ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast79a05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_191514.1| Oryza sativa (japonica cultivar-group), predic... 293 3e-76
2dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 293 3e-76
3dbj|AP003368.2| Oryza sativa (japonica cultivar-group) genomic D... 293 3e-76
4dbj|AK072280.1| Oryza sativa (japonica cultivar-group) cDNA clon... 293 3e-76
5gb|AC130597.2| Oryza sativa (japonica cultivar-group) chromosome... 274 2e-70
6dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 274 2e-70
7dbj|AK060312.1| Oryza sativa (japonica cultivar-group) cDNA clon... 274 2e-70
8gb|BT017743.1| Zea mays clone EL01N0449E08.c mRNA sequence 258 1e-65
9gb|AY371488.1| Zea mays clone BAC 276N12-123C01, partial sequence 224 2e-55
10gb|BT016476.1| Zea mays clone Contig309 mRNA sequence 206 5e-50
11ref|XM_478654.1| Oryza sativa (japonica cultivar-group), mRNA 163 6e-37
12ref|XM_478653.1| Oryza sativa (japonica cultivar-group), mRNA 163 6e-37
13dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 163 6e-37
14dbj|AK109507.1| Oryza sativa (japonica cultivar-group) cDNA clon... 163 6e-37
15dbj|AK060720.1| Oryza sativa (japonica cultivar-group) cDNA clon... 163 6e-37
16dbj|AP005126.3| Oryza sativa (japonica cultivar-group) genomic D... 163 6e-37
17gb|AY104155.1| Zea mays PCO077380 mRNA sequence 125 1e-25
18gb|AY104923.1| Zea mays PCO144363 mRNA sequence 50 0.007
19ref|XM_480848.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.40
20dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.40
21dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.40
22dbj|AP005603.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.40
23dbj|AP004648.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.40
24dbj|AK065586.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.40
25gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 44 0.40
26emb|AL731742.3|CNS08C7R Oryza sativa chromosome 12, . BAC OJ1123... 44 0.40
27ref|NM_192393.1| Oryza sativa (japonica cultivar-group), predic... 42 1.6
28ref|XM_532850.2| PREDICTED: Canis familiaris similar to odd Oz/t... 42 1.6
29ref|XM_852730.1| PREDICTED: Canis familiaris similar to odd Oz/t... 42 1.6
30ref|XM_852690.1| PREDICTED: Canis familiaris similar to odd Oz/t... 42 1.6
31emb|AL939126.1|SCO939126 Streptomyces coelicolor A3(2) complete ... 42 1.6
32gb|AY665904.1| Physalis minima isolate PMINM 18S ribosomal RNA g... 42 1.6
33gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome 42 1.6
34gb|AE004646.1| Pseudomonas aeruginosa PAO1, section 207 of 529 o... 42 1.6
35dbj|AP003710.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
36gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. ... 42 1.6
37gb|CP000032.1| Silicibacter pomeroyi DSS-3 plasmid megaplasmid, ... 40 6.3
38ref|XM_464429.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.3
39ref|XM_506741.1| PREDICTED Oryza sativa (japonica cultivar-group... 40 6.3
40gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence 40 6.3
41gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, compl... 40 6.3
42gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome 40 6.3
43gb|AC135562.3| Oryza sativa (japonica cultivar-group) chromosome... 40 6.3
44ref|XM_422007.1| PREDICTED: Gallus gallus similar to LOC129881 p... 40 6.3
45gb|BC044179.1| Danio rerio phosphoribosyl pyrophosphate syntheta... 40 6.3
46gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete ... 40 6.3
47gb|BC067543.1| Danio rerio phosphoribosyl pyrophosphate syntheta... 40 6.3
48emb|AL672141.12| Mouse DNA sequence from clone RP23-219C18 on ch... 40 6.3
49gb|AF533768.1| Cercopithecine herpesvirus 1 strain E2490, comple... 40 6.3
50ref|NM_213496.1| Danio rerio phosphoribosyl pyrophosphate synthe... 40 6.3
51gb|AE005727.1| Caulobacter crescentus CB15 section 53 of 359 of ... 40 6.3
52gb|CP000133.1| Rhizobium etli CFN 42, complete genome 40 6.3
53gb|AC092377.3| Homo sapiens chromosome 16 clone RP11-680G10, com... 40 6.3
54ref|NM_164719.1| Drosophila melanogaster CG32829-RA (CG32829), mRNA 40 6.3
55gb|AC099010.1| Drosophila melanogaster, chromosome 2L, region 27... 40 6.3
56emb|BX537342.6| Zebrafish DNA sequence from clone CH211-198P11 i... 40 6.3
57gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome 40 6.3
58dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.3
59gb|AC007977.12|AC007977 Drosophila melanogaster, chromosome 2L, ... 40 6.3
60dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.3
61gb|AC137834.9| Homo sapiens 12 BAC RP11-123K3 (Roswell Park Canc... 40 6.3
62dbj|AP001080.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.3
63dbj|AP003793.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.3
64dbj|AP005785.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.3
65dbj|AP000366.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.3
66dbj|AK120531.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.3
67dbj|AP004341.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.3
68emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome comple... 40 6.3
69dbj|AK065909.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.3
70dbj|AK061629.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.3
71gb|AE003615.3| Drosophila melanogaster chromosome 2L, section 24... 40 6.3
72gb|AF058419.1|HSLRPSS45 Homo sapiens lipoprotein receptor-relate... 40 6.3
73gb|DQ314873.1| Homo sapiens low density lipoprotein-related prot... 40 6.3
74gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome 40 6.3
75gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 6.3
76gb|AC004277.1|AC004277 Drosophila melanogaster DNA sequence (P1 ... 40 6.3 
>ref|NM_191514.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 819

 Score =  293 bits (148), Expect = 3e-76
 Identities = 251/286 (87%), Gaps = 12/286 (4%)
 Strand = Plus / Plus

                                                                       
Query: 190 cgctgccgccggtgcgcctcgcggcggggcaggcggcgac---------gatccagccct 240
           |||||||||||||||| |||||||||| |||||||||| |         |||||| ||| 
Sbjct: 65  cgctgccgccggtgcggctcgcggcggcgcaggcggcgtcggcggcggcgatccacccca 124

                                                                       
Query: 241 cctcgccgcgctacttcttctcctcgctggccggcaaggacgcctcctcccaccaccgcc 300
           |||||||||| ||||||||||||||||| || ||||   |||   ||||||  ||||| |
Sbjct: 125 cctcgccgcggtacttcttctcctcgctcgcgggcaccaacg---cctccccgcaccggc 181

                                                                       
Query: 301 gcatcgccatcgccgtcgacctctccgacgagtccgccttcgccgtgcgctgggccgtgc 360
           ||||||||||||||||||||||||||||||||||||| | |||||| || ||||||||||
Sbjct: 182 gcatcgccatcgccgtcgacctctccgacgagtccgcgtacgccgtccggtgggccgtgc 241

                                                                       
Query: 361 agaactacctgcgccccggcgacgccgtcgtgctcctccacgtgcgccccacctccgtcc 420
           |||||||||| |||||||| |||||||||||||||||||||||||| ||||||||||| |
Sbjct: 242 agaactacctccgccccggggacgccgtcgtgctcctccacgtgcggcccacctccgtgc 301

                                                         
Query: 421 tctacggcgccgactggggctccatccccgtctccgtcgccgacga 466
           |||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 302 tctacggcgccgactggggctccatccccgtctccgtctccgacga 347
to top
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  293 bits (148), Expect = 3e-76
 Identities = 251/286 (87%), Gaps = 12/286 (4%)
 Strand = Plus / Minus

                                                                            
Query: 190      cgctgccgccggtgcgcctcgcggcggggcaggcggcgac---------gatccagccct 240
                |||||||||||||||| |||||||||| |||||||||| |         |||||| ||| 
Sbjct: 33194679 cgctgccgccggtgcggctcgcggcggcgcaggcggcgtcggcggcggcgatccacccca 33194620

                                                                            
Query: 241      cctcgccgcgctacttcttctcctcgctggccggcaaggacgcctcctcccaccaccgcc 300
                |||||||||| ||||||||||||||||| || ||||   |||   ||||||  ||||| |
Sbjct: 33194619 cctcgccgcggtacttcttctcctcgctcgcgggcaccaacg---cctccccgcaccggc 33194563

                                                                            
Query: 301      gcatcgccatcgccgtcgacctctccgacgagtccgccttcgccgtgcgctgggccgtgc 360
                ||||||||||||||||||||||||||||||||||||| | |||||| || ||||||||||
Sbjct: 33194562 gcatcgccatcgccgtcgacctctccgacgagtccgcgtacgccgtccggtgggccgtgc 33194503

                                                                            
Query: 361      agaactacctgcgccccggcgacgccgtcgtgctcctccacgtgcgccccacctccgtcc 420
                |||||||||| |||||||| |||||||||||||||||||||||||| ||||||||||| |
Sbjct: 33194502 agaactacctccgccccggggacgccgtcgtgctcctccacgtgcggcccacctccgtgc 33194443

                                                              
Query: 421      tctacggcgccgactggggctccatccccgtctccgtcgccgacga 466
                |||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 33194442 tctacggcgccgactggggctccatccccgtctccgtctccgacga 33194397



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 368      cctgcgccccggcgacgccgt 388
                |||||||||||||||||||||
Sbjct: 26377205 cctgcgccccggcgacgccgt 26377225



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 103      cgcaaaaaccctagccagct 122
                ||||||||||||||||||||
Sbjct: 13217038 cgcaaaaaccctagccagct 13217019



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 188     ggcgctgccgccggtgcgcc 207
               ||||||||||||||||||||
Sbjct: 9052561 ggcgctgccgccggtgcgcc 9052580
to top
>dbj|AP003368.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:B1100D10
          Length = 152997

 Score =  293 bits (148), Expect = 3e-76
 Identities = 251/286 (87%), Gaps = 12/286 (4%)
 Strand = Plus / Minus

                                                                          
Query: 190    cgctgccgccggtgcgcctcgcggcggggcaggcggcgac---------gatccagccct 240
              |||||||||||||||| |||||||||| |||||||||| |         |||||| ||| 
Sbjct: 131589 cgctgccgccggtgcggctcgcggcggcgcaggcggcgtcggcggcggcgatccacccca 131530

                                                                          
Query: 241    cctcgccgcgctacttcttctcctcgctggccggcaaggacgcctcctcccaccaccgcc 300
              |||||||||| ||||||||||||||||| || ||||   |||   ||||||  ||||| |
Sbjct: 131529 cctcgccgcggtacttcttctcctcgctcgcgggcaccaacg---cctccccgcaccggc 131473

                                                                          
Query: 301    gcatcgccatcgccgtcgacctctccgacgagtccgccttcgccgtgcgctgggccgtgc 360
              ||||||||||||||||||||||||||||||||||||| | |||||| || ||||||||||
Sbjct: 131472 gcatcgccatcgccgtcgacctctccgacgagtccgcgtacgccgtccggtgggccgtgc 131413

                                                                          
Query: 361    agaactacctgcgccccggcgacgccgtcgtgctcctccacgtgcgccccacctccgtcc 420
              |||||||||| |||||||| |||||||||||||||||||||||||| ||||||||||| |
Sbjct: 131412 agaactacctccgccccggggacgccgtcgtgctcctccacgtgcggcccacctccgtgc 131353

                                                            
Query: 421    tctacggcgccgactggggctccatccccgtctccgtcgccgacga 466
              |||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 131352 tctacggcgccgactggggctccatccccgtctccgtctccgacga 131307
to top
>dbj|AK072280.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023018C18, full
           insert sequence
          Length = 1337

 Score =  293 bits (148), Expect = 3e-76
 Identities = 251/286 (87%), Gaps = 12/286 (4%)
 Strand = Plus / Plus

                                                                       
Query: 190 cgctgccgccggtgcgcctcgcggcggggcaggcggcgac---------gatccagccct 240
           |||||||||||||||| |||||||||| |||||||||| |         |||||| ||| 
Sbjct: 315 cgctgccgccggtgcggctcgcggcggcgcaggcggcgtcggcggcggcgatccacccca 374

                                                                       
Query: 241 cctcgccgcgctacttcttctcctcgctggccggcaaggacgcctcctcccaccaccgcc 300
           |||||||||| ||||||||||||||||| || ||||   |||   ||||||  ||||| |
Sbjct: 375 cctcgccgcggtacttcttctcctcgctcgcgggcaccaacg---cctccccgcaccggc 431

                                                                       
Query: 301 gcatcgccatcgccgtcgacctctccgacgagtccgccttcgccgtgcgctgggccgtgc 360
           ||||||||||||||||||||||||||||||||||||| | |||||| || ||||||||||
Sbjct: 432 gcatcgccatcgccgtcgacctctccgacgagtccgcgtacgccgtccggtgggccgtgc 491

                                                                       
Query: 361 agaactacctgcgccccggcgacgccgtcgtgctcctccacgtgcgccccacctccgtcc 420
           |||||||||| |||||||| |||||||||||||||||||||||||| ||||||||||| |
Sbjct: 492 agaactacctccgccccggggacgccgtcgtgctcctccacgtgcggcccacctccgtgc 551

                                                         
Query: 421 tctacggcgccgactggggctccatccccgtctccgtcgccgacga 466
           |||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 552 tctacggcgccgactggggctccatccccgtctccgtctccgacga 597
to top
>gb|AC130597.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0017K09, complete sequence
          Length = 155525

 Score =  274 bits (138), Expect = 2e-70
 Identities = 174/186 (93%)
 Strand = Plus / Plus

                                                                         
Query: 281   cgcctcctcccaccaccgccgcatcgccatcgccgtcgacctctccgacgagtccgcctt 340
             |||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65462 cgcctcctccccgcaccgccgcatcgccatcgccgtcgacctctccgacgagtccgcctt 65521

                                                                         
Query: 341   cgccgtgcgctgggccgtgcagaactacctgcgccccggcgacgccgtcgtgctcctcca 400
             ||||||    ||| |||||||||||||||| ||||| |||||||||||||||||||||||
Sbjct: 65522 cgccgtcaagtggtccgtgcagaactacctccgcccgggcgacgccgtcgtgctcctcca 65581

                                                                         
Query: 401   cgtgcgccccacctccgtcctctacggcgccgactggggctccatccccgtctccgtcgc 460
             ||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||| 
Sbjct: 65582 cgtccgccccacctccgtgctctacggcgccgactggggctccatccccgtctccgtcga 65641

                   
Query: 461   cgacga 466
             ||||||
Sbjct: 65642 cgacga 65647



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 68/78 (87%)
 Strand = Plus / Plus

                                                                         
Query: 194   gccgccggtgcgcctcgcggcggggcaggcggcgacgatccagccctcctcgccgcgcta 253
             ||||||||||||||| |||| |||   ||||||| |||||||||||  ||||||||| | 
Sbjct: 65369 gccgccggtgcgcctggcggggggtgcggcggcggcgatccagcccaactcgccgcggtt 65428

                               
Query: 254   cttcttctcctcgctggc 271
             ||||||||||||||||||
Sbjct: 65429 cttcttctcctcgctggc 65446
to top
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score =  274 bits (138), Expect = 2e-70
 Identities = 174/186 (93%)
 Strand = Plus / Plus

                                                                            
Query: 281      cgcctcctcccaccaccgccgcatcgccatcgccgtcgacctctccgacgagtccgcctt 340
                |||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24551280 cgcctcctccccgcaccgccgcatcgccatcgccgtcgacctctccgacgagtccgcctt 24551339

                                                                            
Query: 341      cgccgtgcgctgggccgtgcagaactacctgcgccccggcgacgccgtcgtgctcctcca 400
                ||||||    ||| |||||||||||||||| ||||| |||||||||||||||||||||||
Sbjct: 24551340 cgccgtcaagtggtccgtgcagaactacctccgcccgggcgacgccgtcgtgctcctcca 24551399

                                                                            
Query: 401      cgtgcgccccacctccgtcctctacggcgccgactggggctccatccccgtctccgtcgc 460
                ||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||| 
Sbjct: 24551400 cgtccgccccacctccgtgctctacggcgccgactggggctccatccccgtctccgtcga 24551459

                      
Query: 461      cgacga 466
                ||||||
Sbjct: 24551460 cgacga 24551465



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 68/78 (87%)
 Strand = Plus / Plus

                                                                            
Query: 194      gccgccggtgcgcctcgcggcggggcaggcggcgacgatccagccctcctcgccgcgcta 253
                ||||||||||||||| |||| |||   ||||||| |||||||||||  ||||||||| | 
Sbjct: 24551187 gccgccggtgcgcctggcggggggtgcggcggcggcgatccagcccaactcgccgcggtt 24551246

                                  
Query: 254      cttcttctcctcgctggc 271
                ||||||||||||||||||
Sbjct: 24551247 cttcttctcctcgctggc 24551264
to top
>dbj|AK060312.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-007-C02, full
           insert sequence
          Length = 1118

 Score =  274 bits (138), Expect = 2e-70
 Identities = 174/186 (93%)
 Strand = Plus / Plus

                                                                       
Query: 281 cgcctcctcccaccaccgccgcatcgccatcgccgtcgacctctccgacgagtccgcctt 340
           |||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 cgcctcctccccgcaccgccgcatcgccatcgccgtcgacctctccgacgagtccgcctt 305

                                                                       
Query: 341 cgccgtgcgctgggccgtgcagaactacctgcgccccggcgacgccgtcgtgctcctcca 400
           ||||||    ||| |||||||||||||||| ||||| |||||||||||||||||||||||
Sbjct: 306 cgccgtcaagtggtccgtgcagaactacctccgcccgggcgacgccgtcgtgctcctcca 365

                                                                       
Query: 401 cgtgcgccccacctccgtcctctacggcgccgactggggctccatccccgtctccgtcgc 460
           ||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||| 
Sbjct: 366 cgtccgccccacctccgtgctctacggcgccgactggggctccatccccgtctccgtcga 425

                 
Query: 461 cgacga 466
           ||||||
Sbjct: 426 cgacga 431



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 68/78 (87%)
 Strand = Plus / Plus

                                                                       
Query: 194 gccgccggtgcgcctcgcggcggggcaggcggcgacgatccagccctcctcgccgcgcta 253
           ||||||||||||||| |||| |||   ||||||| |||||||||||  ||||||||| | 
Sbjct: 153 gccgccggtgcgcctggcggggggtgcggcggcggcgatccagcccaactcgccgcggtt 212

                             
Query: 254 cttcttctcctcgctggc 271
           ||||||||||||||||||
Sbjct: 213 cttcttctcctcgctggc 230
to top
>gb|BT017743.1| Zea mays clone EL01N0449E08.c mRNA sequence
          Length = 1322

 Score =  258 bits (130), Expect = 1e-65
 Identities = 223/254 (87%)
 Strand = Plus / Plus

                                                                       
Query: 213 gcggggcaggcggcgacgatccagccctcctcgccgcgctacttcttctcctcgctggcc 272
           |||| |||||||||  ||||||||||||| || ||||||| ||||||||||||||| |||
Sbjct: 218 gcggcgcaggcggccgcgatccagccctcgtccccgcgcttcttcttctcctcgcttgcc 277

                                                                       
Query: 273 ggcaaggacgcctcctcccaccaccgccgcatcgccatcgccgtcgacctctccgacgag 332
           || |   || |  ||||||  ||||| ||||||||||||||||| || ||||||||||||
Sbjct: 278 gggaccaacccggcctccccgcaccgtcgcatcgccatcgccgttgatctctccgacgag 337

                                                                       
Query: 333 tccgccttcgccgtgcgctgggccgtgcagaactacctgcgccccggcgacgccgtcgtg 392
           ||||||||||| ||    |||||||||||||||||| | |||||||| ||||||||||||
Sbjct: 338 tccgccttcgcagtcaagtgggccgtgcagaactacgtccgccccggggacgccgtcgtg 397

                                                                       
Query: 393 ctcctccacgtgcgccccacctccgtcctctacggcgccgactggggctccatccccgtc 452
           || |||||||||||||||||||||||||||||||||||||||||||| |||||||| |||
Sbjct: 398 ctgctccacgtgcgccccacctccgtcctctacggcgccgactggggttccatcccggtc 457

                         
Query: 453 tccgtcgccgacga 466
           |||||||| |||||
Sbjct: 458 tccgtcgctgacga 471
to top
>gb|AY371488.1| Zea mays clone BAC 276N12-123C01, partial sequence
          Length = 213888

 Score =  224 bits (113), Expect = 2e-55
 Identities = 215/249 (86%)
 Strand = Plus / Minus

                                                                        
Query: 218  gcaggcggcgacgatccagccctcctcgccgcgctacttcttctcctcgctggccggcaa 277
            |||||||||  | ||||||||||| || ||||||| ||||||||||||||| | ||| | 
Sbjct: 4942 gcaggcggccgcaatccagccctcttccccgcgcttcttcttctcctcgcttgtcgggac 4883

                                                                        
Query: 278  ggacgcctcctcccaccaccgccgcatcgccatcgccgtcgacctctccgacgagtccgc 337
              || |  ||||||  ||||| ||||||||||||||||  || |||  ||||||||||||
Sbjct: 4882 caacccggcctccccgcaccgtcgcatcgccatcgccgctgatctcaacgacgagtccgc 4823

                                                                        
Query: 338  cttcgccgtgcgctgggccgtgcagaactacctgcgccccggcgacgccgtcgtgctcct 397
            |||||| ||    |||||||||||||||||||| |||||||| |||||||||||||| ||
Sbjct: 4822 cttcgcagtcaagtgggccgtgcagaactacctccgccccggggacgccgtcgtgctgct 4763

                                                                        
Query: 398  ccacgtgcgccccacctccgtcctctacggcgccgactggggctccatccccgtctccgt 457
            ||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 4762 ccatgtgcgccccacctccgtcctctacggcgccgactggggctccatcccggtctccgt 4703

                     
Query: 458  cgccgacga 466
            ||| |||||
Sbjct: 4702 cgctgacga 4694
to top
>gb|BT016476.1| Zea mays clone Contig309 mRNA sequence
          Length = 1258

 Score =  206 bits (104), Expect = 5e-50
 Identities = 137/148 (92%)
 Strand = Plus / Minus

                                                                       
Query: 293 ccaccgccgcatcgccatcgccgtcgacctctccgacgagtccgccttcgccgtgcgctg 352
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 982 ccaccgccgcatcgccatcgccgtcgacctctccgacgagtccgcctacgccgtgcgctg 923

                                                                       
Query: 353 ggccgtgcagaactacctgcgccccggcgacgccgtcgtgctcctccacgtgcgccccac 412
           ||||||    |||||||| |||||||| ||||||||| | || |||||||||||||||||
Sbjct: 922 ggccgtcgccaactacctccgccccggggacgccgtcatcctgctccacgtgcgccccac 863

                                       
Query: 413 ctccgtcctctacggcgccgactggggc 440
           |||||| |||||||||||||||||||||
Sbjct: 862 ctccgtgctctacggcgccgactggggc 835
to top
>ref|XM_478654.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1330

 Score =  163 bits (82), Expect = 6e-37
 Identities = 133/150 (88%)
 Strand = Plus / Plus

                                                                       
Query: 294 caccgccgcatcgccatcgccgtcgacctctccgacgagtccgccttcgccgtgcgctgg 353
           ||||||||||||||||||||||| |||||||||||||||||||| | |||||| ||||||
Sbjct: 221 caccgccgcatcgccatcgccgttgacctctccgacgagtccgcgtacgccgtccgctgg 280

                                                                       
Query: 354 gccgtgcagaactacctgcgccccggcgacgccgtcgtgctcctccacgtgcgccccacc 413
           |||||    |||||||| |||||||| ||||||||  | || || ||||| |||||||||
Sbjct: 281 gccgtcgccaactacctccgccccggggacgccgttatactgctgcacgtccgccccacc 340

                                         
Query: 414 tccgtcctctacggcgccgactggggctcc 443
           ||||| ||||||||||||||||||||||||
Sbjct: 341 tccgtgctctacggcgccgactggggctcc 370
to top
>ref|XM_478653.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1352

 Score =  163 bits (82), Expect = 6e-37
 Identities = 133/150 (88%)
 Strand = Plus / Plus

                                                                       
Query: 294 caccgccgcatcgccatcgccgtcgacctctccgacgagtccgccttcgccgtgcgctgg 353
           ||||||||||||||||||||||| |||||||||||||||||||| | |||||| ||||||
Sbjct: 266 caccgccgcatcgccatcgccgttgacctctccgacgagtccgcgtacgccgtccgctgg 325

                                                                       
Query: 354 gccgtgcagaactacctgcgccccggcgacgccgtcgtgctcctccacgtgcgccccacc 413
           |||||    |||||||| |||||||| ||||||||  | || || ||||| |||||||||
Sbjct: 326 gccgtcgccaactacctccgccccggggacgccgttatactgctgcacgtccgccccacc 385

                                         
Query: 414 tccgtcctctacggcgccgactggggctcc 443
           ||||| ||||||||||||||||||||||||
Sbjct: 386 tccgtgctctacggcgccgactggggctcc 415
to top
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score =  163 bits (82), Expect = 6e-37
 Identities = 133/150 (88%)
 Strand = Plus / Minus

                                                                            
Query: 294      caccgccgcatcgccatcgccgtcgacctctccgacgagtccgccttcgccgtgcgctgg 353
                ||||||||||||||||||||||| |||||||||||||||||||| | |||||| ||||||
Sbjct: 21844767 caccgccgcatcgccatcgccgttgacctctccgacgagtccgcgtacgccgtccgctgg 21844708

                                                                            
Query: 354      gccgtgcagaactacctgcgccccggcgacgccgtcgtgctcctccacgtgcgccccacc 413
                |||||    |||||||| |||||||| ||||||||  | || || ||||| |||||||||
Sbjct: 21844707 gccgtcgccaactacctccgccccggggacgccgttatactgctgcacgtccgccccacc 21844648

                                              
Query: 414      tccgtcctctacggcgccgactggggctcc 443
                ||||| ||||||||||||||||||||||||
Sbjct: 21844647 tccgtgctctacggcgccgactggggctcc 21844618



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 103      cgcaaaaaccctagccagct 122
                ||||||||||||||||||||
Sbjct: 25783338 cgcaaaaaccctagccagct 25783319
to top
>dbj|AK109507.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-101-E04, full
           insert sequence
          Length = 1351

 Score =  163 bits (82), Expect = 6e-37
 Identities = 133/150 (88%)
 Strand = Plus / Plus

                                                                       
Query: 294 caccgccgcatcgccatcgccgtcgacctctccgacgagtccgccttcgccgtgcgctgg 353
           ||||||||||||||||||||||| |||||||||||||||||||| | |||||| ||||||
Sbjct: 266 caccgccgcatcgccatcgccgttgacctctccgacgagtccgcgtacgccgtccgctgg 325

                                                                       
Query: 354 gccgtgcagaactacctgcgccccggcgacgccgtcgtgctcctccacgtgcgccccacc 413
           |||||    |||||||| |||||||| ||||||||  | || || ||||| |||||||||
Sbjct: 326 gccgtcgccaactacctccgccccggggacgccgttatactgctgcacgtccgccccacc 385

                                         
Query: 414 tccgtcctctacggcgccgactggggctcc 443
           ||||| ||||||||||||||||||||||||
Sbjct: 386 tccgtgctctacggcgccgactggggctcc 415
to top
>dbj|AK060720.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-031-F04, full
           insert sequence
          Length = 1330

 Score =  163 bits (82), Expect = 6e-37
 Identities = 133/150 (88%)
 Strand = Plus / Plus

                                                                       
Query: 294 caccgccgcatcgccatcgccgtcgacctctccgacgagtccgccttcgccgtgcgctgg 353
           ||||||||||||||||||||||| |||||||||||||||||||| | |||||| ||||||
Sbjct: 221 caccgccgcatcgccatcgccgttgacctctccgacgagtccgcgtacgccgtccgctgg 280

                                                                       
Query: 354 gccgtgcagaactacctgcgccccggcgacgccgtcgtgctcctccacgtgcgccccacc 413
           |||||    |||||||| |||||||| ||||||||  | || || ||||| |||||||||
Sbjct: 281 gccgtcgccaactacctccgccccggggacgccgttatactgctgcacgtccgccccacc 340

                                         
Query: 414 tccgtcctctacggcgccgactggggctcc 443
           ||||| ||||||||||||||||||||||||
Sbjct: 341 tccgtgctctacggcgccgactggggctcc 370
to top
>dbj|AP005126.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBb0041B22
          Length = 142446

 Score =  163 bits (82), Expect = 6e-37
 Identities = 133/150 (88%)
 Strand = Plus / Minus

                                                                         
Query: 294   caccgccgcatcgccatcgccgtcgacctctccgacgagtccgccttcgccgtgcgctgg 353
             ||||||||||||||||||||||| |||||||||||||||||||| | |||||| ||||||
Sbjct: 58443 caccgccgcatcgccatcgccgttgacctctccgacgagtccgcgtacgccgtccgctgg 58384

                                                                         
Query: 354   gccgtgcagaactacctgcgccccggcgacgccgtcgtgctcctccacgtgcgccccacc 413
             |||||    |||||||| |||||||| ||||||||  | || || ||||| |||||||||
Sbjct: 58383 gccgtcgccaactacctccgccccggggacgccgttatactgctgcacgtccgccccacc 58324

                                           
Query: 414   tccgtcctctacggcgccgactggggctcc 443
             ||||| ||||||||||||||||||||||||
Sbjct: 58323 tccgtgctctacggcgccgactggggctcc 58294
to top
>gb|AY104155.1| Zea mays PCO077380 mRNA sequence
          Length = 1011

 Score =  125 bits (63), Expect = 1e-25
 Identities = 78/83 (93%)
 Strand = Plus / Plus

                                                                       
Query: 384 gccgtcgtgctcctccacgtgcgccccacctccgtcctctacggcgccgactggggctcc 443
           ||||||||||| ||||||||||||||||||||||| |||||||||||||||||||| |||
Sbjct: 12  gccgtcgtgctgctccacgtgcgccccacctccgttctctacggcgccgactggggttcc 71

                                  
Query: 444 atccccgtctccgtcgccgacga 466
           ||||| ||||||||||| |||||
Sbjct: 72  atcccggtctccgtcgctgacga 94
to top
>gb|AY104923.1| Zea mays PCO144363 mRNA sequence
          Length = 982

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                            
Query: 434 ctggggctccatccccgtctccgtcgccgacga 466
           ||||||||||||||| |||||||||| ||||||
Sbjct: 1   ctggggctccatcccggtctccgtcgacgacga 33
to top
>ref|XM_480848.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 492

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 437 gggctccatccccgtctccgtcgccgacga 466
           |||||||||||| |||||||||| ||||||
Sbjct: 366 gggctccatccctgtctccgtcgacgacga 395
to top
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 229      cgatccagccctcctcgccgcg 250
                ||||||||||||||||||||||
Sbjct: 22160494 cgatccagccctcctcgccgcg 22160515
to top
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                             
Query: 437     gggctccatccccgtctccgtcgccgacga 466
               |||||||||||| |||||||||| ||||||
Sbjct: 8182897 gggctccatccctgtctccgtcgacgacga 8182868
to top
>dbj|AP005603.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:B1047A05
          Length = 157517

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                            
Query: 437    gggctccatccccgtctccgtcgccgacga 466
              |||||||||||| |||||||||| ||||||
Sbjct: 151208 gggctccatccctgtctccgtcgacgacga 151179
to top
>dbj|AP004648.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1449_H02
          Length = 117860

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                           
Query: 437   gggctccatccccgtctccgtcgccgacga 466
             |||||||||||| |||||||||| ||||||
Sbjct: 15579 gggctccatccctgtctccgtcgacgacga 15550
to top
>dbj|AK065586.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013034O12, full
           insert sequence
          Length = 3418

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 229 cgatccagccctcctcgccgcg 250
           ||||||||||||||||||||||
Sbjct: 67  cgatccagccctcctcgccgcg 88
to top
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 229      cgatccagccctcctcgccgcg 250
                ||||||||||||||||||||||
Sbjct: 22088839 cgatccagccctcctcgccgcg 22088860
to top
>emb|AL731742.3|CNS08C7R Oryza sativa chromosome 12, . BAC OJ1123_B09 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 155585

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 229   cgatccagccctcctcgccgcg 250
             ||||||||||||||||||||||
Sbjct: 92516 cgatccagccctcctcgccgcg 92495
to top
>ref|NM_192393.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1458

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 368  cctgcgccccggcgacgccgt 388
            |||||||||||||||||||||
Sbjct: 1264 cctgcgccccggcgacgccgt 1244
to top
>ref|XM_532850.2| PREDICTED: Canis familiaris similar to odd Oz/ten-m homolog 3,
            transcript variant 1 (LOC475637), mRNA
          Length = 8193

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 218  gcaggcggcgacgatccagccctcctcgc 246
            |||||||||| || |||||||||||||||
Sbjct: 2158 gcaggcggcgccggtccagccctcctcgc 2130
to top
>ref|XM_852730.1| PREDICTED: Canis familiaris similar to odd Oz/ten-m homolog 3,
            transcript variant 3 (LOC475637), mRNA
          Length = 8328

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 218  gcaggcggcgacgatccagccctcctcgc 246
            |||||||||| || |||||||||||||||
Sbjct: 2293 gcaggcggcgccggtccagccctcctcgc 2265
to top
>ref|XM_852690.1| PREDICTED: Canis familiaris similar to odd Oz/ten-m homolog 3,
            transcript variant 2 (LOC475637), mRNA
          Length = 8508

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 218  gcaggcggcgacgatccagccctcctcgc 246
            |||||||||| || |||||||||||||||
Sbjct: 2521 gcaggcggcgccggtccagccctcctcgc 2493
to top
>emb|AL939126.1|SCO939126 Streptomyces coelicolor A3(2) complete genome; segment 23/29
          Length = 295150

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 203    gcgcctcgcggcggggcaggcggcgacga 231
              |||| |||||||| |||||||||||||||
Sbjct: 181808 gcgcatcgcggcgcggcaggcggcgacga 181836
to top
>gb|AY665904.1| Physalis minima isolate PMINM 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, 5.8S ribosomal
           RNA gene gene, and internal transcribed spacer 2,
           complete sequence; and 26S ribosomal RNA gene, partial
           sequence
          Length = 633

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 152 cccctccccgtcggccggcgg 172
           |||||||||||||||||||||
Sbjct: 85  cccctccccgtcggccggcgg 105
to top
>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome
          Length = 4712337

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 218     gcaggcggcgacgatccagccctcc 242
               |||||||| ||||||||||||||||
Sbjct: 1397567 gcaggcggtgacgatccagccctcc 1397543
to top
>gb|AE004646.1| Pseudomonas aeruginosa PAO1, section 207 of 529 of the complete
           genome
          Length = 11244

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 180 ccgaccccggcgctgccgccg 200
           |||||||||||||||||||||
Sbjct: 615 ccgaccccggcgctgccgccg 595
to top
>dbj|AP003710.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OSJNBb0032K15
          Length = 126195

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 368   cctgcgccccggcgacgccgt 388
             |||||||||||||||||||||
Sbjct: 51070 cctgcgccccggcgacgccgt 51090
to top
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 190     cgctgccgccggtgcgcctcgcggc 214
               ||||||||||||||||| |||||||
Sbjct: 1709107 cgctgccgccggtgcgcatcgcggc 1709131
to top
>gb|CP000032.1| Silicibacter pomeroyi DSS-3 plasmid megaplasmid, complete sequence
          Length = 491611

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 181    cgaccccggcgctgccgccg 200
              ||||||||||||||||||||
Sbjct: 236712 cgaccccggcgctgccgccg 236731
to top
>ref|XM_464429.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 912

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 368 cctgcgccccggcgacgccgtcgtgctcctcc 399
           |||| ||| ||||||||||| |||||||||||
Sbjct: 506 cctgggcctcggcgacgccgacgtgctcctcc 537
to top
>ref|XM_506741.1| PREDICTED Oryza sativa (japonica cultivar-group), P0453H10.33 mRNA
          Length = 994

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 368 cctgcgccccggcgacgccgtcgtgctcctcc 399
           |||| ||| ||||||||||| |||||||||||
Sbjct: 504 cctgggcctcggcgacgccgacgtgctcctcc 535
to top
>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence
          Length = 3587082

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 375   cccggcgacgccgtcgtgct 394
             ||||||||||||||||||||
Sbjct: 18701 cccggcgacgccgtcgtgct 18720
to top
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome
          Length = 3188609

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 186     ccggcgctgccgccggtgcg 205
               ||||||||||||||||||||
Sbjct: 2097685 ccggcgctgccgccggtgcg 2097704
to top
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome
          Length = 6438405

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 365     ctacctgcgccccggcgacg 384
               ||||||||||||||||||||
Sbjct: 2906396 ctacctgcgccccggcgacg 2906377
to top
>gb|AC135562.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0087P19, complete sequence
          Length = 172066

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 103   cgcaaaaaccctagccagct 122
             ||||||||||||||||||||
Sbjct: 73508 cgcaaaaaccctagccagct 73527
to top
>ref|XM_422007.1| PREDICTED: Gallus gallus similar to LOC129881 protein (LOC424161),
            mRNA
          Length = 3873

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 352  gggccgtgcagaactacctg 371
            ||||||||||||||||||||
Sbjct: 2331 gggccgtgcagaactacctg 2312
to top
>gb|BC044179.1| Danio rerio phosphoribosyl pyrophosphate synthetase-associated
           protein 2, mRNA (cDNA clone MGC:55477 IMAGE:2640312),
           complete cds
          Length = 2292

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 139 cggccaactccaacccctcc 158
           ||||||||||||||||||||
Sbjct: 169 cggccaactccaacccctcc 188
to top
>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence
          Length = 3806533

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 365     ctacctgcgccccggcgacgccgt 388
               ||||||||||||||||||| ||||
Sbjct: 2585057 ctacctgcgccccggcgacaccgt 2585034
to top
>gb|BC067543.1| Danio rerio phosphoribosyl pyrophosphate synthetase-associated
           protein 2, mRNA (cDNA clone MGC:85610 IMAGE:6523980),
           complete cds
          Length = 2352

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 139 cggccaactccaacccctcc 158
           ||||||||||||||||||||
Sbjct: 166 cggccaactccaacccctcc 185
to top
>emb|AL672141.12| Mouse DNA sequence from clone RP23-219C18 on chromosome 11 Contains the
             3' end of the Hs3st3a gene for heparan sulfate
             (glucosamine) 3-O-sulfotransferase 3A and a CpG island,
             complete sequence
          Length = 153658

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 115   agccagctgcccagctcccc 134
             ||||||||||||||||||||
Sbjct: 93995 agccagctgcccagctcccc 93976
to top
>gb|AF533768.1| Cercopithecine herpesvirus 1 strain E2490, complete genome
          Length = 156789

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 371   gcgccccggcgacgccgtcgtgct 394
             |||||||| |||||||||||||||
Sbjct: 29999 gcgccccgtcgacgccgtcgtgct 29976
to top
>ref|NM_213496.1| Danio rerio phosphoribosyl pyrophosphate synthetase-associated
           protein 2 (prpsap2), mRNA
          Length = 2352

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 139 cggccaactccaacccctcc 158
           ||||||||||||||||||||
Sbjct: 166 cggccaactccaacccctcc 185
to top
>gb|AE005727.1| Caulobacter crescentus CB15 section 53 of 359 of the complete genome
          Length = 10545

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 334  ccgccttcgccgtgcgctgg 353
            ||||||||||||||||||||
Sbjct: 5837 ccgccttcgccgtgcgctgg 5856
to top
>gb|CP000133.1| Rhizobium etli CFN 42, complete genome
          Length = 4381608

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 185    cccggcgctgccgccggtgc 204
              ||||||||||||||||||||
Sbjct: 838360 cccggcgctgccgccggtgc 838341
to top
>gb|AC092377.3| Homo sapiens chromosome 16 clone RP11-680G10, complete sequence
          Length = 207283

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 436   ggggctccatccccgtctcc 455
             ||||||||||||||||||||
Sbjct: 24112 ggggctccatccccgtctcc 24093
to top
>ref|NM_164719.1| Drosophila melanogaster CG32829-RA (CG32829), mRNA
          Length = 705

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 235 agccctcctcgccgcgctacttcttctcctcg 266
           |||||| ||||||| ||| |||||||||||||
Sbjct: 655 agcccttctcgccgtgctccttcttctcctcg 624
to top
>gb|AC099010.1| Drosophila melanogaster, chromosome 2L, region 27B-27C, BAC clone
             BACR20B21, complete sequence
          Length = 166512

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 235   agccctcctcgccgcgctacttcttctcctcg 266
             |||||| ||||||| ||| |||||||||||||
Sbjct: 57091 agcccttctcgccgtgctccttcttctcctcg 57060
to top
>emb|BX537342.6| Zebrafish DNA sequence from clone CH211-198P11 in linkage group 3,
             complete sequence
          Length = 195436

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 139   cggccaactccaacccctcc 158
             ||||||||||||||||||||
Sbjct: 15599 cggccaactccaacccctcc 15580
to top
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome
          Length = 4352825

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 325    ccgacgagtccgccttcgccgtgcgctg 352
              |||||||| |||||||||||| ||||||
Sbjct: 972315 ccgacgaggccgccttcgccgagcgctg 972288
to top
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 103      cgcaaaaaccctagccagct 122
                ||||||||||||||||||||
Sbjct: 10177344 cgcaaaaaccctagccagct 10177363
to top
>gb|AC007977.12|AC007977 Drosophila melanogaster, chromosome 2L, region 27C-27C, BAC clone
             BACR13J07, complete sequence
          Length = 174287

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 235   agccctcctcgccgcgctacttcttctcctcg 266
             |||||| ||||||| ||| |||||||||||||
Sbjct: 22595 agcccttctcgccgtgctccttcttctcctcg 22626
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                               
Query: 368     cctgcgccccggcgacgccgtcgtgctcctcc 399
               |||| ||| ||||||||||| |||||||||||
Sbjct: 5167485 cctgggcctcggcgacgccgacgtgctcctcc 5167454
to top
>gb|AC137834.9| Homo sapiens 12 BAC RP11-123K3 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 109523

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 282   gcctcctcccaccaccgccg 301
             ||||||||||||||||||||
Sbjct: 96600 gcctcctcccaccaccgccg 96619
to top
>dbj|AP001080.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
             clone:P0499C11
          Length = 151369

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 188   ggcgctgccgccggtgcgcc 207
             ||||||||||||||||||||
Sbjct: 81568 ggcgctgccgccggtgcgcc 81587
to top
>dbj|AP003793.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0487E11
          Length = 151303

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 103   cgcaaaaaccctagccagct 122
             ||||||||||||||||||||
Sbjct: 89339 cgcaaaaaccctagccagct 89320
to top
>dbj|AP005785.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0453H10
          Length = 133464

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                              
Query: 368    cctgcgccccggcgacgccgtcgtgctcctcc 399
              |||| ||| ||||||||||| |||||||||||
Sbjct: 127983 cctgggcctcggcgacgccgacgtgctcctcc 127952
to top
>dbj|AP000366.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0437H03
          Length = 170173

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 368   cctgcgccccggcgacgccgtcgtgctcctcc 399
             |||| ||| ||||||||||| |||||||||||
Sbjct: 60938 cctgggcctcggcgacgccgacgtgctcctcc 60907
to top
>dbj|AK120531.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013127H23, full
           insert sequence
          Length = 6225

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 188 ggcgctgccgccggtgcgcc 207
           ||||||||||||||||||||
Sbjct: 391 ggcgctgccgccggtgcgcc 372
to top
>dbj|AP004341.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0524E08
          Length = 154696

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 103    cgcaaaaaccctagccagct 122
              ||||||||||||||||||||
Sbjct: 100500 cgcaaaaaccctagccagct 100481
to top
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence
          Length = 3716413

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 364     actacctgcgccccggcgac 383
               ||||||||||||||||||||
Sbjct: 2917971 actacctgcgccccggcgac 2917990
to top
>dbj|AK065909.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013043E11, full
           insert sequence
          Length = 912

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 368 cctgcgccccggcgacgccgtcgtgctcctcc 399
           |||| ||| ||||||||||| |||||||||||
Sbjct: 506 cctgggcctcggcgacgccgacgtgctcctcc 537
to top
>dbj|AK061629.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-H06, full
           insert sequence
          Length = 994

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 368 cctgcgccccggcgacgccgtcgtgctcctcc 399
           |||| ||| ||||||||||| |||||||||||
Sbjct: 504 cctgggcctcggcgacgccgacgtgctcctcc 535
to top
>gb|AE003615.3| Drosophila melanogaster chromosome 2L, section 24 of 83 of the complete
              sequence
          Length = 270751

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                              
Query: 235    agccctcctcgccgcgctacttcttctcctcg 266
              |||||| ||||||| ||| |||||||||||||
Sbjct: 159089 agcccttctcgccgtgctccttcttctcctcg 159120
to top
>gb|AF058419.1|HSLRPSS45 Homo sapiens lipoprotein receptor-related protein (LRP1), exons 45
            through 55
          Length = 3875

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 282  gcctcctcccaccaccgccg 301
            ||||||||||||||||||||
Sbjct: 3389 gcctcctcccaccaccgccg 3370
to top
>gb|DQ314873.1| Homo sapiens low density lipoprotein-related protein 1
             (alpha-2-macroglobulin receptor) (LRP1) gene, complete cds
          Length = 88248

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 282   gcctcctcccaccaccgccg 301
             ||||||||||||||||||||
Sbjct: 69306 gcctcctcccaccaccgccg 69287
to top
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome
          Length = 3551823

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 383     cgccgtcgtgctcctccacg 402
               ||||||||||||||||||||
Sbjct: 3498554 cgccgtcgtgctcctccacg 3498535
to top
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 103      cgcaaaaaccctagccagct 122
                ||||||||||||||||||||
Sbjct: 10249041 cgcaaaaaccctagccagct 10249060
to top
>gb|AC004277.1|AC004277 Drosophila melanogaster DNA sequence (P1 DS01321 (D143)), complete
             sequence
          Length = 82849

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 235   agccctcctcgccgcgctacttcttctcctcg 266
             |||||| ||||||| ||| |||||||||||||
Sbjct: 15167 agcccttctcgccgtgctccttcttctcctcg 15136


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,353,354
Number of Sequences: 3902068
Number of extensions: 3353354
Number of successful extensions: 80641
Number of sequences better than 10.0: 76
Number of HSP's better than 10.0 without gapping: 80
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 78161
Number of HSP's gapped (non-prelim): 2465
length of query: 466
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 444
effective length of database: 17,147,199,772
effective search space: 7613356698768
effective search space used: 7613356698768
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top