER 163

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>RSRC1_MOUSE (Q9DBU6) Arginine/serine-rich coiled coil protein 1|
          Length = 334

 Score = 28.5 bits (62), Expect = 7.6
 Identities = 22/80 (27%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
 Frame = +1

Query: 208 ASASTGRLRRRGLQVVCAAEPPKTGRQPDSVKKRERQNDRHRIRNHARKAE----MRTRM 375
           +S+S G  R+R          P   ++  S  +  R   R R R+H+R +E     RTR 
Sbjct: 72  SSSSYGSRRKRSRSRSRGRGKPYRVQRSRSKSRTRRSRSRPRPRSHSRSSERSSHRRTRS 131

Query: 376 KKVFRALEKLRKKADAQPEE 435
           +   R   K+R K   + E+
Sbjct: 132 RSRDRDRRKVRDKEKREKEK 151

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>NOTC3_MOUSE (Q61982) Neurogenic locus notch homolog protein 3 precursor (Notch|
           3) [Contains: Notch 3 extracellular truncation; Notch 3
           intracellular domain]
          Length = 2318

 Score = 28.1 bits (61), Expect = 9.9
 Identities = 13/29 (44%), Positives = 13/29 (44%)
 Frame = -1

Query: 400 FQGL*KPSSSGCASRPCGHGCECGVCHSG 314
           FQG        C SRPC HG  C V   G
Sbjct: 113 FQGPDCSQPDPCVSRPCVHGAPCSVGPDG 141

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>DLL3_MOUSE (O88516) Delta-like protein 3 precursor (Drosophila Delta homolog|
           3) (M-Delta-3)
          Length = 592

 Score = 28.1 bits (61), Expect = 9.9
 Identities = 11/18 (61%), Positives = 11/18 (61%)
 Frame = -1

Query: 367 CASRPCGHGCECGVCHSG 314
           CASRPC HG  C    SG
Sbjct: 431 CASRPCAHGGRCYAHFSG 448

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>SLIT1_MOUSE (Q80TR4) Slit homolog 1 protein precursor (Slit-1)|
          Length = 1531

 Score = 28.1 bits (61), Expect = 9.9
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = -1

Query: 379  SSSGCASRPCGHGCECGVCHS 317
            S  GC+S PCG+G   G CH+
Sbjct: 964  SLDGCSSNPCGNG---GTCHA 981

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>CHCH3_HUMAN (Q9NX63) Coiled-coil-helix-coiled-coil-helix domain-containing|
           protein 3
          Length = 227

 Score = 28.1 bits (61), Expect = 9.9
 Identities = 26/90 (28%), Positives = 39/90 (43%), Gaps = 14/90 (15%)
 Frame = +1

Query: 196 GGFGASASTGRLRRRGLQVVCAAEPPKTGRQPDSVKKRERQNDRHR-----------IRN 342
           G +GAS S   L+RR  + + A E  K   +     K+ ++ DR R           +R 
Sbjct: 51  GAYGASVSDEELKRRVAEEL-ALEQAKKESEDQKRLKQAKELDRERAAANEQLTRAILRE 109

Query: 343 HARKAEMRTRMKKVFRALE---KLRKKADA 423
                E R + K + R LE   ++ KK DA
Sbjct: 110 RICSEEERAKAKHLARQLEEKDRVLKKQDA 139

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>CCDC3_HUMAN (Q9BQI4) Coiled-coil domain-containing protein 3 precursor|
          Length = 270

 Score = 28.1 bits (61), Expect = 9.9
 Identities = 17/56 (30%), Positives = 31/56 (55%)
 Frame = +1

Query: 247 QVVCAAEPPKTGRQPDSVKKRERQNDRHRIRNHARKAEMRTRMKKVFRALEKLRKK 414
           +++C++       + D VKK +++      RN     ++R R+KKV R+L + RKK
Sbjct: 183 RLMCSSVQKALFEEEDHVKKLQQKVATLEKRNR----QLRERVKKVKRSLRQARKK 234

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>CD2L1_HUMAN (P21127) PITSLRE serine/threonine-protein kinase CDC2L1 (EC|
           2.7.11.22) (Galactosyltransferase-associated protein
           kinase p58/GTA) (Cell division cycle 2-like protein
           kinase 1) (CLK-1) (CDK11) (p58 CLK-1)
          Length = 795

 Score = 28.1 bits (61), Expect = 9.9
 Identities = 16/50 (32%), Positives = 28/50 (56%)
 Frame = +1

Query: 286 QPDSVKKRERQNDRHRIRNHARKAEMRTRMKKVFRALEKLRKKADAQPEE 435
           Q  + ++ ERQ  R   R H+R+   R R++++ R  E+ RK  + Q E+
Sbjct: 141 QDKARREWERQKRREMAREHSRRE--RDRLEQLERKRERERKMREQQKEQ 188

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>YMT4_YEAST (Q04213) Hypothetical 55.4 kDa protein in MCM1-NUP116 intergenic|
           region
          Length = 475

 Score = 28.1 bits (61), Expect = 9.9
 Identities = 14/53 (26%), Positives = 25/53 (47%)
 Frame = +1

Query: 277 TGRQPDSVKKRERQNDRHRIRNHARKAEMRTRMKKVFRALEKLRKKADAQPEE 435
           T +Q     + E + +  +++   RK   RT+ KKV  +  K   K  A+ E+
Sbjct: 234 TRQQAIDASEEEEEEEEEKVQEAVRKRPQRTKTKKVVVSKTKPNPKTKAKKEK 286

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>DLL3_RAT (O88671) Delta-like protein 3 precursor (Drosophila Delta homolog|
           3)
          Length = 589

 Score = 28.1 bits (61), Expect = 9.9
 Identities = 11/18 (61%), Positives = 11/18 (61%)
 Frame = -1

Query: 367 CASRPCGHGCECGVCHSG 314
           CASRPC HG  C    SG
Sbjct: 435 CASRPCAHGGRCYAHFSG 452

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>DEI_DROME (P41894) Helix-loop-helix protein delilah|
          Length = 360

 Score = 28.1 bits (61), Expect = 9.9
 Identities = 15/49 (30%), Positives = 22/49 (44%)
 Frame = +1

Query: 262 AEPPKTGRQPDSVKKRERQNDRHRIRNHARKAEMRTRMKKVFRALEKLR 408
           AEP    R+    K + +     + R     A  RTRM+++  A E LR
Sbjct: 70  AEPASKSRKNAPTKSKTKAPPLSKYRRKTANARERTRMREINTAFETLR 118

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>RS20_AQUAE (O67643) 30S ribosomal protein S20|
          Length = 94

 Score = 28.1 bits (61), Expect = 9.9
 Identities = 13/33 (39%), Positives = 20/33 (60%)
 Frame = +1

Query: 301 KKRERQNDRHRIRNHARKAEMRTRMKKVFRALE 399
           KKR R++ + R+RN    + MRT +K   R +E
Sbjct: 8   KKRMRRDAKRRLRNRYHLSRMRTYIKNFRRMIE 40

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>NOTC2_HUMAN (Q04721) Neurogenic locus notch homolog protein 2 precursor (Notch 2)|
            (hN2) [Contains: Notch 2 extracellular truncation; Notch
            2 intracellular domain]
          Length = 2471

 Score = 28.1 bits (61), Expect = 9.9
 Identities = 12/18 (66%), Positives = 12/18 (66%)
 Frame = -1

Query: 373  SGCASRPCGHGCECGVCH 320
            SGCAS PC HG   G CH
Sbjct: 1376 SGCASSPCQHG---GSCH 1390

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>BHLH8_MOUSE (Q9QYC3) Class B basic helix-loop-helix protein 8 (bHLHB8) (Muscle,|
           intestine and stomach expression 1) (MIST-1)
          Length = 197

 Score = 28.1 bits (61), Expect = 9.9
 Identities = 23/78 (29%), Positives = 33/78 (42%), Gaps = 6/78 (7%)
 Frame = +1

Query: 190 PIGGFGASASTGRLRRR------GLQVVCAAEPPKTGRQPDSVKKRERQNDRHRIRNHAR 351
           P  G G S  T  LR R      G   V        GR+ +SV++R   N+R R R H  
Sbjct: 29  PQSGSGGSELTKGLRSRTARASGGRGEVSRRRQGSGGRRENSVQRRLESNERERQRMH-- 86

Query: 352 KAEMRTRMKKVFRALEKL 405
                 ++   F+AL ++
Sbjct: 87  ------KLNNAFQALREV 98

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>PDCD7_HUMAN (Q8N8D1) Programmed cell death protein 7 (ES18) (HES18)|
          Length = 485

 Score = 28.1 bits (61), Expect = 9.9
 Identities = 25/87 (28%), Positives = 41/87 (47%), Gaps = 25/87 (28%)
 Frame = +1

Query: 226 RLRRRGLQVVCAAEPPKTGRQPDSVK--KRERQNDRHRIR-------------------- 339
           R+RRR L++   A   +  R+ ++ +  +RE++ DR R++                    
Sbjct: 241 RVRRRRLRLRERAREREAEREAEAARAVEREQEIDRWRVKCVQEVEEKKREQELKAAADG 300

Query: 340 --NHARKAEMRT-RMKKVFRALEKLRK 411
             +  RK +  T RM  + RALEKLRK
Sbjct: 301 VLSEVRKKQADTKRMVDILRALEKLRK 327

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>DDX46_RAT (Q62780) Probable ATP-dependent RNA helicase DDX46 (EC 3.6.1.-)|
           (DEAD box protein 46) (Helicase of 117.4 kDa)
          Length = 1032

 Score = 28.1 bits (61), Expect = 9.9
 Identities = 17/71 (23%), Positives = 32/71 (45%)
 Frame = +1

Query: 205 GASASTGRLRRRGLQVVCAAEPPKTGRQPDSVKKRERQNDRHRIRNHARKAEMRTRMKKV 384
           G+ +     R R  +     +  K  ++    K+ E++ D      +  + EMR R ++V
Sbjct: 108 GSKSKKAENRSRSKEKAEGGDSSKEKKKDKDDKEDEKEKDAGNFDQNKLEEEMRKRKERV 167

Query: 385 FRALEKLRKKA 417
            +  E+ RKKA
Sbjct: 168 EKWREEQRKKA 178

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>DDX46_PONPY (Q5R6D8) Probable ATP-dependent RNA helicase DDX46 (EC 3.6.1.-)|
           (DEAD box protein 46)
          Length = 1032

 Score = 28.1 bits (61), Expect = 9.9
 Identities = 17/62 (27%), Positives = 29/62 (46%)
 Frame = +1

Query: 232 RRRGLQVVCAAEPPKTGRQPDSVKKRERQNDRHRIRNHARKAEMRTRMKKVFRALEKLRK 411
           R R  +     E  K  ++    K+ E++ D      +  + EMR R ++V +  E+ RK
Sbjct: 117 RSRSKEKTDGGESSKEKKKDKDDKEDEKEKDAGNFDQNKLEEEMRKRKERVEKWREEQRK 176

Query: 412 KA 417
           KA
Sbjct: 177 KA 178

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>DDX46_HUMAN (Q7L014) Probable ATP-dependent RNA helicase DDX46 (EC 3.6.1.-)|
           (DEAD box protein 46) (PRP5 homolog)
          Length = 1032

 Score = 28.1 bits (61), Expect = 9.9
 Identities = 17/62 (27%), Positives = 29/62 (46%)
 Frame = +1

Query: 232 RRRGLQVVCAAEPPKTGRQPDSVKKRERQNDRHRIRNHARKAEMRTRMKKVFRALEKLRK 411
           R R  +     E  K  ++    K+ E++ D      +  + EMR R ++V +  E+ RK
Sbjct: 117 RSRSKEKTDGGESSKEKKKDKDDKEDEKEKDAGNFDQNKLEEEMRKRKERVEKWREEQRK 176

Query: 412 KA 417
           KA
Sbjct: 177 KA 178

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>CD2L2_HUMAN (Q9UQ88) PITSLRE serine/threonine-protein kinase CDC2L2 (EC|
           2.7.11.22) (Galactosyltransferase-associated protein
           kinase p58/GTA) (Cell division cycle 2-like protein
           kinase 2) (CDK11)
          Length = 780

 Score = 28.1 bits (61), Expect = 9.9
 Identities = 16/50 (32%), Positives = 28/50 (56%)
 Frame = +1

Query: 286 QPDSVKKRERQNDRHRIRNHARKAEMRTRMKKVFRALEKLRKKADAQPEE 435
           Q  + ++ ERQ  R   R H+R+   R R++++ R  E+ RK  + Q E+
Sbjct: 129 QDKARREWERQKRREMAREHSRRE--RDRLEQLERKRERERKMREQQKEQ 176

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>CAC1H_HUMAN (O95180) Voltage-dependent T-type calcium channel alpha-1H subunit|
            (Voltage-gated calcium channel alpha subunit Cav3.2)
            (Low-voltage-activated calcium channel alpha1 3.2
            subunit)
          Length = 2353

 Score = 28.1 bits (61), Expect = 9.9
 Identities = 13/35 (37%), Positives = 17/35 (48%)
 Frame = +1

Query: 328  HRIRNHARKAEMRTRMKKVFRALEKLRKKADAQPE 432
            H+ R H    E R R +K  R LE+ R+     PE
Sbjct: 1559 HKCRQHQEAEEARRREEKRLRRLERRRRSTFPSPE 1593

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>CAC1H_MOUSE (O88427) Voltage-dependent T-type calcium channel alpha-1H subunit|
            (Voltage-gated calcium channel alpha subunit Cav3.2)
          Length = 2365

 Score = 28.1 bits (61), Expect = 9.9
 Identities = 13/35 (37%), Positives = 17/35 (48%)
 Frame = +1

Query: 328  HRIRNHARKAEMRTRMKKVFRALEKLRKKADAQPE 432
            H+ R H    E R R +K  R LE+ R+     PE
Sbjct: 1570 HKCRQHQEAEEARRREEKRLRRLERRRRSTFPNPE 1604



 Score = 28.1 bits (61), Expect = 9.9
 Identities = 13/39 (33%), Positives = 15/39 (38%)
 Frame = +2

Query: 164 ACRPPTPPSPSVGSEPXXXXXXXXXXXCRWCAPPSRPRL 280
           AC PP+PPSP  G              C    P  R R+
Sbjct: 554 ACVPPSPPSPGHGPPDSESVHSIYHADCHVEGPQERARV 592


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.316    0.128    0.370 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 46,865,567
Number of Sequences: 219361
Number of extensions: 686595
Number of successful extensions: 3976
Number of sequences better than 10.0: 105
Number of HSP's better than 10.0 without gapping: 3490
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3961
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2570413340
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result