| Clone Name | bast79d02 |
|---|---|
| Clone Library Name | barley_pub |
>MEGL_PSEPU (P13254) Methionine gamma-lyase (EC 4.4.1.11) (L-methioninase)| Length = 398 Score = 45.4 bits (106), Expect = 8e-05 Identities = 34/93 (36%), Positives = 45/93 (48%), Gaps = 3/93 (3%) Frame = +2 Query: 203 PAAALAAARHEFG--EHGGVNMS-IEASATFTVMEPDTMRRLFTGELGPERGDLYIYSRH 373 P A A H + +HGG + + +ATFT + F GE + YSR Sbjct: 8 PGFATRAIHHGYDPQDHGGALVPPVYQTATFTFPTVEYGAACFAGEQAG-----HFYSRI 62 Query: 374 FNPTVLALGRQMAALEGTEAAYCTAXGMSAISS 472 NPT+ L +MA+LEG EA A GM AI+S Sbjct: 63 SNPTLNLLEARMASLEGGEAGLALASGMGAITS 95
>METZ_PSEAE (P55218) O-succinylhomoserine sulfhydrylase (EC 2.5.1.-) (OSH| sulfhydrylase) Length = 403 Score = 43.9 bits (102), Expect = 2e-04 Identities = 31/76 (40%), Positives = 38/76 (50%) Frame = +2 Query: 239 GEHGGVNMSIEASATFTVMEPDTMRRLFTGELGPERGDLYIYSRHFNPTVLALGRQMAAL 418 GEHG + +S F R F GE+ +YSR+ NPTV ++AAL Sbjct: 34 GEHGEA-LFTTSSYVFRTAADAAAR--FAGEVPGN-----VYSRYTNPTVRTFEERIAAL 85 Query: 419 EGTEAAYCTAXGMSAI 466 EG E A TA GMSAI Sbjct: 86 EGAEQAVATASGMSAI 101
>MET17_KLULA (Q92441) Protein MET17 [Includes: O-acetylhomoserine sulfhydrylase| (EC 2.5.1.49) (OAH sulfhydrylase) (Homocysteine synthase); O-acetylserine sulfhydrylase (EC 2.5.1.47) (OAS sulfhydrylase)] Length = 443 Score = 38.5 bits (88), Expect = 0.010 Identities = 19/36 (52%), Positives = 25/36 (69%) Frame = +2 Query: 356 YIYSRHFNPTVLALGRQMAALEGTEAAYCTAXGMSA 463 YIYSR NPT+ L +++AALEG AA T+ G +A Sbjct: 52 YIYSRIMNPTLDVLEKRLAALEGGIAALATSSGQAA 87
>CYSD_SCHPO (O13326) O-acetylhomoserine (thiol)-lyase (EC 2.5.1.49)| (O-acetylhomoserine sulfhydrylase) (OAH sulfhydrylase) (Homocysteine synthase) Length = 429 Score = 35.8 bits (81), Expect = 0.062 Identities = 18/37 (48%), Positives = 23/37 (62%) Frame = +2 Query: 356 YIYSRHFNPTVLALGRQMAALEGTEAAYCTAXGMSAI 466 YIYSR NPT +++AALE AA T+ G SA+ Sbjct: 55 YIYSRMMNPTADVFEKRIAALEHGAAAIATSSGTSAL 91
>METB_HELPJ (Q9ZMW7) Cystathionine gamma-synthase (EC 2.5.1.48) (CGS)| (O-succinylhomoserine (thiol)-lyase) Length = 380 Score = 35.4 bits (80), Expect = 0.081 Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 1/75 (1%) Frame = +2 Query: 245 HGGVNMSIEASA-TFTVMEPDTMRRLFTGELGPERGDLYIYSRHFNPTVLALGRQMAALE 421 HGG+N A + + + T R+ +G +G Y YSR NPT AL +A LE Sbjct: 9 HGGINEDATTGAVSVPIYQTSTYRQ---DAIGRHKG--YEYSRSGNPTRFALEELIADLE 63 Query: 422 GTEAAYCTAXGMSAI 466 G + A G++ I Sbjct: 64 GGVKGFAFASGLAGI 78
>METC_ARATH (P53780) Cystathionine beta-lyase, chloroplast precursor (EC| 4.4.1.8) (CBL) (Beta-cystathionase) (Cysteine lyase) Length = 464 Score = 35.0 bits (79), Expect = 0.11 Identities = 28/107 (26%), Positives = 49/107 (45%) Frame = +2 Query: 152 NGSTEEKALKARRRESDPAAALAAARHEFGEHGGVNMSIEASATFTVMEPDTMRRLFTGE 331 N +T+ + E+ + L ++F ++ + +ATF +P + E Sbjct: 70 NNTTDSLNTMNIKEEASVSTLLVNLDNKFDPFDAMSTPLYQTATFK--QPSAI------E 121 Query: 332 LGPERGDLYIYSRHFNPTVLALGRQMAALEGTEAAYCTAXGMSAISS 472 GP Y Y+R NPT AL +A L+ + A+C GM+A+S+ Sbjct: 122 NGP-----YDYTRSGNPTRDALESLLAKLDKADRAFCFTSGMAALSA 163
>MET17_YEAST (P06106) Protein MET17 [Includes: O-acetylhomoserine sulfhydrylase| (EC 2.5.1.49) (OAH sulfhydrylase) (Homocysteine synthase); O-acetylserine sulfhydrylase (EC 2.5.1.47) (OAS sulfhydrylase)] Length = 443 Score = 34.7 bits (78), Expect = 0.14 Identities = 17/36 (47%), Positives = 22/36 (61%) Frame = +2 Query: 356 YIYSRHFNPTVLALGRQMAALEGTEAAYCTAXGMSA 463 Y+YSR NPT L ++AALEG AA + G +A Sbjct: 53 YVYSRFQNPTSNVLEERIAALEGGAAALAVSSGQAA 88
>METB_ECOLI (P00935) Cystathionine gamma-synthase (EC 2.5.1.48) (CGS)| (O-succinylhomoserine (thiol)-lyase) Length = 386 Score = 34.7 bits (78), Expect = 0.14 Identities = 29/85 (34%), Positives = 39/85 (45%) Frame = +2 Query: 212 ALAAARHEFGEHGGVNMSIEASATFTVMEPDTMRRLFTGELGPERGDLYIYSRHFNPTVL 391 A+ + ++ ++G V I S+T+ FTG P D YSR NPT Sbjct: 9 AVRSGLNDDEQYGCVVPPIHLSSTYN----------FTGFNEPRAHD---YSRRGNPTRD 55 Query: 392 ALGRQMAALEGTEAAYCTAXGMSAI 466 + R +A LEG A T GMSAI Sbjct: 56 VVQRALAELEGGAGAVLTNTGMSAI 80
>METB_HELPY (P56069) Cystathionine gamma-synthase (EC 2.5.1.48) (CGS)| (O-succinylhomoserine (thiol)-lyase) Length = 380 Score = 33.5 bits (75), Expect = 0.31 Identities = 24/75 (32%), Positives = 36/75 (48%), Gaps = 1/75 (1%) Frame = +2 Query: 245 HGGVNMSIEASA-TFTVMEPDTMRRLFTGELGPERGDLYIYSRHFNPTVLALGRQMAALE 421 HGG++ A + + + T R+ +G +G Y YSR NPT AL +A LE Sbjct: 9 HGGISEDATTGAVSVPIYQTSTYRQ---DAIGRHKG--YEYSRSGNPTRFALEELIADLE 63 Query: 422 GTEAAYCTAXGMSAI 466 G + A G++ I Sbjct: 64 GGVKGFAFASGLAGI 78
>CYSD_EMENI (P50125) O-acetylhomoserine (thiol)-lyase (EC 2.5.1.49)| (O-acetylhomoserine sulfhydrylase) (OAH sulfhydrylase) (Homocysteine synthase) Length = 437 Score = 33.5 bits (75), Expect = 0.31 Identities = 17/35 (48%), Positives = 22/35 (62%) Frame = +2 Query: 359 IYSRHFNPTVLALGRQMAALEGTEAAYCTAXGMSA 463 IYSR NPTV +++AALEG AA + G +A Sbjct: 57 IYSRIMNPTVDVFEKRIAALEGGVAAVAASSGQAA 91
>METB_ARATH (P55217) Cystathionine gamma-synthase, chloroplast precursor (EC| 2.5.1.48) (CGS) (O-succinylhomoserine (thiol)-lyase) Length = 563 Score = 33.1 bits (74), Expect = 0.40 Identities = 16/41 (39%), Positives = 24/41 (58%) Frame = +2 Query: 341 ERGDLYIYSRHFNPTVLALGRQMAALEGTEAAYCTAXGMSA 463 +R + Y R+ NPT + L +++ALEG E+ A GM A Sbjct: 219 KRSVSFEYGRYGNPTTVVLEDKISALEGAESTLVMASGMCA 259
>CGL_RAT (P18757) Cystathionine gamma-lyase (EC 4.4.1.1)| (Gamma-cystathionase) (Probasin-related antigen) (PRB-RA) Length = 398 Score = 30.8 bits (68), Expect = 2.0 Identities = 15/45 (33%), Positives = 26/45 (57%) Frame = +2 Query: 338 PERGDLYIYSRHFNPTVLALGRQMAALEGTEAAYCTAXGMSAISS 472 P + ++YSR NPT L + +AAL+G + A G++A ++ Sbjct: 51 PGQSSGFVYSRSGNPTRNCLEKAVAALDGAKHCLTFARGLAATTT 95
>UL56_HHV11 (P10240) Protein UL56| Length = 197 Score = 30.0 bits (66), Expect = 3.4 Identities = 21/70 (30%), Positives = 30/70 (42%) Frame = +2 Query: 119 PTPQNDGFGDDNGSTEEKALKARRRESDPAAALAAARHEFGEHGGVNMSIEASATFTVME 298 PT +G + G + + A +A RR + A A R FG G + + T V Sbjct: 64 PTSSGEGEASERGRSRQAAQRAARR-ARRRAERRAQRRSFGPGGLLATPLFLPETRLVAP 122 Query: 299 PDTMRRLFTG 328 PD R L +G Sbjct: 123 PDITRDLLSG 132
>METB_MYCTU (P66875) Cystathionine gamma-synthase (EC 2.5.1.48) (CGS)| (O-succinylhomoserine (thiol)-lyase) Length = 388 Score = 29.6 bits (65), Expect = 4.4 Identities = 25/72 (34%), Positives = 34/72 (47%) Frame = +2 Query: 248 GGVNMSIEASATFTVMEPDTMRRLFTGELGPERGDLYIYSRHFNPTVLALGRQMAALEGT 427 G VN+ I AS+TF +G RG + Y+R NPT AL +AA+E Sbjct: 30 GAVNVPIYASSTFA-----------QDGVGGLRGG-FEYARTGNPTRAALEASLAAVEEG 77 Query: 428 EAAYCTAXGMSA 463 A + GM+A Sbjct: 78 AFARAFSSGMAA 89
>METB_MYCBO (P66876) Cystathionine gamma-synthase (EC 2.5.1.48) (CGS)| (O-succinylhomoserine (thiol)-lyase) Length = 388 Score = 29.6 bits (65), Expect = 4.4 Identities = 25/72 (34%), Positives = 34/72 (47%) Frame = +2 Query: 248 GGVNMSIEASATFTVMEPDTMRRLFTGELGPERGDLYIYSRHFNPTVLALGRQMAALEGT 427 G VN+ I AS+TF +G RG + Y+R NPT AL +AA+E Sbjct: 30 GAVNVPIYASSTFA-----------QDGVGGLRGG-FEYARTGNPTRAALEASLAAVEEG 77 Query: 428 EAAYCTAXGMSA 463 A + GM+A Sbjct: 78 AFARAFSSGMAA 89
>FTHS_STAAW (Q8NW37) Formate--tetrahydrofolate ligase (EC 6.3.4.3)| (Formyltetrahydrofolate synthetase) (FHS) (FTHFS) Length = 555 Score = 29.6 bits (65), Expect = 4.4 Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 1/41 (2%) Frame = +2 Query: 137 GFGDDNGSTEEKALKARRRESDPAAALAAAR-HEFGEHGGV 256 GFG D G+ + +KAR DPAA + A HGGV Sbjct: 300 GFGSDLGAEKFMDIKAREAGFDPAAVVVVATIRALKMHGGV 340
>FTHS_STAAS (Q6G8J5) Formate--tetrahydrofolate ligase (EC 6.3.4.3)| (Formyltetrahydrofolate synthetase) (FHS) (FTHFS) Length = 555 Score = 29.6 bits (65), Expect = 4.4 Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 1/41 (2%) Frame = +2 Query: 137 GFGDDNGSTEEKALKARRRESDPAAALAAAR-HEFGEHGGV 256 GFG D G+ + +KAR DPAA + A HGGV Sbjct: 300 GFGSDLGAEKFMDIKAREAGFDPAAVVVVATIRALKMHGGV 340
>FTHS_STAAR (Q6GFX6) Formate--tetrahydrofolate ligase (EC 6.3.4.3)| (Formyltetrahydrofolate synthetase) (FHS) (FTHFS) Length = 555 Score = 29.6 bits (65), Expect = 4.4 Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 1/41 (2%) Frame = +2 Query: 137 GFGDDNGSTEEKALKARRRESDPAAALAAAR-HEFGEHGGV 256 GFG D G+ + +KAR DPAA + A HGGV Sbjct: 300 GFGSDLGAEKFMDIKAREAGFDPAAVVVVATIRALKMHGGV 340
>CGL_MOUSE (Q8VCN5) Cystathionine gamma-lyase (EC 4.4.1.1)| (Gamma-cystathionase) Length = 398 Score = 29.3 bits (64), Expect = 5.8 Identities = 15/42 (35%), Positives = 24/42 (57%) Frame = +2 Query: 338 PERGDLYIYSRHFNPTVLALGRQMAALEGTEAAYCTAXGMSA 463 P + + YSR NPT L + +AAL+G + + A G++A Sbjct: 51 PGQSSGFEYSRSGNPTRNCLEKAVAALDGAKHSLAFASGLAA 92
>SEMG1_HUMAN (P04279) Semenogelin-1 precursor (Semenogelin I) (SGI) [Contains:| Alpha-inhibin-92; Alpha-inhibin-31; Seminal basic protein] Length = 462 Score = 29.3 bits (64), Expect = 5.8 Identities = 19/83 (22%), Positives = 36/83 (43%) Frame = +2 Query: 110 LKRPTPQNDGFGDDNGSTEEKALKARRRESDPAAALAAARHEFGEHGGVNMSIEASATFT 289 ++ P P+ + + +N E ++ RE D + RH+ G HGG+++ I Sbjct: 388 IQAPNPKQEPWHGENAKGESG--QSTNREQDLLSHEQKGRHQHGSHGGLDIVI------- 438 Query: 290 VMEPDTMRRLFTGELGPERGDLY 358 + + D R L +R L+ Sbjct: 439 IEQEDDSDRHLAQHLNNDRNPLF 461
>LEU3_SYMTH (Q67JY2) 3-isopropylmalate dehydrogenase (EC 1.1.1.85) (Beta-IPM| dehydrogenase) (IMDH) (3-IPM-DH) Length = 368 Score = 29.3 bits (64), Expect = 5.8 Identities = 25/79 (31%), Positives = 38/79 (48%), Gaps = 5/79 (6%) Frame = +2 Query: 59 PTVPMAHVLAAAEPLTLLKRPTP-----QNDGFGDDNGSTEEKALKARRRESDPAAALAA 223 P V + H+LA + +L+RP ++ FGD ++E A+ P+A+L A Sbjct: 218 PDVEVEHLLADNAAMQILRRPGDFDVMLASNLFGDF--LSDEAAMLTGSIGLLPSASLGA 275 Query: 224 ARHEFGEHGGVNMSIEASA 280 AR+ FG G I SA Sbjct: 276 ARNRFGLPKGFYEPIHGSA 294
>METB_HERAU (P24601) Probable cystathionine gamma-synthase (EC 2.5.1.48) (CGS)| (O-succinylhomoserine (thiol)-lyase) (Fragment) Length = 319 Score = 28.9 bits (63), Expect = 7.6 Identities = 17/36 (47%), Positives = 20/36 (55%) Frame = +2 Query: 356 YIYSRHFNPTVLALGRQMAALEGTEAAYCTAXGMSA 463 Y YSR NPT AL +AALE + A A G+ A Sbjct: 44 YEYSRTDNPTRTALQTCLAALEEAKHALVFASGLGA 79
>ACON_MYCAV (O08451) Aconitate hydratase (EC 4.2.1.3) (Citrate hydro-lyase)| (Aconitase) Length = 961 Score = 28.9 bits (63), Expect = 7.6 Identities = 27/98 (27%), Positives = 44/98 (44%), Gaps = 1/98 (1%) Frame = +2 Query: 119 PTPQNDGFGDDNGSTEEKALKARRRESDPAAALAAARHEFG-EHGGVNMSIEASATFTVM 295 P ++G DD + + A A R S+P + EF +HG V ++ S T T Sbjct: 445 PGAPSNGHADDLPAVQSAAAHANGRPSNPVTVRSDELGEFVLDHGAVVIAAVTSCTNT-S 503 Query: 296 EPDTMRRLFTGELGPERGDLYIYSRHFNPTVLALGRQM 409 P+ M L L +R + + S+ + T +A G Q+ Sbjct: 504 NPEVM--LGAALLARQRVEKGLASKPWVKTTMAPGSQV 539
>RS16_RHILO (Q98E70) 30S ribosomal protein S16| Length = 133 Score = 28.9 bits (63), Expect = 7.6 Identities = 18/62 (29%), Positives = 27/62 (43%) Frame = +2 Query: 41 KHPVIRPTVPMAHVLAAAEPLTLLKRPTPQNDGFGDDNGSTEEKALKARRRESDPAAALA 220 KH + P VL + L KR N + +E+A ++ + D AAA+A Sbjct: 59 KHWLSHGAQPTDRVLRFLDEAGLAKRDARSNPKKAEPGKKAQERAALLKKAQEDAAAAVA 118 Query: 221 AA 226 AA Sbjct: 119 AA 120
>FTHS_STAES (Q8CNV9) Formate--tetrahydrofolate ligase (EC 6.3.4.3)| (Formyltetrahydrofolate synthetase) (FHS) (FTHFS) Length = 555 Score = 28.5 bits (62), Expect = 9.9 Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 1/41 (2%) Frame = +2 Query: 137 GFGDDNGSTEEKALKARRRESDPAAALAAAR-HEFGEHGGV 256 GFG D G+ + +KAR DP+A + A HGGV Sbjct: 300 GFGSDLGAEKFMNIKAREAGFDPSAVVVVATIRALKMHGGV 340
>FTHS_STAEQ (Q5HNH4) Formate--tetrahydrofolate ligase (EC 6.3.4.3)| (Formyltetrahydrofolate synthetase) (FHS) (FTHFS) Length = 555 Score = 28.5 bits (62), Expect = 9.9 Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 1/41 (2%) Frame = +2 Query: 137 GFGDDNGSTEEKALKARRRESDPAAALAAAR-HEFGEHGGV 256 GFG D G+ + +KAR DP+A + A HGGV Sbjct: 300 GFGSDLGAEKFMNIKAREAGFDPSAVVVVATIRALKMHGGV 340
>CGL_MACFA (Q60HG7) Cystathionine gamma-lyase (EC 4.4.1.1)| (Gamma-cystathionase) Length = 405 Score = 28.5 bits (62), Expect = 9.9 Identities = 15/45 (33%), Positives = 24/45 (53%) Frame = +2 Query: 329 ELGPERGDLYIYSRHFNPTVLALGRQMAALEGTEAAYCTAXGMSA 463 + P + + YSR NPT L + +AAL+G + A G++A Sbjct: 49 QAAPGQHSGFEYSRSGNPTRNCLEKAVAALDGAKYCLAFASGLAA 93
>METC_LACLC (P0A4K3) Cystathionine beta-lyase (EC 4.4.1.8) (CBL)| (Beta-cystathionase) (Cysteine lyase) Length = 380 Score = 28.5 bits (62), Expect = 9.9 Identities = 22/75 (29%), Positives = 36/75 (48%), Gaps = 1/75 (1%) Frame = +2 Query: 245 HGGVNMSIEASA-TFTVMEPDTMRRLFTGELGPERGDLYIYSRHFNPTVLALGRQMAALE 421 HGG++ A + + + T ++ G+ P+ Y YSR NPT AL +A LE Sbjct: 10 HGGISTDKTTGAVSVPIYQTSTYKQNGLGQ--PKE---YEYSRSGNPTRHALEELIADLE 64 Query: 422 GTEAAYCTAXGMSAI 466 G + + G++ I Sbjct: 65 GGVQGFAFSSGLAGI 79
>METC_LACLA (P0A4K2) Cystathionine beta-lyase (EC 4.4.1.8) (CBL)| (Beta-cystathionase) (Cysteine lyase) Length = 380 Score = 28.5 bits (62), Expect = 9.9 Identities = 22/75 (29%), Positives = 36/75 (48%), Gaps = 1/75 (1%) Frame = +2 Query: 245 HGGVNMSIEASA-TFTVMEPDTMRRLFTGELGPERGDLYIYSRHFNPTVLALGRQMAALE 421 HGG++ A + + + T ++ G+ P+ Y YSR NPT AL +A LE Sbjct: 10 HGGISTDKTTGAVSVPIYQTSTYKQNGLGQ--PKE---YEYSRSGNPTRHALEELIADLE 64 Query: 422 GTEAAYCTAXGMSAI 466 G + + G++ I Sbjct: 65 GGVQGFAFSSGLAGI 79
>ATR_KLULA (Q6CT34) Serine/threonine-protein kinase MEC1 (EC 2.7.11.1)| (DNA-damage checkpoint kinase MEC1) (Mitosis entry checkpoint protein 1) (ATR homolog) Length = 2287 Score = 28.5 bits (62), Expect = 9.9 Identities = 28/107 (26%), Positives = 40/107 (37%), Gaps = 2/107 (1%) Frame = +2 Query: 143 GDDNGSTEEKALKARRRESDPAAALAAARHEFGEHGGVNMSIEASATFTVMEPDTMRRLF 322 G+D EEK LK R S A+A +H F SIE T + R+ + Sbjct: 661 GNDKSLVEEKKLKLLDRNSRQIFAVALVKHGF-------FSIETIQTLFLNTAPKFRKNY 713 Query: 323 TGELGPERGDLYIYSRHFNPTVLALGRQMAALEG--TEAAYCTAXGM 457 LY+ VL + +Q+ L+G TE C + Sbjct: 714 I--------TLYLPDYKTLAEVLKMSKQILTLDGQITETERCVLSSL 752
>RS16_RHIME (Q92L43) 30S ribosomal protein S16| Length = 124 Score = 28.5 bits (62), Expect = 9.9 Identities = 16/65 (24%), Positives = 29/65 (44%) Frame = +2 Query: 41 KHPVIRPTVPMAHVLAAAEPLTLLKRPTPQNDGFGDDNGSTEEKALKARRRESDPAAALA 220 +H + + P V+ + L KRP N +E+A +A+++ + AAA + Sbjct: 60 QHWIAQGAQPTDRVMRFLDQAGLAKRPARNNPTKAQPGKKAQERAAEAKQKAEEAAAAAS 119 Query: 221 AARHE 235 A E Sbjct: 120 EAAAE 124 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.313 0.134 0.422 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 40,853,084 Number of Sequences: 219361 Number of extensions: 681939 Number of successful extensions: 1896 Number of sequences better than 10.0: 31 Number of HSP's better than 10.0 without gapping: 1859 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1891 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3362826254 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.9 bits)