ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast79d04
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|XM_470902.1| Oryza sativa (japonica cultivar-group), mRNA 107 3e-20
2gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 107 3e-20
3gb|AC118134.3| Oryza sativa chromosome 3 BAC OSJNBb0041J20 genom... 107 3e-20
4dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 107 3e-20
5dbj|AK111515.1| Oryza sativa (japonica cultivar-group) cDNA clon... 107 3e-20
6gb|AC145491.1| Genomic sequence for Oryza sativa, Nipponbare str... 76 1e-10
7gb|AC118340.1| Genomic sequence for Oryza sativa, Nipponbare str... 76 1e-10
8dbj|AK102644.1| Oryza sativa (japonica cultivar-group) cDNA clon... 76 1e-10
9dbj|AK065474.1| Oryza sativa (japonica cultivar-group) cDNA clon... 76 1e-10
10dbj|AK061751.1| Oryza sativa (japonica cultivar-group) cDNA clon... 76 1e-10
11ref|XM_369967.1| Magnaporthe grisea 70-15 hypothetical protein (... 42 1.7
12gb|AF525688.1| Magnaporthe grisea MAP kinase kinase (mkk1) gene,... 42 1.7
13dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.7
14dbj|AK110931.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.7
15gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 42 1.7
16emb|AL928747.3|CNS08CBK Oryza sativa chromosome 12, . BAC OSJNBa... 42 1.7
17gb|AC165313.7| Mus musculus chromosome 5, clone RP24-294J23, com... 40 6.6
18gb|AC165335.3| Mus musculus BAC clone RP24-481H19 from chromosom... 40 6.6
19gb|AC110538.6| Mus musculus chromosome 5, clone RP23-71L23, comp... 40 6.6
20gb|AC160551.4| Mus musculus chromosome 5, clone RP23-296C20, com... 40 6.6
21dbj|AP008231.1| Synechococcus elongatus PCC 6301 DNA, complete g... 40 6.6
22gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 40 6.6
23ref|XM_308028.2| Anopheles gambiae str. PEST ENSANGP00000019400 ... 40 6.6
24gb|CP000100.1| Synechococcus elongatus PCC 7942, complete genome 40 6.6

>ref|XM_470902.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2235

 Score =  107 bits (54), Expect = 3e-20
 Identities = 146/177 (82%)
 Strand = Plus / Plus

                                                                        
Query: 274  gacgtgggattgttcagagtgtcgggtgtgttcccaaccatttccaaggatggcgccaag 333
            |||||||| |||||||| ||||| || |||| ||| ||||| |||||||| ||| |||||
Sbjct: 1174 gacgtggggttgttcagggtgtccggcgtgtgcccgaccatctccaaggacggctccaag 1233

                                                                        
Query: 334  cttgccttcgtcgacaatgagttcaaggctgtatggcttgccgatacccaaggcttgcgc 393
            || || ||||| ||||| ||||||||||| || ||||| ||||| | ||| ||| |||||
Sbjct: 1234 ctcgcgttcgtggacaacgagttcaaggcggtgtggctcgccgacagccatggcctgcgc 1293

                                                                     
Query: 394  gtcgtctacgagaagcggngctccaacgccgtcttctcgacggcgtggaaccagaac 450
            || || |||||||||  | |  |||||  ||| ||||| ||||||||||||||||||
Sbjct: 1294 gtggtgtacgagaagaaggggcccaacagcgtgttctccacggcgtggaaccagaac 1350



 Score = 89.7 bits (45), Expect = 8e-15
 Identities = 114/137 (83%)
 Strand = Plus / Plus

                                                                        
Query: 52   gaggcgcagtaccgtcacatcgagatcttcgacgtctcctcgccggaccagcccatgcag 111
            |||| ||||||||| ||||||||||||||||||||  |||||||||| |||||  || ||
Sbjct: 946  gaggagcagtaccggcacatcgagatcttcgacgtggcctcgccggagcagccggtgaag 1005

                                                                        
Query: 112  atcagccagaaaatcagacccaagggcgaccactacaaccctttcgtcgccgacgccgga 171
            ||||  ||||| |  || ||||||  |||||||| |||||| ||||||  ||||| ||| 
Sbjct: 1006 atcacgcagaagactaggcccaagaccgaccacttcaaccccttcgtcctcgacggcggc 1065

                             
Query: 172  agccgcatcggctacca 188
            ||||||||||| |||||
Sbjct: 1066 agccgcatcgggtacca 1082



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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  107 bits (54), Expect = 3e-20
 Identities = 146/177 (82%)
 Strand = Plus / Plus

                                                                            
Query: 274      gacgtgggattgttcagagtgtcgggtgtgttcccaaccatttccaaggatggcgccaag 333
                |||||||| |||||||| ||||| || |||| ||| ||||| |||||||| ||| |||||
Sbjct: 16264828 gacgtggggttgttcagggtgtccggcgtgtgcccgaccatctccaaggacggctccaag 16264887

                                                                            
Query: 334      cttgccttcgtcgacaatgagttcaaggctgtatggcttgccgatacccaaggcttgcgc 393
                || || ||||| ||||| ||||||||||| || ||||| ||||| | ||| ||| |||||
Sbjct: 16264888 ctcgcgttcgtggacaacgagttcaaggcggtgtggctcgccgacagccatggcctgcgc 16264947

                                                                         
Query: 394      gtcgtctacgagaagcggngctccaacgccgtcttctcgacggcgtggaaccagaac 450
                || || |||||||||  | |  |||||  ||| ||||| ||||||||||||||||||
Sbjct: 16264948 gtggtgtacgagaagaaggggcccaacagcgtgttctccacggcgtggaaccagaac 16265004



 Score = 89.7 bits (45), Expect = 8e-15
 Identities = 114/137 (83%)
 Strand = Plus / Plus

                                                                            
Query: 52       gaggcgcagtaccgtcacatcgagatcttcgacgtctcctcgccggaccagcccatgcag 111
                |||| ||||||||| ||||||||||||||||||||  |||||||||| |||||  || ||
Sbjct: 16264600 gaggagcagtaccggcacatcgagatcttcgacgtggcctcgccggagcagccggtgaag 16264659

                                                                            
Query: 112      atcagccagaaaatcagacccaagggcgaccactacaaccctttcgtcgccgacgccgga 171
                ||||  ||||| |  || ||||||  |||||||| |||||| ||||||  ||||| ||| 
Sbjct: 16264660 atcacgcagaagactaggcccaagaccgaccacttcaaccccttcgtcctcgacggcggc 16264719

                                 
Query: 172      agccgcatcggctacca 188
                ||||||||||| |||||
Sbjct: 16264720 agccgcatcgggtacca 16264736



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 122/150 (81%)
 Strand = Plus / Plus

                                                                            
Query: 251      acaagatgcactccccacacacagacgtgggattgttcagagtgtcgggtgtgttcccaa 310
                ||||| |||| |||||||||  ||| || ||  ||||||| ||||| |||||||||||||
Sbjct: 11241711 acaagctgcaatccccacacgaagatgtcggtgtgttcagggtgtccggtgtgttcccaa 11241770

                                                                            
Query: 311      ccatttccaaggatggcgccaagcttgccttcgtcgacaatgagttcaaggctgtatggc 370
                |  ||||||| |||||  |  ||||||||||||| ||||| ||||||||  | || ||||
Sbjct: 11241771 cattttccaaagatggttctcagcttgccttcgttgacaacgagttcaaatccgtgtggc 11241830

                                              
Query: 371      ttgccgatacccaaggcttgcgcgtcgtct 400
                | ||||||| ||||||  |||| |||||||
Sbjct: 11241831 tggccgatagccaagggatgcgtgtcgtct 11241860



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>gb|AC118134.3| Oryza sativa chromosome 3 BAC OSJNBb0041J20 genomic sequence, complete
             sequence
          Length = 135585

 Score =  107 bits (54), Expect = 3e-20
 Identities = 146/177 (82%)
 Strand = Plus / Plus

                                                                         
Query: 274   gacgtgggattgttcagagtgtcgggtgtgttcccaaccatttccaaggatggcgccaag 333
             |||||||| |||||||| ||||| || |||| ||| ||||| |||||||| ||| |||||
Sbjct: 62844 gacgtggggttgttcagggtgtccggcgtgtgcccgaccatctccaaggacggctccaag 62903

                                                                         
Query: 334   cttgccttcgtcgacaatgagttcaaggctgtatggcttgccgatacccaaggcttgcgc 393
             || || ||||| ||||| ||||||||||| || ||||| ||||| | ||| ||| |||||
Sbjct: 62904 ctcgcgttcgtggacaacgagttcaaggcggtgtggctcgccgacagccatggcctgcgc 62963

                                                                      
Query: 394   gtcgtctacgagaagcggngctccaacgccgtcttctcgacggcgtggaaccagaac 450
             || || |||||||||  | |  |||||  ||| ||||| ||||||||||||||||||
Sbjct: 62964 gtggtgtacgagaagaaggggcccaacagcgtgttctccacggcgtggaaccagaac 63020



 Score = 89.7 bits (45), Expect = 8e-15
 Identities = 114/137 (83%)
 Strand = Plus / Plus

                                                                         
Query: 52    gaggcgcagtaccgtcacatcgagatcttcgacgtctcctcgccggaccagcccatgcag 111
             |||| ||||||||| ||||||||||||||||||||  |||||||||| |||||  || ||
Sbjct: 62616 gaggagcagtaccggcacatcgagatcttcgacgtggcctcgccggagcagccggtgaag 62675

                                                                         
Query: 112   atcagccagaaaatcagacccaagggcgaccactacaaccctttcgtcgccgacgccgga 171
             ||||  ||||| |  || ||||||  |||||||| |||||| ||||||  ||||| ||| 
Sbjct: 62676 atcacgcagaagactaggcccaagaccgaccacttcaaccccttcgtcctcgacggcggc 62735

                              
Query: 172   agccgcatcggctacca 188
             ||||||||||| |||||
Sbjct: 62736 agccgcatcgggtacca 62752



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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  107 bits (54), Expect = 3e-20
 Identities = 146/177 (82%)
 Strand = Plus / Plus

                                                                            
Query: 274      gacgtgggattgttcagagtgtcgggtgtgttcccaaccatttccaaggatggcgccaag 333
                |||||||| |||||||| ||||| || |||| ||| ||||| |||||||| ||| |||||
Sbjct: 16258461 gacgtggggttgttcagggtgtccggcgtgtgcccgaccatctccaaggacggctccaag 16258520

                                                                            
Query: 334      cttgccttcgtcgacaatgagttcaaggctgtatggcttgccgatacccaaggcttgcgc 393
                || || ||||| ||||| ||||||||||| || ||||| ||||| | ||| ||| |||||
Sbjct: 16258521 ctcgcgttcgtggacaacgagttcaaggcggtgtggctcgccgacagccatggcctgcgc 16258580

                                                                         
Query: 394      gtcgtctacgagaagcggngctccaacgccgtcttctcgacggcgtggaaccagaac 450
                || || |||||||||  | |  |||||  ||| ||||| ||||||||||||||||||
Sbjct: 16258581 gtggtgtacgagaagaaggggcccaacagcgtgttctccacggcgtggaaccagaac 16258637



 Score = 89.7 bits (45), Expect = 8e-15
 Identities = 114/137 (83%)
 Strand = Plus / Plus

                                                                            
Query: 52       gaggcgcagtaccgtcacatcgagatcttcgacgtctcctcgccggaccagcccatgcag 111
                |||| ||||||||| ||||||||||||||||||||  |||||||||| |||||  || ||
Sbjct: 16258233 gaggagcagtaccggcacatcgagatcttcgacgtggcctcgccggagcagccggtgaag 16258292

                                                                            
Query: 112      atcagccagaaaatcagacccaagggcgaccactacaaccctttcgtcgccgacgccgga 171
                ||||  ||||| |  || ||||||  |||||||| |||||| ||||||  ||||| ||| 
Sbjct: 16258293 atcacgcagaagactaggcccaagaccgaccacttcaaccccttcgtcctcgacggcggc 16258352

                                 
Query: 172      agccgcatcggctacca 188
                ||||||||||| |||||
Sbjct: 16258353 agccgcatcgggtacca 16258369



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 122/150 (81%)
 Strand = Plus / Plus

                                                                            
Query: 251      acaagatgcactccccacacacagacgtgggattgttcagagtgtcgggtgtgttcccaa 310
                ||||| |||| |||||||||  ||| || ||  ||||||| ||||| |||||||||||||
Sbjct: 11238474 acaagctgcaatccccacacgaagatgtcggtgtgttcagggtgtccggtgtgttcccaa 11238533

                                                                            
Query: 311      ccatttccaaggatggcgccaagcttgccttcgtcgacaatgagttcaaggctgtatggc 370
                |  ||||||| |||||  |  ||||||||||||| ||||| ||||||||  | || ||||
Sbjct: 11238534 cattttccaaagatggttctcagcttgccttcgttgacaacgagttcaaatccgtgtggc 11238593

                                              
Query: 371      ttgccgatacccaaggcttgcgcgtcgtct 400
                | ||||||| ||||||  |||| |||||||
Sbjct: 11238594 tggccgatagccaagggatgcgtgtcgtct 11238623



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>dbj|AK111515.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002E06, full
            insert sequence
          Length = 2363

 Score =  107 bits (54), Expect = 3e-20
 Identities = 146/177 (82%)
 Strand = Plus / Plus

                                                                        
Query: 274  gacgtgggattgttcagagtgtcgggtgtgttcccaaccatttccaaggatggcgccaag 333
            |||||||| |||||||| ||||| || |||| ||| ||||| |||||||| ||| |||||
Sbjct: 1239 gacgtggggttgttcagggtgtccggcgtgtgcccgaccatctccaaggacggctccaag 1298

                                                                        
Query: 334  cttgccttcgtcgacaatgagttcaaggctgtatggcttgccgatacccaaggcttgcgc 393
            || || ||||| ||||| ||||||||||| || ||||| ||||| | ||| ||| |||||
Sbjct: 1299 ctcgcgttcgtggacaacgagttcaaggcggtgtggctcgccgacagccatggcctgcgc 1358

                                                                     
Query: 394  gtcgtctacgagaagcggngctccaacgccgtcttctcgacggcgtggaaccagaac 450
            || || |||||||||  | |  |||||  ||| ||||| ||||||||||||||||||
Sbjct: 1359 gtggtgtacgagaagaaggggcccaacagcgtgttctccacggcgtggaaccagaac 1415



 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 115/137 (83%)
 Strand = Plus / Plus

                                                                        
Query: 52   gaggcgcagtaccgtcacatcgagatcttcgacgtctcctcgccggaccagcccatgcag 111
            |||| ||||||||| ||||||||||||||||||||  |||||||||| |||||  || ||
Sbjct: 1011 gaggagcagtaccggcacatcgagatcttcgacgtggcctcgccggagcagccggtgaag 1070

                                                                        
Query: 112  atcagccagaaaatcagacccaagggcgaccactacaaccctttcgtcgccgacgccgga 171
            ||||  ||||| |  || ||||||| |||||||| |||||| ||||||  ||||| ||| 
Sbjct: 1071 atcacgcagaagactaggcccaaggccgaccacttcaaccccttcgtcctcgacggcggc 1130

                             
Query: 172  agccgcatcggctacca 188
            ||||||||||| |||||
Sbjct: 1131 agccgcatcgggtacca 1147



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>gb|AC145491.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNAb0085H08, from chromosome 3, complete sequence
          Length = 130656

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 122/150 (81%)
 Strand = Plus / Plus

                                                                         
Query: 251   acaagatgcactccccacacacagacgtgggattgttcagagtgtcgggtgtgttcccaa 310
             ||||| |||| |||||||||  ||| || ||  ||||||| ||||| |||||||||||||
Sbjct: 20664 acaagctgcaatccccacacgaagatgtcggtgtgttcagggtgtccggtgtgttcccaa 20723

                                                                         
Query: 311   ccatttccaaggatggcgccaagcttgccttcgtcgacaatgagttcaaggctgtatggc 370
             |  ||||||| |||||  |  ||||||||||||| ||||| ||||||||  | || ||||
Sbjct: 20724 cattttccaaagatggttctcagcttgccttcgttgacaacgagttcaaatccgtgtggc 20783

                                           
Query: 371   ttgccgatacccaaggcttgcgcgtcgtct 400
             | ||||||| ||||||  |||| |||||||
Sbjct: 20784 tggccgatagccaagggatgcgtgtcgtct 20813



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>gb|AC118340.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBb0085H08, from chromosome 3, complete sequence
          Length = 126708

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 122/150 (81%)
 Strand = Plus / Minus

                                                                         
Query: 251   acaagatgcactccccacacacagacgtgggattgttcagagtgtcgggtgtgttcccaa 310
             ||||| |||| |||||||||  ||| || ||  ||||||| ||||| |||||||||||||
Sbjct: 39337 acaagctgcaatccccacacgaagatgtcggtgtgttcagggtgtccggtgtgttcccaa 39278

                                                                         
Query: 311   ccatttccaaggatggcgccaagcttgccttcgtcgacaatgagttcaaggctgtatggc 370
             |  ||||||| |||||  |  ||||||||||||| ||||| ||||||||  | || ||||
Sbjct: 39277 cattttccaaagatggttctcagcttgccttcgttgacaacgagttcaaatccgtgtggc 39218

                                           
Query: 371   ttgccgatacccaaggcttgcgcgtcgtct 400
             | ||||||| ||||||  |||| |||||||
Sbjct: 39217 tggccgatagccaagggatgcgtgtcgtct 39188



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>dbj|AK102644.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033100G21, full
            insert sequence
          Length = 2495

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 122/150 (81%)
 Strand = Plus / Plus

                                                                        
Query: 251  acaagatgcactccccacacacagacgtgggattgttcagagtgtcgggtgtgttcccaa 310
            ||||| |||| |||||||||  ||| || ||  ||||||| ||||| |||||||||||||
Sbjct: 1210 acaagctgcaatccccacacgaagatgtcggtgtgttcagggtgtccggtgtgttcccaa 1269

                                                                        
Query: 311  ccatttccaaggatggcgccaagcttgccttcgtcgacaatgagttcaaggctgtatggc 370
            |  ||||||| |||||  |  ||||||||||||| ||||| ||||||||  | || ||||
Sbjct: 1270 cattttccaaagatggttctcagcttgccttcgttgacaacgagttcaaatccgtgtggc 1329

                                          
Query: 371  ttgccgatacccaaggcttgcgcgtcgtct 400
            | ||||||| ||||||  |||| |||||||
Sbjct: 1330 tggccgatagccaagggatgcgtgtcgtct 1359



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>dbj|AK065474.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013023F11, full
            insert sequence
          Length = 2495

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 122/150 (81%)
 Strand = Plus / Plus

                                                                        
Query: 251  acaagatgcactccccacacacagacgtgggattgttcagagtgtcgggtgtgttcccaa 310
            ||||| |||| |||||||||  ||| || ||  ||||||| ||||| |||||||||||||
Sbjct: 1210 acaagctgcaatccccacacgaagatgtcggtgtgttcagggtgtccggtgtgttcccaa 1269

                                                                        
Query: 311  ccatttccaaggatggcgccaagcttgccttcgtcgacaatgagttcaaggctgtatggc 370
            |  ||||||| |||||  |  ||||||||||||| ||||| ||||||||  | || ||||
Sbjct: 1270 cattttccaaagatggttctcagcttgccttcgttgacaacgagttcaaatccgtgtggc 1329

                                          
Query: 371  ttgccgatacccaaggcttgcgcgtcgtct 400
            | ||||||| ||||||  |||| |||||||
Sbjct: 1330 tggccgatagccaagggatgcgtgtcgtct 1359



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>dbj|AK061751.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-G10, full
           insert sequence
          Length = 1763

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 122/150 (81%)
 Strand = Plus / Plus

                                                                       
Query: 251 acaagatgcactccccacacacagacgtgggattgttcagagtgtcgggtgtgttcccaa 310
           ||||| |||| |||||||||  ||| || ||  ||||||| ||||| |||||||||||||
Sbjct: 530 acaagctgcaatccccacacgaagatgtcggtgtgttcagggtgtccggtgtgttcccaa 589

                                                                       
Query: 311 ccatttccaaggatggcgccaagcttgccttcgtcgacaatgagttcaaggctgtatggc 370
           |  ||||||| |||||  |  ||||||||||||| ||||| ||||||||  | || ||||
Sbjct: 590 cattttccaaagatggttctcagcttgccttcgttgacaacgagttcaaatccgtgtggc 649

                                         
Query: 371 ttgccgatacccaaggcttgcgcgtcgtct 400
           | ||||||| ||||||  |||| |||||||
Sbjct: 650 tggccgatagccaagggatgcgtgtcgtct 679



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>ref|XM_369967.1| Magnaporthe grisea 70-15 hypothetical protein (MG06482.4) partial
           mRNA
          Length = 1548

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 67  cacatcgagatcttcgacgtc 87
           |||||||||||||||||||||
Sbjct: 609 cacatcgagatcttcgacgtc 589



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>gb|AF525688.1| Magnaporthe grisea MAP kinase kinase (mkk1) gene, complete cds
          Length = 2500

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 67   cacatcgagatcttcgacgtc 87
            |||||||||||||||||||||
Sbjct: 1073 cacatcgagatcttcgacgtc 1053



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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                             
Query: 56       cgcagtaccgtcacatcgagatcttcgac 84
                |||||||| | ||||||||||||||||||
Sbjct: 13931474 cgcagtacaggcacatcgagatcttcgac 13931446



 Score = 40.1 bits (20), Expect = 6.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                            
Query: 423      cgtcttctcgacggcgtggaaccagaac 450
                ||||||||| ||| ||||||||||||||
Sbjct: 13931089 cgtcttctccacgtcgtggaaccagaac 13931062



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>dbj|AK110931.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-173-F10, full
            insert sequence
          Length = 2745

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                         
Query: 56   cgcagtaccgtcacatcgagatcttcgac 84
            |||||||| | ||||||||||||||||||
Sbjct: 1066 cgcagtacaggcacatcgagatcttcgac 1094



 Score = 40.1 bits (20), Expect = 6.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 423  cgtcttctcgacggcgtggaaccagaac 450
            ||||||||| ||| ||||||||||||||
Sbjct: 1451 cgtcttctccacgtcgtggaaccagaac 1478



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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                             
Query: 56       cgcagtaccgtcacatcgagatcttcgac 84
                |||||||| | ||||||||||||||||||
Sbjct: 13885754 cgcagtacaggcacatcgagatcttcgac 13885726



 Score = 40.1 bits (20), Expect = 6.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                            
Query: 423      cgtcttctcgacggcgtggaaccagaac 450
                ||||||||| ||| ||||||||||||||
Sbjct: 13885369 cgtcttctccacgtcgtggaaccagaac 13885342



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>emb|AL928747.3|CNS08CBK Oryza sativa chromosome 12, . BAC OSJNBa0017A21 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 144552

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 56    cgcagtaccgtcacatcgagatcttcgac 84
             |||||||| | ||||||||||||||||||
Sbjct: 68102 cgcagtacaggcacatcgagatcttcgac 68074



 Score = 40.1 bits (20), Expect = 6.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 423   cgtcttctcgacggcgtggaaccagaac 450
             ||||||||| ||| ||||||||||||||
Sbjct: 67717 cgtcttctccacgtcgtggaaccagaac 67690



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>gb|AC165313.7| Mus musculus chromosome 5, clone RP24-294J23, complete sequence
          Length = 137597

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 346    gacaatgagttcaaggctgt 365
              ||||||||||||||||||||
Sbjct: 130764 gacaatgagttcaaggctgt 130783



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>gb|AC165335.3| Mus musculus BAC clone RP24-481H19 from chromosome 5, complete sequence
          Length = 212783

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 346   gacaatgagttcaaggctgt 365
             ||||||||||||||||||||
Sbjct: 30400 gacaatgagttcaaggctgt 30381



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>gb|AC110538.6| Mus musculus chromosome 5, clone RP23-71L23, complete sequence
          Length = 205923

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 346  gacaatgagttcaaggctgt 365
            ||||||||||||||||||||
Sbjct: 6576 gacaatgagttcaaggctgt 6595



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>gb|AC160551.4| Mus musculus chromosome 5, clone RP23-296C20, complete sequence
          Length = 173331

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 346   gacaatgagttcaaggctgt 365
             ||||||||||||||||||||
Sbjct: 84727 gacaatgagttcaaggctgt 84746



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>dbj|AP008231.1| Synechococcus elongatus PCC 6301 DNA, complete genome
          Length = 2696255

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 155     tcgtcgccgacgccggaagc 174
               ||||||||||||||||||||
Sbjct: 1265190 tcgtcgccgacgccggaagc 1265209



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>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 338     ccttcgtcgacaatgagttc 357
               ||||||||||||||||||||
Sbjct: 4378415 ccttcgtcgacaatgagttc 4378434



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>ref|XM_308028.2| Anopheles gambiae str. PEST ENSANGP00000019400
           (ENSANGG00000016911), partial mRNA
          Length = 204

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 458 ggacacgctgtacgtgtgcg 477
           ||||||||||||||||||||
Sbjct: 102 ggacacgctgtacgtgtgcg 121



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>gb|CP000100.1| Synechococcus elongatus PCC 7942, complete genome
          Length = 2695903

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 155    tcgtcgccgacgccggaagc 174
              ||||||||||||||||||||
Sbjct: 355692 tcgtcgccgacgccggaagc 355673


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,796,461
Number of Sequences: 3902068
Number of extensions: 2796461
Number of successful extensions: 53363
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 53067
Number of HSP's gapped (non-prelim): 291
length of query: 488
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 466
effective length of database: 17,147,199,772
effective search space: 7990595093752
effective search space used: 7990595093752
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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