ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast79d02
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1MEGL_PSEPU (P13254) Methionine gamma-lyase (EC 4.4.1.11) (L-meth... 45 8e-05
2METZ_PSEAE (P55218) O-succinylhomoserine sulfhydrylase (EC 2.5.1... 44 2e-04
3MET17_KLULA (Q92441) Protein MET17 [Includes: O-acetylhomoserine... 39 0.010
4CYSD_SCHPO (O13326) O-acetylhomoserine (thiol)-lyase (EC 2.5.1.4... 36 0.062
5METB_HELPJ (Q9ZMW7) Cystathionine gamma-synthase (EC 2.5.1.48) (... 35 0.081
6METC_ARATH (P53780) Cystathionine beta-lyase, chloroplast precur... 35 0.11
7MET17_YEAST (P06106) Protein MET17 [Includes: O-acetylhomoserine... 35 0.14
8METB_ECOLI (P00935) Cystathionine gamma-synthase (EC 2.5.1.48) (... 35 0.14
9METB_HELPY (P56069) Cystathionine gamma-synthase (EC 2.5.1.48) (... 33 0.31
10CYSD_EMENI (P50125) O-acetylhomoserine (thiol)-lyase (EC 2.5.1.4... 33 0.31
11METB_ARATH (P55217) Cystathionine gamma-synthase, chloroplast pr... 33 0.40
12CGL_RAT (P18757) Cystathionine gamma-lyase (EC 4.4.1.1) (Gamma-c... 31 2.0
13UL56_HHV11 (P10240) Protein UL56 30 3.4
14METB_MYCTU (P66875) Cystathionine gamma-synthase (EC 2.5.1.48) (... 30 4.4
15METB_MYCBO (P66876) Cystathionine gamma-synthase (EC 2.5.1.48) (... 30 4.4
16FTHS_STAAW (Q8NW37) Formate--tetrahydrofolate ligase (EC 6.3.4.3... 30 4.4
17FTHS_STAAS (Q6G8J5) Formate--tetrahydrofolate ligase (EC 6.3.4.3... 30 4.4
18FTHS_STAAR (Q6GFX6) Formate--tetrahydrofolate ligase (EC 6.3.4.3... 30 4.4
19CGL_MOUSE (Q8VCN5) Cystathionine gamma-lyase (EC 4.4.1.1) (Gamma... 29 5.8
20SEMG1_HUMAN (P04279) Semenogelin-1 precursor (Semenogelin I) (SG... 29 5.8
21LEU3_SYMTH (Q67JY2) 3-isopropylmalate dehydrogenase (EC 1.1.1.85... 29 5.8
22METB_HERAU (P24601) Probable cystathionine gamma-synthase (EC 2.... 29 7.6
23ACON_MYCAV (O08451) Aconitate hydratase (EC 4.2.1.3) (Citrate hy... 29 7.6
24RS16_RHILO (Q98E70) 30S ribosomal protein S16 29 7.6
25FTHS_STAES (Q8CNV9) Formate--tetrahydrofolate ligase (EC 6.3.4.3... 28 9.9
26FTHS_STAEQ (Q5HNH4) Formate--tetrahydrofolate ligase (EC 6.3.4.3... 28 9.9
27CGL_MACFA (Q60HG7) Cystathionine gamma-lyase (EC 4.4.1.1) (Gamma... 28 9.9
28METC_LACLC (P0A4K3) Cystathionine beta-lyase (EC 4.4.1.8) (CBL) ... 28 9.9
29METC_LACLA (P0A4K2) Cystathionine beta-lyase (EC 4.4.1.8) (CBL) ... 28 9.9
30ATR_KLULA (Q6CT34) Serine/threonine-protein kinase MEC1 (EC 2.7.... 28 9.9
31RS16_RHIME (Q92L43) 30S ribosomal protein S16 28 9.9

>MEGL_PSEPU (P13254) Methionine gamma-lyase (EC 4.4.1.11) (L-methioninase)|
          Length = 398

 Score = 45.4 bits (106), Expect = 8e-05
 Identities = 34/93 (36%), Positives = 45/93 (48%), Gaps = 3/93 (3%)
 Frame = +2

Query: 203 PAAALAAARHEFG--EHGGVNMS-IEASATFTVMEPDTMRRLFTGELGPERGDLYIYSRH 373
           P  A  A  H +   +HGG  +  +  +ATFT    +     F GE        + YSR 
Sbjct: 8   PGFATRAIHHGYDPQDHGGALVPPVYQTATFTFPTVEYGAACFAGEQAG-----HFYSRI 62

Query: 374 FNPTVLALGRQMAALEGTEAAYCTAXGMSAISS 472
            NPT+  L  +MA+LEG EA    A GM AI+S
Sbjct: 63  SNPTLNLLEARMASLEGGEAGLALASGMGAITS 95



to top

>METZ_PSEAE (P55218) O-succinylhomoserine sulfhydrylase (EC 2.5.1.-) (OSH|
           sulfhydrylase)
          Length = 403

 Score = 43.9 bits (102), Expect = 2e-04
 Identities = 31/76 (40%), Positives = 38/76 (50%)
 Frame = +2

Query: 239 GEHGGVNMSIEASATFTVMEPDTMRRLFTGELGPERGDLYIYSRHFNPTVLALGRQMAAL 418
           GEHG   +   +S  F        R  F GE+        +YSR+ NPTV     ++AAL
Sbjct: 34  GEHGEA-LFTTSSYVFRTAADAAAR--FAGEVPGN-----VYSRYTNPTVRTFEERIAAL 85

Query: 419 EGTEAAYCTAXGMSAI 466
           EG E A  TA GMSAI
Sbjct: 86  EGAEQAVATASGMSAI 101



to top

>MET17_KLULA (Q92441) Protein MET17 [Includes: O-acetylhomoserine sulfhydrylase|
           (EC 2.5.1.49) (OAH sulfhydrylase) (Homocysteine
           synthase); O-acetylserine sulfhydrylase (EC 2.5.1.47)
           (OAS sulfhydrylase)]
          Length = 443

 Score = 38.5 bits (88), Expect = 0.010
 Identities = 19/36 (52%), Positives = 25/36 (69%)
 Frame = +2

Query: 356 YIYSRHFNPTVLALGRQMAALEGTEAAYCTAXGMSA 463
           YIYSR  NPT+  L +++AALEG  AA  T+ G +A
Sbjct: 52  YIYSRIMNPTLDVLEKRLAALEGGIAALATSSGQAA 87



to top

>CYSD_SCHPO (O13326) O-acetylhomoserine (thiol)-lyase (EC 2.5.1.49)|
           (O-acetylhomoserine sulfhydrylase) (OAH sulfhydrylase)
           (Homocysteine synthase)
          Length = 429

 Score = 35.8 bits (81), Expect = 0.062
 Identities = 18/37 (48%), Positives = 23/37 (62%)
 Frame = +2

Query: 356 YIYSRHFNPTVLALGRQMAALEGTEAAYCTAXGMSAI 466
           YIYSR  NPT     +++AALE   AA  T+ G SA+
Sbjct: 55  YIYSRMMNPTADVFEKRIAALEHGAAAIATSSGTSAL 91



to top

>METB_HELPJ (Q9ZMW7) Cystathionine gamma-synthase (EC 2.5.1.48) (CGS)|
           (O-succinylhomoserine (thiol)-lyase)
          Length = 380

 Score = 35.4 bits (80), Expect = 0.081
 Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
 Frame = +2

Query: 245 HGGVNMSIEASA-TFTVMEPDTMRRLFTGELGPERGDLYIYSRHFNPTVLALGRQMAALE 421
           HGG+N      A +  + +  T R+     +G  +G  Y YSR  NPT  AL   +A LE
Sbjct: 9   HGGINEDATTGAVSVPIYQTSTYRQ---DAIGRHKG--YEYSRSGNPTRFALEELIADLE 63

Query: 422 GTEAAYCTAXGMSAI 466
           G    +  A G++ I
Sbjct: 64  GGVKGFAFASGLAGI 78



to top

>METC_ARATH (P53780) Cystathionine beta-lyase, chloroplast precursor (EC|
           4.4.1.8) (CBL) (Beta-cystathionase) (Cysteine lyase)
          Length = 464

 Score = 35.0 bits (79), Expect = 0.11
 Identities = 28/107 (26%), Positives = 49/107 (45%)
 Frame = +2

Query: 152 NGSTEEKALKARRRESDPAAALAAARHEFGEHGGVNMSIEASATFTVMEPDTMRRLFTGE 331
           N +T+       + E+  +  L    ++F     ++  +  +ATF   +P  +      E
Sbjct: 70  NNTTDSLNTMNIKEEASVSTLLVNLDNKFDPFDAMSTPLYQTATFK--QPSAI------E 121

Query: 332 LGPERGDLYIYSRHFNPTVLALGRQMAALEGTEAAYCTAXGMSAISS 472
            GP     Y Y+R  NPT  AL   +A L+  + A+C   GM+A+S+
Sbjct: 122 NGP-----YDYTRSGNPTRDALESLLAKLDKADRAFCFTSGMAALSA 163



to top

>MET17_YEAST (P06106) Protein MET17 [Includes: O-acetylhomoserine sulfhydrylase|
           (EC 2.5.1.49) (OAH sulfhydrylase) (Homocysteine
           synthase); O-acetylserine sulfhydrylase (EC 2.5.1.47)
           (OAS sulfhydrylase)]
          Length = 443

 Score = 34.7 bits (78), Expect = 0.14
 Identities = 17/36 (47%), Positives = 22/36 (61%)
 Frame = +2

Query: 356 YIYSRHFNPTVLALGRQMAALEGTEAAYCTAXGMSA 463
           Y+YSR  NPT   L  ++AALEG  AA   + G +A
Sbjct: 53  YVYSRFQNPTSNVLEERIAALEGGAAALAVSSGQAA 88



to top

>METB_ECOLI (P00935) Cystathionine gamma-synthase (EC 2.5.1.48) (CGS)|
           (O-succinylhomoserine (thiol)-lyase)
          Length = 386

 Score = 34.7 bits (78), Expect = 0.14
 Identities = 29/85 (34%), Positives = 39/85 (45%)
 Frame = +2

Query: 212 ALAAARHEFGEHGGVNMSIEASATFTVMEPDTMRRLFTGELGPERGDLYIYSRHFNPTVL 391
           A+ +  ++  ++G V   I  S+T+           FTG   P   D   YSR  NPT  
Sbjct: 9   AVRSGLNDDEQYGCVVPPIHLSSTYN----------FTGFNEPRAHD---YSRRGNPTRD 55

Query: 392 ALGRQMAALEGTEAAYCTAXGMSAI 466
            + R +A LEG   A  T  GMSAI
Sbjct: 56  VVQRALAELEGGAGAVLTNTGMSAI 80



to top

>METB_HELPY (P56069) Cystathionine gamma-synthase (EC 2.5.1.48) (CGS)|
           (O-succinylhomoserine (thiol)-lyase)
          Length = 380

 Score = 33.5 bits (75), Expect = 0.31
 Identities = 24/75 (32%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
 Frame = +2

Query: 245 HGGVNMSIEASA-TFTVMEPDTMRRLFTGELGPERGDLYIYSRHFNPTVLALGRQMAALE 421
           HGG++      A +  + +  T R+     +G  +G  Y YSR  NPT  AL   +A LE
Sbjct: 9   HGGISEDATTGAVSVPIYQTSTYRQ---DAIGRHKG--YEYSRSGNPTRFALEELIADLE 63

Query: 422 GTEAAYCTAXGMSAI 466
           G    +  A G++ I
Sbjct: 64  GGVKGFAFASGLAGI 78



to top

>CYSD_EMENI (P50125) O-acetylhomoserine (thiol)-lyase (EC 2.5.1.49)|
           (O-acetylhomoserine sulfhydrylase) (OAH sulfhydrylase)
           (Homocysteine synthase)
          Length = 437

 Score = 33.5 bits (75), Expect = 0.31
 Identities = 17/35 (48%), Positives = 22/35 (62%)
 Frame = +2

Query: 359 IYSRHFNPTVLALGRQMAALEGTEAAYCTAXGMSA 463
           IYSR  NPTV    +++AALEG  AA   + G +A
Sbjct: 57  IYSRIMNPTVDVFEKRIAALEGGVAAVAASSGQAA 91



to top

>METB_ARATH (P55217) Cystathionine gamma-synthase, chloroplast precursor (EC|
           2.5.1.48) (CGS) (O-succinylhomoserine (thiol)-lyase)
          Length = 563

 Score = 33.1 bits (74), Expect = 0.40
 Identities = 16/41 (39%), Positives = 24/41 (58%)
 Frame = +2

Query: 341 ERGDLYIYSRHFNPTVLALGRQMAALEGTEAAYCTAXGMSA 463
           +R   + Y R+ NPT + L  +++ALEG E+    A GM A
Sbjct: 219 KRSVSFEYGRYGNPTTVVLEDKISALEGAESTLVMASGMCA 259



to top

>CGL_RAT (P18757) Cystathionine gamma-lyase (EC 4.4.1.1)|
           (Gamma-cystathionase) (Probasin-related antigen)
           (PRB-RA)
          Length = 398

 Score = 30.8 bits (68), Expect = 2.0
 Identities = 15/45 (33%), Positives = 26/45 (57%)
 Frame = +2

Query: 338 PERGDLYIYSRHFNPTVLALGRQMAALEGTEAAYCTAXGMSAISS 472
           P +   ++YSR  NPT   L + +AAL+G +     A G++A ++
Sbjct: 51  PGQSSGFVYSRSGNPTRNCLEKAVAALDGAKHCLTFARGLAATTT 95



to top

>UL56_HHV11 (P10240) Protein UL56|
          Length = 197

 Score = 30.0 bits (66), Expect = 3.4
 Identities = 21/70 (30%), Positives = 30/70 (42%)
 Frame = +2

Query: 119 PTPQNDGFGDDNGSTEEKALKARRRESDPAAALAAARHEFGEHGGVNMSIEASATFTVME 298
           PT   +G   + G + + A +A RR +   A   A R  FG  G +   +    T  V  
Sbjct: 64  PTSSGEGEASERGRSRQAAQRAARR-ARRRAERRAQRRSFGPGGLLATPLFLPETRLVAP 122

Query: 299 PDTMRRLFTG 328
           PD  R L +G
Sbjct: 123 PDITRDLLSG 132



to top

>METB_MYCTU (P66875) Cystathionine gamma-synthase (EC 2.5.1.48) (CGS)|
           (O-succinylhomoserine (thiol)-lyase)
          Length = 388

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 25/72 (34%), Positives = 34/72 (47%)
 Frame = +2

Query: 248 GGVNMSIEASATFTVMEPDTMRRLFTGELGPERGDLYIYSRHFNPTVLALGRQMAALEGT 427
           G VN+ I AS+TF               +G  RG  + Y+R  NPT  AL   +AA+E  
Sbjct: 30  GAVNVPIYASSTFA-----------QDGVGGLRGG-FEYARTGNPTRAALEASLAAVEEG 77

Query: 428 EAAYCTAXGMSA 463
             A   + GM+A
Sbjct: 78  AFARAFSSGMAA 89



to top

>METB_MYCBO (P66876) Cystathionine gamma-synthase (EC 2.5.1.48) (CGS)|
           (O-succinylhomoserine (thiol)-lyase)
          Length = 388

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 25/72 (34%), Positives = 34/72 (47%)
 Frame = +2

Query: 248 GGVNMSIEASATFTVMEPDTMRRLFTGELGPERGDLYIYSRHFNPTVLALGRQMAALEGT 427
           G VN+ I AS+TF               +G  RG  + Y+R  NPT  AL   +AA+E  
Sbjct: 30  GAVNVPIYASSTFA-----------QDGVGGLRGG-FEYARTGNPTRAALEASLAAVEEG 77

Query: 428 EAAYCTAXGMSA 463
             A   + GM+A
Sbjct: 78  AFARAFSSGMAA 89



to top

>FTHS_STAAW (Q8NW37) Formate--tetrahydrofolate ligase (EC 6.3.4.3)|
           (Formyltetrahydrofolate synthetase) (FHS) (FTHFS)
          Length = 555

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
 Frame = +2

Query: 137 GFGDDNGSTEEKALKARRRESDPAAALAAAR-HEFGEHGGV 256
           GFG D G+ +   +KAR    DPAA +  A       HGGV
Sbjct: 300 GFGSDLGAEKFMDIKAREAGFDPAAVVVVATIRALKMHGGV 340



to top

>FTHS_STAAS (Q6G8J5) Formate--tetrahydrofolate ligase (EC 6.3.4.3)|
           (Formyltetrahydrofolate synthetase) (FHS) (FTHFS)
          Length = 555

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
 Frame = +2

Query: 137 GFGDDNGSTEEKALKARRRESDPAAALAAAR-HEFGEHGGV 256
           GFG D G+ +   +KAR    DPAA +  A       HGGV
Sbjct: 300 GFGSDLGAEKFMDIKAREAGFDPAAVVVVATIRALKMHGGV 340



to top

>FTHS_STAAR (Q6GFX6) Formate--tetrahydrofolate ligase (EC 6.3.4.3)|
           (Formyltetrahydrofolate synthetase) (FHS) (FTHFS)
          Length = 555

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
 Frame = +2

Query: 137 GFGDDNGSTEEKALKARRRESDPAAALAAAR-HEFGEHGGV 256
           GFG D G+ +   +KAR    DPAA +  A       HGGV
Sbjct: 300 GFGSDLGAEKFMDIKAREAGFDPAAVVVVATIRALKMHGGV 340



to top

>CGL_MOUSE (Q8VCN5) Cystathionine gamma-lyase (EC 4.4.1.1)|
           (Gamma-cystathionase)
          Length = 398

 Score = 29.3 bits (64), Expect = 5.8
 Identities = 15/42 (35%), Positives = 24/42 (57%)
 Frame = +2

Query: 338 PERGDLYIYSRHFNPTVLALGRQMAALEGTEAAYCTAXGMSA 463
           P +   + YSR  NPT   L + +AAL+G + +   A G++A
Sbjct: 51  PGQSSGFEYSRSGNPTRNCLEKAVAALDGAKHSLAFASGLAA 92



to top

>SEMG1_HUMAN (P04279) Semenogelin-1 precursor (Semenogelin I) (SGI) [Contains:|
           Alpha-inhibin-92; Alpha-inhibin-31; Seminal basic
           protein]
          Length = 462

 Score = 29.3 bits (64), Expect = 5.8
 Identities = 19/83 (22%), Positives = 36/83 (43%)
 Frame = +2

Query: 110 LKRPTPQNDGFGDDNGSTEEKALKARRRESDPAAALAAARHEFGEHGGVNMSIEASATFT 289
           ++ P P+ + +  +N   E    ++  RE D  +     RH+ G HGG+++ I       
Sbjct: 388 IQAPNPKQEPWHGENAKGESG--QSTNREQDLLSHEQKGRHQHGSHGGLDIVI------- 438

Query: 290 VMEPDTMRRLFTGELGPERGDLY 358
           + + D   R     L  +R  L+
Sbjct: 439 IEQEDDSDRHLAQHLNNDRNPLF 461



to top

>LEU3_SYMTH (Q67JY2) 3-isopropylmalate dehydrogenase (EC 1.1.1.85) (Beta-IPM|
           dehydrogenase) (IMDH) (3-IPM-DH)
          Length = 368

 Score = 29.3 bits (64), Expect = 5.8
 Identities = 25/79 (31%), Positives = 38/79 (48%), Gaps = 5/79 (6%)
 Frame = +2

Query: 59  PTVPMAHVLAAAEPLTLLKRPTP-----QNDGFGDDNGSTEEKALKARRRESDPAAALAA 223
           P V + H+LA    + +L+RP        ++ FGD    ++E A+        P+A+L A
Sbjct: 218 PDVEVEHLLADNAAMQILRRPGDFDVMLASNLFGDF--LSDEAAMLTGSIGLLPSASLGA 275

Query: 224 ARHEFGEHGGVNMSIEASA 280
           AR+ FG   G    I  SA
Sbjct: 276 ARNRFGLPKGFYEPIHGSA 294



to top

>METB_HERAU (P24601) Probable cystathionine gamma-synthase (EC 2.5.1.48) (CGS)|
           (O-succinylhomoserine (thiol)-lyase) (Fragment)
          Length = 319

 Score = 28.9 bits (63), Expect = 7.6
 Identities = 17/36 (47%), Positives = 20/36 (55%)
 Frame = +2

Query: 356 YIYSRHFNPTVLALGRQMAALEGTEAAYCTAXGMSA 463
           Y YSR  NPT  AL   +AALE  + A   A G+ A
Sbjct: 44  YEYSRTDNPTRTALQTCLAALEEAKHALVFASGLGA 79



to top

>ACON_MYCAV (O08451) Aconitate hydratase (EC 4.2.1.3) (Citrate hydro-lyase)|
           (Aconitase)
          Length = 961

 Score = 28.9 bits (63), Expect = 7.6
 Identities = 27/98 (27%), Positives = 44/98 (44%), Gaps = 1/98 (1%)
 Frame = +2

Query: 119 PTPQNDGFGDDNGSTEEKALKARRRESDPAAALAAARHEFG-EHGGVNMSIEASATFTVM 295
           P   ++G  DD  + +  A  A  R S+P    +    EF  +HG V ++   S T T  
Sbjct: 445 PGAPSNGHADDLPAVQSAAAHANGRPSNPVTVRSDELGEFVLDHGAVVIAAVTSCTNT-S 503

Query: 296 EPDTMRRLFTGELGPERGDLYIYSRHFNPTVLALGRQM 409
            P+ M  L    L  +R +  + S+ +  T +A G Q+
Sbjct: 504 NPEVM--LGAALLARQRVEKGLASKPWVKTTMAPGSQV 539



to top

>RS16_RHILO (Q98E70) 30S ribosomal protein S16|
          Length = 133

 Score = 28.9 bits (63), Expect = 7.6
 Identities = 18/62 (29%), Positives = 27/62 (43%)
 Frame = +2

Query: 41  KHPVIRPTVPMAHVLAAAEPLTLLKRPTPQNDGFGDDNGSTEEKALKARRRESDPAAALA 220
           KH +     P   VL   +   L KR    N    +     +E+A   ++ + D AAA+A
Sbjct: 59  KHWLSHGAQPTDRVLRFLDEAGLAKRDARSNPKKAEPGKKAQERAALLKKAQEDAAAAVA 118

Query: 221 AA 226
           AA
Sbjct: 119 AA 120



to top

>FTHS_STAES (Q8CNV9) Formate--tetrahydrofolate ligase (EC 6.3.4.3)|
           (Formyltetrahydrofolate synthetase) (FHS) (FTHFS)
          Length = 555

 Score = 28.5 bits (62), Expect = 9.9
 Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
 Frame = +2

Query: 137 GFGDDNGSTEEKALKARRRESDPAAALAAAR-HEFGEHGGV 256
           GFG D G+ +   +KAR    DP+A +  A       HGGV
Sbjct: 300 GFGSDLGAEKFMNIKAREAGFDPSAVVVVATIRALKMHGGV 340



to top

>FTHS_STAEQ (Q5HNH4) Formate--tetrahydrofolate ligase (EC 6.3.4.3)|
           (Formyltetrahydrofolate synthetase) (FHS) (FTHFS)
          Length = 555

 Score = 28.5 bits (62), Expect = 9.9
 Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
 Frame = +2

Query: 137 GFGDDNGSTEEKALKARRRESDPAAALAAAR-HEFGEHGGV 256
           GFG D G+ +   +KAR    DP+A +  A       HGGV
Sbjct: 300 GFGSDLGAEKFMNIKAREAGFDPSAVVVVATIRALKMHGGV 340



to top

>CGL_MACFA (Q60HG7) Cystathionine gamma-lyase (EC 4.4.1.1)|
           (Gamma-cystathionase)
          Length = 405

 Score = 28.5 bits (62), Expect = 9.9
 Identities = 15/45 (33%), Positives = 24/45 (53%)
 Frame = +2

Query: 329 ELGPERGDLYIYSRHFNPTVLALGRQMAALEGTEAAYCTAXGMSA 463
           +  P +   + YSR  NPT   L + +AAL+G +     A G++A
Sbjct: 49  QAAPGQHSGFEYSRSGNPTRNCLEKAVAALDGAKYCLAFASGLAA 93



to top

>METC_LACLC (P0A4K3) Cystathionine beta-lyase (EC 4.4.1.8) (CBL)|
           (Beta-cystathionase) (Cysteine lyase)
          Length = 380

 Score = 28.5 bits (62), Expect = 9.9
 Identities = 22/75 (29%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
 Frame = +2

Query: 245 HGGVNMSIEASA-TFTVMEPDTMRRLFTGELGPERGDLYIYSRHFNPTVLALGRQMAALE 421
           HGG++      A +  + +  T ++   G+  P+    Y YSR  NPT  AL   +A LE
Sbjct: 10  HGGISTDKTTGAVSVPIYQTSTYKQNGLGQ--PKE---YEYSRSGNPTRHALEELIADLE 64

Query: 422 GTEAAYCTAXGMSAI 466
           G    +  + G++ I
Sbjct: 65  GGVQGFAFSSGLAGI 79



to top

>METC_LACLA (P0A4K2) Cystathionine beta-lyase (EC 4.4.1.8) (CBL)|
           (Beta-cystathionase) (Cysteine lyase)
          Length = 380

 Score = 28.5 bits (62), Expect = 9.9
 Identities = 22/75 (29%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
 Frame = +2

Query: 245 HGGVNMSIEASA-TFTVMEPDTMRRLFTGELGPERGDLYIYSRHFNPTVLALGRQMAALE 421
           HGG++      A +  + +  T ++   G+  P+    Y YSR  NPT  AL   +A LE
Sbjct: 10  HGGISTDKTTGAVSVPIYQTSTYKQNGLGQ--PKE---YEYSRSGNPTRHALEELIADLE 64

Query: 422 GTEAAYCTAXGMSAI 466
           G    +  + G++ I
Sbjct: 65  GGVQGFAFSSGLAGI 79



to top

>ATR_KLULA (Q6CT34) Serine/threonine-protein kinase MEC1 (EC 2.7.11.1)|
           (DNA-damage checkpoint kinase MEC1) (Mitosis entry
           checkpoint protein 1) (ATR homolog)
          Length = 2287

 Score = 28.5 bits (62), Expect = 9.9
 Identities = 28/107 (26%), Positives = 40/107 (37%), Gaps = 2/107 (1%)
 Frame = +2

Query: 143 GDDNGSTEEKALKARRRESDPAAALAAARHEFGEHGGVNMSIEASATFTVMEPDTMRRLF 322
           G+D    EEK LK   R S    A+A  +H F        SIE   T  +      R+ +
Sbjct: 661 GNDKSLVEEKKLKLLDRNSRQIFAVALVKHGF-------FSIETIQTLFLNTAPKFRKNY 713

Query: 323 TGELGPERGDLYIYSRHFNPTVLALGRQMAALEG--TEAAYCTAXGM 457
                     LY+        VL + +Q+  L+G  TE   C    +
Sbjct: 714 I--------TLYLPDYKTLAEVLKMSKQILTLDGQITETERCVLSSL 752



to top

>RS16_RHIME (Q92L43) 30S ribosomal protein S16|
          Length = 124

 Score = 28.5 bits (62), Expect = 9.9
 Identities = 16/65 (24%), Positives = 29/65 (44%)
 Frame = +2

Query: 41  KHPVIRPTVPMAHVLAAAEPLTLLKRPTPQNDGFGDDNGSTEEKALKARRRESDPAAALA 220
           +H + +   P   V+   +   L KRP   N          +E+A +A+++  + AAA +
Sbjct: 60  QHWIAQGAQPTDRVMRFLDQAGLAKRPARNNPTKAQPGKKAQERAAEAKQKAEEAAAAAS 119

Query: 221 AARHE 235
            A  E
Sbjct: 120 EAAAE 124


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.313    0.134    0.422 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 40,853,084
Number of Sequences: 219361
Number of extensions: 681939
Number of successful extensions: 1896
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 1859
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1891
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3362826254
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
to top