ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast79b03 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_479571.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1511 Score = 472 bits (238), Expect = e-130 Identities = 363/402 (90%), Gaps = 7/402 (1%) Strand = Plus / Plus Query: 59 aagatgttcgggttcgggcaccaccacaaggaccaggcgccggcggcg---tccggcccc 115 |||||||| |||||||||||||||||||| |||||| ||||||||| || | ||| Sbjct: 78 aagatgtttgggttcgggcaccaccacaa---ccaggcaccggcggcgccgtcggacccg 134 Query: 116 aaccagatcttcaagatctactgccgggcctccgaggactactgcctcgccgtccgcgac 175 ||||||||||||||||||| |||||| ||| |||| ||||||||||| ||||||||||| Sbjct: 135 aaccagatcttcaagatcttctgccgcgccaacgagaactactgcctcaccgtccgcgac 194 Query: 176 ggcgaggtcgtgctcgcccccgtcaaccccaaggacgagacccagcactggctcaaggac 235 ||| ||||| ||||||||||||||||||||||||||| |||||||||| |||||||| Sbjct: 195 agcgccgtcgtcctcgcccccgtcaaccccaaggacgagcaccagcactggttcaaggac 254 Query: 236 atgcgcttcagcaccaccgtcaaggacgaagagggcatgccggccttcgcgctcgtcaac 295 ||| | |||||||||| || ||||||| |||||||||||||| ||||| ||||||||| Sbjct: 255 atgaggttcagcaccaaggtgaaggacggggagggcatgccggcgttcgccctcgtcaac 314 Query: 296 aaggccaccggcctcgccgtcaagcactccatcggccagtcccaccccgtgaagctggtg 355 ||||||||||| |||||||||||||||||| ||||||||||||||||||||||||| ||| Sbjct: 315 aaggccaccggactcgccgtcaagcactccctcggccagtcccaccccgtgaagcttgtg 374 Query: 356 ccgttcaacccggcgtacgaggacgcgtcggtgctgtggacggagagcaaggacgtgggc 415 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 375 ccgttcaacccggagtacgaggacgcgtcggtgctgtggacggagagcaaggacgtcggc 434 Query: 416 aagggcttccgctgcatccgcatggtcaac-acacccgcctc 456 |||||||||||||||||||||||||||||| ||||||||||| Sbjct: 435 aagggcttccgctgcatccgcatggtcaacaacacccgcctc 476 Score = 172 bits (87), Expect = 7e-40 Identities = 246/299 (82%) Strand = Plus / Plus Query: 148 cgaggactactgcctcgccgtccgcgacggcgaggtcgtgctcgcccccgtcaaccccaa 207 |||||||||||||||| |||||||| ||||| | | ||||||||| ||||||| Sbjct: 686 cgaggactactgcctcaccgtccgcaacggcaccgcctgcctcgcccccaagaaccccag 745 Query: 208 ggacgagacccagcactggctcaaggacatgcgcttcagcaccaccgtcaaggacgaaga 267 |||||| |||||||||| ||||||||||| | ||||| || ||| |||||| || Sbjct: 746 ggacgactaccagcactggatcaaggacatgaggcacagcaacaagatcagggacgagga 805 Query: 268 gggcatgccggccttcgcgctcgtcaacaaggccaccggcctcgccgtcaagcactccat 327 ||| ||||| |||||||| |||||||||| ||||||| ||| |||||||||||| Sbjct: 806 aggctacccggcgttcgcgctggtcaacaaggtcaccggcgaagccatcaagcactccac 865 Query: 328 cggccagtcccaccccgtgaagctggtgccgttcaacccggcgtacgaggacgcgtcggt 387 ||| ||| |||||| ||||||||||| || | |||||| | |||| |||||| ||| || Sbjct: 866 cggacagggccacccggtgaagctggttccctacaacccagagtaccaggacgagtctgt 925 Query: 388 gctgtggacggagagcaaggacgtgggcaagggcttccgctgcatccgcatggtcaaca 446 ||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||| Sbjct: 926 gctgtggacggagagcaaggatgtgggcaagggcttccgctgcatccgcatggtgaaca 984
>dbj|AK103324.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033125K07, full insert sequence Length = 1512 Score = 472 bits (238), Expect = e-130 Identities = 363/402 (90%), Gaps = 7/402 (1%) Strand = Plus / Plus Query: 59 aagatgttcgggttcgggcaccaccacaaggaccaggcgccggcggcg---tccggcccc 115 |||||||| |||||||||||||||||||| |||||| ||||||||| || | ||| Sbjct: 78 aagatgtttgggttcgggcaccaccacaa---ccaggcaccggcggcgccgtcggacccg 134 Query: 116 aaccagatcttcaagatctactgccgggcctccgaggactactgcctcgccgtccgcgac 175 ||||||||||||||||||| |||||| ||| |||| ||||||||||| ||||||||||| Sbjct: 135 aaccagatcttcaagatcttctgccgcgccaacgagaactactgcctcaccgtccgcgac 194 Query: 176 ggcgaggtcgtgctcgcccccgtcaaccccaaggacgagacccagcactggctcaaggac 235 ||| ||||| ||||||||||||||||||||||||||| |||||||||| |||||||| Sbjct: 195 agcgccgtcgtcctcgcccccgtcaaccccaaggacgagcaccagcactggttcaaggac 254 Query: 236 atgcgcttcagcaccaccgtcaaggacgaagagggcatgccggccttcgcgctcgtcaac 295 ||| | |||||||||| || ||||||| |||||||||||||| ||||| ||||||||| Sbjct: 255 atgaggttcagcaccaaggtgaaggacggggagggcatgccggcgttcgccctcgtcaac 314 Query: 296 aaggccaccggcctcgccgtcaagcactccatcggccagtcccaccccgtgaagctggtg 355 ||||||||||| |||||||||||||||||| ||||||||||||||||||||||||| ||| Sbjct: 315 aaggccaccggactcgccgtcaagcactccctcggccagtcccaccccgtgaagcttgtg 374 Query: 356 ccgttcaacccggcgtacgaggacgcgtcggtgctgtggacggagagcaaggacgtgggc 415 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 375 ccgttcaacccggagtacgaggacgcgtcggtgctgtggacggagagcaaggacgtcggc 434 Query: 416 aagggcttccgctgcatccgcatggtcaac-acacccgcctc 456 |||||||||||||||||||||||||||||| ||||||||||| Sbjct: 435 aagggcttccgctgcatccgcatggtcaacaacacccgcctc 476 Score = 172 bits (87), Expect = 7e-40 Identities = 246/299 (82%) Strand = Plus / Plus Query: 148 cgaggactactgcctcgccgtccgcgacggcgaggtcgtgctcgcccccgtcaaccccaa 207 |||||||||||||||| |||||||| ||||| | | ||||||||| ||||||| Sbjct: 686 cgaggactactgcctcaccgtccgcaacggcaccgcctgcctcgcccccaagaaccccag 745 Query: 208 ggacgagacccagcactggctcaaggacatgcgcttcagcaccaccgtcaaggacgaaga 267 |||||| |||||||||| ||||||||||| | ||||| || ||| |||||| || Sbjct: 746 ggacgactaccagcactggatcaaggacatgaggcacagcaacaagatcagggacgagga 805 Query: 268 gggcatgccggccttcgcgctcgtcaacaaggccaccggcctcgccgtcaagcactccat 327 ||| ||||| |||||||| |||||||||| ||||||| ||| |||||||||||| Sbjct: 806 aggctacccggcgttcgcgctggtcaacaaggtcaccggcgaagccatcaagcactccac 865 Query: 328 cggccagtcccaccccgtgaagctggtgccgttcaacccggcgtacgaggacgcgtcggt 387 ||| ||| |||||| ||||||||||| || | |||||| | |||| |||||| ||| || Sbjct: 866 cggacagggccacccggtgaagctggttccctacaacccagagtaccaggacgagtctgt 925 Query: 388 gctgtggacggagagcaaggacgtgggcaagggcttccgctgcatccgcatggtcaaca 446 ||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||| Sbjct: 926 gctgtggacggagagcaaggatgtgggcaagggcttccgctgcatccgcatggtgaaca 984
>gb|BT016442.1| Zea mays clone Contig275 mRNA sequence Length = 1443 Score = 389 bits (196), Expect = e-105 Identities = 317/356 (89%), Gaps = 1/356 (0%) Strand = Plus / Plus Query: 102 cggcgtccggccccaaccagatcttcaagatctactgccgggcctccgaggactactgcc 161 ||||||| |||||||||||| | |||||||||| |||||| ||| |||| ||||||||| Sbjct: 99 cggcgtcgggccccaaccaggtgttcaagatcttctgccgcgccaacgagaactactgcc 158 Query: 162 tcgccgtccgcgacggcgaggtcgtgctcgcccccgtcaaccccaaggacgagacccagc 221 | |||||||||||||||| |||||||| ||||| ||||||||||||||||| ||||| Sbjct: 159 tggccgtccgcgacggcgccgtcgtgctggccccggtcaaccccaaggacgaccaccagc 218 Query: 222 actggctcaaggacatgcgcttcagcaccaccgtcaaggacgaagagggcatgccggcct 281 ||||| |||||||||||||||||||||| ||||||||||| || ||||||||||| | Sbjct: 219 actggtacaaggacatgcgcttcagcacccgggtcaaggacgaggaaggcatgccggcgt 278 Query: 282 tcgcgctcgtcaacaaggccaccggcctcgccgtcaagcactccatcggccagtcccacc 341 |||||||||||||||||||||| || |||||| ||||||||||| ||||||||||||||| Sbjct: 279 tcgcgctcgtcaacaaggccacggggctcgccatcaagcactccctcggccagtcccacc 338 Query: 342 ccgtgaagctggtgccgttcaacccggcgtacgaggacgcgtcggtgctgtggacggaga 401 | || ||||| | ||| |||| ||||| | |||||||||||||||||||||||||||| Sbjct: 339 cggtcaagctcgcgcctttcagcccggaccaggaggacgcgtcggtgctgtggacggaga 398 Query: 402 gcaaggacgtgggcaagggcttccgctgcatccgcatggtcaac-acacccgcctc 456 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 399 gcaaggacgtgggcaagggcttccgctgcatccgcatggtcaacaacacccgcctc 454 Score = 133 bits (67), Expect = 6e-28 Identities = 196/239 (82%) Strand = Plus / Plus Query: 208 ggacgagacccagcactggctcaaggacatgcgcttcagcaccaccgtcaaggacgaaga 267 ||||||| |||||||||| |||||||||||||| ||||||| || |||||| || Sbjct: 703 ggacgagtaccagcactggttcaaggacatgcgccacagcacccgggtgcgggacgagga 762 Query: 268 gggcatgccggccttcgcgctcgtcaacaaggccaccggcctcgccgtcaagcactccat 327 |||| ||||||||||||||||||||||||| ||||||| || |||||||||||| Sbjct: 763 gggctacccggccttcgcgctcgtcaacaaggtcaccggcgaggcgctcaagcactccac 822 Query: 328 cggccagtcccaccccgtgaagctggtgccgttcaacccggcgtacgaggacgcgtcggt 387 || ||| ||||||||| ||||| ||||| | |||||||| ||| |||||| ||| || Sbjct: 823 ggggcagggccaccccgtcaagctcgtgccctacaacccggactaccaggacgagtccgt 882 Query: 388 gctgtggacggagagcaaggacgtgggcaagggcttccgctgcatccgcatggtcaaca 446 ||| ||||| |||||| ||||| ||||| |||||||||||| ||||||||||||||| Sbjct: 883 gctctggaccgagagccgcgacgtcggcaacggcttccgctgcgtccgcatggtcaaca 941
>ref|XM_479572.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1239 Score = 341 bits (172), Expect = 1e-90 Identities = 224/240 (93%), Gaps = 1/240 (0%) Strand = Plus / Plus Query: 218 cagcactggctcaaggacatgcgcttcagcaccaccgtcaaggacgaagagggcatgccg 277 ||||||||| ||||||||||| | |||||||||| || ||||||| |||||||||||| Sbjct: 22 cagcactggttcaaggacatgaggttcagcaccaaggtgaaggacggggagggcatgccg 81 Query: 278 gccttcgcgctcgtcaacaaggccaccggcctcgccgtcaagcactccatcggccagtcc 337 || ||||| |||||||||||||||||||| |||||||||||||||||| ||||||||||| Sbjct: 82 gcgttcgccctcgtcaacaaggccaccggactcgccgtcaagcactccctcggccagtcc 141 Query: 338 caccccgtgaagctggtgccgttcaacccggcgtacgaggacgcgtcggtgctgtggacg 397 |||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 142 caccccgtgaagcttgtgccgttcaacccggagtacgaggacgcgtcggtgctgtggacg 201 Query: 398 gagagcaaggacgtgggcaagggcttccgctgcatccgcatggtcaac-acacccgcctc 456 |||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 202 gagagcaaggacgtcggcaagggcttccgctgcatccgcatggtcaacaacacccgcctc 261 Score = 172 bits (87), Expect = 7e-40 Identities = 246/299 (82%) Strand = Plus / Plus Query: 148 cgaggactactgcctcgccgtccgcgacggcgaggtcgtgctcgcccccgtcaaccccaa 207 |||||||||||||||| |||||||| ||||| | | ||||||||| ||||||| Sbjct: 471 cgaggactactgcctcaccgtccgcaacggcaccgcctgcctcgcccccaagaaccccag 530 Query: 208 ggacgagacccagcactggctcaaggacatgcgcttcagcaccaccgtcaaggacgaaga 267 |||||| |||||||||| ||||||||||| | ||||| || ||| |||||| || Sbjct: 531 ggacgactaccagcactggatcaaggacatgaggcacagcaacaagatcagggacgagga 590 Query: 268 gggcatgccggccttcgcgctcgtcaacaaggccaccggcctcgccgtcaagcactccat 327 ||| ||||| |||||||| |||||||||| ||||||| ||| |||||||||||| Sbjct: 591 aggctacccggcgttcgcgctggtcaacaaggtcaccggcgaagccatcaagcactccac 650 Query: 328 cggccagtcccaccccgtgaagctggtgccgttcaacccggcgtacgaggacgcgtcggt 387 ||| ||| |||||| ||||||||||| || | |||||| | |||| |||||| ||| || Sbjct: 651 cggacagggccacccggtgaagctggttccctacaacccagagtaccaggacgagtctgt 710 Query: 388 gctgtggacggagagcaaggacgtgggcaagggcttccgctgcatccgcatggtcaaca 446 ||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||| Sbjct: 711 gctgtggacggagagcaaggatgtgggcaagggcttccgctgcatccgcatggtgaaca 769
>dbj|AK060899.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-D04, full insert sequence Length = 1239 Score = 341 bits (172), Expect = 1e-90 Identities = 224/240 (93%), Gaps = 1/240 (0%) Strand = Plus / Plus Query: 218 cagcactggctcaaggacatgcgcttcagcaccaccgtcaaggacgaagagggcatgccg 277 ||||||||| ||||||||||| | |||||||||| || ||||||| |||||||||||| Sbjct: 22 cagcactggttcaaggacatgaggttcagcaccaaggtgaaggacggggagggcatgccg 81 Query: 278 gccttcgcgctcgtcaacaaggccaccggcctcgccgtcaagcactccatcggccagtcc 337 || ||||| |||||||||||||||||||| |||||||||||||||||| ||||||||||| Sbjct: 82 gcgttcgccctcgtcaacaaggccaccggactcgccgtcaagcactccctcggccagtcc 141 Query: 338 caccccgtgaagctggtgccgttcaacccggcgtacgaggacgcgtcggtgctgtggacg 397 |||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 142 caccccgtgaagcttgtgccgttcaacccggagtacgaggacgcgtcggtgctgtggacg 201 Query: 398 gagagcaaggacgtgggcaagggcttccgctgcatccgcatggtcaac-acacccgcctc 456 |||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 202 gagagcaaggacgtcggcaagggcttccgctgcatccgcatggtcaacaacacccgcctc 261 Score = 167 bits (84), Expect = 4e-38 Identities = 150/172 (87%) Strand = Plus / Plus Query: 275 ccggccttcgcgctcgtcaacaaggccaccggcctcgccgtcaagcactccatcggccag 334 ||||| |||||||| |||||||||| ||||||| ||| |||||||||||| ||| ||| Sbjct: 598 ccggcgttcgcgctggtcaacaaggtcaccggcgaagccatcaagcactccaccggacag 657 Query: 335 tcccaccccgtgaagctggtgccgttcaacccggcgtacgaggacgcgtcggtgctgtgg 394 |||||| ||||||||||| || | |||||| | |||| |||||| ||| ||||||||| Sbjct: 658 ggccacccggtgaagctggttccctacaacccagagtaccaggacgagtctgtgctgtgg 717 Query: 395 acggagagcaaggacgtgggcaagggcttccgctgcatccgcatggtcaaca 446 |||||||||||||| |||||||||||||||||||||||||||||||| |||| Sbjct: 718 acggagagcaaggatgtgggcaagggcttccgctgcatccgcatggtgaaca 769
>ref|NM_187532.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1122 Score = 262 bits (132), Expect = 9e-67 Identities = 270/316 (85%) Strand = Plus / Plus Query: 124 cttcaagatctactgccgggcctccgaggactactgcctcgccgtccgcgacggcgaggt 183 ||||||||||| |||||| ||| ||||| |||||| ||||||| ||||| || | || Sbjct: 90 cttcaagatcttctgccgcgccgacgaggggtactgcgtcgccgtgcgcgaggggaacgt 149 Query: 184 cgtgctcgcccccgtcaaccccaaggacgagacccagcactggctcaaggacatgcgctt 243 ||| |||||||| |||||| |||||| |||||||||| ||||||||||||||| Sbjct: 150 cgtcctcgccccgaccaacccgcgcgacgagcaccagcactggtacaaggacatgcgctt 209 Query: 244 cagcaccaccgtcaaggacgaagagggcatgccggccttcgcgctcgtcaacaaggccac 303 |||| ||| |||||||||| ||||||| ||||| ||||||||||||||||||||||| Sbjct: 210 cagcgccaagatcaaggacgaggagggcaacccggcgttcgcgctcgtcaacaaggccac 269 Query: 304 cggcctcgccgtcaagcactccatcggccagtcccaccccgtgaagctggtgccgttcaa 363 |||||||||| ||||||||||| |||||||| |||||| |||||||||| ||||||||| Sbjct: 270 cggcctcgccatcaagcactccctcggccagggccacccggtgaagctggcgccgttcaa 329 Query: 364 cccggcgtacgaggacgcgtcggtgctgtggacggagagcaaggacgtgggcaagggctt 423 ||||| |||| ||||| |||||||||||||||||||||| |||||||||||| |||| Sbjct: 330 cccggagtacccggacgagtcggtgctgtggacggagagcggcgacgtgggcaagagctt 389 Query: 424 ccgctgcatccgcatg 439 |||||||||||||||| Sbjct: 390 ccgctgcatccgcatg 405 Score = 115 bits (58), Expect = 1e-22 Identities = 187/230 (81%) Strand = Plus / Plus Query: 217 ccagcactggctcaaggacatgcgcttcagcaccaccgtcaaggacgaagagggcatgcc 276 |||||||||| ||||||||||| | ||||| || | |||||||||| || ||| || Sbjct: 690 ccagcactggatcaaggacatgaggcacagcaacagcatcaaggacgaggaaggctaccc 749 Query: 277 ggccttcgcgctcgtcaacaaggccaccggcctcgccgtcaagcactccatcggccagtc 336 |||||||| |||||||||| || ||||||| ||| ||||||||||| ||| | Sbjct: 750 cgccttcgccctcgtcaacagggtcaccggcgaggccatcaagcactcccaaggcgaagg 809 Query: 337 ccaccccgtgaagctggtgccgttcaacccggcgtacgaggacgcgtcggtgctgtggac 396 |||||| |||||||||||||||| |||||| | ||| |||||| ||||||||||||||| Sbjct: 810 ccaccctgtgaagctggtgccgtacaaccccggataccaggacgagtcggtgctgtggac 869 Query: 397 ggagagcaaggacgtgggcaagggcttccgctgcatccgcatggtcaaca 446 ||||||| ||||| || | ||||||||||||||||||||||| |||| Sbjct: 870 ggagagccgcgacgtcgggcacggcttccgctgcatccgcatggtgaaca 919
>dbj|AK069815.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023031K10, full insert sequence Length = 1765 Score = 262 bits (132), Expect = 9e-67 Identities = 270/316 (85%) Strand = Plus / Plus Query: 124 cttcaagatctactgccgggcctccgaggactactgcctcgccgtccgcgacggcgaggt 183 ||||||||||| |||||| ||| ||||| |||||| ||||||| ||||| || | || Sbjct: 165 cttcaagatcttctgccgcgccgacgaggggtactgcgtcgccgtgcgcgaggggaacgt 224 Query: 184 cgtgctcgcccccgtcaaccccaaggacgagacccagcactggctcaaggacatgcgctt 243 ||| |||||||| |||||| |||||| |||||||||| ||||||||||||||| Sbjct: 225 cgtcctcgccccgaccaacccgcgcgacgagcaccagcactggtacaaggacatgcgctt 284 Query: 244 cagcaccaccgtcaaggacgaagagggcatgccggccttcgcgctcgtcaacaaggccac 303 |||| ||| |||||||||| ||||||| ||||| ||||||||||||||||||||||| Sbjct: 285 cagcgccaagatcaaggacgaggagggcaacccggcgttcgcgctcgtcaacaaggccac 344 Query: 304 cggcctcgccgtcaagcactccatcggccagtcccaccccgtgaagctggtgccgttcaa 363 |||||||||| ||||||||||| |||||||| |||||| |||||||||| ||||||||| Sbjct: 345 cggcctcgccatcaagcactccctcggccagggccacccggtgaagctggcgccgttcaa 404 Query: 364 cccggcgtacgaggacgcgtcggtgctgtggacggagagcaaggacgtgggcaagggctt 423 ||||| |||| ||||| |||||||||||||||||||||| |||||||||||| |||| Sbjct: 405 cccggagtacccggacgagtcggtgctgtggacggagagcggcgacgtgggcaagagctt 464 Query: 424 ccgctgcatccgcatg 439 |||||||||||||||| Sbjct: 465 ccgctgcatccgcatg 480 Score = 115 bits (58), Expect = 1e-22 Identities = 187/230 (81%) Strand = Plus / Plus Query: 217 ccagcactggctcaaggacatgcgcttcagcaccaccgtcaaggacgaagagggcatgcc 276 |||||||||| ||||||||||| | ||||| || | |||||||||| || ||| || Sbjct: 765 ccagcactggatcaaggacatgaggcacagcaacagcatcaaggacgaggaaggctaccc 824 Query: 277 ggccttcgcgctcgtcaacaaggccaccggcctcgccgtcaagcactccatcggccagtc 336 |||||||| |||||||||| || ||||||| ||| ||||||||||| ||| | Sbjct: 825 cgccttcgccctcgtcaacagggtcaccggcgaggccatcaagcactcccaaggcgaagg 884 Query: 337 ccaccccgtgaagctggtgccgttcaacccggcgtacgaggacgcgtcggtgctgtggac 396 |||||| |||||||||||||||| |||||| | ||| |||||| ||||||||||||||| Sbjct: 885 ccaccctgtgaagctggtgccgtacaaccccggataccaggacgagtcggtgctgtggac 944 Query: 397 ggagagcaaggacgtgggcaagggcttccgctgcatccgcatggtcaaca 446 ||||||| ||||| || | ||||||||||||||||||||||| |||| Sbjct: 945 ggagagccgcgacgtcgggcacggcttccgctgcatccgcatggtgaaca 994 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 58 caagatgttcgggttcgggcaccac 82 |||||||||||| |||||||||||| Sbjct: 72 caagatgttcggcttcgggcaccac 96
>emb|X95402.1|OSOSR40C1 O.sativa mRNA for novel protein, osr40c1 Length = 1458 Score = 254 bits (128), Expect = 2e-64 Identities = 269/316 (85%) Strand = Plus / Plus Query: 124 cttcaagatctactgccgggcctccgaggactactgcctcgccgtccgcgacggcgaggt 183 ||||||||||| |||||| ||| ||||| |||||| ||||||| ||||| || | || Sbjct: 152 cttcaagatcttctgccgcgccgacgaggggtactgcgtcgccgtgcgcgaggggaacgt 211 Query: 184 cgtgctcgcccccgtcaaccccaaggacgagacccagcactggctcaaggacatgcgctt 243 ||| |||||||| |||||| |||||| |||||||||| ||||||||||||||| Sbjct: 212 cgtcctcgccccgaccaacccgcgcgacgagcaccagcactggtacaaggacatgcgctt 271 Query: 244 cagcaccaccgtcaaggacgaagagggcatgccggccttcgcgctcgtcaacaaggccac 303 |||| ||| |||||||||| ||||||| ||||| ||||||||||||||||||||||| Sbjct: 272 cagcgccaagatcaaggacgaggagggcaacccggcgttcgcgctcgtcaacaaggccac 331 Query: 304 cggcctcgccgtcaagcactccatcggccagtcccaccccgtgaagctggtgccgttcaa 363 |||||||||| ||||||||||| |||||||| |||||| |||||||||| ||||||||| Sbjct: 332 cggcctcgccatcaagcactccctcggccagggccacccggtgaagctggcgccgttcaa 391 Query: 364 cccggcgtacgaggacgcgtcggtgctgtggacggagagcaaggacgtgggcaagggctt 423 ||||| |||| ||||| |||||||||||||||||||||| |||||||||||| |||| Sbjct: 392 cccggagtacccggacgagtcggtgctgtggacggagagcggcgacgtgggcaagagctt 451 Query: 424 ccgctgcatccgcatg 439 ||||||||| |||||| Sbjct: 452 ccgctgcattcgcatg 467 Score = 107 bits (54), Expect = 3e-20 Identities = 186/230 (80%) Strand = Plus / Plus Query: 217 ccagcactggctcaaggacatgcgcttcagcaccaccgtcaaggacgaagagggcatgcc 276 |||||||||| ||||||||||| | ||||| || | |||||||||| || || || Sbjct: 752 ccagcactggatcaaggacatgaggcacagcaacagcatcaaggacgaggaagggtaccc 811 Query: 277 ggccttcgcgctcgtcaacaaggccaccggcctcgccgtcaagcactccatcggccagtc 336 |||||||| |||||||||| || ||||||| ||| ||||||||||| ||| | Sbjct: 812 cgccttcgccctcgtcaacagggtcaccggcgaggccatcaagcactcccaaggcgaagg 871 Query: 337 ccaccccgtgaagctggtgccgttcaacccggcgtacgaggacgcgtcggtgctgtggac 396 |||||| |||||||||||||||| |||||| | ||| |||||| ||||||||||||||| Sbjct: 872 ccaccctgtgaagctggtgccgtacaaccccggataccaggacgagtcggtgctgtggac 931 Query: 397 ggagagcaaggacgtgggcaagggcttccgctgcatccgcatggtcaaca 446 ||||||| ||||| || | ||||||||||||||||||||||| |||| Sbjct: 932 ggagagccgcgacgtcgggcacggcttccgctgcatccgcatggtgaaca 981 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 58 caagatgttcgggttcgggcaccac 82 |||||||||||| |||||||||||| Sbjct: 59 caagatgttcggcttcgggcaccac 83
>gb|BT018342.1| Zea mays clone EL01T0403C03.c mRNA sequence Length = 690 Score = 240 bits (121), Expect = 3e-60 Identities = 173/189 (91%), Gaps = 1/189 (0%) Strand = Plus / Plus Query: 269 ggcatgccggccttcgcgctcgtcaacaaggccaccggcctcgccgtcaagcactccatc 328 ||||||||||| ||||||||||||||||||||||| || |||||| ||||||||||| || Sbjct: 16 ggcatgccggcgttcgcgctcgtcaacaaggccacggggctcgccatcaagcactccctc 75 Query: 329 ggccagtcccaccccgtgaagctggtgccgttcaacccggcgtacgaggacgcgtcggtg 388 |||||||||||||| || ||||| | ||| |||| ||||| | ||||||||||||||| Sbjct: 76 ggccagtcccacccggtcaagctcgcgcctttcagcccggaccaggaggacgcgtcggtg 135 Query: 389 ctgtggacggagagcaaggacgtgggcaagggcttccgctgcatccgcatggtcaac-ac 447 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 136 ctgtggacggagagcaaggacgtgggcaagggcttccgctgcatccgcatggtcaacaac 195 Query: 448 acccgcctc 456 ||||||||| Sbjct: 196 acccgcctc 204
>gb|BT018000.1| Zea mays clone EL01N0526G03.c mRNA sequence Length = 842 Score = 224 bits (113), Expect = 2e-55 Identities = 287/345 (83%) Strand = Plus / Plus Query: 102 cggcgtccggccccaaccagatcttcaagatctactgccgggcctccgaggactactgcc 161 ||||||| |||||||||||| | |||||||||| |||||| ||| |||| ||||||||| Sbjct: 31 cggcgtcgggccccaaccaggtgttcaagatcttctgccgcgccaacgagaactactgcc 90 Query: 162 tcgccgtccgcgacggcgaggtcgtgctcgcccccgtcaaccccaaggacgagacccagc 221 | |||||||||||||||| |||||||| ||||| ||||||||||||||||| ||||| Sbjct: 91 tggccgtccgcgacggcgccgtcgtgctggccccggtcaaccccaaggacgaccaccagc 150 Query: 222 actggctcaaggacatgcgcttcagcaccaccgtcaaggacgaagagggcatgccggcct 281 ||||| |||||||||||||||||||||| || |||||| |||||| ||||||| Sbjct: 151 actggtacaaggacatgcgcttcagcacccgggtgcgggacgaggagggctacccggcct 210 Query: 282 tcgcgctcgtcaacaaggccaccggcctcgccgtcaagcactccatcggccagtcccacc 341 |||||||||||||||||| ||||||| || |||||||||||| || ||| ||||| Sbjct: 211 tcgcgctcgtcaacaaggtcaccggcgaggcgctcaagcactccacggggcagggccacc 270 Query: 342 ccgtgaagctggtgccgttcaacccggcgtacgaggacgcgtcggtgctgtggacggaga 401 |||| ||||| ||| | |||||||| ||| |||||| ||| ||||| ||||| |||| Sbjct: 271 ccgtcaagctcgtgttctacaacccggactaccaggacgagtccgtgctctggaccgaga 330 Query: 402 gcaaggacgtgggcaagggcttccgctgcatccgcatggtcaaca 446 || ||||| ||||| |||||||||||| ||||||||||||||| Sbjct: 331 gccgcgacgtcggcaacggcttccgctgcgtccgcatggtcaaca 375
>ref|XM_479570.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1209 Score = 200 bits (101), Expect = 3e-48 Identities = 198/229 (86%), Gaps = 1/229 (0%) Strand = Plus / Plus Query: 218 cagcactggctcaaggacatgcgcttcagcaccaccgtcaaggacgaagagggcatgccg 277 ||||||||| |||||||||||| |||||| | || |||||||| |||||| ||| Sbjct: 160 cagcactggtacaaggacatgcggcacagcacgagggtgaaggacgaggagggccacccg 219 Query: 278 gccttcgcgctcgtcaacaaggccaccggcctcgccgtcaagcactccatcggccagtcc 337 || |||||||||||||| |||||||||||||||||||||||||| ||||||| ||| Sbjct: 220 gcgttcgcgctcgtcaatcgcgccaccggcctcgccgtcaagcactcgctcggccaatcc 279 Query: 338 caccccgtgaagctggtgccgttcaacccggcgtacgaggacgcgtcggtgctgtggacg 397 |||||||| ||||||||||||| |||||| | |||| |||||| ||||||||||||||| Sbjct: 280 caccccgt-aagctggtgccgtacaacccagagtaccaggacgagtcggtgctgtggacc 338 Query: 398 gagagcaaggacgtgggcaagggcttccgctgcatccgcatggtcaaca 446 |||||||||||||| ||| | |||||||||||||||||||||||||||| Sbjct: 339 gagagcaaggacgtcggccatggcttccgctgcatccgcatggtcaaca 387 Score = 115 bits (58), Expect = 1e-22 Identities = 189/232 (81%), Gaps = 3/232 (1%) Strand = Plus / Plus Query: 218 cagcactggctcaaggacatgcgcttcagcaccaccgtcaaggacgaagagggcatgccg 277 ||||||||| | ||||||||| | |||||| | | |||||||||| || ||| ||| Sbjct: 844 cagcactgggtgaaggacatgaggcacagcacgagcatcaaggacgaggaaggctacccg 903 Query: 278 gccttcgcgctcgtcaacaaggccaccggcctcgccgtcaagcactccatcggccagtcc 337 || |||||||| || |||||||||||||| ||| ||||||||||| |||| ||| | Sbjct: 904 gcgttcgcgctggtgaacaaggccaccggggaagccatcaagcactccctcggacagagc 963 Query: 338 caccccgtg---aagctggtgccgttcaacccggcgtacgaggacgcgtcggtgctgtgg 394 ||||| || | ||||||||| | |||||||| |||| ||||| ||||||||||||| Sbjct: 964 caccctgtagttaggctggtgccatacaacccggagtacctggacgagtcggtgctgtgg 1023 Query: 395 acggagagcaaggacgtgggcaagggcttccgctgcatccgcatggtcaaca 446 ||||||||||||||||| ||| | |||||||||||| |||||||||| |||| Sbjct: 1024 acggagagcaaggacgtcggccatggcttccgctgcgtccgcatggtgaaca 1075
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 186 bits (94), Expect = 4e-44 Identities = 110/114 (96%), Gaps = 1/114 (0%) Strand = Plus / Plus Query: 344 gtgaagctggtgccgttcaacccggcgtacgaggacgcgtcggtgctgtggacggagagc 403 |||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 28951199 gtgaagcttgtgccgttcaacccggagtacgaggacgcgtcggtgctgtggacggagagc 28951258 Query: 404 aaggacgtgggcaagggcttccgctgcatccgcatggtcaac-acacccgcctc 456 |||||||| ||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 28951259 aaggacgtcggcaagggcttccgctgcatccgcatggtcaacaacacccgcctc 28951312 Score = 159 bits (80), Expect = 1e-35 Identities = 116/128 (90%) Strand = Plus / Plus Query: 218 cagcactggctcaaggacatgcgcttcagcaccaccgtcaaggacgaagagggcatgccg 277 ||||||||| ||||||||||| | |||||||||| || ||||||| |||||||||||| Sbjct: 28950966 cagcactggttcaaggacatgaggttcagcaccaaggtgaaggacggggagggcatgccg 28951025 Query: 278 gccttcgcgctcgtcaacaaggccaccggcctcgccgtcaagcactccatcggccagtcc 337 || ||||| |||||||||||||||||||| |||||||||||||||||| ||||||||||| Sbjct: 28951026 gcgttcgccctcgtcaacaaggccaccggactcgccgtcaagcactccctcggccagtcc 28951085 Query: 338 caccccgt 345 |||||||| Sbjct: 28951086 caccccgt 28951093 Score = 141 bits (71), Expect = 2e-30 Identities = 138/159 (86%), Gaps = 6/159 (3%) Strand = Plus / Plus Query: 59 aagatgttcgggttcgggcaccaccacaaggaccaggcgccggcggcg---tccggcccc 115 |||||||| |||||||||||||||||||| |||||| ||||||||| || | ||| Sbjct: 28950715 aagatgtttgggttcgggcaccaccacaa---ccaggcaccggcggcgccgtcggacccg 28950771 Query: 116 aaccagatcttcaagatctactgccgggcctccgaggactactgcctcgccgtccgcgac 175 ||||||||||||||||||| |||||| ||| |||| ||||||||||| ||||||||||| Sbjct: 28950772 aaccagatcttcaagatcttctgccgcgccaacgagaactactgcctcaccgtccgcgac 28950831 Query: 176 ggcgaggtcgtgctcgcccccgtcaaccccaaggacgag 214 ||| ||||| ||||||||||||||||||||||||||| Sbjct: 28950832 agcgccgtcgtcctcgcccccgtcaaccccaaggacgag 28950870 Score = 133 bits (67), Expect = 6e-28 Identities = 94/103 (91%) Strand = Plus / Plus Query: 344 gtgaagctggtgccgttcaacccggcgtacgaggacgcgtcggtgctgtggacggagagc 403 |||||||||||||||| |||||| | |||| |||||| ||||||||||||||| |||||| Sbjct: 28939674 gtgaagctggtgccgtacaacccagagtaccaggacgagtcggtgctgtggaccgagagc 28939733 Query: 404 aaggacgtgggcaagggcttccgctgcatccgcatggtcaaca 446 |||||||| ||| | |||||||||||||||||||||||||||| Sbjct: 28939734 aaggacgtcggccatggcttccgctgcatccgcatggtcaaca 28939776 Score = 125 bits (63), Expect = 1e-25 Identities = 93/103 (90%) Strand = Plus / Plus Query: 344 gtgaagctggtgccgttcaacccggcgtacgaggacgcgtcggtgctgtggacggagagc 403 ||||||||||| || | |||||| | |||| |||||| ||| |||||||||||||||||| Sbjct: 28951886 gtgaagctggttccctacaacccagagtaccaggacgagtctgtgctgtggacggagagc 28951945 Query: 404 aaggacgtgggcaagggcttccgctgcatccgcatggtcaaca 446 ||||| |||||||||||||||||||||||||||||||| |||| Sbjct: 28951946 aaggatgtgggcaagggcttccgctgcatccgcatggtgaaca 28951988 Score = 117 bits (59), Expect = 3e-23 Identities = 122/143 (85%) Strand = Plus / Plus Query: 200 aaccccaaggacgagacccagcactggctcaaggacatgcgcttcagcaccaccgtcaag 259 ||||||||||||||| |||||| ||| ||||||||||| | | ||||||| | ||||| Sbjct: 28955632 aaccccaaggacgagtaccagcattggatcaaggacatgaggtggagcaccagcatcaag 28955691 Query: 260 gacgaagagggcatgccggccttcgcgctcgtcaacaaggccaccggcctcgccgtcaag 319 ||||| |||||| || |||||||| |||||||||||||||||||||| ||| ||||| Sbjct: 28955692 gacgaggagggctaccctgccttcgccctcgtcaacaaggccaccggccaggccatcaag 28955751 Query: 320 cactccatcggccagtcccaccc 342 |||||| |||||||||| ||||| Sbjct: 28955752 cactccctcggccagtcacaccc 28955774 Score = 107 bits (54), Expect = 3e-20 Identities = 87/98 (88%) Strand = Plus / Plus Query: 349 gctggtgccgttcaacccggcgtacgaggacgcgtcggtgctgtggacggagagcaagga 408 ||||||||| | |||||||| |||| ||||| ||||||||||||||||||||||||||| Sbjct: 28940681 gctggtgccatacaacccggagtacctggacgagtcggtgctgtggacggagagcaagga 28940740 Query: 409 cgtgggcaagggcttccgctgcatccgcatggtcaaca 446 ||| ||| | |||||||||||| |||||||||| |||| Sbjct: 28940741 cgtcggccatggcttccgctgcgtccgcatggtgaaca 28940778 Score = 87.7 bits (44), Expect = 3e-14 Identities = 107/128 (83%) Strand = Plus / Plus Query: 218 cagcactggctcaaggacatgcgcttcagcaccaccgtcaaggacgaagagggcatgccg 277 ||||||||| |||||||||||| |||||| | || |||||||| |||||| ||| Sbjct: 28939449 cagcactggtacaaggacatgcggcacagcacgagggtgaaggacgaggagggccacccg 28939508 Query: 278 gccttcgcgctcgtcaacaaggccaccggcctcgccgtcaagcactccatcggccagtcc 337 || |||||||||||||| |||||||||||||||||||||||||| ||||||| ||| Sbjct: 28939509 gcgttcgcgctcgtcaatcgcgccaccggcctcgccgtcaagcactcgctcggccaatcc 28939568 Query: 338 caccccgt 345 |||||||| Sbjct: 28939569 caccccgt 28939576 Score = 61.9 bits (31), Expect = 2e-06 Identities = 61/71 (85%) Strand = Plus / Plus Query: 376 ggacgcgtcggtgctgtggacggagagcaaggacgtgggcaagggcttccgctgcatccg 435 ||||| |||||||||||||||||||||| |||||||| || || ||| | |||||||| Sbjct: 28955890 ggacgagtcggtgctgtggacggagagccgcgacgtggggaacgggttcaggtgcatccg 28955949 Query: 436 catggtcaaca 446 |||||| |||| Sbjct: 28955950 catggtgaaca 28955960 Score = 50.1 bits (25), Expect = 0.007 Identities = 61/73 (83%) Strand = Plus / Plus Query: 275 ccggccttcgcgctcgtcaacaaggccaccggcctcgccgtcaagcactccatcggccag 334 ||||| |||||||| |||||||||| ||||||| ||| |||||||||||| ||| ||| Sbjct: 28951727 ccggcgttcgcgctggtcaacaaggtcaccggcgaagccatcaagcactccaccggacag 28951786 Query: 335 tcccaccccgtga 347 |||||| |||| Sbjct: 28951787 ggccacccggtga 28951799 Score = 46.1 bits (23), Expect = 0.10 Identities = 29/31 (93%) Strand = Plus / Plus Query: 148 cgaggactactgcctcgccgtccgcgacggc 178 |||||||||||||||| |||||||| ||||| Sbjct: 28951522 cgaggactactgcctcaccgtccgcaacggc 28951552 Score = 42.1 bits (21), Expect = 1.6 Identities = 72/89 (80%) Strand = Plus / Plus Query: 218 cagcactggctcaaggacatgcgcttcagcaccaccgtcaaggacgaagagggcatgccg 277 ||||||||| | ||||||||| | |||||| | | |||||||||| || ||| ||| Sbjct: 28940335 cagcactgggtgaaggacatgaggcacagcacgagcatcaaggacgaggaaggctacccg 28940394 Query: 278 gccttcgcgctcgtcaacaaggccaccgg 306 || |||||||| || |||||||||||||| Sbjct: 28940395 gcgttcgcgctggtgaacaaggccaccgg 28940423
>dbj|AP005167.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0060O17 Length = 180015 Score = 186 bits (94), Expect = 4e-44 Identities = 110/114 (96%), Gaps = 1/114 (0%) Strand = Plus / Plus Query: 344 gtgaagctggtgccgttcaacccggcgtacgaggacgcgtcggtgctgtggacggagagc 403 |||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 68736 gtgaagcttgtgccgttcaacccggagtacgaggacgcgtcggtgctgtggacggagagc 68795 Query: 404 aaggacgtgggcaagggcttccgctgcatccgcatggtcaac-acacccgcctc 456 |||||||| ||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 68796 aaggacgtcggcaagggcttccgctgcatccgcatggtcaacaacacccgcctc 68849 Score = 159 bits (80), Expect = 1e-35 Identities = 116/128 (90%) Strand = Plus / Plus Query: 218 cagcactggctcaaggacatgcgcttcagcaccaccgtcaaggacgaagagggcatgccg 277 ||||||||| ||||||||||| | |||||||||| || ||||||| |||||||||||| Sbjct: 68503 cagcactggttcaaggacatgaggttcagcaccaaggtgaaggacggggagggcatgccg 68562 Query: 278 gccttcgcgctcgtcaacaaggccaccggcctcgccgtcaagcactccatcggccagtcc 337 || ||||| |||||||||||||||||||| |||||||||||||||||| ||||||||||| Sbjct: 68563 gcgttcgccctcgtcaacaaggccaccggactcgccgtcaagcactccctcggccagtcc 68622 Query: 338 caccccgt 345 |||||||| Sbjct: 68623 caccccgt 68630 Score = 141 bits (71), Expect = 2e-30 Identities = 138/159 (86%), Gaps = 6/159 (3%) Strand = Plus / Plus Query: 59 aagatgttcgggttcgggcaccaccacaaggaccaggcgccggcggcg---tccggcccc 115 |||||||| |||||||||||||||||||| |||||| ||||||||| || | ||| Sbjct: 68252 aagatgtttgggttcgggcaccaccacaa---ccaggcaccggcggcgccgtcggacccg 68308 Query: 116 aaccagatcttcaagatctactgccgggcctccgaggactactgcctcgccgtccgcgac 175 ||||||||||||||||||| |||||| ||| |||| ||||||||||| ||||||||||| Sbjct: 68309 aaccagatcttcaagatcttctgccgcgccaacgagaactactgcctcaccgtccgcgac 68368 Query: 176 ggcgaggtcgtgctcgcccccgtcaaccccaaggacgag 214 ||| ||||| ||||||||||||||||||||||||||| Sbjct: 68369 agcgccgtcgtcctcgcccccgtcaaccccaaggacgag 68407 Score = 133 bits (67), Expect = 6e-28 Identities = 94/103 (91%) Strand = Plus / Plus Query: 344 gtgaagctggtgccgttcaacccggcgtacgaggacgcgtcggtgctgtggacggagagc 403 |||||||||||||||| |||||| | |||| |||||| ||||||||||||||| |||||| Sbjct: 57211 gtgaagctggtgccgtacaacccagagtaccaggacgagtcggtgctgtggaccgagagc 57270 Query: 404 aaggacgtgggcaagggcttccgctgcatccgcatggtcaaca 446 |||||||| ||| | |||||||||||||||||||||||||||| Sbjct: 57271 aaggacgtcggccatggcttccgctgcatccgcatggtcaaca 57313 Score = 125 bits (63), Expect = 1e-25 Identities = 93/103 (90%) Strand = Plus / Plus Query: 344 gtgaagctggtgccgttcaacccggcgtacgaggacgcgtcggtgctgtggacggagagc 403 ||||||||||| || | |||||| | |||| |||||| ||| |||||||||||||||||| Sbjct: 69423 gtgaagctggttccctacaacccagagtaccaggacgagtctgtgctgtggacggagagc 69482 Query: 404 aaggacgtgggcaagggcttccgctgcatccgcatggtcaaca 446 ||||| |||||||||||||||||||||||||||||||| |||| Sbjct: 69483 aaggatgtgggcaagggcttccgctgcatccgcatggtgaaca 69525 Score = 117 bits (59), Expect = 3e-23 Identities = 122/143 (85%) Strand = Plus / Plus Query: 200 aaccccaaggacgagacccagcactggctcaaggacatgcgcttcagcaccaccgtcaag 259 ||||||||||||||| |||||| ||| ||||||||||| | | ||||||| | ||||| Sbjct: 73169 aaccccaaggacgagtaccagcattggatcaaggacatgaggtggagcaccagcatcaag 73228 Query: 260 gacgaagagggcatgccggccttcgcgctcgtcaacaaggccaccggcctcgccgtcaag 319 ||||| |||||| || |||||||| |||||||||||||||||||||| ||| ||||| Sbjct: 73229 gacgaggagggctaccctgccttcgccctcgtcaacaaggccaccggccaggccatcaag 73288 Query: 320 cactccatcggccagtcccaccc 342 |||||| |||||||||| ||||| Sbjct: 73289 cactccctcggccagtcacaccc 73311 Score = 107 bits (54), Expect = 3e-20 Identities = 87/98 (88%) Strand = Plus / Plus Query: 349 gctggtgccgttcaacccggcgtacgaggacgcgtcggtgctgtggacggagagcaagga 408 ||||||||| | |||||||| |||| ||||| ||||||||||||||||||||||||||| Sbjct: 58218 gctggtgccatacaacccggagtacctggacgagtcggtgctgtggacggagagcaagga 58277 Query: 409 cgtgggcaagggcttccgctgcatccgcatggtcaaca 446 ||| ||| | |||||||||||| |||||||||| |||| Sbjct: 58278 cgtcggccatggcttccgctgcgtccgcatggtgaaca 58315 Score = 87.7 bits (44), Expect = 3e-14 Identities = 107/128 (83%) Strand = Plus / Plus Query: 218 cagcactggctcaaggacatgcgcttcagcaccaccgtcaaggacgaagagggcatgccg 277 ||||||||| |||||||||||| |||||| | || |||||||| |||||| ||| Sbjct: 56986 cagcactggtacaaggacatgcggcacagcacgagggtgaaggacgaggagggccacccg 57045 Query: 278 gccttcgcgctcgtcaacaaggccaccggcctcgccgtcaagcactccatcggccagtcc 337 || |||||||||||||| |||||||||||||||||||||||||| ||||||| ||| Sbjct: 57046 gcgttcgcgctcgtcaatcgcgccaccggcctcgccgtcaagcactcgctcggccaatcc 57105 Query: 338 caccccgt 345 |||||||| Sbjct: 57106 caccccgt 57113 Score = 61.9 bits (31), Expect = 2e-06 Identities = 61/71 (85%) Strand = Plus / Plus Query: 376 ggacgcgtcggtgctgtggacggagagcaaggacgtgggcaagggcttccgctgcatccg 435 ||||| |||||||||||||||||||||| |||||||| || || ||| | |||||||| Sbjct: 73427 ggacgagtcggtgctgtggacggagagccgcgacgtggggaacgggttcaggtgcatccg 73486 Query: 436 catggtcaaca 446 |||||| |||| Sbjct: 73487 catggtgaaca 73497 Score = 50.1 bits (25), Expect = 0.007 Identities = 61/73 (83%) Strand = Plus / Plus Query: 275 ccggccttcgcgctcgtcaacaaggccaccggcctcgccgtcaagcactccatcggccag 334 ||||| |||||||| |||||||||| ||||||| ||| |||||||||||| ||| ||| Sbjct: 69264 ccggcgttcgcgctggtcaacaaggtcaccggcgaagccatcaagcactccaccggacag 69323 Query: 335 tcccaccccgtga 347 |||||| |||| Sbjct: 69324 ggccacccggtga 69336 Score = 46.1 bits (23), Expect = 0.10 Identities = 29/31 (93%) Strand = Plus / Plus Query: 148 cgaggactactgcctcgccgtccgcgacggc 178 |||||||||||||||| |||||||| ||||| Sbjct: 69059 cgaggactactgcctcaccgtccgcaacggc 69089 Score = 42.1 bits (21), Expect = 1.6 Identities = 72/89 (80%) Strand = Plus / Plus Query: 218 cagcactggctcaaggacatgcgcttcagcaccaccgtcaaggacgaagagggcatgccg 277 ||||||||| | ||||||||| | |||||| | | |||||||||| || ||| ||| Sbjct: 57872 cagcactgggtgaaggacatgaggcacagcacgagcatcaaggacgaggaaggctacccg 57931 Query: 278 gccttcgcgctcgtcaacaaggccaccgg 306 || |||||||| || |||||||||||||| Sbjct: 57932 gcgttcgcgctggtgaacaaggccaccgg 57960
>emb|Y08987.1|OSR40G2 O.sativa osr40g2 gene Length = 2101 Score = 186 bits (94), Expect = 4e-44 Identities = 110/114 (96%), Gaps = 1/114 (0%) Strand = Plus / Plus Query: 344 gtgaagctggtgccgttcaacccggcgtacgaggacgcgtcggtgctgtggacggagagc 403 |||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 1126 gtgaagcttgtgccgttcaacccggagtacgaggacgcgtcggtgctgtggacggagagc 1185 Query: 404 aaggacgtgggcaagggcttccgctgcatccgcatggtcaac-acacccgcctc 456 |||||||| ||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 1186 aaggacgtcggcaagggcttccgctgcatccgcatggtcaacaacacccgcctc 1239 Score = 159 bits (80), Expect = 1e-35 Identities = 116/128 (90%) Strand = Plus / Plus Query: 218 cagcactggctcaaggacatgcgcttcagcaccaccgtcaaggacgaagagggcatgccg 277 ||||||||| ||||||||||| | |||||||||| || ||||||| |||||||||||| Sbjct: 893 cagcactggttcaaggacatgaggttcagcaccaaggtgaaggacggggagggcatgccg 952 Query: 278 gccttcgcgctcgtcaacaaggccaccggcctcgccgtcaagcactccatcggccagtcc 337 || ||||| |||||||||||||||||||| |||||||||||||||||| ||||||||||| Sbjct: 953 gcgttcgccctcgtcaacaaggccaccggactcgccgtcaagcactccctcggccagtcc 1012 Query: 338 caccccgt 345 |||||||| Sbjct: 1013 caccccgt 1020 Score = 141 bits (71), Expect = 2e-30 Identities = 138/159 (86%), Gaps = 6/159 (3%) Strand = Plus / Plus Query: 59 aagatgttcgggttcgggcaccaccacaaggaccaggcgccggcggcg---tccggcccc 115 |||||||| |||||||||||||||||||| |||||| ||||||||| || | ||| Sbjct: 642 aagatgtttgggttcgggcaccaccacaa---ccaggcaccggcggcgccgtcggacccg 698 Query: 116 aaccagatcttcaagatctactgccgggcctccgaggactactgcctcgccgtccgcgac 175 ||||||||||||||||||| |||||| ||| |||| ||||||||||| ||||||||||| Sbjct: 699 aaccagatcttcaagatcttctgccgcgccaacgagaactactgcctcaccgtccgcgac 758 Query: 176 ggcgaggtcgtgctcgcccccgtcaaccccaaggacgag 214 ||| ||||| ||||||||||||||||||||||||||| Sbjct: 759 agcgccgtcgtcctcgcccccgtcaaccccaaggacgag 797 Score = 101 bits (51), Expect = 2e-18 Identities = 90/103 (87%) Strand = Plus / Plus Query: 344 gtgaagctggtgccgttcaacccggcgtacgaggacgcgtcggtgctgtggacggagagc 403 ||||||||||| || | |||||| | |||| |||||| ||| || ||||||| ||||||| Sbjct: 1813 gtgaagctggttccctacaacccagagtaccaggacgagtctgtactgtggagggagagc 1872 Query: 404 aaggacgtgggcaagggcttccgctgcatccgcatggtcaaca 446 ||| | |||||||||||||||||||||||||||||||| |||| Sbjct: 1873 aagcatgtgggcaagggcttccgctgcatccgcatggtgaaca 1915 Score = 50.1 bits (25), Expect = 0.007 Identities = 61/73 (83%) Strand = Plus / Plus Query: 275 ccggccttcgcgctcgtcaacaaggccaccggcctcgccgtcaagcactccatcggccag 334 ||||| |||||||| |||||||||| ||||||| ||| |||||||||||| ||| ||| Sbjct: 1654 ccggcgttcgcgctggtcaacaaggtcaccggcgaagccatcaagcactccaccggacag 1713 Query: 335 tcccaccccgtga 347 |||||| |||| Sbjct: 1714 ggccacccggtga 1726 Score = 46.1 bits (23), Expect = 0.10 Identities = 29/31 (93%) Strand = Plus / Plus Query: 148 cgaggactactgcctcgccgtccgcgacggc 178 |||||||||||||||| |||||||| ||||| Sbjct: 1449 cgaggactactgcctcaccgtccgcaacggc 1479
>ref|XM_479573.1| Oryza sativa (japonica cultivar-group), mRNA Length = 988 Score = 172 bits (87), Expect = 7e-40 Identities = 207/247 (83%) Strand = Plus / Plus Query: 200 aaccccaaggacgagacccagcactggctcaaggacatgcgcttcagcaccaccgtcaag 259 ||||||||||||||| |||||| ||| ||||||||||| | | ||||||| | ||||| Sbjct: 337 aaccccaaggacgagtaccagcattggatcaaggacatgaggtggagcaccagcatcaag 396 Query: 260 gacgaagagggcatgccggccttcgcgctcgtcaacaaggccaccggcctcgccgtcaag 319 ||||| |||||| || |||||||| |||||||||||||||||||||| ||| ||||| Sbjct: 397 gacgaggagggctaccctgccttcgccctcgtcaacaaggccaccggccaggccatcaag 456 Query: 320 cactccatcggccagtcccaccccgtgaagctggtgccgttcaacccggcgtacgaggac 379 |||||| |||||||||| ||||| |||| ||||||||||| |||||||| | |||| Sbjct: 457 cactccctcggccagtcacaccctgtgaggctggtgccgtacaacccggaggtgatggac 516 Query: 380 gcgtcggtgctgtggacggagagcaaggacgtgggcaagggcttccgctgcatccgcatg 439 | |||||||||||||||||||||| |||||||| || || ||| | |||||||||||| Sbjct: 517 gagtcggtgctgtggacggagagccgcgacgtggggaacgggttcaggtgcatccgcatg 576 Query: 440 gtcaaca 446 || |||| Sbjct: 577 gtgaaca 583
>dbj|AK072989.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023145K15, full insert sequence Length = 987 Score = 172 bits (87), Expect = 7e-40 Identities = 207/247 (83%) Strand = Plus / Plus Query: 200 aaccccaaggacgagacccagcactggctcaaggacatgcgcttcagcaccaccgtcaag 259 ||||||||||||||| |||||| ||| ||||||||||| | | ||||||| | ||||| Sbjct: 336 aaccccaaggacgagtaccagcattggatcaaggacatgaggtggagcaccagcatcaag 395 Query: 260 gacgaagagggcatgccggccttcgcgctcgtcaacaaggccaccggcctcgccgtcaag 319 ||||| |||||| || |||||||| |||||||||||||||||||||| ||| ||||| Sbjct: 396 gacgaggagggctaccctgccttcgccctcgtcaacaaggccaccggccaggccatcaag 455 Query: 320 cactccatcggccagtcccaccccgtgaagctggtgccgttcaacccggcgtacgaggac 379 |||||| |||||||||| ||||| |||| ||||||||||| |||||||| | |||| Sbjct: 456 cactccctcggccagtcacaccctgtgaggctggtgccgtacaacccggaggtgatggac 515 Query: 380 gcgtcggtgctgtggacggagagcaaggacgtgggcaagggcttccgctgcatccgcatg 439 | |||||||||||||||||||||| |||||||| || || ||| | |||||||||||| Sbjct: 516 gagtcggtgctgtggacggagagccgcgacgtggggaacgggttcaggtgcatccgcatg 575 Query: 440 gtcaaca 446 || |||| Sbjct: 576 gtgaaca 582
>gb|BT017376.1| Zea mays clone EL01N0325G07.c mRNA sequence Length = 778 Score = 165 bits (83), Expect = 2e-37 Identities = 185/219 (84%) Strand = Plus / Plus Query: 124 cttcaagatctactgccgggcctccgaggactactgcctcgccgtccgcgacggcgaggt 183 ||||||||||| |||| |||| ||||| ||||||||| |||||||||||||| | || Sbjct: 151 cttcaagatcttctgcaaggccgacgaggggtactgcctcaccgtccgcgacggcaacgt 210 Query: 184 cgtgctcgcccccgtcaaccccaaggacgagacccagcactggctcaaggacatgcgctt 243 ||||| ||||||| |||||| |||||| |||||||||| ||||||||||||||| Sbjct: 211 ggtgctggcccccgccaacccgcgcgacgagcaccagcactggtacaaggacatgcgctt 270 Query: 244 cagcaccaccgtcaaggacgaagagggcatgccggccttcgcgctcgtcaacaaggccac 303 ||||||| ||||||||||| ||||||| || || ||||| ||||||||||||||||| Sbjct: 271 cagcacccaggtcaaggacgaggagggcaaccctgcgttcgccctcgtcaacaaggccac 330 Query: 304 cggcctcgccgtcaagcactccatcggccagtcccaccc 342 || |||||| ||||||||||| |||||||||||||||| Sbjct: 331 tgggctcgccatcaagcactccctcggccagtcccaccc 369 Score = 149 bits (75), Expect = 1e-32 Identities = 96/103 (93%) Strand = Plus / Plus Query: 344 gtgaagctggtgccgttcaacccggcgtacgaggacgcgtcggtgctgtggacggagagc 403 ||||||||||||||||||||||||| |||| |||||| |||||||||||||||||||||| Sbjct: 464 gtgaagctggtgccgttcaacccggagtaccaggacgagtcggtgctgtggacggagagc 523 Query: 404 aaggacgtgggcaagggcttccgctgcatccgcatggtcaaca 446 ||||||||||||||||||||||||||||||||||| |||| Sbjct: 524 ggcgacgtgggcaagggcttccgctgcatccgcatggtgaaca 566 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 58 caagatgttcgggttcgggcaccac 82 |||||||||||| |||||||||||| Sbjct: 76 caagatgttcggcttcgggcaccac 100
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 149 bits (75), Expect = 1e-32 Identities = 177/211 (83%) Strand = Plus / Minus Query: 124 cttcaagatctactgccgggcctccgaggactactgcctcgccgtccgcgacggcgaggt 183 ||||||||||| |||||| ||| ||||| |||||| ||||||| ||||| || | || Sbjct: 11932527 cttcaagatcttctgccgcgccgacgaggggtactgcgtcgccgtgcgcgaggggaacgt 11932468 Query: 184 cgtgctcgcccccgtcaaccccaaggacgagacccagcactggctcaaggacatgcgctt 243 ||| |||||||| |||||| |||||| |||||||||| ||||||||||||||| Sbjct: 11932467 cgtcctcgccccgaccaacccgcgcgacgagcaccagcactggtacaaggacatgcgctt 11932408 Query: 244 cagcaccaccgtcaaggacgaagagggcatgccggccttcgcgctcgtcaacaaggccac 303 |||| ||| |||||||||| ||||||| ||||| ||||||||||||||||||||||| Sbjct: 11932407 cagcgccaagatcaaggacgaggagggcaacccggcgttcgcgctcgtcaacaaggccac 11932348 Query: 304 cggcctcgccgtcaagcactccatcggccag 334 |||||||||| ||||||||||| |||||||| Sbjct: 11932347 cggcctcgccatcaagcactccctcggccag 11932317 Score = 119 bits (60), Expect = 9e-24 Identities = 87/96 (90%) Strand = Plus / Minus Query: 344 gtgaagctggtgccgttcaacccggcgtacgaggacgcgtcggtgctgtggacggagagc 403 |||||||||| |||||||||||||| |||| ||||| |||||||||||||||||||||| Sbjct: 11932198 gtgaagctggcgccgttcaacccggagtacccggacgagtcggtgctgtggacggagagc 11932139 Query: 404 aaggacgtgggcaagggcttccgctgcatccgcatg 439 |||||||||||| |||||||||||||||||||| Sbjct: 11932138 ggcgacgtgggcaagagcttccgctgcatccgcatg 11932103 Score = 93.7 bits (47), Expect = 5e-16 Identities = 89/103 (86%) Strand = Plus / Minus Query: 344 gtgaagctggtgccgttcaacccggcgtacgaggacgcgtcggtgctgtggacggagagc 403 |||||||||||||||| |||||| | ||| |||||| |||||||||||||||||||||| Sbjct: 11931582 gtgaagctggtgccgtacaaccccggataccaggacgagtcggtgctgtggacggagagc 11931523 Query: 404 aaggacgtgggcaagggcttccgctgcatccgcatggtcaaca 446 ||||| || | ||||||||||||||||||||||| |||| Sbjct: 11931522 cgcgacgtcgggcacggcttccgctgcatccgcatggtgaaca 11931480 Score = 50.1 bits (25), Expect = 0.007 Identities = 88/109 (80%) Strand = Plus / Minus Query: 217 ccagcactggctcaaggacatgcgcttcagcaccaccgtcaaggacgaagagggcatgcc 276 |||||||||| ||||||||||| | ||||| || | |||||||||| || ||| || Sbjct: 11931818 ccagcactggatcaaggacatgaggcacagcaacagcatcaaggacgaggaaggctaccc 11931759 Query: 277 ggccttcgcgctcgtcaacaaggccaccggcctcgccgtcaagcactcc 325 |||||||| |||||||||| || ||||||| ||| ||||||||||| Sbjct: 11931758 cgccttcgccctcgtcaacagggtcaccggcgaggccatcaagcactcc 11931710 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 58 caagatgttcgggttcgggcaccac 82 |||||||||||| |||||||||||| Sbjct: 11932620 caagatgttcggcttcgggcaccac 11932596 Score = 40.1 bits (20), Expect = 6.4 Identities = 38/44 (86%) Strand = Plus / Plus Query: 281 ttcgcgctcgtcaacaaggccaccggcctcgccgtcaagcactc 324 ||||||||||| || |||||||||||| ||| |||||||||| Sbjct: 11852578 ttcgcgctcgtgaataaggccaccggcgaagccatcaagcactc 11852621
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 149 bits (75), Expect = 1e-32 Identities = 177/211 (83%) Strand = Plus / Minus Query: 124 cttcaagatctactgccgggcctccgaggactactgcctcgccgtccgcgacggcgaggt 183 ||||||||||| |||||| ||| ||||| |||||| ||||||| ||||| || | || Sbjct: 11929290 cttcaagatcttctgccgcgccgacgaggggtactgcgtcgccgtgcgcgaggggaacgt 11929231 Query: 184 cgtgctcgcccccgtcaaccccaaggacgagacccagcactggctcaaggacatgcgctt 243 ||| |||||||| |||||| |||||| |||||||||| ||||||||||||||| Sbjct: 11929230 cgtcctcgccccgaccaacccgcgcgacgagcaccagcactggtacaaggacatgcgctt 11929171 Query: 244 cagcaccaccgtcaaggacgaagagggcatgccggccttcgcgctcgtcaacaaggccac 303 |||| ||| |||||||||| ||||||| ||||| ||||||||||||||||||||||| Sbjct: 11929170 cagcgccaagatcaaggacgaggagggcaacccggcgttcgcgctcgtcaacaaggccac 11929111 Query: 304 cggcctcgccgtcaagcactccatcggccag 334 |||||||||| ||||||||||| |||||||| Sbjct: 11929110 cggcctcgccatcaagcactccctcggccag 11929080 Score = 119 bits (60), Expect = 9e-24 Identities = 87/96 (90%) Strand = Plus / Minus Query: 344 gtgaagctggtgccgttcaacccggcgtacgaggacgcgtcggtgctgtggacggagagc 403 |||||||||| |||||||||||||| |||| ||||| |||||||||||||||||||||| Sbjct: 11928961 gtgaagctggcgccgttcaacccggagtacccggacgagtcggtgctgtggacggagagc 11928902 Query: 404 aaggacgtgggcaagggcttccgctgcatccgcatg 439 |||||||||||| |||||||||||||||||||| Sbjct: 11928901 ggcgacgtgggcaagagcttccgctgcatccgcatg 11928866 Score = 93.7 bits (47), Expect = 5e-16 Identities = 89/103 (86%) Strand = Plus / Minus Query: 344 gtgaagctggtgccgttcaacccggcgtacgaggacgcgtcggtgctgtggacggagagc 403 |||||||||||||||| |||||| | ||| |||||| |||||||||||||||||||||| Sbjct: 11928345 gtgaagctggtgccgtacaaccccggataccaggacgagtcggtgctgtggacggagagc 11928286 Query: 404 aaggacgtgggcaagggcttccgctgcatccgcatggtcaaca 446 ||||| || | ||||||||||||||||||||||| |||| Sbjct: 11928285 cgcgacgtcgggcacggcttccgctgcatccgcatggtgaaca 11928243 Score = 50.1 bits (25), Expect = 0.007 Identities = 88/109 (80%) Strand = Plus / Minus Query: 217 ccagcactggctcaaggacatgcgcttcagcaccaccgtcaaggacgaagagggcatgcc 276 |||||||||| ||||||||||| | ||||| || | |||||||||| || ||| || Sbjct: 11928581 ccagcactggatcaaggacatgaggcacagcaacagcatcaaggacgaggaaggctaccc 11928522 Query: 277 ggccttcgcgctcgtcaacaaggccaccggcctcgccgtcaagcactcc 325 |||||||| |||||||||| || ||||||| ||| ||||||||||| Sbjct: 11928521 cgccttcgccctcgtcaacagggtcaccggcgaggccatcaagcactcc 11928473 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 58 caagatgttcgggttcgggcaccac 82 |||||||||||| |||||||||||| Sbjct: 11929383 caagatgttcggcttcgggcaccac 11929359 Score = 40.1 bits (20), Expect = 6.4 Identities = 38/44 (86%) Strand = Plus / Plus Query: 281 ttcgcgctcgtcaacaaggccaccggcctcgccgtcaagcactc 324 ||||||||||| || |||||||||||| ||| |||||||||| Sbjct: 11849341 ttcgcgctcgtgaataaggccaccggcgaagccatcaagcactc 11849384
>gb|AC126222.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0014I10, complete sequence Length = 113946 Score = 149 bits (75), Expect = 1e-32 Identities = 177/211 (83%) Strand = Plus / Minus Query: 124 cttcaagatctactgccgggcctccgaggactactgcctcgccgtccgcgacggcgaggt 183 ||||||||||| |||||| ||| ||||| |||||| ||||||| ||||| || | || Sbjct: 33789 cttcaagatcttctgccgcgccgacgaggggtactgcgtcgccgtgcgcgaggggaacgt 33730 Query: 184 cgtgctcgcccccgtcaaccccaaggacgagacccagcactggctcaaggacatgcgctt 243 ||| |||||||| |||||| |||||| |||||||||| ||||||||||||||| Sbjct: 33729 cgtcctcgccccgaccaacccgcgcgacgagcaccagcactggtacaaggacatgcgctt 33670 Query: 244 cagcaccaccgtcaaggacgaagagggcatgccggccttcgcgctcgtcaacaaggccac 303 |||| ||| |||||||||| ||||||| ||||| ||||||||||||||||||||||| Sbjct: 33669 cagcgccaagatcaaggacgaggagggcaacccggcgttcgcgctcgtcaacaaggccac 33610 Query: 304 cggcctcgccgtcaagcactccatcggccag 334 |||||||||| ||||||||||| |||||||| Sbjct: 33609 cggcctcgccatcaagcactccctcggccag 33579 Score = 119 bits (60), Expect = 9e-24 Identities = 87/96 (90%) Strand = Plus / Minus Query: 344 gtgaagctggtgccgttcaacccggcgtacgaggacgcgtcggtgctgtggacggagagc 403 |||||||||| |||||||||||||| |||| ||||| |||||||||||||||||||||| Sbjct: 33460 gtgaagctggcgccgttcaacccggagtacccggacgagtcggtgctgtggacggagagc 33401 Query: 404 aaggacgtgggcaagggcttccgctgcatccgcatg 439 |||||||||||| |||||||||||||||||||| Sbjct: 33400 ggcgacgtgggcaagagcttccgctgcatccgcatg 33365 Score = 93.7 bits (47), Expect = 5e-16 Identities = 89/103 (86%) Strand = Plus / Minus Query: 344 gtgaagctggtgccgttcaacccggcgtacgaggacgcgtcggtgctgtggacggagagc 403 |||||||||||||||| |||||| | ||| |||||| |||||||||||||||||||||| Sbjct: 32844 gtgaagctggtgccgtacaaccccggataccaggacgagtcggtgctgtggacggagagc 32785 Query: 404 aaggacgtgggcaagggcttccgctgcatccgcatggtcaaca 446 ||||| || | ||||||||||||||||||||||| |||| Sbjct: 32784 cgcgacgtcgggcacggcttccgctgcatccgcatggtgaaca 32742 Score = 50.1 bits (25), Expect = 0.007 Identities = 88/109 (80%) Strand = Plus / Minus Query: 217 ccagcactggctcaaggacatgcgcttcagcaccaccgtcaaggacgaagagggcatgcc 276 |||||||||| ||||||||||| | ||||| || | |||||||||| || ||| || Sbjct: 33080 ccagcactggatcaaggacatgaggcacagcaacagcatcaaggacgaggaaggctaccc 33021 Query: 277 ggccttcgcgctcgtcaacaaggccaccggcctcgccgtcaagcactcc 325 |||||||| |||||||||| || ||||||| ||| ||||||||||| Sbjct: 33020 cgccttcgccctcgtcaacagggtcaccggcgaggccatcaagcactcc 32972 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 58 caagatgttcgggttcgggcaccac 82 |||||||||||| |||||||||||| Sbjct: 33882 caagatgttcggcttcgggcaccac 33858
>gb|BT016654.1| Zea mays clone Contig487 mRNA sequence Length = 905 Score = 147 bits (74), Expect = 4e-32 Identities = 191/230 (83%) Strand = Plus / Plus Query: 217 ccagcactggctcaaggacatgcgcttcagcaccaccgtcaaggacgaagagggcatgcc 276 |||||||||| |||||||||||||| ||||| || |||||||||||| || || || Sbjct: 202 ccagcactggatcaaggacatgcgccacagcaacagcgtcaaggacgaggaagggtaccc 261 Query: 277 ggccttcgcgctcgtcaacaaggccaccggcctcgccgtcaagcactccatcggccagtc 336 |||||||||||||||||||| || ||||||| ||| ||||||||||| ||| || Sbjct: 262 ggccttcgcgctcgtcaacagggtcaccggcgaggccatcaagcactcccagggcgaggg 321 Query: 337 ccaccccgtgaagctggtgccgttcaacccggcgtacgaggacgcgtcggtgctgtggac 396 |||||| || ||||||||||| | |||||| | ||| |||||| ||||||||||||||| Sbjct: 322 ccacccggtcaagctggtgccctacaaccccggctaccaggacgagtcggtgctgtggac 381 Query: 397 ggagagcaaggacgtgggcaagggcttccgctgcatccgcatggtcaaca 446 ||||||| ||||| ||| | |||||||||||| ||||||||||||||| Sbjct: 382 ggagagccgcgacgtcggccacggcttccgctgcgtccgcatggtcaaca 431
>gb|DQ022951.1| Triticum aestivum stress responsive protein mRNA, complete cds Length = 846 Score = 147 bits (74), Expect = 4e-32 Identities = 230/282 (81%) Strand = Plus / Plus Query: 165 ccgtccgcgacggcgaggtcgtgctcgcccccgtcaaccccaaggacgagacccagcact 224 |||| ||| ||||| |||| ||||| || || | ||||||||||||||| |||||||| Sbjct: 198 ccgtgcgcaacggcaaggtggtgctggcgccggccaaccccaaggacgactaccagcact 257 Query: 225 ggctcaaggacatgcgcttcagcaccaccgtcaaggacgaagagggcatgccggccttcg 284 || ||||||||||| | | ||||||| | |||||||||| |||||| || ||||||| Sbjct: 258 ggatcaaggacatgaggtggagcaccagcatcaaggacgaggagggctaccccgccttcg 317 Query: 285 cgctcgtcaacaaggccaccggcctcgccgtcaagcactccatcggccagtcccaccccg 344 | | || |||||||||||||| | ||| ||||||||||| |||||||||| ||||| | Sbjct: 318 ccatggtgaacaaggccaccgggcaggccatcaagcactccctcggccagtcacaccctg 377 Query: 345 tgaagctggtgccgttcaacccggcgtacgaggacgcgtcggtgctgtggacggagagca 404 || |||||||||| |||||| | ||| ||||| ||||||||||||||||||||||| Sbjct: 378 tgcgtctggtgccgtacaacccagactacctggacgagtcggtgctgtggacggagagca 437 Query: 405 aggacgtgggcaagggcttccgctgcatccgcatggtcaaca 446 |||||||||||| || ||| | ||| | |||||||| |||| Sbjct: 438 gggacgtgggcaacgggttcaggtgcgtgcgcatggtgaaca 479
>gb|BT018086.1| Zea mays clone EL01N0552C09.c mRNA sequence Length = 666 Score = 119 bits (60), Expect = 9e-24 Identities = 225/280 (80%) Strand = Plus / Plus Query: 167 gtccgcgacggcgaggtcgtgctcgcccccgtcaaccccaaggacgagacccagcactgg 226 ||||||||||| |||| ||||| || || | ||||||||||||||| |||||||||| Sbjct: 29 gtccgcgacgggaaggtggtgctggcgccggcgaaccccaaggacgagtaccagcactgg 88 Query: 227 ctcaaggacatgcgcttcagcaccaccgtcaaggacgaagagggcatgccggccttcgcg 286 ||||||||||||| | ||||| | | |||||||||| || || ||||| |||||| Sbjct: 89 atcaaggacatgcggtggagcacgagcatcaaggacgaggaaggttacccggcgttcgcg 148 Query: 287 ctcgtcaacaaggccaccggcctcgccgtcaagcactccatcggccagtcccaccccgtg 346 || || |||||||| ||||| ||| |||||||||| | || ||||||||||| ||| Sbjct: 149 ctggtgaacaaggcgaccggggaggccatcaagcactcgctggggcagtcccacccggtg 208 Query: 347 aagctggtgccgttcaacccggcgtacgaggacgcgtcggtgctgtggacggagagcaag 406 |||||||| | |||||||| | ||||| |||||||||||||||||||||| Sbjct: 209 cgcctggtgccctacaacccggactttttggacgagtcggtgctgtggacggagagccgc 268 Query: 407 gacgtgggcaagggcttccgctgcatccgcatggtcaaca 446 ||||| ||||| |||||||||||| ||||||||||||||| Sbjct: 269 gacgtcggcaacggcttccgctgcgtccgcatggtcaaca 308
>emb|Y08988.1|OSR40G3 O.sativa osr40g3 gene Length = 1531 Score = 117 bits (59), Expect = 3e-23 Identities = 122/143 (85%) Strand = Plus / Plus Query: 200 aaccccaaggacgagacccagcactggctcaaggacatgcgcttcagcaccaccgtcaag 259 ||||||||||||||| |||||| ||| ||||||||||| | | ||||||| | ||||| Sbjct: 872 aaccccaaggacgagtaccagcattggatcaaggacatgaggtggagcaccagcatcaag 931 Query: 260 gacgaagagggcatgccggccttcgcgctcgtcaacaaggccaccggcctcgccgtcaag 319 ||||| |||||| || |||||||| |||||||||||||||||||||| ||| ||||| Sbjct: 932 gacgaggagggctaccctgccttcgccctcgtcaacaaggccaccggccaggccatcaag 991 Query: 320 cactccatcggccagtcccaccc 342 |||||| |||||||||| ||||| Sbjct: 992 cactccctcggccagtcacaccc 1014 Score = 61.9 bits (31), Expect = 2e-06 Identities = 61/71 (85%) Strand = Plus / Plus Query: 376 ggacgcgtcggtgctgtggacggagagcaaggacgtgggcaagggcttccgctgcatccg 435 ||||| |||||||||||||||||||||| |||||||| || || ||| | |||||||| Sbjct: 1130 ggacgagtcggtgctgtggacggagagccgcgacgtggggaacgggttcaggtgcatccg 1189 Query: 436 catggtcaaca 446 |||||| |||| Sbjct: 1190 catggtgaaca 1200
>ref|NM_183466.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1093 Score = 87.7 bits (44), Expect = 3e-14 Identities = 107/128 (83%) Strand = Plus / Plus Query: 284 gcgctcgtcaacaaggccaccggcctcgccgtcaagcactccatcggccagtcccacccc 343 |||||||||||||||||||||||| |||| ||||||||||||||||||| |||||||| Sbjct: 520 gcgctcgtcaacaaggccaccggcgacgccctcaagcactccatcggccaatcccaccct 579 Query: 344 gtgaagctggtgccgttcaacccggcgtacgaggacgcgtcggtgctgtggacggagagc 403 || |||||| | ||| || | |||| ||||| ||| |||||||||||||||||| Sbjct: 580 gtccgtttggtgcgctacaatccagagtacatggacgagtctgtgctgtggacggagagc 639 Query: 404 aaggacgt 411 | |||||| Sbjct: 640 agggacgt 647
>dbj|AK104820.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-041-A11, full insert sequence Length = 1093 Score = 87.7 bits (44), Expect = 3e-14 Identities = 107/128 (83%) Strand = Plus / Plus Query: 284 gcgctcgtcaacaaggccaccggcctcgccgtcaagcactccatcggccagtcccacccc 343 |||||||||||||||||||||||| |||| ||||||||||||||||||| |||||||| Sbjct: 520 gcgctcgtcaacaaggccaccggcgacgccctcaagcactccatcggccaatcccaccct 579 Query: 344 gtgaagctggtgccgttcaacccggcgtacgaggacgcgtcggtgctgtggacggagagc 403 || |||||| | ||| || | |||| ||||| ||| |||||||||||||||||| Sbjct: 580 gtccgtttggtgcgctacaatccagagtacatggacgagtctgtgctgtggacggagagc 639 Query: 404 aaggacgt 411 | |||||| Sbjct: 640 agggacgt 647
>dbj|AK104555.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-305-F10, full insert sequence Length = 1088 Score = 87.7 bits (44), Expect = 3e-14 Identities = 107/128 (83%) Strand = Plus / Plus Query: 284 gcgctcgtcaacaaggccaccggcctcgccgtcaagcactccatcggccagtcccacccc 343 |||||||||||||||||||||||| |||| ||||||||||||||||||| |||||||| Sbjct: 517 gcgctcgtcaacaaggccaccggcgacgccctcaagcactccatcggccaatcccaccct 576 Query: 344 gtgaagctggtgccgttcaacccggcgtacgaggacgcgtcggtgctgtggacggagagc 403 || |||||| | ||| || | |||| ||||| ||| |||||||||||||||||| Sbjct: 577 gtccgtttggtgcgctacaatccagagtacatggacgagtctgtgctgtggacggagagc 636 Query: 404 aaggacgt 411 | |||||| Sbjct: 637 agggacgt 644
>dbj|AK071375.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023095C18, full insert sequence Length = 1392 Score = 87.7 bits (44), Expect = 3e-14 Identities = 107/128 (83%) Strand = Plus / Plus Query: 284 gcgctcgtcaacaaggccaccggcctcgccgtcaagcactccatcggccagtcccacccc 343 |||||||||||||||||||||||| |||| ||||||||||||||||||| |||||||| Sbjct: 803 gcgctcgtcaacaaggccaccggcgacgccctcaagcactccatcggccaatcccaccct 862 Query: 344 gtgaagctggtgccgttcaacccggcgtacgaggacgcgtcggtgctgtggacggagagc 403 || |||||| | ||| || | |||| ||||| ||| |||||||||||||||||| Sbjct: 863 gtccgtttggtgcgctacaatccagagtacatggacgagtctgtgctgtggacggagagc 922 Query: 404 aaggacgt 411 | |||||| Sbjct: 923 agggacgt 930
>dbj|AK060132.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-C04, full insert sequence Length = 1220 Score = 87.7 bits (44), Expect = 3e-14 Identities = 107/128 (83%) Strand = Plus / Plus Query: 284 gcgctcgtcaacaaggccaccggcctcgccgtcaagcactccatcggccagtcccacccc 343 |||||||||||||||||||||||| |||| ||||||||||||||||||| |||||||| Sbjct: 560 gcgctcgtcaacaaggccaccggcgacgccctcaagcactccatcggccaatcccaccct 619 Query: 344 gtgaagctggtgccgttcaacccggcgtacgaggacgcgtcggtgctgtggacggagagc 403 || |||||| | ||| || | |||| ||||| ||| |||||||||||||||||| Sbjct: 620 gtccgtttggtgcgctacaatccagagtacatggacgagtctgtgctgtggacggagagc 679 Query: 404 aaggacgt 411 | |||||| Sbjct: 680 agggacgt 687
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 85.7 bits (43), Expect = 1e-13 Identities = 55/59 (93%) Strand = Plus / Plus Query: 284 gcgctcgtcaacaaggccaccggcctcgccgtcaagcactccatcggccagtcccaccc 342 |||||||||||||||||||||||| |||| ||||||||||||||||||| |||||||| Sbjct: 226805 gcgctcgtcaacaaggccaccggcgacgccctcaagcactccatcggccaatcccaccc 226863 Score = 48.1 bits (24), Expect = 0.026 Identities = 33/36 (91%) Strand = Plus / Plus Query: 376 ggacgcgtcggtgctgtggacggagagcaaggacgt 411 ||||| ||| ||||||||||||||||||| |||||| Sbjct: 227589 ggacgagtctgtgctgtggacggagagcagggacgt 227624 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 ggcgccggcggcgtccggcc 113 |||||||||||||||||||| Sbjct: 32027456 ggcgccggcggcgtccggcc 32027437
>dbj|AP002818.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0436E04 Length = 144644 Score = 85.7 bits (43), Expect = 1e-13 Identities = 55/59 (93%) Strand = Plus / Plus Query: 284 gcgctcgtcaacaaggccaccggcctcgccgtcaagcactccatcggccagtcccaccc 342 |||||||||||||||||||||||| |||| ||||||||||||||||||| |||||||| Sbjct: 68475 gcgctcgtcaacaaggccaccggcgacgccctcaagcactccatcggccaatcccaccc 68533 Score = 48.1 bits (24), Expect = 0.026 Identities = 33/36 (91%) Strand = Plus / Plus Query: 376 ggacgcgtcggtgctgtggacggagagcaaggacgt 411 ||||| ||| ||||||||||||||||||| |||||| Sbjct: 69259 ggacgagtctgtgctgtggacggagagcagggacgt 69294
>gb|BT017211.1| Zea mays clone EL01N0372B08.c mRNA sequence Length = 567 Score = 79.8 bits (40), Expect = 7e-12 Identities = 85/100 (85%) Strand = Plus / Plus Query: 347 aagctggtgccgttcaacccggcgtacgaggacgcgtcggtgctgtggacggagagcaag 406 ||||||||||| | |||||| | ||| |||||| |||||||||||||||||||| | Sbjct: 16 aagctggtgccctacaaccccggttaccaggacgagtcggtgctgtggacggagaaccgc 75 Query: 407 gacgtgggcaagggcttccgctgcatccgcatggtcaaca 446 ||||| ||| | |||||||||||| ||||||||||||||| Sbjct: 76 gacgtcggccacggcttccgctgcgtccgcatggtcaaca 115
>gb|AC131375.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0015J03, complete sequence Length = 165933 Score = 60.0 bits (30), Expect = 7e-06 Identities = 72/86 (83%) Strand = Plus / Minus Query: 361 caacccggcgtacgaggacgcgtcggtgctgtggacggagagcaaggacgtgggcaaggg 420 |||||||| ||| |||| | ||||||||||||| ||||||||||| || | ||| | || Sbjct: 162069 caacccggagtaacaggatgagtcggtgctgtgggcggagagcaagaacatcggccacgg 162010 Query: 421 cttccgctgcatccgcatggtcaaca 446 |||||||||| |||| ||||| |||| Sbjct: 162009 cttccgctgcgtccggatggtgaaca 161984 Score = 44.1 bits (22), Expect = 0.41 Identities = 43/50 (86%) Strand = Plus / Minus Query: 281 ttcgcgctcgtcaacaaggccaccggcctcgccgtcaagcactccatcgg 330 |||||||| || |||||||||||| ||| ||| ||||||||||| |||| Sbjct: 162377 ttcgcgctggtgaacaaggccaccagccaagccatcaagcactccctcgg 162328
>gb|AC090488.3| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0081F12 from chromosome 10, complete sequence Length = 128388 Score = 60.0 bits (30), Expect = 7e-06 Identities = 72/86 (83%) Strand = Plus / Minus Query: 361 caacccggcgtacgaggacgcgtcggtgctgtggacggagagcaaggacgtgggcaaggg 420 |||||||| ||| |||| | ||||||||||||| ||||||||||| || | ||| | || Sbjct: 56136 caacccggagtaacaggatgagtcggtgctgtgggcggagagcaagaacatcggccacgg 56077 Query: 421 cttccgctgcatccgcatggtcaaca 446 |||||||||| |||| ||||| |||| Sbjct: 56076 cttccgctgcgtccggatggtgaaca 56051 Score = 44.1 bits (22), Expect = 0.41 Identities = 43/50 (86%) Strand = Plus / Minus Query: 281 ttcgcgctcgtcaacaaggccaccggcctcgccgtcaagcactccatcgg 330 |||||||| || |||||||||||| ||| ||| ||||||||||| |||| Sbjct: 56444 ttcgcgctggtgaacaaggccaccagccaagccatcaagcactccctcgg 56395
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 60.0 bits (30), Expect = 7e-06 Identities = 72/86 (83%) Strand = Plus / Minus Query: 361 caacccggcgtacgaggacgcgtcggtgctgtggacggagagcaaggacgtgggcaaggg 420 |||||||| ||| |||| | ||||||||||||| ||||||||||| || | ||| | || Sbjct: 4394528 caacccggagtaacaggatgagtcggtgctgtgggcggagagcaagaacatcggccacgg 4394469 Query: 421 cttccgctgcatccgcatggtcaaca 446 |||||||||| |||| ||||| |||| Sbjct: 4394468 cttccgctgcgtccggatggtgaaca 4394443 Score = 44.1 bits (22), Expect = 0.41 Identities = 43/50 (86%) Strand = Plus / Minus Query: 281 ttcgcgctcgtcaacaaggccaccggcctcgccgtcaagcactccatcgg 330 |||||||| || |||||||||||| ||| ||| ||||||||||| |||| Sbjct: 4394836 ttcgcgctggtgaacaaggccaccagccaagccatcaagcactccctcgg 4394787
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 60.0 bits (30), Expect = 7e-06 Identities = 72/86 (83%) Strand = Plus / Minus Query: 361 caacccggcgtacgaggacgcgtcggtgctgtggacggagagcaaggacgtgggcaaggg 420 |||||||| ||| |||| | ||||||||||||| ||||||||||| || | ||| | || Sbjct: 4395349 caacccggagtaacaggatgagtcggtgctgtgggcggagagcaagaacatcggccacgg 4395290 Query: 421 cttccgctgcatccgcatggtcaaca 446 |||||||||| |||| ||||| |||| Sbjct: 4395289 cttccgctgcgtccggatggtgaaca 4395264 Score = 44.1 bits (22), Expect = 0.41 Identities = 43/50 (86%) Strand = Plus / Minus Query: 281 ttcgcgctcgtcaacaaggccaccggcctcgccgtcaagcactccatcgg 330 |||||||| || |||||||||||| ||| ||| ||||||||||| |||| Sbjct: 4395657 ttcgcgctggtgaacaaggccaccagccaagccatcaagcactccctcgg 4395608
>gb|AY291460.1| Shuttle vector pNG168, complete sequence Length = 8960 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 165 ccgtccgcgacggcgaggtcgt 186 |||||||||||||||||||||| Sbjct: 8868 ccgtccgcgacggcgaggtcgt 8889
>gb|L26978.1|HLFINSVECB Shuttle vector pMLH3, complete sequence Length = 11291 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 165 ccgtccgcgacggcgaggtcgt 186 |||||||||||||||||||||| Sbjct: 8675 ccgtccgcgacggcgaggtcgt 8696
>gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, complete sequence Length = 3131724 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 172 cgacggcgaggtcgtgctcgcc 193 |||||||||||||||||||||| Sbjct: 2232615 cgacggcgaggtcgtgctcgcc 2232636
>gb|M83531.1|HLFHMGA H.volcanii 3-hydroxy-3-methylglutaryl coenzyme A reductase (hmg) gene, complete cds Length = 1890 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 165 ccgtccgcgacggcgaggtcgt 186 |||||||||||||||||||||| Sbjct: 310 ccgtccgcgacggcgaggtcgt 289
>emb|AL939108.1|SCO939108 Streptomyces coelicolor A3(2) complete genome; segment 5/29 Length = 339650 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 159 gcctcgccgtccgcgacggcgaggt 183 ||||||||||||||| ||||||||| Sbjct: 164567 gcctcgccgtccgcgtcggcgaggt 164543
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 169 ccgcgacggcgaggtcgtgctcgcc 193 |||||||||||| |||||||||||| Sbjct: 5220909 ccgcgacggcgacgtcgtgctcgcc 5220933
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 233 gacatgcgcttcagcaccaccgtca 257 ||||| ||||||||||||||||||| Sbjct: 825719 gacatccgcttcagcaccaccgtca 825695 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 291 tcaacaaggccaccggcctc 310 |||||||||||||||||||| Sbjct: 504472 tcaacaaggccaccggcctc 504453
>gb|AY724720.1| Mycobacterium mucogenicum strain ATCC 49650 preprotein translocase SecA1 (secA1) gene, partial cds Length = 700 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 166 cgtccgcgacggcgaggtcgt 186 ||||||||||||||||||||| Sbjct: 484 cgtccgcgacggcgaggtcgt 504
>gb|AY664416.1| Zea mays cultivar Mo17 locus bz, complete sequence Length = 203581 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 283 cgcgctcgtcaacaaggccaccggcctcg 311 |||||||| ||||||||||||| |||||| Sbjct: 171495 cgcgctcgccaacaaggccacctgcctcg 171523
>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome Length = 4109442 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 170 cgcgacggcgaggtcgtgct 189 |||||||||||||||||||| Sbjct: 58762 cgcgacggcgaggtcgtgct 58743
>ref|XM_463443.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1725 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 94 ggcgccggcggcgtccggcc 113 |||||||||||||||||||| Sbjct: 454 ggcgccggcggcgtccggcc 473
>gb|BC035897.1| Homo sapiens jumonji domain containing 3, mRNA (cDNA clone IMAGE:5240292), with apparent retained intron Length = 1864 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 83 cacaaggaccaggcgccggcggcg 106 |||||||||||||| ||||||||| Sbjct: 842 cacaaggaccaggctccggcggcg 865
>emb|AL596125.27| Mouse DNA sequence from clone RP23-5O23 on chromosome 11 Contains the Chd3 gene for chromodomain helicase DNA binding protein 3, five novel genes, the 3' end of the gene for a novel protein similar to dynein and four CpG islands, complete sequence Length = 165212 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 83 cacaaggaccaggcgccggcggcg 106 |||||||||||||| ||||||||| Sbjct: 56882 cacaaggaccaggctccggcggcg 56859
>emb|CR381576.10| Zebrafish DNA sequence from clone DKEY-245F17 in linkage group 17, complete sequence Length = 185749 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 14 cagctccaaccagtctagcc 33 |||||||||||||||||||| Sbjct: 88254 cagctccaaccagtctagcc 88273
>gb|AC104581.22| Homo sapiens chromosome 17, clone RP11-1099M24, complete sequence Length = 187718 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 83 cacaaggaccaggcgccggcggcg 106 |||||||||||||| ||||||||| Sbjct: 17042 cacaaggaccaggctccggcggcg 17065
>gb|AF459424.1| Rhodococcus sp. NCIMB 9784 flavin-type hydroxylase and cytochrome P450 RhF (P450RhF) genes, complete cds Length = 4411 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 162 tcgccgtccgcgacggcgaggtcg 185 ||||||||| |||||||||||||| Sbjct: 3948 tcgccgtcctcgacggcgaggtcg 3971
>ref|XM_945439.1| PREDICTED: Homo sapiens jumonji domain containing 3, transcript variant 4 (JMJD3), mRNA Length = 4757 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 83 cacaaggaccaggcgccggcggcg 106 |||||||||||||| ||||||||| Sbjct: 3765 cacaaggaccaggctccggcggcg 3788
>ref|XM_941783.1| PREDICTED: Homo sapiens jumonji domain containing 3, transcript variant 3 (JMJD3), mRNA Length = 6701 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 83 cacaaggaccaggcgccggcggcg 106 |||||||||||||| ||||||||| Sbjct: 5709 cacaaggaccaggctccggcggcg 5732
>ref|XM_933967.1| PREDICTED: Homo sapiens jumonji domain containing 3, transcript variant 2 (JMJD3), mRNA Length = 4756 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 83 cacaaggaccaggcgccggcggcg 106 |||||||||||||| ||||||||| Sbjct: 3765 cacaaggaccaggctccggcggcg 3788
>ref|XM_043272.10| PREDICTED: Homo sapiens jumonji domain containing 3, transcript variant 1 (JMJD3), mRNA Length = 6694 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 83 cacaaggaccaggcgccggcggcg 106 |||||||||||||| ||||||||| Sbjct: 5703 cacaaggaccaggctccggcggcg 5726
>ref|NM_001017426.1| Mus musculus jumonji domain containing 3 (Jmjd3), mRNA Length = 6654 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 83 cacaaggaccaggcgccggcggcg 106 |||||||||||||| ||||||||| Sbjct: 5619 cacaaggaccaggctccggcggcg 5642
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 284 gcgctcgtcaacaaggccaccggcctcg 311 ||||||| ||||||||||||| |||||| Sbjct: 4711906 gcgctcgccaacaaggccacctgcctcg 4711933
>dbj|AB103463.1| Streptomyces sp. AM-7161 medermycin biosynthetic gene cluster (med-ORF1 - 30) and ORF P - Z , partial and complete cds Length = 36202 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 94 ggcgccggcggcgtccggcc 113 |||||||||||||||||||| Sbjct: 10201 ggcgccggcggcgtccggcc 10220
>gb|AC079782.6| Homo sapiens BAC clone RP11-385J23 from 2, complete sequence Length = 85411 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 406 ggacgtgggcaagggcttcc 425 |||||||||||||||||||| Sbjct: 27538 ggacgtgggcaagggcttcc 27557
>dbj|AP003274.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0512C01 Length = 176261 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 ggcgccggcggcgtccggcc 113 |||||||||||||||||||| Sbjct: 69270 ggcgccggcggcgtccggcc 69251
>gb|AE004481.1| Pseudomonas aeruginosa PAO1, section 42 of 529 of the complete genome Length = 11276 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 295 caaggccaccggcctcgccgtcaa 318 ||||||||||||||||| |||||| Sbjct: 2879 caaggccaccggcctcgacgtcaa 2856
>gb|AC137070.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0035J18, from chromsome 3, complete sequence Length = 162711 Score = 40.1 bits (20), Expect = 6.4 Identities = 38/44 (86%) Strand = Plus / Minus Query: 281 ttcgcgctcgtcaacaaggccaccggcctcgccgtcaagcactc 324 ||||||||||| || |||||||||||| ||| |||||||||| Sbjct: 58075 ttcgcgctcgtgaataaggccaccggcgaagccatcaagcactc 58032
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 296 aaggccaccggcctcgccgt 315 |||||||||||||||||||| Sbjct: 4674194 aaggccaccggcctcgccgt 4674213 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 172 cgacggcgaggtcgtgctcg 191 |||||||||||||||||||| Sbjct: 740437 cgacggcgaggtcgtgctcg 740456
>dbj|AP003514.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0698A06 Length = 156514 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 284 gcgctcgtcaacaaggccaccggcctcg 311 ||||||| ||||||||||||| |||||| Sbjct: 74505 gcgctcgccaacaaggccacctgcctcg 74532
>dbj|AK109619.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-138-A03, full insert sequence Length = 2768 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 ggcgccggcggcgtccggcc 113 |||||||||||||||||||| Sbjct: 1957 ggcgccggcggcgtccggcc 1938
>dbj|AK105550.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-128-A10, full insert sequence Length = 1834 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 94 ggcgccggcggcgtccggcc 113 |||||||||||||||||||| Sbjct: 462 ggcgccggcggcgtccggcc 481
>gb|CP000009.1| Gluconobacter oxydans 621H, complete genome Length = 2702173 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 410 gtgggcaagggcttccgctgcatc 433 ||||||||||||||||||| |||| Sbjct: 1459788 gtgggcaagggcttccgctccatc 1459765
>emb|AL928980.7| Zebrafish DNA sequence from clone DKEY-77M16 in linkage group 11, complete sequence Length = 167387 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 15 agctccaaccagtctagccg 34 |||||||||||||||||||| Sbjct: 57110 agctccaaccagtctagccg 57129
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome Length = 6181863 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 259 ggacgaagagggcatgccgg 278 |||||||||||||||||||| Sbjct: 1060107 ggacgaagagggcatgccgg 1060126
>dbj|AB070949.1| Streptomyces avermitilis polyene macrolide biosynthetic gene cluster Length = 78210 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 291 tcaacaaggccaccggcctc 310 |||||||||||||||||||| Sbjct: 60386 tcaacaaggccaccggcctc 60405
>dbj|AB002344.2| Human mRNA for KIAA0346 gene, partial cds Length = 6698 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 83 cacaaggaccaggcgccggcggcg 106 |||||||||||||| ||||||||| Sbjct: 5714 cacaaggaccaggctccggcggcg 5737
>dbj|AP003256.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0460E08 Length = 170021 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 ggcgccggcggcgtccggcc 113 |||||||||||||||||||| Sbjct: 124183 ggcgccggcggcgtccggcc 124164 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,092,987 Number of Sequences: 3902068 Number of extensions: 3092987 Number of successful extensions: 57195 Number of sequences better than 10.0: 73 Number of HSP's better than 10.0 without gapping: 73 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 56115 Number of HSP's gapped (non-prelim): 1046 length of query: 474 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 452 effective length of database: 17,147,199,772 effective search space: 7750534296944 effective search space used: 7750534296944 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
