ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast79a10
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1SUIS_HUMAN (P14410) Sucrase-isomaltase, intestinal [Contains: Su... 29 6.3
2ILVE_STRCO (O86505) Probable branched-chain-amino-acid aminotran... 28 8.2

>SUIS_HUMAN (P14410) Sucrase-isomaltase, intestinal [Contains: Sucrase (EC|
           3.2.1.48); Isomaltase (EC 3.2.1.10)]
          Length = 1826

 Score = 28.9 bits (63), Expect = 6.3
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = -2

Query: 65  SCVQDQATARGSAADAGCCWR 3
           +C+ +Q    G  A  GCCWR
Sbjct: 75  NCIPEQFPTEGICAQRGCCWR 95



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>ILVE_STRCO (O86505) Probable branched-chain-amino-acid aminotransferase (EC|
           2.6.1.42) (BCAT)
          Length = 362

 Score = 28.5 bits (62), Expect = 8.2
 Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
 Frame = +3

Query: 195 SSPTVAYHPS---PISCSLSSDHERSRGGGLRRACSDGNLAA 311
           +SP  AY P    P+S  +S D  R+  GG+  A + GN AA
Sbjct: 168 ASPAGAYFPGGVKPVSIWVSEDRVRAVPGGMGDAKTGGNYAA 209


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 34,220,635
Number of Sequences: 219361
Number of extensions: 402299
Number of successful extensions: 1474
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1440
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1472
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2793557952
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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