| Clone Name | bast79d03 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | CALX_PEA (O82709) Calnexin homolog precursor | 27 | 7.2 | 2 | RBP1A_XENLA (Q9PT60) RalA-binding protein 1-A (RalBP1-A) (Ral-in... | 28 | 9.7 |
|---|
>CALX_PEA (O82709) Calnexin homolog precursor| Length = 551 Score = 26.6 bits (57), Expect(2) = 7.2 Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 1/42 (2%) Frame = -3 Query: 471 WMXRRRPVEPGA-EPADLDLDLPRVRVQEELHQPGVRLRYHP 349 W R + +P A +P D D D PR + EE +P L + P Sbjct: 244 WDERAKIPDPEAVKPEDWDEDAPREIIDEEAEKPEPWLDHEP 285 Score = 20.8 bits (42), Expect(2) = 7.2 Identities = 7/14 (50%), Positives = 10/14 (71%) Frame = -1 Query: 233 PGCGGARMPSGSHP 192 PGCG + P+ S+P Sbjct: 319 PGCGEWKRPTKSNP 332
>RBP1A_XENLA (Q9PT60) RalA-binding protein 1-A (RalBP1-A) (Ral-interacting| protein 1-A) (XRLIP2) (XRLIP76-A) (RIP1-A) Length = 654 Score = 28.5 bits (62), Expect = 9.7 Identities = 9/28 (32%), Positives = 18/28 (64%) Frame = -3 Query: 480 ISRWMXRRRPVEPGAEPADLDLDLPRVR 397 + +W +++ +P EP L +D+PR+R Sbjct: 154 VKQWKEKKKKKKPTPEPESLPVDIPRLR 181 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 29,320,113 Number of Sequences: 219361 Number of extensions: 278409 Number of successful extensions: 967 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 949 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 967 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3304846491 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)