ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast79c07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_476440.1| Oryza sativa (japonica cultivar-group), mRNA 196 5e-47
2dbj|AK108490.1| Oryza sativa (japonica cultivar-group) cDNA clon... 196 5e-47
3dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 127 4e-26
4dbj|AP005165.4| Oryza sativa (japonica cultivar-group) genomic D... 127 4e-26
5gb|AC091455.12| Mus musculus chromosome 1, clone RP23-23O9, comp... 44 0.42
6emb|CR450695.14| Zebrafish DNA sequence from clone DKEYP-72F10 i... 44 0.42
7gb|AC162866.5| Mus musculus chromosome 1, clone RP23-90B23, comp... 44 0.42
8emb|AJ329433.1|HSA329433 Homo sapiens genomic sequence surroundi... 44 0.42
9emb|AL359707.18| Human DNA sequence from clone RP11-251A15 on ch... 42 1.7
10gb|AC097460.3| Homo sapiens BAC clone RP11-15B17 from 4, complet... 42 1.7
11gb|CP000252.1| Syntrophus aciditrophicus SB, complete genome 42 1.7
12gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, com... 42 1.7
13gb|AC138197.3| Oryza sativa (japonica cultivar-group) chromosome... 40 6.6
14gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, comp... 40 6.6
15ref|XR_000328.2| PREDICTED: Bos taurus similar to DnaJ homolog s... 40 6.6
16gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete ... 40 6.6
17gb|AC147962.1| Oryza sativa chromosome 3 BAC OSJNBa0083K01 genom... 40 6.6
18gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, com... 40 6.6
19gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome 40 6.6
20gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 6.6
21gb|AC123849.3| Mus musculus BAC clone RP23-460B12 from chromosom... 40 6.6
22gb|AC122389.2| Mus musculus BAC clone RP24-80N23 from 16, comple... 40 6.6
23gb|AC101835.7| Mus musculus, clone RP23-227D7, complete sequence 40 6.6
24emb|Z99114.2|BSUB0011 Bacillus subtilis complete genome (section... 40 6.6
25emb|Z46913.1|SAPKSGENE S.ambofaciens gene for hypothetical polyk... 40 6.6
26emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromos... 40 6.6
27gb|AC158917.6| Mus musculus chromosome 5, clone RP24-238D24, com... 40 6.6
28gb|AC091734.3| Genomic Sequence for Oryza sativa, Nipponbare str... 40 6.6
29gb|AC090465.15| Homo sapiens chromosome 18, clone RP11-527C6, co... 40 6.6
30gb|AC105001.3| Homo sapiens chromosome 8, clone CTD-2135J3, comp... 40 6.6
31gb|AC011008.10| Homo sapiens chromosome 8, clone RP11-177H2, com... 40 6.6
32gb|AC156643.2| Mus musculus BAC clone RP23-192O3 from chromosome... 40 6.6
33dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.6
34dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.6
35dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.6
36dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.6
37dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.6
38dbj|AP003267.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.6
39dbj|AP003924.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.6
40ref|XM_234006.3| PREDICTED: Rattus norvegicus DNA methyltransfer... 40 6.6
41dbj|AP004085.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.6
42dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 40 6.6
43dbj|AK120406.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.6
44dbj|AK102238.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.6
45dbj|AK100298.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.6
46dbj|AK068643.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.6
47emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,comp... 40 6.6
48gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 40 6.6
49gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 6.6
50gb|AC091975.3| Homo sapiens chromosome 5 clone RP11-524N5, compl... 40 6.6
51gb|M98258.1|SERDNABP Saccharopolyspora hirsuta DNA-binding prote... 40 6.6
52gb|M27141.1|BACODHAB B.subtilis 2-oxoglutarate dehydrogenase (od... 40 6.6 
>ref|XM_476440.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1023

 Score =  196 bits (99), Expect = 5e-47
 Identities = 177/203 (87%)
 Strand = Plus / Plus

                                                                       
Query: 285 cctggtaggcatcaacgacgcgctcgagtcgctcgagcggcagctcgcctccctgcagga 344
           |||||| || |||| | |||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 123 cctggtcggtatcagcaacgcgctcgagtcgctcgagcggcagctcgcctctctgcagga 182

                                                                       
Query: 345 ccttcaacaccaacaaagatatgagcgagaaaccatcctgggccagattgatcggagtcg 404
           ||| |||||||||||||||||||| ||||| |||||  || ||||||||||||| || ||
Sbjct: 183 cctccaacaccaacaaagatatgaacgagagaccattttgagccagattgatcgcagccg 242

                                                                       
Query: 405 aacatctctccttagcaagctgaaagaatacaagggagaggactgtgaggcgatccatga 464
           |  || ||| |||| |||||| ||||||||||||||  |||||||||| |  || |||||
Sbjct: 243 aggatgtcttcttaacaagctcaaagaatacaaggggcaggactgtgaagtaatacatga 302

                                  
Query: 465 ggctgctgcttttgctggtgaaa 487
           ||||||| |||||||||||||||
Sbjct: 303 ggctgcttcttttgctggtgaaa 325



 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 120 ggccatggaaggggaggaggag 141
           ||||||||||||||||||||||
Sbjct: 90  ggccatggaaggggaggaggag 111
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>dbj|AK108490.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-143-G01, full
           insert sequence
          Length = 1023

 Score =  196 bits (99), Expect = 5e-47
 Identities = 177/203 (87%)
 Strand = Plus / Plus

                                                                       
Query: 285 cctggtaggcatcaacgacgcgctcgagtcgctcgagcggcagctcgcctccctgcagga 344
           |||||| || |||| | |||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 123 cctggtcggtatcagcaacgcgctcgagtcgctcgagcggcagctcgcctctctgcagga 182

                                                                       
Query: 345 ccttcaacaccaacaaagatatgagcgagaaaccatcctgggccagattgatcggagtcg 404
           ||| |||||||||||||||||||| ||||| |||||  || ||||||||||||| || ||
Sbjct: 183 cctccaacaccaacaaagatatgaacgagagaccattttgagccagattgatcgcagccg 242

                                                                       
Query: 405 aacatctctccttagcaagctgaaagaatacaagggagaggactgtgaggcgatccatga 464
           |  || ||| |||| |||||| ||||||||||||||  |||||||||| |  || |||||
Sbjct: 243 aggatgtcttcttaacaagctcaaagaatacaaggggcaggactgtgaagtaatacatga 302

                                  
Query: 465 ggctgctgcttttgctggtgaaa 487
           ||||||| |||||||||||||||
Sbjct: 303 ggctgcttcttttgctggtgaaa 325



 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 120 ggccatggaaggggaggaggag 141
           ||||||||||||||||||||||
Sbjct: 90  ggccatggaaggggaggaggag 111
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score =  127 bits (64), Expect = 4e-26
 Identities = 127/148 (85%)
 Strand = Plus / Minus

                                                                           
Query: 340     caggaccttcaacaccaacaaagatatgagcgagaaaccatcctgggccagattgatcgg 399
               |||||||| |||||||||||||||||||| ||||| |||||  || ||||||||||||| 
Sbjct: 1199062 caggacctccaacaccaacaaagatatgaacgagagaccattttgagccagattgatcgc 1199003

                                                                           
Query: 400     agtcgaacatctctccttagcaagctgaaagaatacaagggagaggactgtgaggcgatc 459
               || |||  || ||| |||| |||||| ||||||||||||||  |||||||||| |  || 
Sbjct: 1199002 agccgaggatgtcttcttaacaagctcaaagaatacaaggggcaggactgtgaagtaata 1198943

                                           
Query: 460     catgaggctgctgcttttgctggtgaaa 487
               |||||||||||| |||||||||||||||
Sbjct: 1198942 catgaggctgcttcttttgctggtgaaa 1198915



 Score =  117 bits (59), Expect = 4e-23
 Identities = 73/77 (94%), Gaps = 3/77 (3%)
 Strand = Plus / Minus

                                                                           
Query: 120     ggccatggaaggggaggaggagataggcctcgtcctcgcccgcgcctccgacctccgctc 179
               |||||||||||||||||||   || |||||||||||||||||||||||||||||||||||
Sbjct: 1200262 ggccatggaaggggaggag---attggcctcgtcctcgcccgcgcctccgacctccgctc 1200206

                                
Query: 180     caggatctccgcctgcg 196
               |||||||||||||||||
Sbjct: 1200205 caggatctccgcctgcg 1200189



 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 54/59 (91%)
 Strand = Plus / Minus

                                                                          
Query: 285     cctggtaggcatcaacgacgcgctcgagtcgctcgagcggcagctcgcctccctgcagg 343
               |||||| || |||| | |||||||||||||||||||||||||||||||||| |||||||
Sbjct: 1200079 cctggtcggtatcagcaacgcgctcgagtcgctcgagcggcagctcgcctctctgcagg 1200021
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>dbj|AP005165.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OSJNBa0057M23
          Length = 168029

 Score =  127 bits (64), Expect = 4e-26
 Identities = 127/148 (85%)
 Strand = Plus / Minus

                                                                          
Query: 340    caggaccttcaacaccaacaaagatatgagcgagaaaccatcctgggccagattgatcgg 399
              |||||||| |||||||||||||||||||| ||||| |||||  || ||||||||||||| 
Sbjct: 100669 caggacctccaacaccaacaaagatatgaacgagagaccattttgagccagattgatcgc 100610

                                                                          
Query: 400    agtcgaacatctctccttagcaagctgaaagaatacaagggagaggactgtgaggcgatc 459
              || |||  || ||| |||| |||||| ||||||||||||||  |||||||||| |  || 
Sbjct: 100609 agccgaggatgtcttcttaacaagctcaaagaatacaaggggcaggactgtgaagtaata 100550

                                          
Query: 460    catgaggctgctgcttttgctggtgaaa 487
              |||||||||||| |||||||||||||||
Sbjct: 100549 catgaggctgcttcttttgctggtgaaa 100522



 Score =  117 bits (59), Expect = 4e-23
 Identities = 73/77 (94%), Gaps = 3/77 (3%)
 Strand = Plus / Minus

                                                                          
Query: 120    ggccatggaaggggaggaggagataggcctcgtcctcgcccgcgcctccgacctccgctc 179
              |||||||||||||||||||   || |||||||||||||||||||||||||||||||||||
Sbjct: 101869 ggccatggaaggggaggag---attggcctcgtcctcgcccgcgcctccgacctccgctc 101813

                               
Query: 180    caggatctccgcctgcg 196
              |||||||||||||||||
Sbjct: 101812 caggatctccgcctgcg 101796



 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 54/59 (91%)
 Strand = Plus / Minus

                                                                         
Query: 285    cctggtaggcatcaacgacgcgctcgagtcgctcgagcggcagctcgcctccctgcagg 343
              |||||| || |||| | |||||||||||||||||||||||||||||||||| |||||||
Sbjct: 101686 cctggtcggtatcagcaacgcgctcgagtcgctcgagcggcagctcgcctctctgcagg 101628
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>gb|AC091455.12| Mus musculus chromosome 1, clone RP23-23O9, complete sequence
          Length = 257924

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 125   tggaaggggaggaggagatagg 146
             ||||||||||||||||||||||
Sbjct: 12413 tggaaggggaggaggagatagg 12434
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>emb|CR450695.14| Zebrafish DNA sequence from clone DKEYP-72F10 in linkage group 24,
              complete sequence
          Length = 187631

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 335    ccctgcaggaccttcaacacca 356
              ||||||||||||||||||||||
Sbjct: 157664 ccctgcaggaccttcaacacca 157643
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>gb|AC162866.5| Mus musculus chromosome 1, clone RP23-90B23, complete sequence
          Length = 230597

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 125   tggaaggggaggaggagatagg 146
             ||||||||||||||||||||||
Sbjct: 61352 tggaaggggaggaggagatagg 61331
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>emb|AJ329433.1|HSA329433 Homo sapiens genomic sequence surrounding NotI site, clone
           NR1-DC13R
          Length = 561

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 201 cgccgcacgccccccgccgcgg 222
           ||||||||||||||||||||||
Sbjct: 26  cgccgcacgccccccgccgcgg 5
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>emb|AL359707.18| Human DNA sequence from clone RP11-251A15 on chromosome 10 Contains a
             pseudogene similar to novel protein KIAA0887, the TNKS2
             gene for TRF1-interacting ankyrin-related ADP-ribose
             polymerase 2, a signal recognition particle 9kD (SRP9)
             pseudogene and a CpG island, complete sequence
          Length = 142085

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 428   aagaatacaagggagaggact 448
             |||||||||||||||||||||
Sbjct: 68799 aagaatacaagggagaggact 68779
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>gb|AC097460.3| Homo sapiens BAC clone RP11-15B17 from 4, complete sequence
          Length = 164370

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 195   cgctgccgccgcacgccccccgccg 219
             |||||||||||||||||||| ||||
Sbjct: 56334 cgctgccgccgcacgcccccagccg 56310
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>gb|CP000252.1| Syntrophus aciditrophicus SB, complete genome
          Length = 3179300

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 26      cgccgcgaagtgcaagattgc 46
               |||||||||||||||||||||
Sbjct: 1681147 cgccgcgaagtgcaagattgc 1681167
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>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence
          Length = 3809201

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 296     tcaacgacgcgctcgagtcgctcga 320
               ||||||||||||||| |||||||||
Sbjct: 1460469 tcaacgacgcgctcgcgtcgctcga 1460445
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>gb|AC138197.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0055D24
              map C535, complete sequence
          Length = 174759

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 186    ctccgcctgcgctgccgccg 205
              ||||||||||||||||||||
Sbjct: 159947 ctccgcctgcgctgccgccg 159928
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>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence
          Length = 3510148

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 302     acgcgctcgagtcgctcgagcggc 325
               ||||||||| ||||||||||||||
Sbjct: 1957576 acgcgctcgcgtcgctcgagcggc 1957553
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>ref|XR_000328.2| PREDICTED: Bos taurus similar to DnaJ homolog subfamily A member 2
           (RDJ2) (LOC530283), mRNA
          Length = 618

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 185 tctccgcctgcgctgccgcc 204
           ||||||||||||||||||||
Sbjct: 222 tctccgcctgcgctgccgcc 241
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>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome
          Length = 2584158

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 176     gctccaggatctccgcctgc 195
               ||||||||||||||||||||
Sbjct: 1702689 gctccaggatctccgcctgc 1702708
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>gb|AC147962.1| Oryza sativa chromosome 3 BAC OSJNBa0083K01 genomic sequence, complete
             sequence
          Length = 167239

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 118   aaggccatggaaggggaggaggag 141
             ||||||||||||| ||||||||||
Sbjct: 97379 aaggccatggaagaggaggaggag 97402
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>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence
          Length = 4126292

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 302     acgcgctcgagtcgctcgagcggc 325
               ||||||||| ||||||||||||||
Sbjct: 1474873 acgcgctcgcgtcgctcgagcggc 1474896
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>gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome
          Length = 5650368

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 466     gctgctgcttttgctggtga 485
               ||||||||||||||||||||
Sbjct: 2400006 gctgctgcttttgctggtga 2400025
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 118      aaggccatggaaggggaggaggag 141
                ||||||||||||| ||||||||||
Sbjct: 20987899 aaggccatggaagaggaggaggag 20987876
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>gb|AC123849.3| Mus musculus BAC clone RP23-460B12 from chromosome 16, complete
             sequence
          Length = 172697

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 127   gaaggggaggaggagatagg 146
             ||||||||||||||||||||
Sbjct: 29541 gaaggggaggaggagatagg 29560
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>gb|AC122389.2| Mus musculus BAC clone RP24-80N23 from 16, complete sequence
          Length = 217046

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 127    gaaggggaggaggagatagg 146
              ||||||||||||||||||||
Sbjct: 214649 gaaggggaggaggagatagg 214668
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>gb|AC101835.7| Mus musculus, clone RP23-227D7, complete sequence
          Length = 208667

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 344    accttcaacaccaacaaaga 363
              ||||||||||||||||||||
Sbjct: 138231 accttcaacaccaacaaaga 138250
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>emb|Z99114.2|BSUB0011 Bacillus subtilis complete genome (section 11 of 21): from 2014895 to
             2207855
          Length = 192961

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 462   tgaggctgctgcttttgctg 481
             ||||||||||||||||||||
Sbjct: 92553 tgaggctgctgcttttgctg 92572
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>emb|Z46913.1|SAPKSGENE S.ambofaciens gene for hypothetical polyketide gene
          Length = 3596

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 146  gcctcgtcctcgcccgcgcc 165
            ||||||||||||||||||||
Sbjct: 2107 gcctcgtcctcgcccgcgcc 2088
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>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence
          Length = 4074542

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 302     acgcgctcgagtcgctcgagcggc 325
               ||||||||| ||||||||||||||
Sbjct: 1361972 acgcgctcgcgtcgctcgagcggc 1361995
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>gb|AC158917.6| Mus musculus chromosome 5, clone RP24-238D24, complete sequence
          Length = 184805

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 344    accttcaacaccaacaaaga 363
              ||||||||||||||||||||
Sbjct: 146742 accttcaacaccaacaaaga 146723
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>gb|AC091734.3| Genomic Sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBa0068A07, from Chromosome 10, complete sequence
          Length = 154505

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 118   aaggccatggaaggggaggaggag 141
             ||||||||||||| ||||||||||
Sbjct: 45354 aaggccatggaagaggaggaggag 45377
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>gb|AC090465.15| Homo sapiens chromosome 18, clone RP11-527C6, complete sequence
          Length = 174535

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 127   gaaggggaggaggagatagg 146
             ||||||||||||||||||||
Sbjct: 67301 gaaggggaggaggagatagg 67282
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>gb|AC105001.3| Homo sapiens chromosome 8, clone CTD-2135J3, complete sequence
          Length = 157442

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 436    aagggagaggactgtgaggc 455
              ||||||||||||||||||||
Sbjct: 125236 aagggagaggactgtgaggc 125217
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>gb|AC011008.10| Homo sapiens chromosome 8, clone RP11-177H2, complete sequence
          Length = 162245

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 436    aagggagaggactgtgaggc 455
              ||||||||||||||||||||
Sbjct: 132235 aagggagaggactgtgaggc 132254
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>gb|AC156643.2| Mus musculus BAC clone RP23-192O3 from chromosome 12, complete sequence
          Length = 197420

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 344    accttcaacaccaacaaaga 363
              ||||||||||||||||||||
Sbjct: 158663 accttcaacaccaacaaaga 158682
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 186     ctccgcctgcgctgccgccg 205
               ||||||||||||||||||||
Sbjct: 8858280 ctccgcctgcgctgccgccg 8858299
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 118      aaggccatggaaggggaggaggag 141
                ||||||||||||| ||||||||||
Sbjct: 12523929 aaggccatggaagaggaggaggag 12523952
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 118      aaggccatggaaggggaggaggag 141
                ||||||||||||| ||||||||||
Sbjct: 20980928 aaggccatggaagaggaggaggag 20980905
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 134     aggaggagataggcctcgtc 153
               ||||||||||||||||||||
Sbjct: 6313273 aggaggagataggcctcgtc 6313292
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 349      caacaccaacaaagatatga 368
                ||||||||||||||||||||
Sbjct: 21279478 caacaccaacaaagatatga 21279459
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>dbj|AP003267.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
            clone:P0496H05
          Length = 147817

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 349  caacaccaacaaagatatga 368
            ||||||||||||||||||||
Sbjct: 1416 caacaccaacaaagatatga 1397
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>dbj|AP003924.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:B1064G04
          Length = 186704

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 349    caacaccaacaaagatatga 368
              ||||||||||||||||||||
Sbjct: 176987 caacaccaacaaagatatga 176968
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>ref|XM_234006.3| PREDICTED: Rattus norvegicus DNA methyltransferase 3A (predicted)
            (Dnmt3a_predicted), mRNA
          Length = 4362

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 197  ctgccgccgcacgccccccgccgc 220
            ||||||||||||||| ||||||||
Sbjct: 2399 ctgccgccgcacgccgcccgccgc 2422
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>dbj|AP004085.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1267_F10
          Length = 162669

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 134    aggaggagataggcctcgtc 153
              ||||||||||||||||||||
Sbjct: 110660 aggaggagataggcctcgtc 110679
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>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 315     gctcgagcggcagctcgcct 334
               ||||||||||||||||||||
Sbjct: 6603435 gctcgagcggcagctcgcct 6603454
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>dbj|AK120406.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013089P03, full
           insert sequence
          Length = 2979

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 118 aaggccatggaaggggaggaggag 141
           ||||||||||||| ||||||||||
Sbjct: 126 aaggccatggaagaggaggaggag 103
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>dbj|AK102238.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033088C18, full
           insert sequence
          Length = 1954

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 118 aaggccatggaaggggaggaggag 141
           ||||||||||||| ||||||||||
Sbjct: 77  aaggccatggaagaggaggaggag 54
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>dbj|AK100298.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023077J24, full
           insert sequence
          Length = 3892

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 118 aaggccatggaaggggaggaggag 141
           ||||||||||||| ||||||||||
Sbjct: 126 aaggccatggaagaggaggaggag 103
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>dbj|AK068643.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013159J07, full
           insert sequence
          Length = 2364

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 118 aaggccatggaaggggaggaggag 141
           ||||||||||||| ||||||||||
Sbjct: 126 aaggccatggaagaggaggaggag 103
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>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence
          Length = 5888780

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 317    tcgagcggcagctcgcctccctgc 340
              |||||||||||||||||| |||||
Sbjct: 778286 tcgagcggcagctcgcctacctgc 778263
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 118      aaggccatggaaggggaggaggag 141
                ||||||||||||| ||||||||||
Sbjct: 12531269 aaggccatggaagaggaggaggag 12531292
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 186     ctccgcctgcgctgccgccg 205
               ||||||||||||||||||||
Sbjct: 8929943 ctccgcctgcgctgccgccg 8929962
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>gb|AC091975.3| Homo sapiens chromosome 5 clone RP11-524N5, complete sequence
          Length = 133791

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 127    gaaggggaggaggagatagg 146
              ||||||||||||||||||||
Sbjct: 107498 gaaggggaggaggagatagg 107479
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>gb|M98258.1|SERDNABP Saccharopolyspora hirsuta DNA-binding protein, biotin carboxyl
            carrier protein, polyketide reductase, polyketide
            synthases, and acyl carrier protein genes, complete cds's
          Length = 5135

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 145  ggcctcgtcctcgcccgcgc 164
            ||||||||||||||||||||
Sbjct: 4846 ggcctcgtcctcgcccgcgc 4827
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>gb|M27141.1|BACODHAB B.subtilis 2-oxoglutarate dehydrogenase (odhA) gene 3' end, and
            dihydrolipoamide transsuccinylase (odhB) gene, complete
            cds
          Length = 2232

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 462  tgaggctgctgcttttgctg 481
            ||||||||||||||||||||
Sbjct: 1422 tgaggctgctgcttttgctg 1403


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,404,022
Number of Sequences: 3902068
Number of extensions: 3404022
Number of successful extensions: 79395
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 52
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 78353
Number of HSP's gapped (non-prelim): 1040
length of query: 487
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 465
effective length of database: 17,147,199,772
effective search space: 7973447893980
effective search space used: 7973447893980
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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