ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | bast79b07 |
|---|---|
| Clone Library Name | barley_pub |
>SC61A_HARAN (Q7T278) Protein transport protein Sec61 alpha subunit| Length = 475 Score = 160 bits (406), Expect = 1e-39 Identities = 78/116 (67%), Positives = 97/116 (83%) Frame = +3 Query: 117 GFRVLHLVRPFLAFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADP 296 G + L +++PF A LPE+Q +RKI FREKV++T I+LFIFLVC Q+PL+GI S+ ADP Sbjct: 1 GIKFLEVIKPFCAVLPEIQKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSADP 60 Query: 297 FYWMRVILASNRGTVMELGITPIVTSGMVMQLLVGSKIIEVXHSVREDRALLNGAQ 464 FYWMRVILASNRGT+MELGI+PIVTSG++MQLL G+KIIEV + + DRAL NGAQ Sbjct: 61 FYWMRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDTPK-DRALFNGAQ 115
>SC61A_GADOC (Q8AY32) Protein transport protein Sec61 alpha subunit| Length = 475 Score = 160 bits (406), Expect = 1e-39 Identities = 78/116 (67%), Positives = 97/116 (83%) Frame = +3 Query: 117 GFRVLHLVRPFLAFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADP 296 G + L +++PF A LPE+Q +RKI FREKV++T I+LFIFLVC Q+PL+GI S+ ADP Sbjct: 1 GIKFLEVIKPFCAVLPEIQKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSADP 60 Query: 297 FYWMRVILASNRGTVMELGITPIVTSGMVMQLLVGSKIIEVXHSVREDRALLNGAQ 464 FYWMRVILASNRGT+MELGI+PIVTSG++MQLL G+KIIEV + + DRAL NGAQ Sbjct: 61 FYWMRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDTPK-DRALFNGAQ 115
>SC61A_DISMA (Q7T277) Protein transport protein Sec61 alpha subunit| Length = 475 Score = 160 bits (406), Expect = 1e-39 Identities = 78/116 (67%), Positives = 97/116 (83%) Frame = +3 Query: 117 GFRVLHLVRPFLAFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADP 296 G + L +++PF A LPE+Q +RKI FREKV++T I+LFIFLVC Q+PL+GI S+ ADP Sbjct: 1 GIKFLEVIKPFCAVLPEIQKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSADP 60 Query: 297 FYWMRVILASNRGTVMELGITPIVTSGMVMQLLVGSKIIEVXHSVREDRALLNGAQ 464 FYWMRVILASNRGT+MELGI+PIVTSG++MQLL G+KIIEV + + DRAL NGAQ Sbjct: 61 FYWMRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDTPK-DRALFNGAQ 115
>S61A2_ONCMY (Q98SN8) Protein transport protein Sec61 alpha subunit isoform B| Length = 475 Score = 160 bits (406), Expect = 1e-39 Identities = 78/116 (67%), Positives = 97/116 (83%) Frame = +3 Query: 117 GFRVLHLVRPFLAFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADP 296 G + L +++PF A LPE+Q +RKI FREKV++T I+LFIFLVC Q+PL+GI S+ ADP Sbjct: 1 GIKFLEVIKPFCAVLPEIQKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSADP 60 Query: 297 FYWMRVILASNRGTVMELGITPIVTSGMVMQLLVGSKIIEVXHSVREDRALLNGAQ 464 FYWMRVILASNRGT+MELGI+PIVTSG++MQLL G+KIIEV + + DRAL NGAQ Sbjct: 61 FYWMRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDTPK-DRALFNGAQ 115
>S61A2_MOUSE (Q9JLR1) Protein transport protein Sec61 alpha subunit isoform 2| (Sec61 alpha-2) Length = 475 Score = 160 bits (406), Expect = 1e-39 Identities = 78/116 (67%), Positives = 97/116 (83%) Frame = +3 Query: 117 GFRVLHLVRPFLAFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADP 296 G + L +++PF A LPE+Q +RKI FREKV++T I+LFIFLVC Q+PL+GI S+ ADP Sbjct: 1 GIKFLEVIKPFCAVLPEIQKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSADP 60 Query: 297 FYWMRVILASNRGTVMELGITPIVTSGMVMQLLVGSKIIEVXHSVREDRALLNGAQ 464 FYWMRVILASNRGT+MELGI+PIVTSG++MQLL G+KIIEV + + DRAL NGAQ Sbjct: 61 FYWMRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDTPK-DRALFNGAQ 115
>S61A2_HUMAN (Q9H9S3) Protein transport protein Sec61 alpha subunit isoform 2| (Sec61 alpha-2) Length = 475 Score = 160 bits (406), Expect = 1e-39 Identities = 78/116 (67%), Positives = 97/116 (83%) Frame = +3 Query: 117 GFRVLHLVRPFLAFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADP 296 G + L +++PF A LPE+Q +RKI FREKV++T I+LFIFLVC Q+PL+GI S+ ADP Sbjct: 1 GIKFLEVIKPFCAVLPEIQKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSADP 60 Query: 297 FYWMRVILASNRGTVMELGITPIVTSGMVMQLLVGSKIIEVXHSVREDRALLNGAQ 464 FYWMRVILASNRGT+MELGI+PIVTSG++MQLL G+KIIEV + + DRAL NGAQ Sbjct: 61 FYWMRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDTPK-DRALFNGAQ 115
>S61A1_ONCMY (Q98SN9) Protein transport protein Sec61 alpha subunit isoform A| Length = 475 Score = 160 bits (406), Expect = 1e-39 Identities = 78/116 (67%), Positives = 97/116 (83%) Frame = +3 Query: 117 GFRVLHLVRPFLAFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADP 296 G + L +++PF A LPE+Q +RKI FREKV++T I+LFIFLVC Q+PL+GI S+ ADP Sbjct: 1 GIKFLEVIKPFCAVLPEIQKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSADP 60 Query: 297 FYWMRVILASNRGTVMELGITPIVTSGMVMQLLVGSKIIEVXHSVREDRALLNGAQ 464 FYWMRVILASNRGT+MELGI+PIVTSG++MQLL G+KIIEV + + DRAL NGAQ Sbjct: 61 FYWMRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDTPK-DRALFNGAQ 115
>SC61A_PAGBO (Q8AY36) Protein transport protein Sec61 alpha subunit| Length = 475 Score = 160 bits (405), Expect = 2e-39 Identities = 78/116 (67%), Positives = 96/116 (82%) Frame = +3 Query: 117 GFRVLHLVRPFLAFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADP 296 G + L ++PF A LPE+Q +RKI FREKV++T I+LFIFLVC Q+PL+GI S+ ADP Sbjct: 1 GIKFLEFIKPFCAVLPEIQKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSADP 60 Query: 297 FYWMRVILASNRGTVMELGITPIVTSGMVMQLLVGSKIIEVXHSVREDRALLNGAQ 464 FYWMRVILASNRGT+MELGI+PIVTSG++MQLL G+KIIEV + + DRAL NGAQ Sbjct: 61 FYWMRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDTPK-DRALFNGAQ 115
>SC61A_NOTAN (Q8AY35) Protein transport protein Sec61 alpha subunit| Length = 475 Score = 160 bits (405), Expect = 2e-39 Identities = 78/116 (67%), Positives = 96/116 (82%) Frame = +3 Query: 117 GFRVLHLVRPFLAFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADP 296 G + L ++PF A LPE+Q +RKI FREKV++T I+LFIFLVC Q+PL+GI S+ ADP Sbjct: 1 GIKFLEFIKPFCAVLPEIQKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSADP 60 Query: 297 FYWMRVILASNRGTVMELGITPIVTSGMVMQLLVGSKIIEVXHSVREDRALLNGAQ 464 FYWMRVILASNRGT+MELGI+PIVTSG++MQLL G+KIIEV + + DRAL NGAQ Sbjct: 61 FYWMRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDTPK-DRALFNGAQ 115
>SC61A_BOVVA (Q8AY31) Protein transport protein Sec61 alpha subunit| Length = 475 Score = 160 bits (404), Expect = 2e-39 Identities = 78/116 (67%), Positives = 95/116 (81%) Frame = +3 Query: 117 GFRVLHLVRPFLAFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADP 296 G + L ++PF A LPE+Q +RKI FREKV++T I+LFIFLVC Q+PL+GI S+ ADP Sbjct: 1 GIKFLEFIKPFCAVLPEIQKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSADP 60 Query: 297 FYWMRVILASNRGTVMELGITPIVTSGMVMQLLVGSKIIEVXHSVREDRALLNGAQ 464 FYWMRVILASNRGT+MELGI PIVTSG++MQLL G+KIIEV + + DRAL NGAQ Sbjct: 61 FYWMRVILASNRGTLMELGIAPIVTSGLIMQLLAGAKIIEVGDTPK-DRALFNGAQ 115
>SC61A_HALRO (Q25147) Protein transport protein Sec61 alpha subunit| Length = 475 Score = 159 bits (403), Expect = 3e-39 Identities = 76/116 (65%), Positives = 96/116 (82%) Frame = +3 Query: 117 GFRVLHLVRPFLAFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADP 296 GF+ L +++PF LPE++ RKI FREKV++T I+LFIFLVC Q+PL+GI S+ ADP Sbjct: 2 GFKFLEVIKPFCIILPEIEKPQRKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSESADP 61 Query: 297 FYWMRVILASNRGTVMELGITPIVTSGMVMQLLVGSKIIEVXHSVREDRALLNGAQ 464 FYWMRVI+ASNRGT+MELGITPIVTSG++MQLL G+K+IEV + + DRAL NGAQ Sbjct: 62 FYWMRVIMASNRGTLMELGITPIVTSGLIMQLLAGAKLIEVGDTPK-DRALFNGAQ 116
>SC61A_BORSA (Q8AY33) Protein transport protein Sec61 alpha subunit| Length = 475 Score = 159 bits (402), Expect = 4e-39 Identities = 78/116 (67%), Positives = 96/116 (82%) Frame = +3 Query: 117 GFRVLHLVRPFLAFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADP 296 G + L +++PF A LPE+Q +RKI FREKV++T I+LFIFLVC Q+PL+GI S+ ADP Sbjct: 1 GIKFLEVIKPFCAVLPEIQKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSADP 60 Query: 297 FYWMRVILASNRGTVMELGITPIVTSGMVMQLLVGSKIIEVXHSVREDRALLNGAQ 464 FYWMRVILASNRGT+MELGI+PIVTS ++MQLL G+KIIEV S + DRAL NGAQ Sbjct: 61 FYWMRVILASNRGTLMELGISPIVTSDLIMQLLAGAKIIEVGDSPK-DRALFNGAQ 115
>S61A1_BRARE (Q90ZM2) Protein transport protein Sec61 alpha subunit isoform A| Length = 475 Score = 158 bits (400), Expect = 6e-39 Identities = 77/114 (67%), Positives = 96/114 (84%) Frame = +3 Query: 123 RVLHLVRPFLAFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADPFY 302 + L +++PF A LPE+Q +RKI FREKV++T I+LFIFLVC Q+PL+GI S+ ADPFY Sbjct: 3 KFLEVIKPFCAVLPEIQKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSADPFY 62 Query: 303 WMRVILASNRGTVMELGITPIVTSGMVMQLLVGSKIIEVXHSVREDRALLNGAQ 464 WMRVILASNRGT+MELGI+PIVTSG++MQLL G+KIIEV + + DRAL NGAQ Sbjct: 63 WMRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDTPK-DRALFNGAQ 115
>SC61A_HEMAM (Q8AY34) Protein transport protein Sec61 alpha subunit| Length = 475 Score = 158 bits (399), Expect = 8e-39 Identities = 77/116 (66%), Positives = 96/116 (82%) Frame = +3 Query: 117 GFRVLHLVRPFLAFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADP 296 G + L +++PF A LPE+Q +RKI FREKV++T I+LFIFLVC Q+PL+GI S+ ADP Sbjct: 1 GIKFLEVIKPFCAVLPEIQKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSADP 60 Query: 297 FYWMRVILASNRGTVMELGITPIVTSGMVMQLLVGSKIIEVXHSVREDRALLNGAQ 464 FYWMRVILASNRGT+MELGI+PIVTSG++MQLL G+KII V + + DRAL NGAQ Sbjct: 61 FYWMRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIGVGDTPK-DRALFNGAQ 115
>S61A1_RAT (P61621) Protein transport protein Sec61 alpha subunit isoform 1| (Sec61 alpha-1) Length = 475 Score = 156 bits (394), Expect = 3e-38 Identities = 75/114 (65%), Positives = 95/114 (83%) Frame = +3 Query: 123 RVLHLVRPFLAFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADPFY 302 + L +++PF LPE+Q +RKI F+EKV++T I+LFIFLVC Q+PL+GI S+ ADPFY Sbjct: 3 KFLEVIKPFCVILPEIQKPERKIQFKEKVLWTAITLFIFLVCCQIPLFGIMSSDSADPFY 62 Query: 303 WMRVILASNRGTVMELGITPIVTSGMVMQLLVGSKIIEVXHSVREDRALLNGAQ 464 WMRVILASNRGT+MELGI+PIVTSG++MQLL G+KIIEV + + DRAL NGAQ Sbjct: 63 WMRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDTPK-DRALFNGAQ 115
>S61A1_PONPY (Q5R5L5) Protein transport protein Sec61 alpha subunit isoform 1| (Sec61 alpha-1) Length = 475 Score = 156 bits (394), Expect = 3e-38 Identities = 75/114 (65%), Positives = 95/114 (83%) Frame = +3 Query: 123 RVLHLVRPFLAFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADPFY 302 + L +++PF LPE+Q +RKI F+EKV++T I+LFIFLVC Q+PL+GI S+ ADPFY Sbjct: 3 KFLEVIKPFCVILPEIQKPERKIQFKEKVLWTAITLFIFLVCCQIPLFGIMSSDSADPFY 62 Query: 303 WMRVILASNRGTVMELGITPIVTSGMVMQLLVGSKIIEVXHSVREDRALLNGAQ 464 WMRVILASNRGT+MELGI+PIVTSG++MQLL G+KIIEV + + DRAL NGAQ Sbjct: 63 WMRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDTPK-DRALFNGAQ 115
>S61A1_MOUSE (P61620) Protein transport protein Sec61 alpha subunit isoform 1| (Sec61 alpha-1) Length = 475 Score = 156 bits (394), Expect = 3e-38 Identities = 75/114 (65%), Positives = 95/114 (83%) Frame = +3 Query: 123 RVLHLVRPFLAFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADPFY 302 + L +++PF LPE+Q +RKI F+EKV++T I+LFIFLVC Q+PL+GI S+ ADPFY Sbjct: 3 KFLEVIKPFCVILPEIQKPERKIQFKEKVLWTAITLFIFLVCCQIPLFGIMSSDSADPFY 62 Query: 303 WMRVILASNRGTVMELGITPIVTSGMVMQLLVGSKIIEVXHSVREDRALLNGAQ 464 WMRVILASNRGT+MELGI+PIVTSG++MQLL G+KIIEV + + DRAL NGAQ Sbjct: 63 WMRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDTPK-DRALFNGAQ 115
>S61A1_HUMAN (P61619) Protein transport protein Sec61 alpha subunit isoform 1| (Sec61 alpha-1) Length = 475 Score = 156 bits (394), Expect = 3e-38 Identities = 75/114 (65%), Positives = 95/114 (83%) Frame = +3 Query: 123 RVLHLVRPFLAFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADPFY 302 + L +++PF LPE+Q +RKI F+EKV++T I+LFIFLVC Q+PL+GI S+ ADPFY Sbjct: 3 KFLEVIKPFCVILPEIQKPERKIQFKEKVLWTAITLFIFLVCCQIPLFGIMSSDSADPFY 62 Query: 303 WMRVILASNRGTVMELGITPIVTSGMVMQLLVGSKIIEVXHSVREDRALLNGAQ 464 WMRVILASNRGT+MELGI+PIVTSG++MQLL G+KIIEV + + DRAL NGAQ Sbjct: 63 WMRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDTPK-DRALFNGAQ 115
>S61A1_CANFA (P38377) Protein transport protein Sec61 alpha subunit isoform 1| (Sec61 alpha-1) Length = 475 Score = 156 bits (394), Expect = 3e-38 Identities = 75/114 (65%), Positives = 95/114 (83%) Frame = +3 Query: 123 RVLHLVRPFLAFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADPFY 302 + L +++PF LPE+Q +RKI F+EKV++T I+LFIFLVC Q+PL+GI S+ ADPFY Sbjct: 3 KFLEVIKPFCVILPEIQKPERKIQFKEKVLWTAITLFIFLVCCQIPLFGIMSSDSADPFY 62 Query: 303 WMRVILASNRGTVMELGITPIVTSGMVMQLLVGSKIIEVXHSVREDRALLNGAQ 464 WMRVILASNRGT+MELGI+PIVTSG++MQLL G+KIIEV + + DRAL NGAQ Sbjct: 63 WMRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDTPK-DRALFNGAQ 115
>S61A2_BRARE (Q90YL4) Protein transport protein Sec61 alpha subunit isoform B| Length = 475 Score = 155 bits (392), Expect = 5e-38 Identities = 74/114 (64%), Positives = 96/114 (84%) Frame = +3 Query: 123 RVLHLVRPFLAFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADPFY 302 + L +++PF A LPE+Q +R+I F+EKV++T I+LFIFLVC Q+PL+GI S+ ADPFY Sbjct: 3 KFLEVIKPFCAVLPEIQKPERRIQFKEKVLWTAITLFIFLVCCQIPLFGIMSSDSADPFY 62 Query: 303 WMRVILASNRGTVMELGITPIVTSGMVMQLLVGSKIIEVXHSVREDRALLNGAQ 464 WMRVI+ASNRGT+MELGI+PIVTSG++MQLL G+KIIEV + + DRAL NGAQ Sbjct: 63 WMRVIMASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDTPK-DRALFNGAQ 115
>SC61A_PYRSA (P38379) Protein transport protein Sec61 alpha subunit| Length = 494 Score = 155 bits (391), Expect = 7e-38 Identities = 74/116 (63%), Positives = 93/116 (80%) Frame = +3 Query: 117 GFRVLHLVRPFLAFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADP 296 G R L LV+PF+ LPEV SA +KIP EK+++T I +F++LVC Q+PLYGI +T +DP Sbjct: 5 GVRFLTLVKPFMFALPEVSSATKKIPVNEKLLWTSIVVFLYLVCCQIPLYGITNTKSSDP 64 Query: 297 FYWMRVILASNRGTVMELGITPIVTSGMVMQLLVGSKIIEVXHSVREDRALLNGAQ 464 FYWMRVILASN+GT+MELGI+PIVTSG+VMQLL GSKII+V +ED+ L GAQ Sbjct: 65 FYWMRVILASNKGTLMELGISPIVTSGLVMQLLAGSKIIDVDQGTKEDKTLFQGAQ 120
>SC61A_YARLI (P78979) Protein transport protein SEC61 alpha subunit| Length = 471 Score = 141 bits (355), Expect = 1e-33 Identities = 66/116 (56%), Positives = 92/116 (79%) Frame = +3 Query: 117 GFRVLHLVRPFLAFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADP 296 G R L LV+PF FLPEVQ+ +RK+PF +K+++T ++L IFLV S++PLYGI+S+ +D Sbjct: 3 GVRFLDLVKPFTPFLPEVQAPERKVPFNQKIMWTAVTLMIFLVMSEIPLYGINSSDKSDA 62 Query: 297 FYWMRVILASNRGTVMELGITPIVTSGMVMQLLVGSKIIEVXHSVREDRALLNGAQ 464 YW+R++LASNRG++MELGITPIV+SGMV QLL G+++IEV ++ DR L AQ Sbjct: 63 LYWLRMMLASNRGSLMELGITPIVSSGMVFQLLGGTQLIEVNMDLKSDRELYQTAQ 118
>SC61A_CANAL (Q9P8E3) Protein transport protein SEC61 alpha subunit| Length = 479 Score = 138 bits (347), Expect = 9e-33 Identities = 66/116 (56%), Positives = 91/116 (78%) Frame = +3 Query: 117 GFRVLHLVRPFLAFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADP 296 GFRVL LV+PF FLPEV + +RK+ F+++V++T+I+L IFLV S++PLYGI S+ +DP Sbjct: 3 GFRVLDLVKPFSPFLPEVIAPERKVQFQQRVMWTIITLLIFLVMSEIPLYGIASSDSSDP 62 Query: 297 FYWMRVILASNRGTVMELGITPIVTSGMVMQLLVGSKIIEVXHSVREDRALLNGAQ 464 +W+R++LASNRGT+MELGI+PIV+SGM+ QLL G+KII V + DR AQ Sbjct: 63 LFWLRMMLASNRGTLMELGISPIVSSGMLFQLLQGTKIIHVDMQNKNDRETFQTAQ 118
>SC61A_DEBHA (Q6BN08) Protein transport protein SEC61 alpha subunit| Length = 479 Score = 137 bits (345), Expect = 1e-32 Identities = 65/116 (56%), Positives = 92/116 (79%) Frame = +3 Query: 117 GFRVLHLVRPFLAFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADP 296 GFRVL LV+PF F+PEV + +RK+ F++++++T ++L IFLV S++PLYGI S+ G+DP Sbjct: 3 GFRVLDLVKPFTPFMPEVIAPERKVAFQQRLMWTGVTLLIFLVMSEIPLYGIASSDGSDP 62 Query: 297 FYWMRVILASNRGTVMELGITPIVTSGMVMQLLVGSKIIEVXHSVREDRALLNGAQ 464 YW+R++LASNRGT+MELGI+PIV++GMV QLL G+K+I V S + DR AQ Sbjct: 63 LYWLRMMLASNRGTLMELGISPIVSAGMVFQLLQGTKLITVDMSNKNDRDQFQTAQ 118
>SC61A_NEUCR (Q870W0) Protein transport protein SEC61 alpha subunit| Length = 476 Score = 136 bits (343), Expect = 2e-32 Identities = 65/114 (57%), Positives = 89/114 (78%) Frame = +3 Query: 123 RVLHLVRPFLAFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADPFY 302 R L LV+PF+ FLPEVQ + KIPF +K+++T ++L IFLV SQ+PLYGI S+ +DP Y Sbjct: 5 RFLDLVKPFVPFLPEVQQPETKIPFNQKLMWTGLTLLIFLVMSQMPLYGIVSSDTSDPLY 64 Query: 303 WMRVILASNRGTVMELGITPIVTSGMVMQLLVGSKIIEVXHSVREDRALLNGAQ 464 W+R+++ASNRGT+MELGITPI++SGMV QLL G+ +I+V ++ DR L AQ Sbjct: 65 WLRMMMASNRGTLMELGITPIISSGMVFQLLAGTHMIDVNLDLKADRELYQTAQ 118
>SC61A_SCHPO (P79088) Protein transport protein sec61 alpha subunit| Length = 479 Score = 135 bits (339), Expect = 7e-32 Identities = 62/109 (56%), Positives = 89/109 (81%) Frame = +3 Query: 123 RVLHLVRPFLAFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADPFY 302 R L LV+PF FLPE+ + +RK+PF++K+++T ++L IFLV SQ+PLYGI S+ +DP Sbjct: 5 RFLDLVKPFAPFLPEIAAPERKVPFKQKMLWTGVTLLIFLVMSQVPLYGIVSSDSSDPLL 64 Query: 303 WMRVILASNRGTVMELGITPIVTSGMVMQLLVGSKIIEVXHSVREDRAL 449 W+R+ILA+NRGT+MELGI+PIVTS M++QLLVGS++IEV ++ DR + Sbjct: 65 WLRMILAANRGTLMELGISPIVTSSMLVQLLVGSQLIEVNMELKSDREM 113
>SC61A_CANGA (Q6FRY3) Protein transport protein SEC61 alpha subunit| Length = 479 Score = 132 bits (333), Expect = 4e-31 Identities = 62/114 (54%), Positives = 86/114 (75%) Frame = +3 Query: 123 RVLHLVRPFLAFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADPFY 302 R+L L +PF AFLPEV S +RK+P+ +K+I+T +SL IFLV Q+PLYGI S +DP Y Sbjct: 4 RILSLFKPFEAFLPEVISPERKVPYNQKLIWTGVSLLIFLVLGQIPLYGIVSAETSDPLY 63 Query: 303 WMRVILASNRGTVMELGITPIVTSGMVMQLLVGSKIIEVXHSVREDRALLNGAQ 464 W+R +LASNRGT+MELG++PI+TS M+ Q L G+++++V +EDR L AQ Sbjct: 64 WLRAMLASNRGTLMELGVSPIITSSMIFQFLQGTQLLQVSLDSKEDRELYQIAQ 117
>SC61A_ASHGO (Q752H7) Protein transport protein SEC61 alpha subunit| Length = 480 Score = 131 bits (329), Expect = 1e-30 Identities = 60/114 (52%), Positives = 87/114 (76%) Frame = +3 Query: 123 RVLHLVRPFLAFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADPFY 302 R+L L +PF AFLPEV + +RK+P+ +K+I+T +SL IFLV Q+PLYGI S+ G+DP Sbjct: 4 RLLDLFKPFEAFLPEVIAPERKVPYNQKLIWTAVSLLIFLVLGQIPLYGIVSSEGSDPLQ 63 Query: 303 WMRVILASNRGTVMELGITPIVTSGMVMQLLVGSKIIEVXHSVREDRALLNGAQ 464 W+R +LASNRGT+MELG++PI+TS M+ Q L G+++++V ++DR L AQ Sbjct: 64 WLRAMLASNRGTLMELGVSPIITSSMIFQFLQGTQLLQVNLESKQDRELFQIAQ 117
>SC61A_HANAN (Q96TW8) Protein transport protein SEC61 alpha subunit| Length = 479 Score = 131 bits (329), Expect = 1e-30 Identities = 61/115 (53%), Positives = 89/115 (77%) Frame = +3 Query: 120 FRVLHLVRPFLAFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADPF 299 FRVL LV+P +LPEV + +RK+PF +K+++T ++L IFLV S++PLYGI S+ +DP Sbjct: 4 FRVLDLVKPLTGYLPEVIAPERKVPFNQKLMWTGVTLLIFLVMSEIPLYGIVSSESSDPL 63 Query: 300 YWMRVILASNRGTVMELGITPIVTSGMVMQLLVGSKIIEVXHSVREDRALLNGAQ 464 +W+R++LASNRGT+MELGI+PIV+SGMV QLL G+++++V + DR AQ Sbjct: 64 FWLRMMLASNRGTLMELGISPIVSSGMVFQLLQGTQLLDVNLESKTDRETFQTAQ 118
>SC61A_YEAST (P32915) Protein transport protein SEC61 alpha subunit| Length = 480 Score = 128 bits (322), Expect = 7e-30 Identities = 57/114 (50%), Positives = 87/114 (76%) Frame = +3 Query: 123 RVLHLVRPFLAFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADPFY 302 RVL L +PF +FLPEV + +RK+P+ +K+I+T +SL IFL+ Q+PLYGI S+ +DP Y Sbjct: 5 RVLDLFKPFESFLPEVIAPERKVPYNQKLIWTGVSLLIFLILGQIPLYGIVSSETSDPLY 64 Query: 303 WMRVILASNRGTVMELGITPIVTSGMVMQLLVGSKIIEVXHSVREDRALLNGAQ 464 W+R +LASNRGT++ELG++PI+TS M+ Q L G++++++ ++DR L AQ Sbjct: 65 WLRAMLASNRGTLLELGVSPIITSSMIFQFLQGTQLLQIRPESKQDRELFQIAQ 118
>SC61A_KLULA (Q6CPY9) Protein transport protein SEC61 alpha subunit| Length = 480 Score = 127 bits (320), Expect = 1e-29 Identities = 58/114 (50%), Positives = 87/114 (76%) Frame = +3 Query: 123 RVLHLVRPFLAFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADPFY 302 RVL L +PF A+LPEV + +R +P+++K+I+T +SL +FLV Q+PLYGI S+ +DP Y Sbjct: 4 RVLDLFKPFEAYLPEVIAPERPVPYKQKLIWTGVSLLVFLVLGQIPLYGIVSSETSDPLY 63 Query: 303 WMRVILASNRGTVMELGITPIVTSGMVMQLLVGSKIIEVXHSVREDRALLNGAQ 464 W+R +LASNRGT+MELG++PI+TS M+ Q L G+++++V ++DR L AQ Sbjct: 64 WLRAMLASNRGTLMELGVSPIITSSMIFQFLQGTQLLQVNMENKQDRELYQIAQ 117
>SECY_METTH (O26134) Preprotein translocase secY subunit (Protein transport| protein SEC61 alpha subunit homolog) Length = 456 Score = 91.7 bits (226), Expect = 9e-19 Identities = 45/107 (42%), Positives = 70/107 (65%) Frame = +3 Query: 144 PFLAFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADPFYWMRVILA 323 P + LP+V+S ++PFREK+ +T I L ++ +Q+PLYG+ S D F R +LA Sbjct: 10 PLFSVLPQVKSPGYRVPFREKLKWTGIILVLYFFLAQIPLYGL-SANAVDQFAQFRAVLA 68 Query: 324 SNRGTVMELGITPIVTSGMVMQLLVGSKIIEVXHSVREDRALLNGAQ 464 N G+++ LGI PIV++ +++QLLVG KI+++ S ED+A G Q Sbjct: 69 GNFGSILTLGIGPIVSASIILQLLVGGKILKLDLSRHEDKAFFQGLQ 115
>SSH1_YEAST (P38353) Sec sixty-one protein homolog| Length = 490 Score = 89.7 bits (221), Expect = 3e-18 Identities = 43/114 (37%), Positives = 72/114 (63%), Gaps = 3/114 (2%) Frame = +3 Query: 117 GFRVLHLVRPFLAFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGA-- 290 GFR++ +V+P L LPEV+ K+PF +K++YT+ + I+L +Q PL G+ T Sbjct: 3 GFRLIDIVKPILPILPEVELPFEKLPFDDKIVYTIFAGLIYLF-AQFPLVGLPKATTPNV 61 Query: 291 -DPFYWMRVILASNRGTVMELGITPIVTSGMVMQLLVGSKIIEVXHSVREDRAL 449 DP Y++R + T++E G+ P ++SG+++QLL G K+I+V ++ DR L Sbjct: 62 NDPIYFLRGVFGCEPRTLLEFGLFPNISSGLILQLLAGLKVIKVNFKIQSDREL 115
>SECY_PYRFU (Q8U019) Preprotein translocase secY subunit (Protein transport| protein SEC61 alpha subunit homolog) Length = 468 Score = 86.3 bits (212), Expect = 4e-17 Identities = 41/103 (39%), Positives = 70/103 (67%) Frame = +3 Query: 156 FLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADPFYWMRVILASNRG 335 + PEV+ R++P RE+ ++T ++L ++ V +++P+YGI D F ++RV+LA G Sbjct: 13 WFPEVERPKRRVPLRERFMWTGVALILYYVLAEIPVYGIPERI-QDYFQFLRVVLAGRNG 71 Query: 336 TVMELGITPIVTSGMVMQLLVGSKIIEVXHSVREDRALLNGAQ 464 +++ LGI PIVT+G+++QLLVGS+II++ + EDR Q Sbjct: 72 SILTLGIGPIVTAGIILQLLVGSEIIKLDLANPEDRRFYQALQ 114
>SECY_PYRAB (Q9V1V8) Preprotein translocase secY subunit (Protein transport| protein SEC61 alpha subunit homolog) Length = 468 Score = 83.6 bits (205), Expect = 3e-16 Identities = 40/103 (38%), Positives = 69/103 (66%) Frame = +3 Query: 156 FLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADPFYWMRVILASNRG 335 + PEV+ + +P +EK ++T ++L ++ V +++P+YGI D F ++RV+LA G Sbjct: 13 WFPEVERPKKHVPLKEKFMWTGLALILYYVLAEIPVYGIPERI-QDYFQFLRVVLAGRNG 71 Query: 336 TVMELGITPIVTSGMVMQLLVGSKIIEVXHSVREDRALLNGAQ 464 +++ LGI PIVT+G+++QLLVGS+II++ + EDR Q Sbjct: 72 SILTLGIGPIVTAGIILQLLVGSEIIKLDLANPEDRRFYQALQ 114
>SECY_PYRHO (O59442) Preprotein translocase secY subunit (Protein transport| protein SEC61 alpha subunit homolog) Length = 468 Score = 82.8 bits (203), Expect = 4e-16 Identities = 39/103 (37%), Positives = 68/103 (66%) Frame = +3 Query: 156 FLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADPFYWMRVILASNRG 335 + PEV+ + +P +EK ++T ++L ++ V +++P+YGI D F ++RV+LA G Sbjct: 13 WFPEVERPKKHVPLKEKFVWTGLALVLYYVLAEIPVYGIPKKI-QDYFQFLRVVLAGRNG 71 Query: 336 TVMELGITPIVTSGMVMQLLVGSKIIEVXHSVREDRALLNGAQ 464 +++ LGI PIVT+G+++QLLVGS++I + + EDR Q Sbjct: 72 SILTLGIGPIVTAGIILQLLVGSELIRLDLANPEDRRFYQALQ 114
>SECY_SULAC (P49978) Preprotein translocase secY subunit (Protein transport| protein SEC61 alpha subunit homolog) Length = 463 Score = 77.8 bits (190), Expect = 1e-14 Identities = 38/103 (36%), Positives = 65/103 (63%), Gaps = 1/103 (0%) Frame = +3 Query: 159 LPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTG-ADPFYWMRVILASNRG 335 LP V K K+++T I L ++L+ + +PLYG+ S+ F ++I AS++G Sbjct: 14 LPAVSKPKDKPTLTRKLLWTFIGLIVYLLMASIPLYGVTSSNSFLSNFLAQQIIFASSQG 73 Query: 336 TVMELGITPIVTSGMVMQLLVGSKIIEVXHSVREDRALLNGAQ 464 T+ +LGI P++TSG++MQ+LVGSK+I V + +E ++ A+ Sbjct: 74 TLAQLGIGPVITSGLIMQILVGSKLINVDLTTQEGKSKFTQAE 116
>SECY_METJA (Q60175) Preprotein translocase secY subunit (Protein transport| protein SEC61 alpha subunit homolog) Length = 436 Score = 77.4 bits (189), Expect = 2e-14 Identities = 44/107 (41%), Positives = 68/107 (63%) Frame = +3 Query: 144 PFLAFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADPFYWMRVILA 323 P L +PEV+ ++I F+EK+ +T I L ++ + + +Y + A +W + I A Sbjct: 6 PILEKIPEVELPVKEITFKEKLKWTGIVLVLYFIMGCIDVYTAGAQIPAIFEFW-QTITA 64 Query: 324 SNRGTVMELGITPIVTSGMVMQLLVGSKIIEVXHSVREDRALLNGAQ 464 S GT++ LGI PIVT+G++MQLLVGS II++ S+ E+RAL G Q Sbjct: 65 SRIGTLITLGIGPIVTAGIIMQLLVGSGIIQMDLSIPENRALFQGCQ 111
>SECY_SULSO (Q9UX84) Preprotein translocase secY subunit (Protein transport| protein SEC61 alpha subunit homolog) Length = 469 Score = 75.9 bits (185), Expect = 5e-14 Identities = 36/103 (34%), Positives = 63/103 (61%) Frame = +3 Query: 156 FLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADPFYWMRVILASNRG 335 +LP V K +K++++++++ I+L+ + PLYGI S + ++I AS G Sbjct: 13 YLPAVTKPKEKPSLGQKLVWSLVAVIIYLIMASTPLYGITSASFFKNLILEQIIFASTTG 72 Query: 336 TVMELGITPIVTSGMVMQLLVGSKIIEVXHSVREDRALLNGAQ 464 T+ +LGI PI+T+G++MQ+L GSK+I + + +DR AQ Sbjct: 73 TLAQLGIGPIITAGLIMQILAGSKLISIDLNDPDDRVKFTEAQ 115
>SECY_METVA (P28541) Preprotein translocase secY subunit (Protein transport| protein SEC61 alpha subunit homolog) Length = 438 Score = 73.9 bits (180), Expect = 2e-13 Identities = 39/109 (35%), Positives = 67/109 (61%) Frame = +3 Query: 138 VRPFLAFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADPFYWMRVI 317 ++P L +PEV+ + + F+EK+ +T + L ++ + + +Y + A +W + + Sbjct: 3 IKPILELIPEVKRPLKGVSFKEKIQWTGLVLILYFILGTIDIYMGGAEMPAMFAFW-QTV 61 Query: 318 LASNRGTVMELGITPIVTSGMVMQLLVGSKIIEVXHSVREDRALLNGAQ 464 AS GT++ LGI PIVT+G++MQLLVGS++I + S +RAL G Q Sbjct: 62 TASKMGTLITLGIGPIVTAGIIMQLLVGSELISLDLSKPMNRALFQGLQ 110
>SECY_AERPE (Q9YDD0) Preprotein translocase secY subunit (Protein transport| protein SEC61 alpha subunit homolog) Length = 494 Score = 72.0 bits (175), Expect = 8e-13 Identities = 38/101 (37%), Positives = 60/101 (59%) Frame = +3 Query: 162 PEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADPFYWMRVILASNRGTV 341 P V+ +RK ++ +T + L ++ + S +PLYGI R+I AS+ GT+ Sbjct: 52 PAVRKPERKPTLYRRLAWTGVILVLYFIMSNIPLYGIPPQNIGGQVDLQRIIFASSAGTL 111 Query: 342 MELGITPIVTSGMVMQLLVGSKIIEVXHSVREDRALLNGAQ 464 MELGI PIVT+ +++Q+LVG+KII++ + E R AQ Sbjct: 112 MELGIGPIVTASLIIQVLVGAKIIKLDLADPEGRRKFTSAQ 152
>SECY_ARCFU (O28377) Preprotein translocase secY subunit (Protein transport| protein SEC61 alpha subunit homolog) Length = 493 Score = 71.6 bits (174), Expect = 1e-12 Identities = 37/107 (34%), Positives = 65/107 (60%) Frame = +3 Query: 126 VLHLVRPFLAFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADPFYW 305 V+ ++P+ +P V+ + FREK +T L ++ + S +P++G+ S D F Sbjct: 4 VIRALQPYFERIPSVERPKGHVHFREKFGWTAAILLLYFILSNVPVFGL-SPESIDIFAA 62 Query: 306 MRVILASNRGTVMELGITPIVTSGMVMQLLVGSKIIEVXHSVREDRA 446 R + A + G+++ LGI PIVT+ +++QLLVG+ II++ + EDRA Sbjct: 63 YRALFAGSTGSIIALGIGPIVTASIILQLLVGAGIIKLDLTNPEDRA 109
>SECY_HALSA (Q9HPB1) Preprotein translocase secY subunit (Protein transport| protein SEC61 alpha subunit homolog) Length = 491 Score = 70.5 bits (171), Expect = 2e-12 Identities = 40/108 (37%), Positives = 65/108 (60%), Gaps = 1/108 (0%) Frame = +3 Query: 144 PFLAFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADPFYWMRVILA 323 P L +P V+ + +PFR K+ +T L ++ + +PL+GI T G D F R +LA Sbjct: 9 PVLTRMPAVERPEGHVPFRRKMYWTGGVLVLYFFLTNVPLWGIQ-TAGNDFFGQFRSLLA 67 Query: 324 SNRGTVMELGITPIVTSGMVMQLLVGSKIIEV-XHSVREDRALLNGAQ 464 +GTV++LGI PIVT+ +V+QLL G+ ++ + + D+A+ G Q Sbjct: 68 GGQGTVLQLGIGPIVTASIVLQLLGGANLLGLDTDNDPRDQAIYQGLQ 115
>SECY_HALVO (Q977V3) Preprotein translocase secY subunit (Protein transport| protein SEC61 alpha subunit homolog) Length = 488 Score = 66.2 bits (160), Expect = 4e-11 Identities = 38/112 (33%), Positives = 64/112 (57%), Gaps = 1/112 (0%) Frame = +3 Query: 144 PFLAFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADPFYWMRVILA 323 P L+ +P V + +PFR K+ +T L ++ + + L+G+ + T D F R ILA Sbjct: 9 PVLSRMPAVARPEGHVPFRRKLGWTGGILVLYFFLTNVTLFGLDAATANDLFGQFRSILA 68 Query: 324 SNRGTVMELGITPIVTSGMVMQLLVGSKIIEV-XHSVREDRALLNGAQSCWV 476 +G+V++LGI PIVT+ +V+QLL G+ ++ + + D+ L G Q V Sbjct: 69 GQQGSVLQLGIGPIVTASIVLQLLGGADLLGLDTDNNPRDQVLYQGLQKLLV 120
>YGMH_SCHPO (O42965) Hypothetical protein C19G7.17 in chromosome II| Length = 475 Score = 65.1 bits (157), Expect = 9e-11 Identities = 35/117 (29%), Positives = 59/117 (50%) Frame = +3 Query: 114 GGFRVLHLVRPFLAFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGAD 293 GG R ++ ++P + LPEV+ + EK+ + + ++ + S +P+YG T D Sbjct: 2 GGARFINFIKPLSSLLPEVEGPKTHLELVEKLGWMAGCVVVYQILSIIPVYGAEKTDTLD 61 Query: 294 PFYWMRVILASNRGTVMELGITPIVTSGMVMQLLVGSKIIEVXHSVREDRALLNGAQ 464 P RV+ S+ +M G+ PI S ++Q+L K I V ++ DR L AQ Sbjct: 62 PINNFRVLDGSSASGLMITGLAPIYLSSFLLQILASKKKIAVNFNLIIDRVLFQNAQ 118
>SECY_HALMA (P28542) Preprotein translocase secY subunit (Protein transport| protein SEC61 alpha subunit homolog) Length = 487 Score = 63.2 bits (152), Expect = 4e-10 Identities = 36/112 (32%), Positives = 60/112 (53%), Gaps = 1/112 (0%) Frame = +3 Query: 144 PFLAFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADPFYWMRVILA 323 P L +P VQ + +PF+ K+ +T L ++ + + L+G+ F ILA Sbjct: 9 PLLVRMPAVQRPEGHVPFKRKLTWTGGVLLLYFFLTNVKLFGLDIDASQQVFGRFSSILA 68 Query: 324 SNRGTVMELGITPIVTSGMVMQLLVGSKIIEV-XHSVREDRALLNGAQSCWV 476 S +G++M+LGI PIVT+ +V+QLL G+ ++ + D+ L G Q V Sbjct: 69 SGQGSIMQLGIGPIVTASIVLQLLGGADLLGLNTQDDPRDQILYQGLQKLLV 120
>SECY_BACHD (P38375) Preprotein translocase secY subunit| Length = 430 Score = 35.4 bits (80), Expect = 0.078 Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 7/73 (9%) Frame = +3 Query: 198 REKVIYTVISLFIFLVCSQLPLYGIHSTT-----GADPFYWMRVILASNRG--TVMELGI 356 R KVI+T++ L +F + S +P+ G + A+ F ++ G ++ +GI Sbjct: 15 RRKVIFTLLMLIVFRIGSFIPVPGTNREVLDFVDQANAFGFLNTFGGGALGNFSIFAMGI 74 Query: 357 TPIVTSGMVMQLL 395 P +T+ +VMQLL Sbjct: 75 MPYITASIVMQLL 87
>SECY_AQUAE (O66491) Preprotein translocase secY subunit| Length = 429 Score = 33.9 bits (76), Expect = 0.23 Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 10/76 (13%) Frame = +3 Query: 198 REKVIYTVISLFIFLVCSQLPLYGIHSTTGAD--------PFYWMRVILASNRG--TVME 347 R+K I+T++ I+ + S +P+ GI+ D F + N G TV Sbjct: 15 RQKFIFTLLMFVIYRLGSHIPIPGINPEALRDFLKAFEGSVFALYDIFSGGNLGRLTVFA 74 Query: 348 LGITPIVTSGMVMQLL 395 LG+ P +++ ++MQLL Sbjct: 75 LGVMPYISASIMMQLL 90
>SECY_BUCAP (Q8K969) Preprotein translocase secY subunit| Length = 439 Score = 33.5 bits (75), Expect = 0.30 Identities = 23/83 (27%), Positives = 41/83 (49%), Gaps = 17/83 (20%) Frame = +3 Query: 198 REKVIYTVISLFIFLVCSQLPLYGIHSTTGADPFYWMRVILASNRGTVME---------- 347 ++++ VI+L IF + S +P+ GI +T + IL +GT++E Sbjct: 20 KQRIASVVIALIIFRIGSFIPIPGIDTTI-------LSRILNDQKGTIIEMFNMFSGGAL 72 Query: 348 -------LGITPIVTSGMVMQLL 395 LGI P ++S +++QLL Sbjct: 73 SRASIFALGIMPYISSSIIIQLL 95
>SECY_BUCAI (P57571) Preprotein translocase secY subunit| Length = 437 Score = 33.1 bits (74), Expect = 0.39 Identities = 19/77 (24%), Positives = 43/77 (55%), Gaps = 11/77 (14%) Frame = +3 Query: 198 REKVIYTVISLFIFLVCSQLPLYGIHST-----------TGADPFYWMRVILASNRGTVM 344 ++++++ ++++ +F + S +P+ GI +T T D F M A +R ++ Sbjct: 20 KQRIVFLIVAIIVFRIGSFIPIPGIDTTILSKILNNQNGTIVDMFN-MFSGGALSRASIF 78 Query: 345 ELGITPIVTSGMVMQLL 395 LGI P +++ +++QLL Sbjct: 79 ALGIMPYISASIIIQLL 95
>SECY_MYCPN (Q59548) Preprotein translocase secY subunit| Length = 477 Score = 32.7 bits (73), Expect = 0.51 Identities = 25/79 (31%), Positives = 43/79 (54%), Gaps = 8/79 (10%) Frame = +3 Query: 183 RKIPFREKVIYTVISLFIFLVCSQLPLYGIH-STTGADP----FYWMRVILAS---NRGT 338 R F + TV+ L +F V + +PL GI + TG D F+ + +L N+ + Sbjct: 24 RNRDFMISFLITVVLLVLFRVLAIIPLPGIQVNQTGLDQNSNDFFSLFNLLGGGGLNQLS 83 Query: 339 VMELGITPIVTSGMVMQLL 395 + +GI+P +++ +VMQLL Sbjct: 84 LFAVGISPYISAQIVMQLL 102
>FUS_MPV15 (P35949) Fusion glycoprotein F0 precursor [Contains: Fusion| glycoprotein F2; Fusion glycoprotein F1] Length = 537 Score = 32.7 bits (73), Expect = 0.51 Identities = 16/35 (45%), Positives = 21/35 (60%), Gaps = 10/35 (28%) Frame = +2 Query: 314 YSCI----KPWYCHGAG---YYP---NCDIWNGYA 388 Y+C+ WYCH AG Y+P +C+I NGYA Sbjct: 294 YACLARADNGWYCHNAGSLSYFPSPTDCEIHNGYA 328
>SECY_STAAW (Q7A086) Preprotein translocase secY subunit| Length = 430 Score = 32.3 bits (72), Expect = 0.66 Identities = 20/74 (27%), Positives = 35/74 (47%), Gaps = 8/74 (10%) Frame = +3 Query: 198 REKVIYTVISLFIFLVCSQLPLYGIHSTTGADPFYWMRVILASN--------RGTVMELG 353 R K+ +T+ L IF + + +P G++ +P N R ++ +G Sbjct: 15 RNKIFFTLAMLVIFKIGTYIPAPGVNPAAFDNPQGSQGATELLNTFGGGALKRFSIFAMG 74 Query: 354 ITPIVTSGMVMQLL 395 I P +T+ +VMQLL Sbjct: 75 IVPYITASIVMQLL 88
>SECY_STAAU (O08387) Preprotein translocase secY subunit| Length = 430 Score = 32.3 bits (72), Expect = 0.66 Identities = 20/74 (27%), Positives = 35/74 (47%), Gaps = 8/74 (10%) Frame = +3 Query: 198 REKVIYTVISLFIFLVCSQLPLYGIHSTTGADPFYWMRVILASN--------RGTVMELG 353 R K+ +T+ L IF + + +P G++ +P N R ++ +G Sbjct: 15 RNKIFFTLAMLVIFKIGTYIPAPGVNPAAFDNPQGSQGATELLNTFGGGALKRFSIFAMG 74 Query: 354 ITPIVTSGMVMQLL 395 I P +T+ +VMQLL Sbjct: 75 IVPYITASIVMQLL 88
>SECY_STAAS (Q6G791) Preprotein translocase secY subunit| Length = 430 Score = 32.3 bits (72), Expect = 0.66 Identities = 20/74 (27%), Positives = 35/74 (47%), Gaps = 8/74 (10%) Frame = +3 Query: 198 REKVIYTVISLFIFLVCSQLPLYGIHSTTGADPFYWMRVILASN--------RGTVMELG 353 R K+ +T+ L IF + + +P G++ +P N R ++ +G Sbjct: 15 RNKIFFTLAMLVIFKIGTYIPAPGVNPAAFDNPQGSQGATELLNTFGGGALKRFSIFAMG 74 Query: 354 ITPIVTSGMVMQLL 395 I P +T+ +VMQLL Sbjct: 75 IVPYITASIVMQLL 88
>SECY_STAAR (Q6GEK3) Preprotein translocase secY subunit| Length = 430 Score = 32.3 bits (72), Expect = 0.66 Identities = 20/74 (27%), Positives = 35/74 (47%), Gaps = 8/74 (10%) Frame = +3 Query: 198 REKVIYTVISLFIFLVCSQLPLYGIHSTTGADPFYWMRVILASN--------RGTVMELG 353 R K+ +T+ L IF + + +P G++ +P N R ++ +G Sbjct: 15 RNKIFFTLAMLVIFKIGTYIPAPGVNPAAFDNPQGSQGATELLNTFGGGALKRFSIFAMG 74 Query: 354 ITPIVTSGMVMQLL 395 I P +T+ +VMQLL Sbjct: 75 IVPYITASIVMQLL 88
>SECY_STAAN (Q7A468) Preprotein translocase secY subunit| Length = 430 Score = 32.3 bits (72), Expect = 0.66 Identities = 20/74 (27%), Positives = 35/74 (47%), Gaps = 8/74 (10%) Frame = +3 Query: 198 REKVIYTVISLFIFLVCSQLPLYGIHSTTGADPFYWMRVILASN--------RGTVMELG 353 R K+ +T+ L IF + + +P G++ +P N R ++ +G Sbjct: 15 RNKIFFTLAMLVIFKIGTYIPAPGVNPAAFDNPQGSQGATELLNTFGGGALKRFSIFAMG 74 Query: 354 ITPIVTSGMVMQLL 395 I P +T+ +VMQLL Sbjct: 75 IVPYITASIVMQLL 88
>SECY_STAAM (Q99S39) Preprotein translocase secY subunit| Length = 430 Score = 32.3 bits (72), Expect = 0.66 Identities = 20/74 (27%), Positives = 35/74 (47%), Gaps = 8/74 (10%) Frame = +3 Query: 198 REKVIYTVISLFIFLVCSQLPLYGIHSTTGADPFYWMRVILASN--------RGTVMELG 353 R K+ +T+ L IF + + +P G++ +P N R ++ +G Sbjct: 15 RNKIFFTLAMLVIFKIGTYIPAPGVNPAAFDNPQGSQGATELLNTFGGGALKRFSIFAMG 74 Query: 354 ITPIVTSGMVMQLL 395 I P +T+ +VMQLL Sbjct: 75 IVPYITASIVMQLL 88
>SECY_STAAC (Q5HDX8) Preprotein translocase secY subunit| Length = 430 Score = 32.3 bits (72), Expect = 0.66 Identities = 20/74 (27%), Positives = 35/74 (47%), Gaps = 8/74 (10%) Frame = +3 Query: 198 REKVIYTVISLFIFLVCSQLPLYGIHSTTGADPFYWMRVILASN--------RGTVMELG 353 R K+ +T+ L IF + + +P G++ +P N R ++ +G Sbjct: 15 RNKIFFTLAMLVIFKIGTYIPAPGVNPAAFDNPQGSQGATELLNTFGGGALKRFSIFAMG 74 Query: 354 ITPIVTSGMVMQLL 395 I P +T+ +VMQLL Sbjct: 75 IVPYITASIVMQLL 88
>SECY_BUCAK (P49976) Preprotein translocase secY subunit (Fragment)| Length = 356 Score = 32.3 bits (72), Expect = 0.66 Identities = 18/76 (23%), Positives = 40/76 (52%), Gaps = 10/76 (13%) Frame = +3 Query: 198 REKVIYTVISLFIFLVCSQLPLYGIHSTTGADPFYWMRVIL----------ASNRGTVME 347 + ++++ + +L +F + S +P+ GI +T A R + A +R ++ Sbjct: 20 KRRLLFVIGALIVFRIGSFIPIPGIDATVLAKLLEQQRGTIIEMFNMFSGGALSRASIFA 79 Query: 348 LGITPIVTSGMVMQLL 395 LGI P +++ +++QLL Sbjct: 80 LGIMPYISASIIIQLL 95
>LEU2_GLUOX (Q5FUG3) 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33)| (Isopropylmalate isomerase) (Alpha-IPM isomerase) (IPMI) Length = 475 Score = 32.0 bits (71), Expect = 0.87 Identities = 21/59 (35%), Positives = 29/59 (49%), Gaps = 5/59 (8%) Frame = +2 Query: 8 SSPRSVLPS*GSTPSPARGEAPAHLAGGVR-----GQEDGWRLSGAASGQAFLGFLAGS 169 +SP++VLP GS PSP+ PA A R G E G +++G F+G S Sbjct: 297 TSPQNVLPIDGSVPSPSDEPDPARAAQIQRALDYMGLEAGQKIAGTPVDVVFIGSCTNS 355
>SECY_STAES (Q8CNF3) Preprotein translocase secY subunit| Length = 430 Score = 32.0 bits (71), Expect = 0.87 Identities = 21/74 (28%), Positives = 36/74 (48%), Gaps = 8/74 (10%) Frame = +3 Query: 198 REKVIYTVISLFIFLVCSQLPLYGIH--------STTGADPFYWMRVILASNRGTVMELG 353 R K+ +T+ L IF + + +P G++ + GA A R ++ +G Sbjct: 15 RNKIFFTLAMLVIFKIGTYIPAPGVNPEAFNHPQGSQGATELLNTFGGGALKRFSIFAMG 74 Query: 354 ITPIVTSGMVMQLL 395 I P +T+ +VMQLL Sbjct: 75 IMPYITASIVMQLL 88
>SECY_STAEQ (Q5HM19) Preprotein translocase secY subunit| Length = 430 Score = 32.0 bits (71), Expect = 0.87 Identities = 21/74 (28%), Positives = 36/74 (48%), Gaps = 8/74 (10%) Frame = +3 Query: 198 REKVIYTVISLFIFLVCSQLPLYGIH--------STTGADPFYWMRVILASNRGTVMELG 353 R K+ +T+ L IF + + +P G++ + GA A R ++ +G Sbjct: 15 RNKIFFTLAMLVIFKIGTYIPAPGVNPEAFNHPQGSQGATELLNTFGGGALKRFSIFAMG 74 Query: 354 ITPIVTSGMVMQLL 395 I P +T+ +VMQLL Sbjct: 75 IMPYITASIVMQLL 88
>PSY_NEUCR (P37295) Phytoene synthase (EC 2.5.1.-) (Albino-2 protein)| Length = 602 Score = 32.0 bits (71), Expect = 0.87 Identities = 16/59 (27%), Positives = 32/59 (54%), Gaps = 3/59 (5%) Frame = +3 Query: 189 IPFREK---VIYTVISLFIFLVCSQLPLYGIHSTTGADPFYWMRVILASNRGTVMELGI 356 IPF E VI T I+ ++++ ++ L+ +H +P WMRV+ + + ++ L + Sbjct: 74 IPFEELFFFVIQTYITALVYILFNKPVLHALHLNNQQNPPAWMRVVKVTGQVVLVALSV 132
>SECY_HELPY (O25879) Preprotein translocase secY subunit| Length = 420 Score = 32.0 bits (71), Expect = 0.87 Identities = 20/74 (27%), Positives = 40/74 (54%), Gaps = 10/74 (13%) Frame = +3 Query: 204 KVIYTVISLFIFLVCSQLPLYGIH----------STTGADPFYWMRVILASNRGTVMELG 353 K++ T+ LF++ V + +P+ G+ ++ A + M A +R +++ LG Sbjct: 8 KILITLGFLFLYRVLAYIPIPGVDLAAIKAFFDSNSNNALGLFNMFSGNAVSRLSIISLG 67 Query: 354 ITPIVTSGMVMQLL 395 I P +TS ++M+LL Sbjct: 68 IMPYITSSIIMELL 81
>SECY_HELPJ (Q9ZJS9) Preprotein translocase secY subunit| Length = 420 Score = 32.0 bits (71), Expect = 0.87 Identities = 20/74 (27%), Positives = 40/74 (54%), Gaps = 10/74 (13%) Frame = +3 Query: 204 KVIYTVISLFIFLVCSQLPLYGIH----------STTGADPFYWMRVILASNRGTVMELG 353 K++ T+ LF++ V + +P+ G+ ++ A + M A +R +++ LG Sbjct: 8 KILITLGFLFLYRVLAYIPIPGVDLAAIKAFFDSNSNNALGLFNMFSGNAVSRLSIISLG 67 Query: 354 ITPIVTSGMVMQLL 395 I P +TS ++M+LL Sbjct: 68 IMPYITSSIIMELL 81
>SECY_BORBU (O51451) Preprotein translocase secY subunit| Length = 434 Score = 32.0 bits (71), Expect = 0.87 Identities = 23/80 (28%), Positives = 37/80 (46%), Gaps = 11/80 (13%) Frame = +3 Query: 198 REKVIYTVISLFIFLVCSQLPLYGIHSTTGADPFYWMRVILASN-----------RGTVM 344 R K ++T+ LF+F V S LP+ GI S F +N ++ Sbjct: 15 RNKFLFTLFVLFLFRVGSYLPIPGIDSVALKSYFKSQSDFSIANYFDFFSGGAFSNFSIF 74 Query: 345 ELGITPIVTSGMVMQLLVGS 404 L I P +++ +++QLLV S Sbjct: 75 MLSIGPYISASIIVQLLVYS 94
>SECY_MYCGE (P47416) Preprotein translocase secY subunit| Length = 475 Score = 31.6 bits (70), Expect = 1.1 Identities = 20/75 (26%), Positives = 41/75 (54%), Gaps = 8/75 (10%) Frame = +3 Query: 195 FREKVIYTVISLFIFLVCSQLPLYGIHSTTG-----ADPFYWMRVILAS---NRGTVMEL 350 F ++ TV+ L +F V + +PL GI ++ F+ + +L N+ ++ + Sbjct: 26 FMVSLVLTVVLLILFRVLAIIPLPGIRINESVLDRNSNDFFSLFNLLGGGGLNQLSLFAV 85 Query: 351 GITPIVTSGMVMQLL 395 GI+P +++ ++MQLL Sbjct: 86 GISPYISAQIIMQLL 100
>SECY_VIBCH (P78283) Preprotein translocase secY subunit| Length = 444 Score = 31.2 bits (69), Expect = 1.5 Identities = 18/76 (23%), Positives = 39/76 (51%), Gaps = 10/76 (13%) Frame = +3 Query: 198 REKVIYTVISLFIFLVCSQLPLYGIHSTTGADPFYWMRVIL----------ASNRGTVME 347 + ++ + + +L +F S +P+ GI + A+ F + + A R +++ Sbjct: 20 KSRLFFVIGALLVFRAGSFVPIPGIDAAVLAELFEQQKGTIVEMFNMFSGGALERASILA 79 Query: 348 LGITPIVTSGMVMQLL 395 LGI P +++ +V+QLL Sbjct: 80 LGIMPYISASIVVQLL 95
>SECY_BACSU (P16336) Preprotein translocase secY subunit| Length = 431 Score = 30.8 bits (68), Expect = 1.9 Identities = 19/82 (23%), Positives = 38/82 (46%), Gaps = 16/82 (19%) Frame = +3 Query: 198 REKVIYTVISLFIFLVC----------------SQLPLYGIHSTTGADPFYWMRVILASN 329 R K+I+T++ L +F + SQ+ ++ + +T G Y Sbjct: 15 RNKIIFTLLMLIVFRIGAFIPVPYVNAEALQAQSQMGVFDLLNTFGGGALYQF------- 67 Query: 330 RGTVMELGITPIVTSGMVMQLL 395 ++ +GITP +T+ +++QLL Sbjct: 68 --SIFAMGITPYITASIIIQLL 87
>MLO_HORVU (P93766) Protein MLO| Length = 533 Score = 30.4 bits (67), Expect = 2.5 Identities = 13/27 (48%), Positives = 17/27 (62%) Frame = +2 Query: 29 PS*GSTPSPARGEAPAHLAGGVRGQED 109 PS GS+P P+RG +P HL G+ D Sbjct: 449 PSRGSSPMPSRGSSPVHLLHKGMGRSD 475
>SECY_BACLD (Q05207) Preprotein translocase secY subunit| Length = 431 Score = 30.4 bits (67), Expect = 2.5 Identities = 17/73 (23%), Positives = 39/73 (53%), Gaps = 7/73 (9%) Frame = +3 Query: 198 REKVIYTVISLFIFLVCSQLPLYGIHSTT--GADPFYWMRVILASNRG-----TVMELGI 356 R K+I+T++ L +F + S +P+ +++ D ++ G +++ +GI Sbjct: 15 RNKIIFTLLMLIVFRLGSFIPVPHVNTEVLKAQDQMSVFGILNTFGGGALFNFSILAMGI 74 Query: 357 TPIVTSGMVMQLL 395 P +T+ +++QLL Sbjct: 75 MPYITASIIIQLL 87
>LEU2_ZYMMO (Q5NRC5) 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33)| (Isopropylmalate isomerase) (Alpha-IPM isomerase) (IPMI) Length = 484 Score = 30.4 bits (67), Expect = 2.5 Identities = 20/59 (33%), Positives = 25/59 (42%), Gaps = 5/59 (8%) Frame = +2 Query: 8 SSPRSVLPS*GSTPSPARGEAPAHLAGGVR-----GQEDGWRLSGAASGQAFLGFLAGS 169 +SP V+P G P PA PA A R G E G ++ G A F+G S Sbjct: 301 TSPEDVVPITGVVPDPASFADPAKQAAARRSLEYMGLEPGQKMEGLAVENVFIGSCTNS 359
>SECY_SHIFL (P0AGA5) Preprotein translocase secY subunit| Length = 443 Score = 30.4 bits (67), Expect = 2.5 Identities = 17/76 (22%), Positives = 39/76 (51%), Gaps = 10/76 (13%) Frame = +3 Query: 198 REKVIYTVISLFIFLVCSQLPLYGIHSTTGADPFYWMRVIL----------ASNRGTVME 347 + ++++ + +L +F + S +P+ GI + A R + A +R ++ Sbjct: 20 KRRLLFVIGALIVFRIGSFIPIPGIDAAVLAKLLEQQRGTIIEMFNMFSGGALSRASIFA 79 Query: 348 LGITPIVTSGMVMQLL 395 LGI P +++ +++QLL Sbjct: 80 LGIMPYISASIIIQLL 95
>SECY_ECOLI (P0AGA2) Preprotein translocase secY subunit| Length = 443 Score = 30.4 bits (67), Expect = 2.5 Identities = 17/76 (22%), Positives = 39/76 (51%), Gaps = 10/76 (13%) Frame = +3 Query: 198 REKVIYTVISLFIFLVCSQLPLYGIHSTTGADPFYWMRVIL----------ASNRGTVME 347 + ++++ + +L +F + S +P+ GI + A R + A +R ++ Sbjct: 20 KRRLLFVIGALIVFRIGSFIPIPGIDAAVLAKLLEQQRGTIIEMFNMFSGGALSRASIFA 79 Query: 348 LGITPIVTSGMVMQLL 395 LGI P +++ +++QLL Sbjct: 80 LGIMPYISASIIIQLL 95
>SECY_ECOL6 (P0AGA3) Preprotein translocase secY subunit| Length = 443 Score = 30.4 bits (67), Expect = 2.5 Identities = 17/76 (22%), Positives = 39/76 (51%), Gaps = 10/76 (13%) Frame = +3 Query: 198 REKVIYTVISLFIFLVCSQLPLYGIHSTTGADPFYWMRVIL----------ASNRGTVME 347 + ++++ + +L +F + S +P+ GI + A R + A +R ++ Sbjct: 20 KRRLLFVIGALIVFRIGSFIPIPGIDAAVLAKLLEQQRGTIIEMFNMFSGGALSRASIFA 79 Query: 348 LGITPIVTSGMVMQLL 395 LGI P +++ +++QLL Sbjct: 80 LGIMPYISASIIIQLL 95
>SECY_ECO57 (P0AGA4) Preprotein translocase secY subunit| Length = 443 Score = 30.4 bits (67), Expect = 2.5 Identities = 17/76 (22%), Positives = 39/76 (51%), Gaps = 10/76 (13%) Frame = +3 Query: 198 REKVIYTVISLFIFLVCSQLPLYGIHSTTGADPFYWMRVIL----------ASNRGTVME 347 + ++++ + +L +F + S +P+ GI + A R + A +R ++ Sbjct: 20 KRRLLFVIGALIVFRIGSFIPIPGIDAAVLAKLLEQQRGTIIEMFNMFSGGALSRASIFA 79 Query: 348 LGITPIVTSGMVMQLL 395 LGI P +++ +++QLL Sbjct: 80 LGIMPYISASIIIQLL 95
>CSPG5_CHICK (Q9DF69) Chondroitin sulfate proteoglycan 5 precursor (Acidic| leucine-rich EGF-like domain-containing brain protein) [Contains: Chondroitin sulfate proteoglycan 5, 38 kDa form; Chondroitin sulfate proteoglycan 5, 80 kDa form] Length = 594 Score = 30.0 bits (66), Expect = 3.3 Identities = 18/49 (36%), Positives = 24/49 (48%) Frame = -1 Query: 362 WGNTQLHDSTTV*CKNNTHPVERISSSGRMDAIERELTAHEENEERNDG 216 WG +L+D T + + +P + G DA E EL EE EE DG Sbjct: 323 WGLHELYDDFTPFDEADFYPTTSFYAEGDDDA-EEELEEDEEEEEEEDG 370
>SYV_TREPA (O83998) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 956 Score = 29.3 bits (64), Expect = 5.6 Identities = 12/25 (48%), Positives = 18/25 (72%) Frame = -1 Query: 221 DGVDHFFSKWYFPISTLHFRQESQE 147 D +D +FS W +P STL + QE+Q+ Sbjct: 489 DVLDTWFSSWLWPFSTLGWPQETQK 513
>ARI1_HUMAN (Q9Y4X5) Protein ariadne-1 homolog (ARI-1) (Ubiquitin-conjugating| enzyme E2-binding protein 1) (UbcH7-binding protein) (UbcM4-interacting protein) (HHARI) (H7-AP2) (MOP-6) Length = 557 Score = 29.3 bits (64), Expect = 5.6 Identities = 10/23 (43%), Positives = 16/23 (69%) Frame = +2 Query: 311 CYSCIKPWYCHGAGYYPNCDIWN 379 C+ C+ PW HG+ +Y NC+ +N Sbjct: 372 CWVCLGPWEPHGSAWY-NCNRYN 393
>SECY_STRGB (Q59912) Preprotein translocase secY subunit| Length = 437 Score = 29.3 bits (64), Expect = 5.6 Identities = 18/85 (21%), Positives = 42/85 (49%), Gaps = 12/85 (14%) Frame = +3 Query: 177 ADRKIPFREKVIYTVISLFIFLVCSQLPLYGI---------HSTTGADPFYWMRVILASN 329 A R R+K+++T+ + ++ V + +P+ G+ +G + + + + Sbjct: 8 AFRTPDLRKKLLFTLAIIVVYRVGTHIPIPGVDYKNVQQCVREASGNQGLFGLVNMFSGG 67 Query: 330 ---RGTVMELGITPIVTSGMVMQLL 395 + T+ LGI P +T+ +++QLL Sbjct: 68 ALLQITIFALGIMPYITASIILQLL 92
>YCIQ_ECOLI (P45848) Hypothetical protein yciQ| Length = 631 Score = 29.3 bits (64), Expect = 5.6 Identities = 11/29 (37%), Positives = 18/29 (62%) Frame = +3 Query: 219 VISLFIFLVCSQLPLYGIHSTTGADPFYW 305 +I+LF+ L+CS + Y ++ G FYW Sbjct: 461 IITLFLPLICSGVAFYSLYINVGDVFFYW 489
>ARI1_MOUSE (Q9Z1K5) Protein ariadne-1 homolog (ARI-1) (Ubiquitin-conjugating| enzyme E2-binding protein 1) (UbcH7-binding protein) (UbcM4-interacting protein 77) Length = 555 Score = 29.3 bits (64), Expect = 5.6 Identities = 10/23 (43%), Positives = 16/23 (69%) Frame = +2 Query: 311 CYSCIKPWYCHGAGYYPNCDIWN 379 C+ C+ PW HG+ +Y NC+ +N Sbjct: 370 CWVCLGPWEPHGSAWY-NCNRYN 391
>RLF_HUMAN (Q13129) Zinc finger protein Rlf (Rearranged L-myc fusion gene| protein) (Zn-15-related protein) Length = 1914 Score = 28.9 bits (63), Expect = 7.3 Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 4/68 (5%) Frame = -1 Query: 296 RISSSGRMDAIERELTAHEENEERNDGVDHFFSKWYFPI----STLHFRQESQERPDQMQ 129 R SSG+ + ++ +EN ++ F K Y P+ S L F QES+E+ D Sbjct: 1729 RQHSSGQENTVKNPTHVPKENFRKHSQPRSFDLKTYKPMGFESSFLKFIQESEEKEDDFD 1788 Query: 128 HPKAASHL 105 + + HL Sbjct: 1789 DWEPSEHL 1796
>SECY_STRLI (P49977) Preprotein translocase secY subunit| Length = 437 Score = 28.9 bits (63), Expect = 7.3 Identities = 20/93 (21%), Positives = 46/93 (49%), Gaps = 12/93 (12%) Frame = +3 Query: 153 AFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIH---------STTGADPFYW 305 AF P ++ D R+K+++T+ + ++ + + +P+ G+ +G + Sbjct: 4 AFAPAFKTPD----LRKKLLFTLGIIVVYRLGTHIPIPGVDYKNVQECVDQASGNQGLFG 59 Query: 306 MRVILASN---RGTVMELGITPIVTSGMVMQLL 395 + + + + TV LGI P +T+ +++QLL Sbjct: 60 LVNMFSGGALLQITVFALGIMPYITASIILQLL 92
>FCG3B_HUMAN (O75015) Low affinity immunoglobulin gamma Fc region receptor III-B| precursor (IgG Fc receptor III-1) (Fc-gamma RIII-beta) (Fc-gamma RIIIb) (FcRIIIb) (Fc-gamma RIII) (FcRIII) (FcR-10) (CD16b antigen) Length = 233 Score = 28.5 bits (62), Expect = 9.6 Identities = 10/16 (62%), Positives = 11/16 (68%) Frame = -1 Query: 380 HSRCHNWGNTQLHDST 333 H RCH+W NT LH T Sbjct: 125 HLRCHSWKNTALHKVT 140
>SECY_STACA (Q05217) Preprotein translocase secY subunit| Length = 430 Score = 28.5 bits (62), Expect = 9.6 Identities = 19/74 (25%), Positives = 34/74 (45%), Gaps = 8/74 (10%) Frame = +3 Query: 198 REKVIYTVISLFIFLVCSQLPLYGIH--------STTGADPFYWMRVILASNRGTVMELG 353 R K+ +T+ L IF + + +P G++ + G A ++ +G Sbjct: 15 RNKIFFTLAMLVIFKIGTYIPAPGVNPAAFDNNQGSQGVTDLLNTFGGGALKNFSIFAMG 74 Query: 354 ITPIVTSGMVMQLL 395 I P +T+ +VMQLL Sbjct: 75 IMPYITASIVMQLL 88
>FCG3A_HUMAN (P08637) Low affinity immunoglobulin gamma Fc region receptor III-A| precursor (IgG Fc receptor III-2) (Fc-gamma RIII-alpha) (Fc-gamma RIIIa) (FcRIIIa) (Fc-gamma RIII) (FcRIII) (FcR-10) (CD16a antigen) Length = 254 Score = 28.5 bits (62), Expect = 9.6 Identities = 10/16 (62%), Positives = 11/16 (68%) Frame = -1 Query: 380 HSRCHNWGNTQLHDST 333 H RCH+W NT LH T Sbjct: 125 HLRCHSWKNTALHKVT 140
>PEP_DROME (P41073) Zinc finger protein on ecdysone puffs| Length = 716 Score = 28.5 bits (62), Expect = 9.6 Identities = 14/42 (33%), Positives = 21/42 (50%) Frame = +2 Query: 2 ALSSPRSVLPS*GSTPSPARGEAPAHLAGGVRGQEDGWRLSG 127 A++SP + S ++PSPA+ PA A G + R G Sbjct: 670 AVASPAAAATSADASPSPAKKATPARAAAGAKATPQRQRARG 711
>HCYA_EURCA (P14750) Hemocyanin A chain (HcA)| Length = 630 Score = 28.5 bits (62), Expect = 9.6 Identities = 14/41 (34%), Positives = 22/41 (53%) Frame = +2 Query: 188 NTI*RKSDLHRHFSLHFPRVQSAPALWHPFDHWS*SFLLDA 310 +T R+ +L LHF + S A +H DH S S+++ A Sbjct: 408 HTFIREDELELSHCLHFAKPGSVRARYHHLDHESFSYIISA 448
>SECY_MYCGA (O52351) Preprotein translocase secY subunit| Length = 498 Score = 28.5 bits (62), Expect = 9.6 Identities = 21/81 (25%), Positives = 40/81 (49%), Gaps = 10/81 (12%) Frame = +3 Query: 183 RKIPFREKVIYTVISLFIFLVCSQLPLYGI-------HSTTGADPFYWMRVILAS---NR 332 R F V T+ + +F V S +PL GI + G F+ + +L ++ Sbjct: 19 RNRDFVISVFVTLFLILLFRVISVIPLPGITISQNKNNLNNGVSDFFDLFNLLGGGGLSQ 78 Query: 333 GTVMELGITPIVTSGMVMQLL 395 ++ +GI+P +++ ++MQLL Sbjct: 79 LSLFAVGISPYISAQIIMQLL 99 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 67,071,409 Number of Sequences: 219361 Number of extensions: 1332377 Number of successful extensions: 3873 Number of sequences better than 10.0: 91 Number of HSP's better than 10.0 without gapping: 3724 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3840 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3246866728 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
