| Clone Name | bast79d04 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_470902.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2235 Score = 107 bits (54), Expect = 3e-20 Identities = 146/177 (82%) Strand = Plus / Plus Query: 274 gacgtgggattgttcagagtgtcgggtgtgttcccaaccatttccaaggatggcgccaag 333 |||||||| |||||||| ||||| || |||| ||| ||||| |||||||| ||| ||||| Sbjct: 1174 gacgtggggttgttcagggtgtccggcgtgtgcccgaccatctccaaggacggctccaag 1233 Query: 334 cttgccttcgtcgacaatgagttcaaggctgtatggcttgccgatacccaaggcttgcgc 393 || || ||||| ||||| ||||||||||| || ||||| ||||| | ||| ||| ||||| Sbjct: 1234 ctcgcgttcgtggacaacgagttcaaggcggtgtggctcgccgacagccatggcctgcgc 1293 Query: 394 gtcgtctacgagaagcggngctccaacgccgtcttctcgacggcgtggaaccagaac 450 || || ||||||||| | | ||||| ||| ||||| |||||||||||||||||| Sbjct: 1294 gtggtgtacgagaagaaggggcccaacagcgtgttctccacggcgtggaaccagaac 1350 Score = 89.7 bits (45), Expect = 8e-15 Identities = 114/137 (83%) Strand = Plus / Plus Query: 52 gaggcgcagtaccgtcacatcgagatcttcgacgtctcctcgccggaccagcccatgcag 111 |||| ||||||||| |||||||||||||||||||| |||||||||| ||||| || || Sbjct: 946 gaggagcagtaccggcacatcgagatcttcgacgtggcctcgccggagcagccggtgaag 1005 Query: 112 atcagccagaaaatcagacccaagggcgaccactacaaccctttcgtcgccgacgccgga 171 |||| ||||| | || |||||| |||||||| |||||| |||||| ||||| ||| Sbjct: 1006 atcacgcagaagactaggcccaagaccgaccacttcaaccccttcgtcctcgacggcggc 1065 Query: 172 agccgcatcggctacca 188 ||||||||||| ||||| Sbjct: 1066 agccgcatcgggtacca 1082
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 107 bits (54), Expect = 3e-20 Identities = 146/177 (82%) Strand = Plus / Plus Query: 274 gacgtgggattgttcagagtgtcgggtgtgttcccaaccatttccaaggatggcgccaag 333 |||||||| |||||||| ||||| || |||| ||| ||||| |||||||| ||| ||||| Sbjct: 16264828 gacgtggggttgttcagggtgtccggcgtgtgcccgaccatctccaaggacggctccaag 16264887 Query: 334 cttgccttcgtcgacaatgagttcaaggctgtatggcttgccgatacccaaggcttgcgc 393 || || ||||| ||||| ||||||||||| || ||||| ||||| | ||| ||| ||||| Sbjct: 16264888 ctcgcgttcgtggacaacgagttcaaggcggtgtggctcgccgacagccatggcctgcgc 16264947 Query: 394 gtcgtctacgagaagcggngctccaacgccgtcttctcgacggcgtggaaccagaac 450 || || ||||||||| | | ||||| ||| ||||| |||||||||||||||||| Sbjct: 16264948 gtggtgtacgagaagaaggggcccaacagcgtgttctccacggcgtggaaccagaac 16265004 Score = 89.7 bits (45), Expect = 8e-15 Identities = 114/137 (83%) Strand = Plus / Plus Query: 52 gaggcgcagtaccgtcacatcgagatcttcgacgtctcctcgccggaccagcccatgcag 111 |||| ||||||||| |||||||||||||||||||| |||||||||| ||||| || || Sbjct: 16264600 gaggagcagtaccggcacatcgagatcttcgacgtggcctcgccggagcagccggtgaag 16264659 Query: 112 atcagccagaaaatcagacccaagggcgaccactacaaccctttcgtcgccgacgccgga 171 |||| ||||| | || |||||| |||||||| |||||| |||||| ||||| ||| Sbjct: 16264660 atcacgcagaagactaggcccaagaccgaccacttcaaccccttcgtcctcgacggcggc 16264719 Query: 172 agccgcatcggctacca 188 ||||||||||| ||||| Sbjct: 16264720 agccgcatcgggtacca 16264736 Score = 75.8 bits (38), Expect = 1e-10 Identities = 122/150 (81%) Strand = Plus / Plus Query: 251 acaagatgcactccccacacacagacgtgggattgttcagagtgtcgggtgtgttcccaa 310 ||||| |||| ||||||||| ||| || || ||||||| ||||| ||||||||||||| Sbjct: 11241711 acaagctgcaatccccacacgaagatgtcggtgtgttcagggtgtccggtgtgttcccaa 11241770 Query: 311 ccatttccaaggatggcgccaagcttgccttcgtcgacaatgagttcaaggctgtatggc 370 | ||||||| ||||| | ||||||||||||| ||||| |||||||| | || |||| Sbjct: 11241771 cattttccaaagatggttctcagcttgccttcgttgacaacgagttcaaatccgtgtggc 11241830 Query: 371 ttgccgatacccaaggcttgcgcgtcgtct 400 | ||||||| |||||| |||| ||||||| Sbjct: 11241831 tggccgatagccaagggatgcgtgtcgtct 11241860
>gb|AC118134.3| Oryza sativa chromosome 3 BAC OSJNBb0041J20 genomic sequence, complete sequence Length = 135585 Score = 107 bits (54), Expect = 3e-20 Identities = 146/177 (82%) Strand = Plus / Plus Query: 274 gacgtgggattgttcagagtgtcgggtgtgttcccaaccatttccaaggatggcgccaag 333 |||||||| |||||||| ||||| || |||| ||| ||||| |||||||| ||| ||||| Sbjct: 62844 gacgtggggttgttcagggtgtccggcgtgtgcccgaccatctccaaggacggctccaag 62903 Query: 334 cttgccttcgtcgacaatgagttcaaggctgtatggcttgccgatacccaaggcttgcgc 393 || || ||||| ||||| ||||||||||| || ||||| ||||| | ||| ||| ||||| Sbjct: 62904 ctcgcgttcgtggacaacgagttcaaggcggtgtggctcgccgacagccatggcctgcgc 62963 Query: 394 gtcgtctacgagaagcggngctccaacgccgtcttctcgacggcgtggaaccagaac 450 || || ||||||||| | | ||||| ||| ||||| |||||||||||||||||| Sbjct: 62964 gtggtgtacgagaagaaggggcccaacagcgtgttctccacggcgtggaaccagaac 63020 Score = 89.7 bits (45), Expect = 8e-15 Identities = 114/137 (83%) Strand = Plus / Plus Query: 52 gaggcgcagtaccgtcacatcgagatcttcgacgtctcctcgccggaccagcccatgcag 111 |||| ||||||||| |||||||||||||||||||| |||||||||| ||||| || || Sbjct: 62616 gaggagcagtaccggcacatcgagatcttcgacgtggcctcgccggagcagccggtgaag 62675 Query: 112 atcagccagaaaatcagacccaagggcgaccactacaaccctttcgtcgccgacgccgga 171 |||| ||||| | || |||||| |||||||| |||||| |||||| ||||| ||| Sbjct: 62676 atcacgcagaagactaggcccaagaccgaccacttcaaccccttcgtcctcgacggcggc 62735 Query: 172 agccgcatcggctacca 188 ||||||||||| ||||| Sbjct: 62736 agccgcatcgggtacca 62752
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 107 bits (54), Expect = 3e-20 Identities = 146/177 (82%) Strand = Plus / Plus Query: 274 gacgtgggattgttcagagtgtcgggtgtgttcccaaccatttccaaggatggcgccaag 333 |||||||| |||||||| ||||| || |||| ||| ||||| |||||||| ||| ||||| Sbjct: 16258461 gacgtggggttgttcagggtgtccggcgtgtgcccgaccatctccaaggacggctccaag 16258520 Query: 334 cttgccttcgtcgacaatgagttcaaggctgtatggcttgccgatacccaaggcttgcgc 393 || || ||||| ||||| ||||||||||| || ||||| ||||| | ||| ||| ||||| Sbjct: 16258521 ctcgcgttcgtggacaacgagttcaaggcggtgtggctcgccgacagccatggcctgcgc 16258580 Query: 394 gtcgtctacgagaagcggngctccaacgccgtcttctcgacggcgtggaaccagaac 450 || || ||||||||| | | ||||| ||| ||||| |||||||||||||||||| Sbjct: 16258581 gtggtgtacgagaagaaggggcccaacagcgtgttctccacggcgtggaaccagaac 16258637 Score = 89.7 bits (45), Expect = 8e-15 Identities = 114/137 (83%) Strand = Plus / Plus Query: 52 gaggcgcagtaccgtcacatcgagatcttcgacgtctcctcgccggaccagcccatgcag 111 |||| ||||||||| |||||||||||||||||||| |||||||||| ||||| || || Sbjct: 16258233 gaggagcagtaccggcacatcgagatcttcgacgtggcctcgccggagcagccggtgaag 16258292 Query: 112 atcagccagaaaatcagacccaagggcgaccactacaaccctttcgtcgccgacgccgga 171 |||| ||||| | || |||||| |||||||| |||||| |||||| ||||| ||| Sbjct: 16258293 atcacgcagaagactaggcccaagaccgaccacttcaaccccttcgtcctcgacggcggc 16258352 Query: 172 agccgcatcggctacca 188 ||||||||||| ||||| Sbjct: 16258353 agccgcatcgggtacca 16258369 Score = 75.8 bits (38), Expect = 1e-10 Identities = 122/150 (81%) Strand = Plus / Plus Query: 251 acaagatgcactccccacacacagacgtgggattgttcagagtgtcgggtgtgttcccaa 310 ||||| |||| ||||||||| ||| || || ||||||| ||||| ||||||||||||| Sbjct: 11238474 acaagctgcaatccccacacgaagatgtcggtgtgttcagggtgtccggtgtgttcccaa 11238533 Query: 311 ccatttccaaggatggcgccaagcttgccttcgtcgacaatgagttcaaggctgtatggc 370 | ||||||| ||||| | ||||||||||||| ||||| |||||||| | || |||| Sbjct: 11238534 cattttccaaagatggttctcagcttgccttcgttgacaacgagttcaaatccgtgtggc 11238593 Query: 371 ttgccgatacccaaggcttgcgcgtcgtct 400 | ||||||| |||||| |||| ||||||| Sbjct: 11238594 tggccgatagccaagggatgcgtgtcgtct 11238623
>dbj|AK111515.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002E06, full insert sequence Length = 2363 Score = 107 bits (54), Expect = 3e-20 Identities = 146/177 (82%) Strand = Plus / Plus Query: 274 gacgtgggattgttcagagtgtcgggtgtgttcccaaccatttccaaggatggcgccaag 333 |||||||| |||||||| ||||| || |||| ||| ||||| |||||||| ||| ||||| Sbjct: 1239 gacgtggggttgttcagggtgtccggcgtgtgcccgaccatctccaaggacggctccaag 1298 Query: 334 cttgccttcgtcgacaatgagttcaaggctgtatggcttgccgatacccaaggcttgcgc 393 || || ||||| ||||| ||||||||||| || ||||| ||||| | ||| ||| ||||| Sbjct: 1299 ctcgcgttcgtggacaacgagttcaaggcggtgtggctcgccgacagccatggcctgcgc 1358 Query: 394 gtcgtctacgagaagcggngctccaacgccgtcttctcgacggcgtggaaccagaac 450 || || ||||||||| | | ||||| ||| ||||| |||||||||||||||||| Sbjct: 1359 gtggtgtacgagaagaaggggcccaacagcgtgttctccacggcgtggaaccagaac 1415 Score = 97.6 bits (49), Expect = 3e-17 Identities = 115/137 (83%) Strand = Plus / Plus Query: 52 gaggcgcagtaccgtcacatcgagatcttcgacgtctcctcgccggaccagcccatgcag 111 |||| ||||||||| |||||||||||||||||||| |||||||||| ||||| || || Sbjct: 1011 gaggagcagtaccggcacatcgagatcttcgacgtggcctcgccggagcagccggtgaag 1070 Query: 112 atcagccagaaaatcagacccaagggcgaccactacaaccctttcgtcgccgacgccgga 171 |||| ||||| | || ||||||| |||||||| |||||| |||||| ||||| ||| Sbjct: 1071 atcacgcagaagactaggcccaaggccgaccacttcaaccccttcgtcctcgacggcggc 1130 Query: 172 agccgcatcggctacca 188 ||||||||||| ||||| Sbjct: 1131 agccgcatcgggtacca 1147
>gb|AC145491.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNAb0085H08, from chromosome 3, complete sequence Length = 130656 Score = 75.8 bits (38), Expect = 1e-10 Identities = 122/150 (81%) Strand = Plus / Plus Query: 251 acaagatgcactccccacacacagacgtgggattgttcagagtgtcgggtgtgttcccaa 310 ||||| |||| ||||||||| ||| || || ||||||| ||||| ||||||||||||| Sbjct: 20664 acaagctgcaatccccacacgaagatgtcggtgtgttcagggtgtccggtgtgttcccaa 20723 Query: 311 ccatttccaaggatggcgccaagcttgccttcgtcgacaatgagttcaaggctgtatggc 370 | ||||||| ||||| | ||||||||||||| ||||| |||||||| | || |||| Sbjct: 20724 cattttccaaagatggttctcagcttgccttcgttgacaacgagttcaaatccgtgtggc 20783 Query: 371 ttgccgatacccaaggcttgcgcgtcgtct 400 | ||||||| |||||| |||| ||||||| Sbjct: 20784 tggccgatagccaagggatgcgtgtcgtct 20813
>gb|AC118340.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0085H08, from chromosome 3, complete sequence Length = 126708 Score = 75.8 bits (38), Expect = 1e-10 Identities = 122/150 (81%) Strand = Plus / Minus Query: 251 acaagatgcactccccacacacagacgtgggattgttcagagtgtcgggtgtgttcccaa 310 ||||| |||| ||||||||| ||| || || ||||||| ||||| ||||||||||||| Sbjct: 39337 acaagctgcaatccccacacgaagatgtcggtgtgttcagggtgtccggtgtgttcccaa 39278 Query: 311 ccatttccaaggatggcgccaagcttgccttcgtcgacaatgagttcaaggctgtatggc 370 | ||||||| ||||| | ||||||||||||| ||||| |||||||| | || |||| Sbjct: 39277 cattttccaaagatggttctcagcttgccttcgttgacaacgagttcaaatccgtgtggc 39218 Query: 371 ttgccgatacccaaggcttgcgcgtcgtct 400 | ||||||| |||||| |||| ||||||| Sbjct: 39217 tggccgatagccaagggatgcgtgtcgtct 39188
>dbj|AK102644.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033100G21, full insert sequence Length = 2495 Score = 75.8 bits (38), Expect = 1e-10 Identities = 122/150 (81%) Strand = Plus / Plus Query: 251 acaagatgcactccccacacacagacgtgggattgttcagagtgtcgggtgtgttcccaa 310 ||||| |||| ||||||||| ||| || || ||||||| ||||| ||||||||||||| Sbjct: 1210 acaagctgcaatccccacacgaagatgtcggtgtgttcagggtgtccggtgtgttcccaa 1269 Query: 311 ccatttccaaggatggcgccaagcttgccttcgtcgacaatgagttcaaggctgtatggc 370 | ||||||| ||||| | ||||||||||||| ||||| |||||||| | || |||| Sbjct: 1270 cattttccaaagatggttctcagcttgccttcgttgacaacgagttcaaatccgtgtggc 1329 Query: 371 ttgccgatacccaaggcttgcgcgtcgtct 400 | ||||||| |||||| |||| ||||||| Sbjct: 1330 tggccgatagccaagggatgcgtgtcgtct 1359
>dbj|AK065474.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013023F11, full insert sequence Length = 2495 Score = 75.8 bits (38), Expect = 1e-10 Identities = 122/150 (81%) Strand = Plus / Plus Query: 251 acaagatgcactccccacacacagacgtgggattgttcagagtgtcgggtgtgttcccaa 310 ||||| |||| ||||||||| ||| || || ||||||| ||||| ||||||||||||| Sbjct: 1210 acaagctgcaatccccacacgaagatgtcggtgtgttcagggtgtccggtgtgttcccaa 1269 Query: 311 ccatttccaaggatggcgccaagcttgccttcgtcgacaatgagttcaaggctgtatggc 370 | ||||||| ||||| | ||||||||||||| ||||| |||||||| | || |||| Sbjct: 1270 cattttccaaagatggttctcagcttgccttcgttgacaacgagttcaaatccgtgtggc 1329 Query: 371 ttgccgatacccaaggcttgcgcgtcgtct 400 | ||||||| |||||| |||| ||||||| Sbjct: 1330 tggccgatagccaagggatgcgtgtcgtct 1359
>dbj|AK061751.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-G10, full insert sequence Length = 1763 Score = 75.8 bits (38), Expect = 1e-10 Identities = 122/150 (81%) Strand = Plus / Plus Query: 251 acaagatgcactccccacacacagacgtgggattgttcagagtgtcgggtgtgttcccaa 310 ||||| |||| ||||||||| ||| || || ||||||| ||||| ||||||||||||| Sbjct: 530 acaagctgcaatccccacacgaagatgtcggtgtgttcagggtgtccggtgtgttcccaa 589 Query: 311 ccatttccaaggatggcgccaagcttgccttcgtcgacaatgagttcaaggctgtatggc 370 | ||||||| ||||| | ||||||||||||| ||||| |||||||| | || |||| Sbjct: 590 cattttccaaagatggttctcagcttgccttcgttgacaacgagttcaaatccgtgtggc 649 Query: 371 ttgccgatacccaaggcttgcgcgtcgtct 400 | ||||||| |||||| |||| ||||||| Sbjct: 650 tggccgatagccaagggatgcgtgtcgtct 679
>ref|XM_369967.1| Magnaporthe grisea 70-15 hypothetical protein (MG06482.4) partial mRNA Length = 1548 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 67 cacatcgagatcttcgacgtc 87 ||||||||||||||||||||| Sbjct: 609 cacatcgagatcttcgacgtc 589
>gb|AF525688.1| Magnaporthe grisea MAP kinase kinase (mkk1) gene, complete cds Length = 2500 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 67 cacatcgagatcttcgacgtc 87 ||||||||||||||||||||| Sbjct: 1073 cacatcgagatcttcgacgtc 1053
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 56 cgcagtaccgtcacatcgagatcttcgac 84 |||||||| | |||||||||||||||||| Sbjct: 13931474 cgcagtacaggcacatcgagatcttcgac 13931446 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 423 cgtcttctcgacggcgtggaaccagaac 450 ||||||||| ||| |||||||||||||| Sbjct: 13931089 cgtcttctccacgtcgtggaaccagaac 13931062
>dbj|AK110931.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-173-F10, full insert sequence Length = 2745 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 56 cgcagtaccgtcacatcgagatcttcgac 84 |||||||| | |||||||||||||||||| Sbjct: 1066 cgcagtacaggcacatcgagatcttcgac 1094 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 423 cgtcttctcgacggcgtggaaccagaac 450 ||||||||| ||| |||||||||||||| Sbjct: 1451 cgtcttctccacgtcgtggaaccagaac 1478
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 56 cgcagtaccgtcacatcgagatcttcgac 84 |||||||| | |||||||||||||||||| Sbjct: 13885754 cgcagtacaggcacatcgagatcttcgac 13885726 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 423 cgtcttctcgacggcgtggaaccagaac 450 ||||||||| ||| |||||||||||||| Sbjct: 13885369 cgtcttctccacgtcgtggaaccagaac 13885342
>emb|AL928747.3|CNS08CBK Oryza sativa chromosome 12, . BAC OSJNBa0017A21 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 144552 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 56 cgcagtaccgtcacatcgagatcttcgac 84 |||||||| | |||||||||||||||||| Sbjct: 68102 cgcagtacaggcacatcgagatcttcgac 68074 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 423 cgtcttctcgacggcgtggaaccagaac 450 ||||||||| ||| |||||||||||||| Sbjct: 67717 cgtcttctccacgtcgtggaaccagaac 67690
>gb|AC165313.7| Mus musculus chromosome 5, clone RP24-294J23, complete sequence Length = 137597 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 346 gacaatgagttcaaggctgt 365 |||||||||||||||||||| Sbjct: 130764 gacaatgagttcaaggctgt 130783
>gb|AC165335.3| Mus musculus BAC clone RP24-481H19 from chromosome 5, complete sequence Length = 212783 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 346 gacaatgagttcaaggctgt 365 |||||||||||||||||||| Sbjct: 30400 gacaatgagttcaaggctgt 30381
>gb|AC110538.6| Mus musculus chromosome 5, clone RP23-71L23, complete sequence Length = 205923 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 346 gacaatgagttcaaggctgt 365 |||||||||||||||||||| Sbjct: 6576 gacaatgagttcaaggctgt 6595
>gb|AC160551.4| Mus musculus chromosome 5, clone RP23-296C20, complete sequence Length = 173331 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 346 gacaatgagttcaaggctgt 365 |||||||||||||||||||| Sbjct: 84727 gacaatgagttcaaggctgt 84746
>dbj|AP008231.1| Synechococcus elongatus PCC 6301 DNA, complete genome Length = 2696255 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 155 tcgtcgccgacgccggaagc 174 |||||||||||||||||||| Sbjct: 1265190 tcgtcgccgacgccggaagc 1265209
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 338 ccttcgtcgacaatgagttc 357 |||||||||||||||||||| Sbjct: 4378415 ccttcgtcgacaatgagttc 4378434
>ref|XM_308028.2| Anopheles gambiae str. PEST ENSANGP00000019400 (ENSANGG00000016911), partial mRNA Length = 204 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 458 ggacacgctgtacgtgtgcg 477 |||||||||||||||||||| Sbjct: 102 ggacacgctgtacgtgtgcg 121
>gb|CP000100.1| Synechococcus elongatus PCC 7942, complete genome Length = 2695903 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 155 tcgtcgccgacgccggaagc 174 |||||||||||||||||||| Sbjct: 355692 tcgtcgccgacgccggaagc 355673 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,796,461 Number of Sequences: 3902068 Number of extensions: 2796461 Number of successful extensions: 53363 Number of sequences better than 10.0: 24 Number of HSP's better than 10.0 without gapping: 26 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 53067 Number of HSP's gapped (non-prelim): 291 length of query: 488 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 466 effective length of database: 17,147,199,772 effective search space: 7990595093752 effective search space used: 7990595093752 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)