ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast79a08 |
|---|---|
| Clone Library Name | barley_pub |
>TRMB_ARATH (Q8GXB7) Probable tRNA (guanine-N(7)-)-methyltransferase (EC| 2.1.1.33) (tRNA(m7G46)-methyltransferase) Length = 251 Score = 73.2 bits (178), Expect = 4e-13 Identities = 32/39 (82%), Positives = 35/39 (89%) Frame = +2 Query: 227 LPRKRFYRARAHSNPLSDSHFPIPISPDDVDLSQHYPRY 343 LPRKRFYRARAHSNPLSDSHFPIPISP VD S H+P++ Sbjct: 16 LPRKRFYRARAHSNPLSDSHFPIPISPAHVDYSLHFPKF 54
>TRM8_YEAST (Q12009) tRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.33)| (tRNA(m7G46)-methyltransferase) Length = 286 Score = 55.1 bits (131), Expect = 1e-07 Identities = 23/39 (58%), Positives = 28/39 (71%) Frame = +2 Query: 227 LPRKRFYRARAHSNPLSDSHFPIPISPDDVDLSQHYPRY 343 LP+KR+YR RAHSNP SD P+SP D+D S+ YP Y Sbjct: 47 LPKKRYYRQRAHSNPFSDHQLEYPVSPQDMDWSKLYPYY 85
>TRMB_MOUSE (Q9Z120) tRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.33)| (tRNA(m7G46)-methyltransferase) (Methyltransferase-like protein 1) Length = 268 Score = 52.8 bits (125), Expect = 5e-07 Identities = 27/84 (32%), Positives = 39/84 (46%), Gaps = 3/84 (3%) Frame = +2 Query: 230 PRKRFYRARAHSNPLSDSHFPIPISPDDVDLSQHYPRYFP---XXXXXXXXXXXXXXXXX 400 P+KR+YR RAHSNP++D P+ P+++D S+ YP +F Sbjct: 10 PQKRYYRQRAHSNPMADHTLRYPVKPEEMDWSELYPEFFAPLIQNKSHDDPKDEKEKHSG 69 Query: 401 PRIRFADXXXXXXXXXXXXSPLFP 472 ++ FAD SPLFP Sbjct: 70 AQVEFADIGCGYGGLLVALSPLFP 93
>TRMB_HUMAN (Q9UBP6) tRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.33)| (tRNA(m7G46)-methyltransferase) (Methyltransferase-like protein 1) Length = 276 Score = 52.8 bits (125), Expect = 5e-07 Identities = 27/84 (32%), Positives = 39/84 (46%), Gaps = 3/84 (3%) Frame = +2 Query: 230 PRKRFYRARAHSNPLSDSHFPIPISPDDVDLSQHYPRYFPXXXXXXXX---XXXXXXXXX 400 P+KR+YR RAHSNP++D P+ P+++D S+ YP +F Sbjct: 16 PQKRYYRQRAHSNPMADHTLRYPVKPEEMDWSELYPEFFAPLTQNQSHDDPKDKKEKRAQ 75 Query: 401 PRIRFADXXXXXXXXXXXXSPLFP 472 ++ FAD SPLFP Sbjct: 76 AQVEFADIGCGYGGLLVELSPLFP 99
>TRMB_DROME (O77263) Probable tRNA (guanine-N(7)-)-methyltransferase (EC| 2.1.1.33) (tRNA(m7G46)-methyltransferase) Length = 256 Score = 50.8 bits (120), Expect = 2e-06 Identities = 21/37 (56%), Positives = 26/37 (70%) Frame = +2 Query: 227 LPRKRFYRARAHSNPLSDSHFPIPISPDDVDLSQHYP 337 LP+KR+YR RAHSNP++D F P P+DVD YP Sbjct: 29 LPQKRYYRQRAHSNPIADHSFDYPARPEDVDWRSMYP 65
>TRMB_SCHPO (Q96WV1) Probable tRNA (guanine-N(7)-)-methyltransferase (EC| 2.1.1.33) (tRNA(m7G46)-methyltransferase) Length = 273 Score = 44.7 bits (104), Expect = 1e-04 Identities = 19/40 (47%), Positives = 26/40 (65%) Frame = +2 Query: 224 KLPRKRFYRARAHSNPLSDSHFPIPISPDDVDLSQHYPRY 343 +LP KR +R RAH+N LSD P SP ++D S +YP + Sbjct: 35 RLPMKRLFRQRAHANVLSDHELEYPRSPSEMDWSPYYPDF 74
>TRMB_CAEEL (Q23126) Probable tRNA (guanine-N(7)-)-methyltransferase (EC| 2.1.1.33) (tRNA(m7G46)-methyltransferase) Length = 256 Score = 43.9 bits (102), Expect = 2e-04 Identities = 18/39 (46%), Positives = 27/39 (69%) Frame = +2 Query: 227 LPRKRFYRARAHSNPLSDSHFPIPISPDDVDLSQHYPRY 343 LP+K+ YR RAHSNP SD P++P+ +D +++Y Y Sbjct: 24 LPQKKHYRQRAHSNPHSDHDIEYPLTPNHMDWTKYYGDY 62
>Y093_MYCTU (Q10890) Hypothetical protein Rv0093c/MT0102| Length = 282 Score = 29.6 bits (65), Expect = 4.6 Identities = 14/42 (33%), Positives = 20/42 (47%) Frame = -1 Query: 178 HLAKAARGSVGFPACFAGESKGVAPRR*AVREGADCELSRRS 53 H + +G G PA E G R A +G DCE++R + Sbjct: 14 HASTVLQGCRGVPAAMWSEPAGAIRRHCATIDGMDCEVAREA 55
>PUR1_SHIFL (P0AG17) Amidophosphoribosyltransferase (EC 2.4.2.14) (Glutamine| phosphoribosylpyrophosphate amidotransferase) (ATASE) (GPATase) Length = 504 Score = 29.3 bits (64), Expect = 6.0 Identities = 14/38 (36%), Positives = 20/38 (52%) Frame = +2 Query: 224 KLPRKRFYRARAHSNPLSDSHFPIPISPDDVDLSQHYP 337 +L +K F R H N SDS + I ++D +HYP Sbjct: 109 ELRKKLFEEKRRHINTTSDSEILLNIFASELDNFRHYP 146
>PUR1_ECOLI (P0AG16) Amidophosphoribosyltransferase (EC 2.4.2.14) (Glutamine| phosphoribosylpyrophosphate amidotransferase) (ATASE) (GPATase) Length = 504 Score = 29.3 bits (64), Expect = 6.0 Identities = 14/38 (36%), Positives = 20/38 (52%) Frame = +2 Query: 224 KLPRKRFYRARAHSNPLSDSHFPIPISPDDVDLSQHYP 337 +L +K F R H N SDS + I ++D +HYP Sbjct: 109 ELRKKLFEEKRRHINTTSDSEILLNIFASELDNFRHYP 146
>FLIP1_RAT (Q8K4T4) Filamin-A-interacting protein 1 (FILIP)| Length = 1212 Score = 29.3 bits (64), Expect = 6.0 Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 3/35 (8%) Frame = +2 Query: 89 DGSSARRNPLRLP---GEAGGEPDAAPRGLGQMTR 184 DGSS R P R+P G G+P A G G +T+ Sbjct: 1148 DGSSQRPTPTRIPMSKGMKAGKPVVAASGAGNLTK 1182
>FLIP1_MOUSE (Q9CS72) Filamin-A-interacting protein 1 (FILIP)| Length = 1211 Score = 28.9 bits (63), Expect = 7.8 Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 3/35 (8%) Frame = +2 Query: 89 DGSSARRNPLRLP---GEAGGEPDAAPRGLGQMTR 184 DGSS R P R+P G G+P A G G +T+ Sbjct: 1147 DGSSQRPTPTRIPMSKGMKAGKPVVAAPGAGNLTK 1181
>FLIP1_HUMAN (Q7Z7B0) Filamin-A-interacting protein 1 (FILIP)| Length = 1213 Score = 28.9 bits (63), Expect = 7.8 Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 3/35 (8%) Frame = +2 Query: 89 DGSSARRNPLRLP---GEAGGEPDAAPRGLGQMTR 184 DGSS R P R+P G G+P A G G +T+ Sbjct: 1149 DGSSQRPTPTRIPMSKGMKAGKPVVAAPGAGNLTK 1183 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 35,544,127 Number of Sequences: 219361 Number of extensions: 504050 Number of successful extensions: 2276 Number of sequences better than 10.0: 13 Number of HSP's better than 10.0 without gapping: 2090 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2275 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3465624120 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
