ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast78h09 |
|---|---|
| Clone Library Name | barley_pub |
>IF36_MOUSE (P60229) Eukaryotic translation initiation factor 3 subunit 6| (eIF-3 p48) (eIF3e) (Mammary tumor-associated protein INT-6) (Viral integration site protein INT-6) (MMTV integration site 6) Length = 445 Score = 128 bits (322), Expect = 7e-30 Identities = 63/150 (42%), Positives = 100/150 (66%), Gaps = 2/150 (1%) Frame = +3 Query: 33 MAEHDLTASVAAWMDPHLVLPVLEFLQERGVYADEETLRGKIRLLGGTNMVDYAMDIHKS 212 MAE+DLT +A ++D HLV P+LEFL + +Y ++E L+GK+ LL TNMVD+AMD++K+ Sbjct: 1 MAEYDLTTRIAHFLDRHLVFPLLEFLSVKEIYNEKELLQGKLDLLSDTNMVDFAMDVYKN 60 Query: 213 LHGTDEVPADMVARRSEVVERLRALQEAVAPIVAFLSSPQLVQELHA--DKQYNLHMLQE 386 L+ +D++P + +R+ VV +L+ LQ PIV P+ +++ + D + L + Sbjct: 61 LY-SDDIPHALREKRTTVVAQLKQLQAETEPIVKMFEDPETTRQMQSTRDGRMLFDYLAD 119 Query: 387 RHHIGPDQIEALYQYAKFQYECGMYSDAAD 476 +H + ++ LY+YAKFQYECG YS AA+ Sbjct: 120 KHGFRQEYLDTLYRYAKFQYECGNYSGAAE 149
>IF36_HUMAN (P60228) Eukaryotic translation initiation factor 3 subunit 6| (eIF-3 p48) (eIF3e) (Viral integration site protein INT-6 homolog) Length = 445 Score = 128 bits (322), Expect = 7e-30 Identities = 63/150 (42%), Positives = 100/150 (66%), Gaps = 2/150 (1%) Frame = +3 Query: 33 MAEHDLTASVAAWMDPHLVLPVLEFLQERGVYADEETLRGKIRLLGGTNMVDYAMDIHKS 212 MAE+DLT +A ++D HLV P+LEFL + +Y ++E L+GK+ LL TNMVD+AMD++K+ Sbjct: 1 MAEYDLTTRIAHFLDRHLVFPLLEFLSVKEIYNEKELLQGKLDLLSDTNMVDFAMDVYKN 60 Query: 213 LHGTDEVPADMVARRSEVVERLRALQEAVAPIVAFLSSPQLVQELHA--DKQYNLHMLQE 386 L+ +D++P + +R+ VV +L+ LQ PIV P+ +++ + D + L + Sbjct: 61 LY-SDDIPHALREKRTTVVAQLKQLQAETEPIVKMFEDPETTRQMQSTRDGRMLFDYLAD 119 Query: 387 RHHIGPDQIEALYQYAKFQYECGMYSDAAD 476 +H + ++ LY+YAKFQYECG YS AA+ Sbjct: 120 KHGFRQEYLDTLYRYAKFQYECGNYSGAAE 149
>IF36_SCHPO (O94513) Eukaryotic translation initiation factor 3 subunit 6| (eIF-3 p48) Length = 501 Score = 113 bits (283), Expect = 2e-25 Identities = 62/158 (39%), Positives = 92/158 (58%), Gaps = 3/158 (1%) Frame = +3 Query: 12 IPSPETAMAEHDLTASVAAWMDPHLVLPVLEFLQERGVYADEETLRGKIRLLGGTNMVDY 191 + S ++DL+ + +D HL+ P+LEFL R + +E L+ K LL TNM DY Sbjct: 5 LKSTSPLAVKYDLSQKIMQHLDRHLIFPLLEFLSLRQTHDPKELLQAKYDLLKDTNMTDY 64 Query: 192 AMDIHKSLHG--TDEVPADMVA-RRSEVVERLRALQEAVAPIVAFLSSPQLVQELHADKQ 362 ++ +LHG TDE A+ A +R V++ L L+E V I+ L +P L+ L DK Sbjct: 65 VANLWTNLHGGHTDEDMANAFAEKRRSVLQELSELEEEVQGILGVLENPDLIAALRQDKG 124 Query: 363 YNLHMLQERHHIGPDQIEALYQYAKFQYECGMYSDAAD 476 NL LQE ++I P++I LY++A+FQY CG Y A+D Sbjct: 125 QNLQHLQEHYNITPERIAVLYKFAQFQYNCGNYGGASD 162
>IF36_DROME (O77410) Probable eukaryotic translation initiation factor 3| subunit 6 (eIF-3 p48) (eIF3e) Length = 435 Score = 95.5 bits (236), Expect = 6e-20 Identities = 50/146 (34%), Positives = 85/146 (58%) Frame = +3 Query: 33 MAEHDLTASVAAWMDPHLVLPVLEFLQERGVYADEETLRGKIRLLGGTNMVDYAMDIHKS 212 MA DLT ++D HL P+LEFL + +Y +E L + + TNM+DY MD K Sbjct: 1 MANFDLTRINCQFLDRHLTFPLLEFLCGKEIYNQQELLEYILETVNKTNMIDYTMDTRKR 60 Query: 213 LHGTDEVPADMVARRSEVVERLRALQEAVAPIVAFLSSPQLVQELHADKQYNLHMLQERH 392 L+ + E+P ++V R++EV+ L+ LQ VAPI+ + + + K + ++ LQ+ + Sbjct: 61 LNLSQEMPEELVQRKAEVLATLKQLQNEVAPIMKATDILKNGESMKDSKTF-VNALQKDY 119 Query: 393 HIGPDQIEALYQYAKFQYECGMYSDA 470 + + +E+ Y+ AK+ YECG Y ++ Sbjct: 120 NFKVEHLESAYKLAKYLYECGNYQES 145
>IF36_CAEEL (O61820) Probable eukaryotic translation initiation factor 3| subunit 6 (eIF-3 p48) (eIF3e) Length = 432 Score = 89.0 bits (219), Expect = 6e-18 Identities = 44/152 (28%), Positives = 88/152 (57%), Gaps = 5/152 (3%) Frame = +3 Query: 33 MAEHDLTASVAAWMDPHLVLPVLEFLQERGVYADEETLRGKIRLLGGTNMVDYAMDIHKS 212 M+ DLT +A ++D HL++P+LEF++ RG+Y ++ +LL TNM+D ++ + Sbjct: 1 MSTFDLTQRMAPFLDLHLIIPLLEFIEPRGIYDEKSLTEMHRQLLTKTNMIDSVIETYNG 60 Query: 213 LHGTDEVPADMVARRSEVVERLRALQEAVAPIVAFLSSPQLVQELHADKQYN-----LHM 377 +PA + A++ ++++ L+ V +VA L P++ + + +++ + L Sbjct: 61 ----KPIPAAIEAKKKQIIKERDELKSKVDSVVAILEIPEVKEMMDNNRERDGNVRILEH 116 Query: 378 LQERHHIGPDQIEALYQYAKFQYECGMYSDAA 473 L + H+ D ++ L++Y+KF YECG Y+ A+ Sbjct: 117 LTQNHNFTVDMVDTLFKYSKFMYECGNYTVAS 148
>IF2_CORJK (Q4JV51) Translation initiation factor IF-2| Length = 922 Score = 38.5 bits (88), Expect = 0.009 Identities = 22/46 (47%), Positives = 23/46 (50%) Frame = +2 Query: 14 PLARDSHGGARPDGERGGVDGPPSGPARAGVPPGARGLRRRGNPAG 151 P D+ GG R G R G G P GP G P G RG RRG AG Sbjct: 242 PSKSDNFGGGRGRGGRHGGPGGPGGPGGPGGPRGGRG-GRRGGTAG 286
>CO1A2_HUMAN (P08123) Collagen alpha-2(I) chain precursor| Length = 1366 Score = 36.2 bits (82), Expect = 0.046 Identities = 22/50 (44%), Positives = 24/50 (48%), Gaps = 4/50 (8%) Frame = +2 Query: 14 PLARDSHGGARPDGERG--GVDGP--PSGPARAGVPPGARGLRRRGNPAG 151 P A+ GG P GE G G GP +GPA PPG G R G P G Sbjct: 735 PGAKGERGGKGPKGENGVVGPTGPVGAAGPAGPNGPPGPAGSRGDGGPPG 784
>CO7A1_HUMAN (Q02388) Collagen alpha-1(VII) chain precursor (Long-chain collagen)| (LC collagen) Length = 2944 Score = 35.4 bits (80), Expect = 0.078 Identities = 22/41 (53%), Positives = 24/41 (58%), Gaps = 4/41 (9%) Frame = +2 Query: 35 GGARPDGERG--GVDGPPSGPARAGVP--PGARGLRRRGNP 145 G A GERG G DG P P RAG P PGA GL +G+P Sbjct: 1290 GSATAKGERGFPGADGRPGSPGRAGNPGTPGAPGL--KGSP 1328 Score = 31.2 bits (69), Expect = 1.5 Identities = 21/52 (40%), Positives = 26/52 (50%), Gaps = 11/52 (21%) Frame = +2 Query: 23 RDSHGGARPDGERG--------GVDGP--PSGPARAGVPPGARGLR-RRGNP 145 R G P GERG G+ GP P GP + PPGA GL+ +G+P Sbjct: 2412 RGEMGQPGPSGERGLAGPPGREGIPGPLGPPGPPGSVGPPGASGLKGDKGDP 2463
>IF2_NOCFA (Q5YSC6) Translation initiation factor IF-2| Length = 969 Score = 35.0 bits (79), Expect = 0.10 Identities = 19/45 (42%), Positives = 21/45 (46%), Gaps = 1/45 (2%) Frame = +2 Query: 14 PLARDSHGGARPDGERGGV-DGPPSGPARAGVPPGARGLRRRGNP 145 P AR GG RP +GG GP G R G PG R +G P Sbjct: 194 PAARPGPGGPRPGPAQGGPRPGPGQGAPRPGATPGPRPAAAQGGP 238 Score = 28.9 bits (63), Expect = 7.3 Identities = 16/47 (34%), Positives = 20/47 (42%) Frame = +2 Query: 5 P*HPLARDSHGGARPDGERGGVDGPPSGPARAGVPPGARGLRRRGNP 145 P P R + GG RP ++ P G R G PG + R NP Sbjct: 136 PEAPAQRPTPGGPRPGQQQQRPGAPAQGGPRPGPKPGPKTPRVGNNP 182
>CO3A1_RAT (P13941) Collagen alpha-1(III) chain precursor| Length = 1463 Score = 34.7 bits (78), Expect = 0.13 Identities = 21/49 (42%), Positives = 26/49 (53%), Gaps = 3/49 (6%) Frame = +2 Query: 14 PLARDSHGGARPDGERG--GVDGPPSGPARAGVPPGARGLR-RRGNPAG 151 P A+ G GE G G GPP G AG PPG +G++ RG+P G Sbjct: 820 PGAKGERGAPGEKGEGGPPGAAGPPGGSGPAG-PPGPQGVKGERGSPGG 867 Score = 31.2 bits (69), Expect = 1.5 Identities = 19/40 (47%), Positives = 21/40 (52%), Gaps = 3/40 (7%) Frame = +2 Query: 35 GGARPDGERGGVDGP--PSGPARAGVPPGARGL-RRRGNP 145 GGA P G GG GP P GP PPG +G+ RG P Sbjct: 695 GGAGPPGPEGG-KGPAGPPGPPGTSGPPGLQGMPGERGGP 733 Score = 30.4 bits (67), Expect = 2.5 Identities = 19/46 (41%), Positives = 21/46 (45%), Gaps = 7/46 (15%) Frame = +2 Query: 35 GGARPDGERG-----GVDGPPSGPARAGVP--PGARGLRRRGNPAG 151 GG P G RG G DG P GP G+P PG G + P G Sbjct: 509 GGPGPAGPRGVAGEPGRDGTPGGPGIRGMPGSPGGPGNDGKPGPPG 554 Score = 29.6 bits (65), Expect = 4.3 Identities = 19/34 (55%), Positives = 20/34 (58%), Gaps = 5/34 (14%) Frame = +2 Query: 38 GARP-DGERG--GVDGPPSGPARAGVP--PGARG 124 GAR DG RG G GPP P AG P PGA+G Sbjct: 317 GARGNDGARGSDGQPGPPGPPGTAGFPGSPGAKG 350 Score = 29.3 bits (64), Expect = 5.6 Identities = 20/43 (46%), Positives = 21/43 (48%), Gaps = 6/43 (13%) Frame = +2 Query: 35 GGARPDGERG--GVDGPPSGPARAGVPPGARGL----RRRGNP 145 G A P G +G G G P GP AG PG RGL GNP Sbjct: 848 GPAGPPGPQGVKGERGSPGGPGAAGF-PGGRGLPGPPGNNGNP 889 Score = 29.3 bits (64), Expect = 5.6 Identities = 22/53 (41%), Positives = 22/53 (41%), Gaps = 7/53 (13%) Frame = +2 Query: 14 PLARDSHGGARPDGERG-----GVDGPPSGPARAGVP--PGARGLRRRGNPAG 151 P AR G A G G G DG P P GVP PG RG PAG Sbjct: 442 PGARGERGEAGSPGIPGPKGEDGKDGSPGEPGANGVPGNPGERGAPGFRGPAG 494 Score = 29.3 bits (64), Expect = 5.6 Identities = 15/33 (45%), Positives = 17/33 (51%), Gaps = 2/33 (6%) Frame = +2 Query: 65 GVDGPPSGPARAG--VPPGARGLRRRGNPAGQD 157 G GPP P +AG PPG G PAG+D Sbjct: 197 GYQGPPGEPGQAGPAGPPGPPGAIGPSGPAGKD 229 Score = 28.5 bits (62), Expect = 9.6 Identities = 18/49 (36%), Positives = 24/49 (48%) Frame = +2 Query: 5 P*HPLARDSHGGARPDGERGGVDGPPSGPARAGVPPGARGLRRRGNPAG 151 P HP G + +G+RG + P+GP+ A P GARG P G Sbjct: 1045 PGHPGPPGPVGPSGKNGDRG--ETGPAGPSGAPGPAGARGAPGPQGPRG 1091
>CO3A1_HUMAN (P02461) Collagen alpha-1(III) chain precursor| Length = 1466 Score = 34.7 bits (78), Expect = 0.13 Identities = 18/39 (46%), Positives = 24/39 (61%), Gaps = 1/39 (2%) Frame = +2 Query: 38 GARPDGERGGVDGPPSGPARAGVPPGARGLR-RRGNPAG 151 G + +G GV GPP G AG PPG +G++ RG+P G Sbjct: 831 GEKGEGGPPGVAGPPGGSGPAG-PPGPQGVKGERGSPGG 868 Score = 32.0 bits (71), Expect = 0.87 Identities = 20/46 (43%), Positives = 20/46 (43%), Gaps = 7/46 (15%) Frame = +2 Query: 35 GGARPDGERGG--VDGPPSGPARAGVP-----PGARGLRRRGNPAG 151 GGA P G GG GPP P AG P PG RG P G Sbjct: 696 GGAGPPGPEGGKGAAGPPGPPGAAGTPGLQGMPGERGGLGSPGPKG 741 Score = 30.4 bits (67), Expect = 2.5 Identities = 21/43 (48%), Positives = 22/43 (51%), Gaps = 6/43 (13%) Frame = +2 Query: 35 GGARPDGERG--GVDGPPSGPARAGVPPGARGL----RRRGNP 145 G A P G +G G G P GP AG PGARGL GNP Sbjct: 849 GPAGPPGPQGVKGERGSPGGPGAAGF-PGARGLPGPPGSNGNP 890 Score = 30.0 bits (66), Expect = 3.3 Identities = 19/49 (38%), Positives = 23/49 (46%) Frame = +2 Query: 5 P*HPLARDSHGGARPDGERGGVDGPPSGPARAGVPPGARGLRRRGNPAG 151 P HP G A G+RG + P+GPA A P G+RG P G Sbjct: 1046 PGHPGPPGPVGPAGKSGDRG--ESGPAGPAGAPGPAGSRGAPGPQGPRG 1092 Score = 30.0 bits (66), Expect = 3.3 Identities = 19/47 (40%), Positives = 22/47 (46%), Gaps = 4/47 (8%) Frame = +2 Query: 23 RDSHGGARPDGERG--GVDGPPSGPARAGVP--PGARGLRRRGNPAG 151 R + G A P G G G DG P GP G+P PG G + P G Sbjct: 509 RGAPGPAGPRGAAGEPGRDGVPGGPGMRGMPGSPGGPGSDGKPGPPG 555 Score = 29.6 bits (65), Expect = 4.3 Identities = 19/34 (55%), Positives = 20/34 (58%), Gaps = 5/34 (14%) Frame = +2 Query: 38 GARP-DGERG--GVDGPPSGPARAGVP--PGARG 124 GAR DG RG G GPP P AG P PGA+G Sbjct: 318 GARGNDGARGSDGQPGPPGPPGTAGFPGSPGAKG 351 Score = 29.3 bits (64), Expect = 5.6 Identities = 15/33 (45%), Positives = 17/33 (51%), Gaps = 2/33 (6%) Frame = +2 Query: 65 GVDGPPSGPARAG--VPPGARGLRRRGNPAGQD 157 G GPP P +AG PPG G PAG+D Sbjct: 198 GYQGPPGEPGQAGPSGPPGPPGAIGPSGPAGKD 230
>CO3A1_BOVIN (P04258) Collagen alpha-1(III) chain| Length = 1049 Score = 33.5 bits (75), Expect = 0.30 Identities = 20/42 (47%), Positives = 22/42 (52%), Gaps = 3/42 (7%) Frame = +2 Query: 35 GGARPDGERGG--VDGPPSGPARAGVPPGARGL-RRRGNPAG 151 GGA P G GG GPP P AG PG +G+ RG P G Sbjct: 540 GGAGPPGPEGGKGAAGPPGPPGSAGT-PGLQGMPGERGGPGG 580 Score = 31.6 bits (70), Expect = 1.1 Identities = 18/46 (39%), Positives = 21/46 (45%), Gaps = 4/46 (8%) Frame = +2 Query: 29 SHGGARPDGERG--GVDGPPSGPARAGVP--PGARGLRRRGNPAGQ 154 S+G P G G G DGPP P G P PG G + P G+ Sbjct: 730 SNGNPGPPGSSGAPGKDGPPGPPGSNGAPGSPGISGPKGDSGPPGE 775 Score = 31.6 bits (70), Expect = 1.1 Identities = 20/49 (40%), Positives = 25/49 (51%), Gaps = 3/49 (6%) Frame = +2 Query: 14 PLARDSHGGARPDGERG--GVDGPPSGPARAGVPPGARGLR-RRGNPAG 151 P A+ G GE G G GP G AG PPG +G++ RG+P G Sbjct: 665 PGAKGERGAPGEKGEGGPPGAAGPAGGSGPAG-PPGPQGVKGERGSPGG 712 Score = 30.0 bits (66), Expect = 3.3 Identities = 18/46 (39%), Positives = 21/46 (45%), Gaps = 7/46 (15%) Frame = +2 Query: 35 GGARPDGERG-----GVDGPPSGPARAGVP--PGARGLRRRGNPAG 151 GG P G RG G +G P GP G+P PG G + P G Sbjct: 354 GGPGPAGPRGVAGEPGRNGLPGGPGLRGIPGSPGGPGSNGKPGPPG 399 Score = 29.6 bits (65), Expect = 4.3 Identities = 19/34 (55%), Positives = 20/34 (58%), Gaps = 5/34 (14%) Frame = +2 Query: 38 GARP-DGERG--GVDGPPSGPARAGVP--PGARG 124 GAR DG RG G GPP P AG P PGA+G Sbjct: 162 GARGNDGARGSDGQPGPPGPPGTAGFPGSPGAKG 195 Score = 28.9 bits (63), Expect = 7.3 Identities = 17/41 (41%), Positives = 19/41 (46%), Gaps = 2/41 (4%) Frame = +2 Query: 35 GGARPDGERG--GVDGPPSGPARAGVPPGARGLRRRGNPAG 151 G + GERG G GPP GP PPG G + P G Sbjct: 519 GDSGAPGERGPPGAGGPP-GPRGGAGPPGPEGGKGAAGPPG 558 Score = 28.9 bits (63), Expect = 7.3 Identities = 17/47 (36%), Positives = 22/47 (46%), Gaps = 1/47 (2%) Frame = +2 Query: 14 PLARDSHGGARPDGERGGVDGP-PSGPARAGVPPGARGLRRRGNPAG 151 P + + G +GERGG GP P GPA G +G P+G Sbjct: 425 PGPKGNDGAPGKNGERGGPGGPGPQGPAGKNGETGPQGPPGPTGPSG 471
>CAFF_RIFPA (P30754) Fibril-forming collagen alpha chain (Fragment)| Length = 1027 Score = 32.7 bits (73), Expect = 0.51 Identities = 20/42 (47%), Positives = 21/42 (50%), Gaps = 2/42 (4%) Frame = +2 Query: 5 P*HPLARDSHGGARPDGERGGVDGPP--SGPARAGVPPGARG 124 P P A G A DGE G GPP +GP A PPG RG Sbjct: 429 PGEPGAHGEQGDAGKDGETGAA-GPPGAAGPTGARGPPGPRG 469 Score = 30.0 bits (66), Expect = 3.3 Identities = 20/45 (44%), Positives = 22/45 (48%), Gaps = 1/45 (2%) Frame = +2 Query: 20 ARDSHGGARPDGERGGVDGP-PSGPARAGVPPGARGLRRRGNPAG 151 A+ + G A GERG V PSGPA G GA G R P G Sbjct: 479 AQGTPGEAGKTGERGAVGATGPSGPAGPGGERGAPGDRGNVGPRG 523
>IF2_STRAW (Q82K53) Translation initiation factor IF-2| Length = 1046 Score = 32.3 bits (72), Expect = 0.66 Identities = 19/49 (38%), Positives = 19/49 (38%) Frame = +2 Query: 5 P*HPLARDSHGGARPDGERGGVDGPPSGPARAGVPPGARGLRRRGNPAG 151 P P A GG P G G G P GP G PG G G P G Sbjct: 311 PQRPAAGPRPGGGGPGGRGPGGGGRPGGPGGGGGRPGGGGF--AGRPGG 357 Score = 31.2 bits (69), Expect = 1.5 Identities = 21/48 (43%), Positives = 21/48 (43%), Gaps = 2/48 (4%) Frame = +2 Query: 14 PLARDSHGGARPDGERGGVDGPPSGPARAGVPPGARG--LRRRGNPAG 151 P R GG RP G GG G P G AG P G G R G P G Sbjct: 325 PGGRGPGGGGRPGGPGGG-GGRPGGGGFAGRPGGGGGGFAGRPGGPGG 371
>FBRL_CANGA (Q6FN88) Fibrillarin| Length = 323 Score = 32.3 bits (72), Expect = 0.66 Identities = 20/42 (47%), Positives = 22/42 (52%), Gaps = 1/42 (2%) Frame = +2 Query: 29 SHGGARPD-GERGGVDGPPSGPARAGVPPGARGLRRRGNPAG 151 S GG+R G RGG G P G +R G GARG R G G Sbjct: 38 SRGGSRGGFGGRGGSRGGPRGGSRGGPRGGARGGARGGAKGG 79
>COEA1_MOUSE (Q80X19) Collagen alpha-1(XIV) chain precursor| Length = 1797 Score = 32.0 bits (71), Expect = 0.87 Identities = 20/45 (44%), Positives = 22/45 (48%), Gaps = 1/45 (2%) Frame = +2 Query: 23 RDSHGGARPDGE-RGGVDGPPSGPARAGVPPGARGLRRRGNPAGQ 154 R G A P GE R G GPP P G PPG G+ P+GQ Sbjct: 1713 RGPPGPAGPSGESRPGSPGPPGSPGPRG-PPGHLGVPGPQGPSGQ 1756 Score = 28.9 bits (63), Expect = 7.3 Identities = 16/45 (35%), Positives = 19/45 (42%), Gaps = 2/45 (4%) Frame = +2 Query: 23 RDSHGGARPDGERGGVDGPPSGPARAGVP--PGARGLRRRGNPAG 151 RD G R + G GPP P G+P PG G+ P G Sbjct: 1547 RDGSPGQRGFPGKDGSSGPPGPPGPIGIPGAPGVPGITGSMGPQG 1591
>CO1A2_CANFA (O46392) Collagen alpha-2(I) chain precursor| Length = 1366 Score = 32.0 bits (71), Expect = 0.87 Identities = 20/50 (40%), Positives = 23/50 (46%), Gaps = 4/50 (8%) Frame = +2 Query: 14 PLARDSHGGARPDGERG--GVDGP--PSGPARAGVPPGARGLRRRGNPAG 151 P A+ G P GE G G GP +GP+ PPG G R G P G Sbjct: 735 PGAKGERGTKGPKGENGPVGPTGPIGSAGPSGPNGPPGPAGSRGDGGPPG 784 Score = 29.6 bits (65), Expect = 4.3 Identities = 17/39 (43%), Positives = 19/39 (48%) Frame = +2 Query: 35 GGARPDGERGGVDGPPSGPARAGVPPGARGLRRRGNPAG 151 G P+GE G PSGP PG+RGL PAG Sbjct: 379 GKRGPNGEAGSAG--PSGPPGLRGSPGSRGLPGADGPAG 415 Score = 28.5 bits (62), Expect = 9.6 Identities = 18/39 (46%), Positives = 22/39 (56%), Gaps = 4/39 (10%) Frame = +2 Query: 53 GERG--GVDGPP--SGPARAGVPPGARGLRRRGNPAGQD 157 GERG G GP +GPA A PGA+G R P G++ Sbjct: 712 GERGEVGPAGPNGFAGPAGAAGQPGAKGERGTKGPKGEN 750 Score = 28.5 bits (62), Expect = 9.6 Identities = 18/46 (39%), Positives = 22/46 (47%) Frame = +2 Query: 14 PLARDSHGGARPDGERGGVDGPPSGPARAGVPPGARGLRRRGNPAG 151 P A + G A G+RG + P+GPA P G G R PAG Sbjct: 678 PGAMGAPGPAGATGDRG--EAGPAGPAGPAGPRGTPGERGEVGPAG 721
>COEA1_HUMAN (Q05707) Collagen alpha-1(XIV) chain precursor (Undulin)| Length = 1796 Score = 32.0 bits (71), Expect = 0.87 Identities = 20/45 (44%), Positives = 22/45 (48%), Gaps = 1/45 (2%) Frame = +2 Query: 23 RDSHGGARPDGE-RGGVDGPPSGPARAGVPPGARGLRRRGNPAGQ 154 R G A P GE R G GPP P G PPG G+ P+GQ Sbjct: 1712 RGPPGPAGPSGESRPGSPGPPGSPGPRG-PPGHLGVPGPQGPSGQ 1755 Score = 28.5 bits (62), Expect = 9.6 Identities = 16/45 (35%), Positives = 19/45 (42%), Gaps = 2/45 (4%) Frame = +2 Query: 23 RDSHGGARPDGERGGVDGPPSGPARAGVP--PGARGLRRRGNPAG 151 RD G R + G GPP P G+P PG G+ P G Sbjct: 1546 RDGSPGQRGLPGKDGSSGPPGPPGPIGIPGTPGVPGITGSMGPQG 1590
>MYSC_ACACA (P10569) Myosin IC heavy chain| Length = 1168 Score = 32.0 bits (71), Expect = 0.87 Identities = 20/39 (51%), Positives = 21/39 (53%), Gaps = 1/39 (2%) Frame = +2 Query: 35 GGARPDGE-RGGVDGPPSGPARAGVPPGARGLRRRGNPA 148 GG P G RGG PP G RAG PPG RG+ G A Sbjct: 1072 GGPAPGGPGRGGA--PPPGAGRAG-PPGGRGMPAPGGAA 1107 Score = 31.6 bits (70), Expect = 1.1 Identities = 18/40 (45%), Positives = 19/40 (47%), Gaps = 3/40 (7%) Frame = +2 Query: 35 GGARPDGERG---GVDGPPSGPARAGVPPGARGLRRRGNP 145 GGA P G G GPP G PPG G+R RG P Sbjct: 1104 GGAAPRGRGAPPPGAGGPPGGGRGGAPPPG--GMRGRGGP 1141 Score = 30.4 bits (67), Expect = 2.5 Identities = 18/40 (45%), Positives = 19/40 (47%) Frame = +2 Query: 35 GGARPDGERGGVDGPPSGPARAGVPPGARGLRRRGNPAGQ 154 GG P RGG P GP R G PP G R G P G+ Sbjct: 1063 GGPGPMRGRGGP--APGGPGRGGAPPPGAG--RAGPPGGR 1098
>CO1A2_BOVIN (P02465) Collagen alpha-2(I) chain precursor| Length = 1364 Score = 32.0 bits (71), Expect = 0.87 Identities = 20/50 (40%), Positives = 23/50 (46%), Gaps = 4/50 (8%) Frame = +2 Query: 14 PLARDSHGGARPDGERG--GVDGP--PSGPARAGVPPGARGLRRRGNPAG 151 P A+ G P GE G G GP +GP+ PPG G R G P G Sbjct: 733 PGAKGERGTKGPKGENGPVGPTGPVGAAGPSGPNGPPGPAGSRGDGGPPG 782 Score = 28.9 bits (63), Expect = 7.3 Identities = 18/46 (39%), Positives = 24/46 (52%) Frame = +2 Query: 14 PLARDSHGGARPDGERGGVDGPPSGPARAGVPPGARGLRRRGNPAG 151 P A + G A +G+RG + P+GPA P G+ G R PAG Sbjct: 676 PGAIGAPGPAGANGDRG--EAGPAGPAGPAGPRGSPGERGEVGPAG 719 Score = 28.5 bits (62), Expect = 9.6 Identities = 18/39 (46%), Positives = 22/39 (56%), Gaps = 4/39 (10%) Frame = +2 Query: 53 GERG--GVDGPP--SGPARAGVPPGARGLRRRGNPAGQD 157 GERG G GP +GPA A PGA+G R P G++ Sbjct: 710 GERGEVGPAGPNGFAGPAGAAGQPGAKGERGTKGPKGEN 748
>CO1A2_RAT (P02466) Collagen alpha-2(I) chain precursor| Length = 1372 Score = 31.6 bits (70), Expect = 1.1 Identities = 20/50 (40%), Positives = 23/50 (46%), Gaps = 4/50 (8%) Frame = +2 Query: 14 PLARDSHGGARPDGERG--GVDGP--PSGPARAGVPPGARGLRRRGNPAG 151 P A+ G P GE G G GP +GP+ PPG G R G P G Sbjct: 741 PGAKGEKGTKGPKGENGIVGPTGPVGAAGPSGPNGPPGPAGSRGDGGPPG 790 Score = 30.4 bits (67), Expect = 2.5 Identities = 19/36 (52%), Positives = 19/36 (52%), Gaps = 2/36 (5%) Frame = +2 Query: 23 RDSHGGARPDGERGGVDGP--PSGPARAGVPPGARG 124 R G A P G R GVDGP P GP A PPG G Sbjct: 41 RGQRGPAGPRG-RDGVDGPVGPPGPPGAPGPPGPPG 75
>CO9A3_CHICK (P32017) Collagen alpha-3(IX) chain precursor| Length = 675 Score = 31.6 bits (70), Expect = 1.1 Identities = 19/47 (40%), Positives = 24/47 (51%), Gaps = 1/47 (2%) Frame = +2 Query: 14 PLARDSHGGARPDGERG-GVDGPPSGPARAGVPPGARGLRRRGNPAG 151 P R + G A P G G G+ GPP P +G+ PG G R P+G Sbjct: 96 PGDRGALGPAGPPGPAGKGLPGPPGPPGPSGL-PGGNGFRGPPGPSG 141
>Y2228_XYLFA (Q9PBB6) UPF0301 protein Xf2228| Length = 188 Score = 31.6 bits (70), Expect = 1.1 Identities = 22/76 (28%), Positives = 34/76 (44%), Gaps = 5/76 (6%) Frame = +3 Query: 6 PSIPSPETA-----MAEHDLTASVAAWMDPHLVLPVLEFLQERGVYADEETLRGKIRLLG 170 PS+P P A + +HD S+ ++ + E L + G+ ETLR ++ L G Sbjct: 17 PSMPDPHFARGVALICQHDSNGSMGVVLNRPSEYTLGEVLFQMGIETASETLREQVVLAG 76 Query: 171 GTNMVDYAMDIHKSLH 218 G D I+ S H Sbjct: 77 GPVHPDRGFVIYDSEH 92
>ROA1_CAEEL (Q22037) Heterogeneous nuclear ribonucleoprotein A1| Length = 346 Score = 31.2 bits (69), Expect = 1.5 Identities = 16/43 (37%), Positives = 20/43 (46%) Frame = +2 Query: 23 RDSHGGARPDGERGGVDGPPSGPARAGVPPGARGLRRRGNPAG 151 R++ GG DG+RGG +G G G P G G P G Sbjct: 204 RETRGGRSRDGQRGGYNGGGGGGGGWGGPAQRGGPGAYGGPGG 246
>SYB_LOLPE (P47194) Synaptobrevin| Length = 125 Score = 31.2 bits (69), Expect = 1.5 Identities = 12/23 (52%), Positives = 14/23 (60%) Frame = +2 Query: 47 PDGERGGVDGPPSGPARAGVPPG 115 P + G GPPSGP + G PPG Sbjct: 4 PQNPQAGPGGPPSGPPQPGGPPG 26
>CSP_PLASI (Q03110) Circumsporozoite protein precursor (CS)| Length = 386 Score = 31.2 bits (69), Expect = 1.5 Identities = 20/46 (43%), Positives = 22/46 (47%), Gaps = 8/46 (17%) Frame = +2 Query: 38 GARPDGERGG--VDGPPSGPARAGVPPGAR------GLRRRGNPAG 151 G R DG+ G DG P+G AG P G R G R G PAG Sbjct: 195 GDRADGQPAGDRADGQPAGDRAAGQPAGDRAAGQPAGDRAAGQPAG 240 Score = 30.8 bits (68), Expect = 1.9 Identities = 20/46 (43%), Positives = 22/46 (47%), Gaps = 8/46 (17%) Frame = +2 Query: 38 GARPDGERGG--VDGPPSGPARAGVPPGAR------GLRRRGNPAG 151 G R DG+ G DG P+G AG P G R G R G PAG Sbjct: 150 GDRADGQPAGDRADGQPAGDRAAGQPAGDRAAGQPAGDRADGQPAG 195 Score = 30.8 bits (68), Expect = 1.9 Identities = 20/46 (43%), Positives = 22/46 (47%), Gaps = 8/46 (17%) Frame = +2 Query: 38 GARPDGERGG--VDGPPSGPARAGVPPGAR------GLRRRGNPAG 151 G R DG+ G DG P+G AG P G R G R G PAG Sbjct: 123 GDRADGQPAGDRADGQPAGDRAAGQPAGDRADGQPAGDRADGQPAG 168
>CO5A1_RAT (Q9JI03) Collagen alpha-1(V) chain precursor| Length = 1840 Score = 30.8 bits (68), Expect = 1.9 Identities = 17/43 (39%), Positives = 21/43 (48%), Gaps = 4/43 (9%) Frame = +2 Query: 35 GGARPDGERG--GVDGP--PSGPARAGVPPGARGLRRRGNPAG 151 G + P GE+G G GP P GP PPG +G + P G Sbjct: 1512 GSSGPKGEQGITGPSGPLGPPGPPGLPGPPGPKGAKGSSGPTG 1554 Score = 30.8 bits (68), Expect = 1.9 Identities = 18/50 (36%), Positives = 22/50 (44%), Gaps = 11/50 (22%) Frame = +2 Query: 35 GGARPDGERG-----------GVDGPPSGPARAGVPPGARGLRRRGNPAG 151 G P GE+G G DGPP P + G PPG +G + P G Sbjct: 738 GAIGPPGEKGPLGKPGLPGMPGADGPPGHPGKEG-PPGEKGGQGPPGPQG 786 Score = 30.0 bits (66), Expect = 3.3 Identities = 21/60 (35%), Positives = 26/60 (43%), Gaps = 13/60 (21%) Frame = +2 Query: 14 PLARDSHGGARPDGERG--------GVDGPPS-----GPARAGVPPGARGLRRRGNPAGQ 154 P R G A P+G +G G++GPP GP A PG GLR P G+ Sbjct: 1391 PGKRGPPGPAGPEGRQGEKGAKGEAGLEGPPGKTGPIGPQGAPGKPGPDGLRGIPGPVGE 1450 Score = 29.3 bits (64), Expect = 5.6 Identities = 18/43 (41%), Positives = 20/43 (46%), Gaps = 13/43 (30%) Frame = +2 Query: 35 GGARPDGERG-----------GVDGPPSGPARAGVP--PGARG 124 G A P GERG G GPP P + G+P PG RG Sbjct: 942 GPAGPPGERGPNGPQGPTGFPGPKGPPGPPGKDGLPGHPGQRG 984
>CO5A1_CRILO (Q60467) Collagen alpha-1(V) chain precursor| Length = 1840 Score = 30.8 bits (68), Expect = 1.9 Identities = 17/43 (39%), Positives = 21/43 (48%), Gaps = 4/43 (9%) Frame = +2 Query: 35 GGARPDGERG--GVDGP--PSGPARAGVPPGARGLRRRGNPAG 151 G + P GE+G G GP P GP PPG +G + P G Sbjct: 1512 GSSGPKGEQGITGPSGPLGPPGPPGLPGPPGPKGAKGSSGPTG 1554 Score = 30.8 bits (68), Expect = 1.9 Identities = 18/50 (36%), Positives = 22/50 (44%), Gaps = 11/50 (22%) Frame = +2 Query: 35 GGARPDGERG-----------GVDGPPSGPARAGVPPGARGLRRRGNPAG 151 G P GE+G G DGPP P + G PPG +G + P G Sbjct: 738 GAIGPPGEKGPLGKPGLPGMPGADGPPGHPGKEG-PPGEKGGQGPPGPQG 786 Score = 30.0 bits (66), Expect = 3.3 Identities = 21/60 (35%), Positives = 26/60 (43%), Gaps = 13/60 (21%) Frame = +2 Query: 14 PLARDSHGGARPDGERG--------GVDGPPS-----GPARAGVPPGARGLRRRGNPAGQ 154 P R G A P+G +G G++GPP GP A PG GLR P G+ Sbjct: 1391 PGKRGPPGPAGPEGRQGEKGAKGEAGLEGPPGKTGPIGPQGAPGKPGPDGLRGIPGPVGE 1450 Score = 29.3 bits (64), Expect = 5.6 Identities = 18/43 (41%), Positives = 20/43 (46%), Gaps = 13/43 (30%) Frame = +2 Query: 35 GGARPDGERG-----------GVDGPPSGPARAGVP--PGARG 124 G A P GERG G GPP P + G+P PG RG Sbjct: 942 GPAGPPGERGPNGPQGPTGFPGPKGPPGPPGKDGLPGHPGQRG 984
>CSP_PLAVS (P13826) Circumsporozoite protein (CS) (Fragment)| Length = 343 Score = 30.8 bits (68), Expect = 1.9 Identities = 20/46 (43%), Positives = 22/46 (47%), Gaps = 8/46 (17%) Frame = +2 Query: 38 GARPDGERGG--VDGPPSGPARAGVPPGAR------GLRRRGNPAG 151 G R DG+ G DG P+G AG P G R G R G PAG Sbjct: 125 GDRADGQPAGDRADGQPAGDRAAGQPAGDRAAGQPAGDRADGQPAG 170 Score = 30.8 bits (68), Expect = 1.9 Identities = 20/46 (43%), Positives = 22/46 (47%), Gaps = 8/46 (17%) Frame = +2 Query: 38 GARPDGERGG--VDGPPSGPARAGVPPGAR------GLRRRGNPAG 151 G R DG+ G DG P+G AG P G R G R G PAG Sbjct: 80 GDRADGQPAGDRADGQPAGDRAAGQPAGDRADGQPAGDRADGQPAG 125 Score = 28.5 bits (62), Expect = 9.6 Identities = 18/42 (42%), Positives = 21/42 (50%), Gaps = 6/42 (14%) Frame = +2 Query: 44 RPDGERGGVDGPPSGPARAGVPPGAR------GLRRRGNPAG 151 +P G+R DG P+G AG P G R G R G PAG Sbjct: 176 QPAGDRA--DGQPAGDRAAGQPAGDRADGQPAGDRAAGQPAG 215 Score = 28.5 bits (62), Expect = 9.6 Identities = 18/42 (42%), Positives = 21/42 (50%), Gaps = 6/42 (14%) Frame = +2 Query: 44 RPDGERGGVDGPPSGPARAGVPPGAR------GLRRRGNPAG 151 +P G+R DG P+G AG P G R G R G PAG Sbjct: 158 QPAGDRA--DGQPAGDRAAGQPAGDRADGQPAGDRAAGQPAG 197
>COBA1_RAT (P20909) Collagen alpha-1(XI) chain precursor (Fragment)| Length = 482 Score = 30.8 bits (68), Expect = 1.9 Identities = 20/54 (37%), Positives = 23/54 (42%), Gaps = 7/54 (12%) Frame = +2 Query: 14 PLARDSHGGARPDGERG--GVDGPPS-----GPARAGVPPGARGLRRRGNPAGQ 154 P A S GG G +G G +GPP GP PG GLR P G+ Sbjct: 41 PGASGSEGGQGEKGAKGEAGAEGPPGKTGPVGPQGPSGKPGPEGLRGIPGPVGE 94 Score = 28.5 bits (62), Expect = 9.6 Identities = 17/44 (38%), Positives = 22/44 (50%) Frame = +2 Query: 14 PLARDSHGGARPDGERGGVDGPPSGPARAGVPPGARGLRRRGNP 145 P +D GG + + G GPP GP+ PPG G +RG P Sbjct: 1 PAGQDGVGGDKGEDGDPGQPGPP-GPSGEAGPPGPPG--KRGPP 41
>CO3A1_CHICK (P12105) Collagen alpha-1(III) chain precursor (Fragments)| Length = 1262 Score = 30.8 bits (68), Expect = 1.9 Identities = 19/45 (42%), Positives = 23/45 (51%), Gaps = 6/45 (13%) Frame = +2 Query: 35 GGARPDGERG-----GVDGPPSGPARAGVPPGARGLR-RRGNPAG 151 G P G RG G GP GP G PPG +G++ RG+P G Sbjct: 824 GERGPPGLRGEAGPPGAAGPQGGPGAPG-PPGPQGVKGERGSPGG 867 Score = 30.8 bits (68), Expect = 1.9 Identities = 18/48 (37%), Positives = 20/48 (41%), Gaps = 7/48 (14%) Frame = +2 Query: 29 SHGGARPDGERG--GVDGPPSGPARAGVP-----PGARGLRRRGNPAG 151 + GG P G G G GPP P G+P PG RG P G Sbjct: 693 ARGGPGPAGSEGAKGPPGPPGAPGGTGLPGLQGMPGERGASGSPGPKG 740 Score = 29.6 bits (65), Expect = 4.3 Identities = 19/46 (41%), Positives = 19/46 (41%), Gaps = 7/46 (15%) Frame = +2 Query: 35 GGARPDGERG--GVDGPPSGPARAGVP-----PGARGLRRRGNPAG 151 G G RG G GPP R G P PG RG R PAG Sbjct: 932 GSPGASGARGPPGPAGPPGKDGRGGYPGPIGPPGPRGNRGESGPAG 977 Score = 29.3 bits (64), Expect = 5.6 Identities = 20/49 (40%), Positives = 22/49 (44%) Frame = +2 Query: 5 P*HPLARDSHGGARPDGERGGVDGPPSGPARAGVPPGARGLRRRGNPAG 151 P HP ++G GERG P GP A PGA G R PAG Sbjct: 901 PGHPGPAGNNGAPGKAGERGFQG--PLGPQGAIGSPGASGARGPPGPAG 947
>IGEB_MOUSE (P03975) IgE-binding protein| Length = 557 Score = 30.8 bits (68), Expect = 1.9 Identities = 17/49 (34%), Positives = 24/49 (48%) Frame = +3 Query: 207 KSLHGTDEVPADMVARRSEVVERLRALQEAVAPIVAFLSSPQLVQELHA 353 K + G E +D VAR +E ER+ E AP++ L Q +E A Sbjct: 363 KIIQGPQESFSDFVARMTEAAERIFGESEQAAPLIEQLIYEQATKECRA 411
>GRASP_RAT (Q8R4T5) General receptor for phosphoinositides 1-associated| scaffold protein (GRP1-associated scaffold protein) (Tamalin) (95 kDa postsynaptic density protein discs-large ZO-1 domain-containing protein) (PSD-95 PDZ domain-containing protein) Length = 394 Score = 30.8 bits (68), Expect = 1.9 Identities = 14/29 (48%), Positives = 14/29 (48%) Frame = +2 Query: 38 GARPDGERGGVDGPPSGPARAGVPPGARG 124 G PD E PSGP A PPGA G Sbjct: 23 GRAPDSEAARAAPTPSGPPAAAAPPGAPG 51
>CRSP2_HUMAN (O60244) CRSP complex subunit 2 (Cofactor required for Sp1| transcriptional activation subunit 2) (Transcriptional coactivator CRSP150) (Vitamin D3 receptor-interacting protein complex 150 kDa component) (DRIP150) (Thyroid hormone receptor-ass Length = 1454 Score = 30.8 bits (68), Expect = 1.9 Identities = 16/35 (45%), Positives = 19/35 (54%) Frame = +2 Query: 14 PLARDSHGGARPDGERGGVDGPPSGPARAGVPPGA 118 P+ ++H P G GG GPPS PA PPGA Sbjct: 3 PVQLENHQLVPPGGGGGGSGGPPSAPAPP--PPGA 35
>CO5A1_MOUSE (O88207) Collagen alpha-1(V) chain precursor| Length = 1838 Score = 30.8 bits (68), Expect = 1.9 Identities = 18/50 (36%), Positives = 22/50 (44%), Gaps = 11/50 (22%) Frame = +2 Query: 35 GGARPDGERG-----------GVDGPPSGPARAGVPPGARGLRRRGNPAG 151 G P GE+G G DGPP P + G PPG +G + P G Sbjct: 736 GAIGPPGEKGPLGKPGLPGMPGADGPPGHPGKEG-PPGEKGGQGPPGPQG 784 Score = 30.0 bits (66), Expect = 3.3 Identities = 21/60 (35%), Positives = 26/60 (43%), Gaps = 13/60 (21%) Frame = +2 Query: 14 PLARDSHGGARPDGERG--------GVDGPPS-----GPARAGVPPGARGLRRRGNPAGQ 154 P R G A P+G +G G++GPP GP A PG GLR P G+ Sbjct: 1389 PGKRGPPGPAGPEGRQGEKGAKGEAGLEGPPGKTGPIGPQGAPGKPGPDGLRGIPGPVGE 1448 Score = 29.6 bits (65), Expect = 4.3 Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 4/43 (9%) Frame = +2 Query: 35 GGARPDGERG--GVDGP--PSGPARAGVPPGARGLRRRGNPAG 151 G + P G++G G GP P GP PPG +G + P G Sbjct: 1510 GSSGPKGDQGITGPSGPLGPPGPPGLPGPPGPKGAKGSSGPTG 1552 Score = 29.3 bits (64), Expect = 5.6 Identities = 18/43 (41%), Positives = 20/43 (46%), Gaps = 13/43 (30%) Frame = +2 Query: 35 GGARPDGERG-----------GVDGPPSGPARAGVP--PGARG 124 G A P GERG G GPP P + G+P PG RG Sbjct: 940 GPAGPPGERGPNGPQGPTGFPGPKGPPGPPGKDGLPGHPGQRG 982
>CO5A1_HUMAN (P20908) Collagen alpha-1(V) chain precursor| Length = 1838 Score = 30.8 bits (68), Expect = 1.9 Identities = 17/44 (38%), Positives = 21/44 (47%), Gaps = 5/44 (11%) Frame = +2 Query: 35 GGARPDGERG-----GVDGPPSGPARAGVPPGARGLRRRGNPAG 151 G + P GE+G G GPP P G PPG +G + P G Sbjct: 1510 GSSGPKGEQGITGPSGPIGPPGPPGLPG-PPGPKGAKGSSGPTG 1552 Score = 30.8 bits (68), Expect = 1.9 Identities = 18/50 (36%), Positives = 22/50 (44%), Gaps = 11/50 (22%) Frame = +2 Query: 35 GGARPDGERG-----------GVDGPPSGPARAGVPPGARGLRRRGNPAG 151 G P GE+G G DGPP P + G PPG +G + P G Sbjct: 736 GAIGPPGEKGPLGKPGLPGMPGADGPPGHPGKEG-PPGEKGGQGPPGPQG 784 Score = 30.0 bits (66), Expect = 3.3 Identities = 21/60 (35%), Positives = 26/60 (43%), Gaps = 13/60 (21%) Frame = +2 Query: 14 PLARDSHGGARPDGERG--------GVDGPPS-----GPARAGVPPGARGLRRRGNPAGQ 154 P R G A P+G +G G++GPP GP A PG GLR P G+ Sbjct: 1389 PGKRGPPGPAGPEGRQGEKGAKGEAGLEGPPGKTGPIGPQGAPGKPGPDGLRGIPGPVGE 1448 Score = 29.3 bits (64), Expect = 5.6 Identities = 18/43 (41%), Positives = 20/43 (46%), Gaps = 13/43 (30%) Frame = +2 Query: 35 GGARPDGERG-----------GVDGPPSGPARAGVP--PGARG 124 G A P GERG G GPP P + G+P PG RG Sbjct: 940 GPAGPPGERGPNGPQGPTGFPGPKGPPGPPGKDGLPGHPGQRG 982
>CSP_PLAVB (P08677) Circumsporozoite protein precursor (CS)| Length = 378 Score = 30.8 bits (68), Expect = 1.9 Identities = 20/46 (43%), Positives = 22/46 (47%), Gaps = 8/46 (17%) Frame = +2 Query: 38 GARPDGERGG--VDGPPSGPARAGVPPGAR------GLRRRGNPAG 151 G R DG+ G DG P+G AG P G R G R G PAG Sbjct: 150 GDRADGQPAGDRADGQPAGDRAAGQPAGDRAAGQPAGDRADGQPAG 195 Score = 30.8 bits (68), Expect = 1.9 Identities = 20/46 (43%), Positives = 22/46 (47%), Gaps = 8/46 (17%) Frame = +2 Query: 38 GARPDGERGG--VDGPPSGPARAGVPPGAR------GLRRRGNPAG 151 G R DG+ G DG P+G AG P G R G R G PAG Sbjct: 105 GDRADGQPAGDRADGQPAGDRAAGQPAGDRADGQPAGDRADGQPAG 150 Score = 28.5 bits (62), Expect = 9.6 Identities = 18/42 (42%), Positives = 21/42 (50%), Gaps = 6/42 (14%) Frame = +2 Query: 44 RPDGERGGVDGPPSGPARAGVPPGAR------GLRRRGNPAG 151 +P G+R DG P+G AG P G R G R G PAG Sbjct: 219 QPAGDRA--DGQPAGDRAAGQPAGDRAAGQPAGDRAAGQPAG 258 Score = 28.5 bits (62), Expect = 9.6 Identities = 18/42 (42%), Positives = 21/42 (50%), Gaps = 6/42 (14%) Frame = +2 Query: 44 RPDGERGGVDGPPSGPARAGVPPGAR------GLRRRGNPAG 151 +P G+R DG P+G AG P G R G R G PAG Sbjct: 201 QPAGDRA--DGQPAGDRAAGQPAGDRADGQPAGDRAAGQPAG 240 Score = 28.5 bits (62), Expect = 9.6 Identities = 18/42 (42%), Positives = 21/42 (50%), Gaps = 6/42 (14%) Frame = +2 Query: 44 RPDGERGGVDGPPSGPARAGVPPGAR------GLRRRGNPAG 151 +P G+R DG P+G AG P G R G R G PAG Sbjct: 183 QPAGDRA--DGQPAGDRAAGQPAGDRADGQPAGDRAAGQPAG 222
>CO1A1_CHICK (P02457) Collagen alpha-1(I) chain precursor| Length = 1453 Score = 30.8 bits (68), Expect = 1.9 Identities = 19/46 (41%), Positives = 20/46 (43%), Gaps = 7/46 (15%) Frame = +2 Query: 35 GGARPDGERG--GVDGPPSGPARAGV-----PPGARGLRRRGNPAG 151 G A P G+RG G GPP P G P G G R PAG Sbjct: 1017 GAAGPKGDRGETGPAGPPGAPGAPGAPGPVGPAGKNGDRGETGPAG 1062
>CO9A3_HUMAN (Q14050) Collagen alpha-3(IX) chain precursor| Length = 684 Score = 30.4 bits (67), Expect = 2.5 Identities = 21/47 (44%), Positives = 23/47 (48%), Gaps = 1/47 (2%) Frame = +2 Query: 14 PLARDSHGGARPDGERG-GVDGPPSGPARAGVPPGARGLRRRGNPAG 151 P R S G P G G G+ GPP G A PPG GLR P+G Sbjct: 100 PGERGSLGPPGPPGLGGKGLPGPP-GEAGVSGPPGGIGLRGPPGPSG 145
>COBA1_HUMAN (P12107) Collagen alpha-1(XI) chain precursor| Length = 1806 Score = 30.4 bits (67), Expect = 2.5 Identities = 23/50 (46%), Positives = 26/50 (52%), Gaps = 2/50 (4%) Frame = +2 Query: 14 PLARDSHGGARPDGERG--GVDGPPSGPARAGVPPGARGLRRRGNPAGQD 157 P R S G A P G RG G GPP GPA PG +G + PAG+D Sbjct: 1059 PGERGSAGTAGPIGLRGRPGPQGPP-GPAGEKGAPGEKGPQ---GPAGRD 1104 Score = 30.0 bits (66), Expect = 3.3 Identities = 18/50 (36%), Positives = 22/50 (44%), Gaps = 11/50 (22%) Frame = +2 Query: 35 GGARPDGERGGVDGPPSGPARAGVP-----------PGARGLRRRGNPAG 151 G P GERG GPP P G+P PG +G+ + PAG Sbjct: 976 GETGPIGERG-YPGPPGPPGEQGLPGAAGKEGAKGDPGPQGISGKDGPAG 1024 Score = 29.3 bits (64), Expect = 5.6 Identities = 17/48 (35%), Positives = 22/48 (45%) Frame = +2 Query: 14 PLARDSHGGARPDGERGGVDGPPSGPARAGVPPGARGLRRRGNPAGQD 157 P +D GG + + G GPP GP+ PPG G R AG + Sbjct: 1325 PAGQDGVGGDKGEDGDPGQPGPP-GPSGEAGPPGPPGKRGPPGAAGAE 1371 Score = 28.9 bits (63), Expect = 7.3 Identities = 17/42 (40%), Positives = 18/42 (42%), Gaps = 1/42 (2%) Frame = +2 Query: 29 SHGGARPDGERGGVDGP-PSGPARAGVPPGARGLRRRGNPAG 151 S GG GE G P P G A G P G RG + P G Sbjct: 1247 SVGGVGEKGEPGEAGNPGPPGEAGVGGPKGERGEKGEAGPPG 1288 Score = 28.5 bits (62), Expect = 9.6 Identities = 17/41 (41%), Positives = 20/41 (48%), Gaps = 2/41 (4%) Frame = +2 Query: 38 GARPDGERGGVDGP--PSGPARAGVPPGARGLRRRGNPAGQ 154 GA+ DG G GP P GP P G +G + PAGQ Sbjct: 1483 GAKGDGGIPGPAGPLGPPGPPGLPGPQGPKGNKGSTGPAGQ 1523
>CO3A1_MOUSE (P08121) Collagen alpha-1(III) chain precursor| Length = 1464 Score = 30.4 bits (67), Expect = 2.5 Identities = 21/45 (46%), Positives = 22/45 (48%), Gaps = 6/45 (13%) Frame = +2 Query: 29 SHGGARPDGERG--GVDGPPSGPARAGVPPGARGL----RRRGNP 145 S G A P G +G G G P GP AG PG RGL GNP Sbjct: 846 SSGPAGPPGPQGVKGERGSPGGPGTAGF-PGGRGLPGPPGNNGNP 889 Score = 30.4 bits (67), Expect = 2.5 Identities = 19/46 (41%), Positives = 21/46 (45%), Gaps = 7/46 (15%) Frame = +2 Query: 35 GGARPDGERG-----GVDGPPSGPARAGVP--PGARGLRRRGNPAG 151 GG P G RG G DG P GP G+P PG G + P G Sbjct: 509 GGPGPAGPRGVAGEPGRDGTPGGPGIRGMPGSPGGPGNDGKPGPPG 554 Score = 30.0 bits (66), Expect = 3.3 Identities = 19/42 (45%), Positives = 22/42 (52%), Gaps = 3/42 (7%) Frame = +2 Query: 29 SHGGARPDGERGGVDGP--PSGPARAGVPPGARGL-RRRGNP 145 + GGA P G GG GP P GP A PG +G+ RG P Sbjct: 693 ARGGAGPPGPEGG-KGPAGPPGPPGASGSPGLQGMPGERGGP 733 Score = 29.6 bits (65), Expect = 4.3 Identities = 19/34 (55%), Positives = 20/34 (58%), Gaps = 5/34 (14%) Frame = +2 Query: 38 GARP-DGERG--GVDGPPSGPARAGVP--PGARG 124 GAR DG RG G GPP P AG P PGA+G Sbjct: 317 GARGNDGARGSDGQPGPPGPPGTAGFPGSPGAKG 350 Score = 29.6 bits (65), Expect = 4.3 Identities = 15/33 (45%), Positives = 17/33 (51%), Gaps = 2/33 (6%) Frame = +2 Query: 65 GVDGPPSGPARAG--VPPGARGLRRRGNPAGQD 157 G GPP P +AG PPG G PAG+D Sbjct: 197 GYQGPPGEPGQAGPAGPPGPPGALGPAGPAGKD 229 Score = 28.5 bits (62), Expect = 9.6 Identities = 19/49 (38%), Positives = 24/49 (48%), Gaps = 3/49 (6%) Frame = +2 Query: 14 PLARDSHGGARPDGERG--GVDGPPSGPARAGVPPGARGLR-RRGNPAG 151 P A+ G GE G G GP AG PPG +G++ RG+P G Sbjct: 820 PGAKGERGAPGEKGEGGPPGPAGPTGSSGPAG-PPGPQGVKGERGSPGG 867
>ERME_SACER (P07287) rRNA adenine N-6-methyltransferase (EC 2.1.1.48)| (Macrolide-lincosamide-streptogramin B resistance protein) (Erythromycin resistance protein) (NMT) Length = 370 Score = 30.4 bits (67), Expect = 2.5 Identities = 16/33 (48%), Positives = 18/33 (54%) Frame = +2 Query: 26 DSHGGARPDGERGGVDGPPSGPARAGVPPGARG 124 D G R G++GG G PSG R G PG RG Sbjct: 334 DGRTGEREQGDQGGRRG-PSGGGRTGGRPGRRG 365
>KAD2_ORYSA (Q08480) Adenylate kinase B (EC 2.7.4.3) (ATP-AMP| transphosphorylase) Length = 243 Score = 30.4 bits (67), Expect = 2.5 Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 5/52 (9%) Frame = +3 Query: 219 GTDEVPAD-MVARRSEVVE----RLRALQEAVAPIVAFLSSPQLVQELHADK 359 G D+V + ++ R+ + E RL A + P++ + S LV LHA+K Sbjct: 178 GVDDVTGEPLIQRKDDTAEVLKSRLEAFHKQTEPVIDYYSKKALVANLHAEK 229
>GAG_IPMA (P11365) Retrovirus-related Gag polyprotein [Contains: Protease (EC| 3.4.23.-)] Length = 827 Score = 30.4 bits (67), Expect = 2.5 Identities = 17/49 (34%), Positives = 24/49 (48%) Frame = +3 Query: 207 KSLHGTDEVPADMVARRSEVVERLRALQEAVAPIVAFLSSPQLVQELHA 353 K + G E +D VAR +E ER+ E AP++ L Q +E A Sbjct: 363 KVVQGPQESFSDFVARMTEAAERIFGESEQAAPLIEQLIYEQATKECRA 411
>FBRL_ASHGO (Q756P0) Fibrillarin| Length = 326 Score = 30.4 bits (67), Expect = 2.5 Identities = 21/43 (48%), Positives = 21/43 (48%), Gaps = 1/43 (2%) Frame = +2 Query: 26 DSHGGARPD-GERGGVDGPPSGPARAGVPPGARGLRRRGNPAG 151 DS GGAR G RGG G P G R G G RG R G G Sbjct: 43 DSRGGARGGFGGRGGSRGGPRGGPRGGA-RGGRGGARGGAKGG 84
>CO1A2_ONCMY (O93484) Collagen alpha-2(I) chain precursor| Length = 1356 Score = 30.4 bits (67), Expect = 2.5 Identities = 21/54 (38%), Positives = 23/54 (42%), Gaps = 4/54 (7%) Frame = +2 Query: 2 KP*HPLARDSHGGARPDGERGGVDGP----PSGPARAGVPPGARGLRRRGNPAG 151 +P P A S G P+G G P SGP G P GA G R PAG Sbjct: 944 EPGSPGALGSSGQPGPNGPAGSAGRPGNRGESGPTGNGGPVGAVGARGAPGPAG 997
>Y1276_XYLFT (Q87C20) UPF0301 protein PD1276| Length = 188 Score = 30.4 bits (67), Expect = 2.5 Identities = 21/76 (27%), Positives = 34/76 (44%), Gaps = 5/76 (6%) Frame = +3 Query: 6 PSIPSPETA-----MAEHDLTASVAAWMDPHLVLPVLEFLQERGVYADEETLRGKIRLLG 170 PS+P P A + +HD ++ ++ + E L + G+ ETLR ++ L G Sbjct: 17 PSMPDPHFARGVALICQHDSNGAMGVVLNRPSEYTLGEVLFQMGIETASETLREQVVLAG 76 Query: 171 GTNMVDYAMDIHKSLH 218 G D I+ S H Sbjct: 77 GPVHPDRGFVIYDSEH 92
>COIA1_HUMAN (P39060) Collagen alpha-1(XVIII) chain precursor [Contains:| Endostatin] Length = 1516 Score = 30.4 bits (67), Expect = 2.5 Identities = 22/50 (44%), Positives = 24/50 (48%), Gaps = 2/50 (4%) Frame = +2 Query: 14 PLARDSHGGARPDGERG--GVDGPPSGPARAGVPPGARGLRRRGNPAGQD 157 P + S G P G RG G+ G P GPA PPG G G PAG D Sbjct: 744 PGHKGSKGAPGPAGARGESGLAGAP-GPAGPPGPPGPPGPPGPGLPAGFD 792
>CO1A2_RANCA (O42350) Collagen alpha-2(I) chain precursor| Length = 1355 Score = 30.0 bits (66), Expect = 3.3 Identities = 22/54 (40%), Positives = 26/54 (48%), Gaps = 8/54 (14%) Frame = +2 Query: 14 PLARDSHGGARPDGERG--------GVDGPPSGPARAGVPPGARGLRRRGNPAG 151 P RD GA+ GERG G+ G P GPA + P G G R G P+G Sbjct: 926 PPGRDGLPGAK--GERGYPGNTGPSGLAGAP-GPAGSAGPAGKSGNRGEGGPSG 976 Score = 28.9 bits (63), Expect = 7.3 Identities = 17/44 (38%), Positives = 22/44 (50%) Frame = +2 Query: 20 ARDSHGGARPDGERGGVDGPPSGPARAGVPPGARGLRRRGNPAG 151 A + G A G+RG + P+GP+ P GA G R PAG Sbjct: 671 AAGAPGPAGGPGDRG--ESGPAGPSGVAGPRGAPGERGEAGPAG 712 Score = 28.5 bits (62), Expect = 9.6 Identities = 13/26 (50%), Positives = 16/26 (61%) Frame = +2 Query: 47 PDGERGGVDGPPSGPARAGVPPGARG 124 PDG GG+ P+G + PPGARG Sbjct: 401 PDGRAGGIG--PAGSRGSSGPPGARG 424
>ADA1D_MOUSE (P97714) Alpha-1D adrenergic receptor (Alpha 1D-adrenoceptor)| (Alpha 1D-adrenoreceptor) (Alpha-1A adrenergic receptor) Length = 562 Score = 30.0 bits (66), Expect = 3.3 Identities = 19/48 (39%), Positives = 22/48 (45%) Frame = +2 Query: 14 PLARDSHGGARPDGERGGVDGPPSGPARAGVPPGARGLRRRGNPAGQD 157 P A S GG+ G G V P GPA GVP G G +G+D Sbjct: 14 PRASSSTGGSGAGGGAGTVG--PEGPAVGGVPGATGGSAVVGTGSGED 59
>GRASP_MOUSE (Q9JJA9) General receptor for phosphoinositides 1-associated| scaffold protein (GRP1-associated scaffold protein) Length = 392 Score = 30.0 bits (66), Expect = 3.3 Identities = 14/29 (48%), Positives = 14/29 (48%) Frame = +2 Query: 38 GARPDGERGGVDGPPSGPARAGVPPGARG 124 G PD E PSGP A PPGA G Sbjct: 23 GRAPDSEAARAAPLPSGPPAAAAPPGAPG 51
>GAG_IPHA (P04023) Retrovirus-related Gag polyprotein [Contains: Protease (EC| 3.4.23.-)] Length = 572 Score = 29.6 bits (65), Expect = 4.3 Identities = 21/90 (23%), Positives = 41/90 (45%), Gaps = 1/90 (1%) Frame = +3 Query: 87 VLPVL-EFLQERGVYADEETLRGKIRLLGGTNMVDYAMDIHKSLHGTDEVPADMVARRSE 263 VLP + ++++ + ++ D + ++ G + + + K + G E +D VAR +E Sbjct: 316 VLPNMGQYMEWKALWYDAAQAQARVNATAGRS----SGHLTKIVQGPQEPFSDFVARMTE 371 Query: 264 VVERLRALQEAVAPIVAFLSSPQLVQELHA 353 R+ E P++ L Q QE A Sbjct: 372 AASRIFGDSEQAMPLIEQLVYEQATQECRA 401
>EMID1_HUMAN (Q96A84) EMI domain-containing protein 1 precursor (Protein Emu1)| (Emilin and multimerin domain-containing protein 1) Length = 441 Score = 29.6 bits (65), Expect = 4.3 Identities = 19/43 (44%), Positives = 19/43 (44%), Gaps = 4/43 (9%) Frame = +2 Query: 35 GGARPDGERG--GVDGPPSGPARAGV--PPGARGLRRRGNPAG 151 G P G RG G GPP P RAG PG RG P G Sbjct: 212 GSRGPMGMRGPPGPQGPPGSPGRAGAVGTPGERGPPGPPGPPG 254
>COBA1_MOUSE (Q61245) Collagen alpha-1(XI) chain precursor| Length = 1804 Score = 29.6 bits (65), Expect = 4.3 Identities = 18/50 (36%), Positives = 22/50 (44%), Gaps = 11/50 (22%) Frame = +2 Query: 35 GGARPDGERGGVDGPPSGPARAGVP-----------PGARGLRRRGNPAG 151 G P GERG GPP P G+P PG +G+ + PAG Sbjct: 974 GETGPIGERGH-PGPPGPPGEQGLPGAAGKEGAKGDPGPQGISGKDGPAG 1022 Score = 28.5 bits (62), Expect = 9.6 Identities = 20/55 (36%), Positives = 24/55 (43%), Gaps = 9/55 (16%) Frame = +2 Query: 14 PLARDSHGGAR-PDGERG--------GVDGPPSGPARAGVPPGARGLRRRGNPAG 151 P +D GG + DG+ G G GPP P + G PPGA G R G Sbjct: 1323 PAGQDGVGGDKGEDGDPGQPGPPGPSGEAGPPGPPGKRG-PPGASGSEGRQGEKG 1376 Score = 28.5 bits (62), Expect = 9.6 Identities = 22/50 (44%), Positives = 25/50 (50%), Gaps = 2/50 (4%) Frame = +2 Query: 14 PLARDSHGGARPDGERG--GVDGPPSGPARAGVPPGARGLRRRGNPAGQD 157 P R S G A P G G G GPP GPA PG +G + PAG+D Sbjct: 1057 PGERGSAGAAGPIGLPGRPGPQGPP-GPAGEKGAPGEKGPQ---GPAGRD 1102
>CO1A1_HUMAN (P02452) Collagen alpha-1(I) chain precursor| Length = 1464 Score = 29.6 bits (65), Expect = 4.3 Identities = 18/48 (37%), Positives = 19/48 (39%), Gaps = 5/48 (10%) Frame = +2 Query: 23 RDSHGGARPDGERGGVDGPPSGPARAGV-----PPGARGLRRRGNPAG 151 RD GA+ D G GPP P G P G G R PAG Sbjct: 1026 RDGSPGAKGDRGETGPAGPPGAPGAPGAPGPVGPAGKSGDRGETGPAG 1073
>SHAN1_RAT (Q9WV48) SH3 and multiple ankyrin repeat domains protein 1 (Shank1)| (GKAP/SAPAP-interacting protein) (SPANK-1) (Synamon) (Somatostatin receptor-interacting protein) (SSTR-interacting protein) (SSTRIP) Length = 2167 Score = 29.6 bits (65), Expect = 4.3 Identities = 13/36 (36%), Positives = 18/36 (50%) Frame = +2 Query: 44 RPDGERGGVDGPPSGPARAGVPPGARGLRRRGNPAG 151 +PDG GG P PA + VPP + +P+G Sbjct: 1191 QPDGAGGGGSSPSPAPATSPVPPSPSPVPTPASPSG 1226
>CO8A2_MOUSE (P25318) Collagen alpha-2(VIII) chain precursor (Endothelial| collagen) Length = 699 Score = 29.6 bits (65), Expect = 4.3 Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 7/40 (17%) Frame = +2 Query: 53 GERG--GVDGPPSGPARAGV-----PPGARGLRRRGNPAG 151 GE+G G+ GPP P AG+ PPG++G G P G Sbjct: 345 GEQGPQGLGGPPGLPGSAGLPGRRGPPGSKGEVGPGGPPG 384
>ABC3G_MACMU (Q7YR23) DNA dC->dU-editing enzyme APOBEC-3G (EC 3.5.4.-)| (Fragment) Length = 370 Score = 29.6 bits (65), Expect = 4.3 Identities = 10/27 (37%), Positives = 14/27 (51%) Frame = -3 Query: 400 PMWWRSWSMWRLYCLSAWSSCTSCGLE 320 P W +R+ C ++WS C SC E Sbjct: 260 PFWKLDGQQYRVTCFTSWSPCFSCAQE 286
>VGLB_MCMVS (P27171) Glycoprotein B precursor| Length = 928 Score = 29.6 bits (65), Expect = 4.3 Identities = 17/40 (42%), Positives = 19/40 (47%), Gaps = 3/40 (7%) Frame = +2 Query: 47 PDGERGGVDGPPSGPARAGV---PPGARGLRRRGNPAGQD 157 P + V P G A G+ PPGA GL RR N G D Sbjct: 813 PYATQTAVQYAPPGGAHGGLESGPPGAPGLHRRVNAGGSD 852
>IF2_DESVH (Q72ER1) Translation initiation factor IF-2| Length = 1079 Score = 29.6 bits (65), Expect = 4.3 Identities = 17/43 (39%), Positives = 20/43 (46%) Frame = +2 Query: 23 RDSHGGARPDGERGGVDGPPSGPARAGVPPGARGLRRRGNPAG 151 R + G RP+G+R G P GP R G P G G P G Sbjct: 390 RPAGGAPRPEGQREGGYRPAGGPPRPGGAPRPGGF--GGAPGG 430
>ABC3G_PAPAN (Q694B7) DNA dC->dU-editing enzyme APOBEC-3G (EC 3.5.4.-)| Length = 383 Score = 29.6 bits (65), Expect = 4.3 Identities = 10/27 (37%), Positives = 14/27 (51%) Frame = -3 Query: 400 PMWWRSWSMWRLYCLSAWSSCTSCGLE 320 P W +R+ C ++WS C SC E Sbjct: 267 PFWKLDGQQYRVTCFTSWSPCFSCAQE 293
>ABC3G_MACNG (Q694C4) DNA dC->dU-editing enzyme APOBEC-3G (EC 3.5.4.-)| Length = 383 Score = 29.6 bits (65), Expect = 4.3 Identities = 10/27 (37%), Positives = 14/27 (51%) Frame = -3 Query: 400 PMWWRSWSMWRLYCLSAWSSCTSCGLE 320 P W +R+ C ++WS C SC E Sbjct: 267 PFWKLDGQQYRVTCFTSWSPCFSCAQE 293
>ABC3G_MACFA (Q694C2) DNA dC->dU-editing enzyme APOBEC-3G (EC 3.5.4.-)| Length = 384 Score = 29.6 bits (65), Expect = 4.3 Identities = 10/27 (37%), Positives = 14/27 (51%) Frame = -3 Query: 400 PMWWRSWSMWRLYCLSAWSSCTSCGLE 320 P W +R+ C ++WS C SC E Sbjct: 268 PFWKLDGQQYRVTCFTSWSPCFSCAQE 294
>CO8A2_HUMAN (P25067) Collagen alpha-2(VIII) chain precursor (Endothelial| collagen) Length = 703 Score = 29.6 bits (65), Expect = 4.3 Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 7/40 (17%) Frame = +2 Query: 53 GERG--GVDGPPSGPARAGV-----PPGARGLRRRGNPAG 151 GE+G G+ GPP P AG+ PPG +G G P G Sbjct: 349 GEQGPQGLGGPPGLPGSAGLPGRRGPPGPKGEAGPGGPPG 388
>Y926_STRP8 (Q8P1E4) Hypothetical UPF0230 protein spyM18_0926| Length = 282 Score = 29.6 bits (65), Expect = 4.3 Identities = 16/62 (25%), Positives = 35/62 (56%) Frame = +3 Query: 264 VVERLRALQEAVAPIVAFLSSPQLVQELHADKQYNLHMLQERHHIGPDQIEALYQYAKFQ 443 V E++R ++A+ +V +++ +L AD QYN+ ++ + D ++ L Q + +Q Sbjct: 200 VYEKVRTEKKAMKRLV------EILNDLIADGQYNVSIIHSKAQDKADYLKRLLQDSGYQ 253 Query: 444 YE 449 Y+ Sbjct: 254 YD 255
>Y865_STRP1 (Q9A0A6) Hypothetical UPF0230 protein SPy0865/M5005_Spy0672| Length = 282 Score = 29.6 bits (65), Expect = 4.3 Identities = 16/62 (25%), Positives = 35/62 (56%) Frame = +3 Query: 264 VVERLRALQEAVAPIVAFLSSPQLVQELHADKQYNLHMLQERHHIGPDQIEALYQYAKFQ 443 V E++R ++A+ +V +++ +L AD QYN+ ++ + D ++ L Q + +Q Sbjct: 200 VYEKVRTEKKAMKRLV------EILNDLIADGQYNVFIIHSKAQDKADYLKRLLQDSGYQ 253 Query: 444 YE 449 Y+ Sbjct: 254 YD 255
>Y690_STRP6 (Q5XCN8) Hypothetical UPF0230 protein M6_Spy0690| Length = 282 Score = 29.6 bits (65), Expect = 4.3 Identities = 16/62 (25%), Positives = 35/62 (56%) Frame = +3 Query: 264 VVERLRALQEAVAPIVAFLSSPQLVQELHADKQYNLHMLQERHHIGPDQIEALYQYAKFQ 443 V E++R ++A+ +V +++ +L AD QYN+ ++ + D ++ L Q + +Q Sbjct: 200 VYEKVRTEKKAMKRLV------EILNDLIADGQYNVSIIHSKAQDKADYLKRLLQDSGYQ 253 Query: 444 YE 449 Y+ Sbjct: 254 YD 255
>Y586_STRP3 (Q8K7W6) Hypothetical UPF0230 protein SpyM3_0586/SPs1267| Length = 282 Score = 29.6 bits (65), Expect = 4.3 Identities = 16/62 (25%), Positives = 35/62 (56%) Frame = +3 Query: 264 VVERLRALQEAVAPIVAFLSSPQLVQELHADKQYNLHMLQERHHIGPDQIEALYQYAKFQ 443 V E++R ++A+ +V +++ +L AD QYN+ ++ + D ++ L Q + +Q Sbjct: 200 VYEKVRTEKKAMKRLV------EILNDLIADGQYNVSIIHSKAQDKADYLKRLLQDSGYQ 253 Query: 444 YE 449 Y+ Sbjct: 254 YD 255
>PP1RA_XENLA (Q6GLQ4) Serine/threonine-protein phosphatase 1 regulatory subunit| 10 Length = 819 Score = 29.6 bits (65), Expect = 4.3 Identities = 22/55 (40%), Positives = 23/55 (41%), Gaps = 8/55 (14%) Frame = +2 Query: 5 P*HPLARDSHGGARPDGERGGVDGPPSGP-----ARAGVPPGARGLRR---RGNP 145 P L SH G G RGG GPP P G PG RG R RG+P Sbjct: 694 PNENLRGGSHHGGERGGMRGGDRGPPPPPFHRNRGGRGGEPGYRGRGRGGERGHP 748
>CO2A1_HUMAN (P02458) Collagen alpha-1(II) chain precursor [Contains:| Chondrocalcin] Length = 1418 Score = 29.6 bits (65), Expect = 4.3 Identities = 21/56 (37%), Positives = 24/56 (42%), Gaps = 10/56 (17%) Frame = +2 Query: 14 PLARDSHGGARPDGERG-----GVDGP-----PSGPARAGVPPGARGLRRRGNPAG 151 P R S G G RG G DGP P+GP A PPG +G+ AG Sbjct: 635 PGERGSPGAQGLQGPRGLPGTPGTDGPKGASGPAGPPGAQGPPGLQGMPGERGAAG 690 Score = 28.5 bits (62), Expect = 9.6 Identities = 18/41 (43%), Positives = 20/41 (48%), Gaps = 8/41 (19%) Frame = +2 Query: 53 GERG--------GVDGPPSGPARAGVPPGARGLRRRGNPAG 151 GERG G +G P P G+P GARGL R AG Sbjct: 462 GERGPSGLAGPKGANGDPGRPGEPGLP-GARGLTGRPGDAG 501
>CO1A1_RAT (P02454) Collagen alpha-1(I) chain precursor| Length = 1453 Score = 29.6 bits (65), Expect = 4.3 Identities = 18/48 (37%), Positives = 19/48 (39%), Gaps = 5/48 (10%) Frame = +2 Query: 23 RDSHGGARPDGERGGVDGPPSGPARAGV-----PPGARGLRRRGNPAG 151 RD GA+ D G GPP P G P G G R PAG Sbjct: 1015 RDGAPGAKGDRGETGPAGPPGAPGAPGAPGPVGPAGKNGDRGETGPAG 1062 Score = 28.5 bits (62), Expect = 9.6 Identities = 18/53 (33%), Positives = 24/53 (45%), Gaps = 3/53 (5%) Frame = +2 Query: 5 P*HPLARDSHGGARPDGERGGVDGPP---SGPARAGVPPGARGLRRRGNPAGQ 154 P P + GAR + G+ GPP GP G PGA G+ P+G+ Sbjct: 448 PPGPAGEEGKRGARGEPGPSGLPGPPGERGGPGSRGF-PGADGVAGPKGPSGE 499
>CO1A1_MOUSE (P11087) Collagen alpha-1(I) chain precursor| Length = 1453 Score = 29.6 bits (65), Expect = 4.3 Identities = 18/48 (37%), Positives = 19/48 (39%), Gaps = 5/48 (10%) Frame = +2 Query: 23 RDSHGGARPDGERGGVDGPPSGPARAGV-----PPGARGLRRRGNPAG 151 RD GA+ D G GPP P G P G G R PAG Sbjct: 1015 RDGAPGAKGDRGETGPAGPPGAPGAPGAPGPVGPAGKNGDRGETGPAG 1062 Score = 29.6 bits (65), Expect = 4.3 Identities = 16/31 (51%), Positives = 16/31 (51%), Gaps = 1/31 (3%) Frame = +2 Query: 35 GGARPDGERGGVDGP-PSGPARAGVPPGARG 124 G A P G G V P P GP A PPGA G Sbjct: 834 GPAGPPGPIGNVGAPGPKGPRGAAGPPGATG 864 Score = 28.5 bits (62), Expect = 9.6 Identities = 18/46 (39%), Positives = 19/46 (41%) Frame = +2 Query: 14 PLARDSHGGARPDGERGGVDGPPSGPARAGVPPGARGLRRRGNPAG 151 P+ GA D G GPP GP A PG RG PAG Sbjct: 757 PIGPPGPAGAPGDKGEAGPSGPP-GPTGARGAPGDRGEAGPPGPAG 801 Score = 28.5 bits (62), Expect = 9.6 Identities = 18/53 (33%), Positives = 24/53 (45%), Gaps = 3/53 (5%) Frame = +2 Query: 5 P*HPLARDSHGGARPDGERGGVDGPP---SGPARAGVPPGARGLRRRGNPAGQ 154 P P + GAR + G+ GPP GP G PGA G+ P+G+ Sbjct: 448 PPGPAGEEGKRGARGEPGPSGLPGPPGERGGPGSRGF-PGADGVAGPKGPSGE 499
>TAF6L_HUMAN (Q9Y6J9) TAF6-like RNA polymerase II p300/CBP-associated| factor-associated factor 65 kDa subunit 6L (PCAF-associated factor 65 alpha) (PAF65-alpha) Length = 622 Score = 29.3 bits (64), Expect = 5.6 Identities = 17/41 (41%), Positives = 18/41 (43%) Frame = +2 Query: 32 HGGARPDGERGGVDGPPSGPARAGVPPGARGLRRRGNPAGQ 154 HG P G GG SGPA + P R R RG P Q Sbjct: 497 HGDESPRGSGGGGPASASGPAASESRPLPRVHRARGAPRQQ 537
>MKL1_HUMAN (Q969V6) MKL/myocardin-like protein 1 (Myocardin-related| transcription factor A) (MRTF-A) (Megakaryoblastic leukemia 1 protein) (Megacaryocytic acute leukemia protein) Length = 931 Score = 29.3 bits (64), Expect = 5.6 Identities = 15/55 (27%), Positives = 27/55 (49%) Frame = +3 Query: 255 RSEVVERLRALQEAVAPIVAFLSSPQLVQELHADKQYNLHMLQERHHIGPDQIEA 419 ++E++ERLRA Q+ ++P+ +P LH + + R GP + A Sbjct: 370 KTELIERLRAYQDQISPVPGAPKAPAATSILHKAGEVVVAFPAARLSTGPALVAA 424
>CO2A1_RAT (P05539) Collagen alpha-1(II) chain precursor [Contains:| Chondrocalcin] Length = 1419 Score = 29.3 bits (64), Expect = 5.6 Identities = 21/56 (37%), Positives = 23/56 (41%), Gaps = 10/56 (17%) Frame = +2 Query: 14 PLARDSHGGARPDGERG-----GVDGP-----PSGPARAGVPPGARGLRRRGNPAG 151 P R S G G RG G DGP P GP A PPG +G+ AG Sbjct: 636 PGERGSPGAQGLQGPRGLPGTPGTDGPKGAAGPDGPPGAQGPPGLQGMPGERGAAG 691 Score = 28.5 bits (62), Expect = 9.6 Identities = 18/41 (43%), Positives = 20/41 (48%), Gaps = 8/41 (19%) Frame = +2 Query: 53 GERG--------GVDGPPSGPARAGVPPGARGLRRRGNPAG 151 GERG G +G P P G+P GARGL R AG Sbjct: 463 GERGPSGLAGPKGANGDPGRPGEPGLP-GARGLTGRPGDAG 502
>XKR7_RAT (Q5GH56) XK-related protein 7| Length = 580 Score = 29.3 bits (64), Expect = 5.6 Identities = 17/36 (47%), Positives = 18/36 (50%), Gaps = 2/36 (5%) Frame = +2 Query: 38 GARPDGERGGVDGPPSGPARAGVPPG--ARGLRRRG 139 GA GER G PP R G+PP AR LR G Sbjct: 486 GAAVGGERAGTPTPPVFQVRPGLPPTPVARPLRTEG 521
>COBA1_BOVIN (Q28083) Collagen alpha-1(XI) chain precursor (Fragment)| Length = 911 Score = 29.3 bits (64), Expect = 5.6 Identities = 18/50 (36%), Positives = 22/50 (44%), Gaps = 11/50 (22%) Frame = +2 Query: 35 GGARPDGERGGVDGPPSGPARAGVP-----------PGARGLRRRGNPAG 151 G P GERG GPP P G+P PG +G+ + PAG Sbjct: 743 GETGPIGERGH-PGPPGPPGEQGLPGAAGKEGAKGDPGPQGVSGKDGPAG 791
>FUBP2_RAT (Q99PF5) Far upstream element-binding protein 2 (FUSE-binding| protein 2) (KH type splicing regulatory protein) (KSRP) (MAP2 RNA trans-acting protein 1) (MARTA1) Length = 721 Score = 29.3 bits (64), Expect = 5.6 Identities = 14/31 (45%), Positives = 16/31 (51%), Gaps = 4/31 (12%) Frame = +2 Query: 74 GPPSGPARAGVPPGARGLRRR----GNPAGQ 154 GPP P G+PPG RG R G P G+ Sbjct: 397 GPPGPPGAPGMPPGGRGRGRGQGNWGPPGGE 427
>CO5A3_HUMAN (P25940) Collagen alpha-3(V) chain precursor| Length = 1745 Score = 29.3 bits (64), Expect = 5.6 Identities = 17/42 (40%), Positives = 20/42 (47%), Gaps = 2/42 (4%) Frame = +2 Query: 32 HGGARPDGERGGVDGPPS--GPARAGVPPGARGLRRRGNPAG 151 H G++ D G G P GPA PPGA G + R P G Sbjct: 1086 HKGSKGDKGDAGPPGQPGIRGPAGHPGPPGADGAQGRRGPPG 1127 Score = 28.9 bits (63), Expect = 7.3 Identities = 18/33 (54%), Positives = 21/33 (63%), Gaps = 1/33 (3%) Frame = +2 Query: 50 DGERGGVDGPPSGPARAGVPPGARG-LRRRGNP 145 DGERG +GPP +AG PG RG L RG+P Sbjct: 580 DGERGA-EGPPGPTGQAG-EPGPRGLLGPRGSP 610
>WN10A_HUMAN (Q9GZT5) Protein Wnt-10a precursor| Length = 417 Score = 29.3 bits (64), Expect = 5.6 Identities = 19/36 (52%), Positives = 20/36 (55%), Gaps = 1/36 (2%) Frame = +2 Query: 44 RPDGERGGVDGPPSGPARAGVP-PGARGLRRRGNPA 148 RP GG P GPA A P PGA G RRR +PA Sbjct: 301 RPHNRNGGQLEP--GPAGAPSPAPGAPGPRRRASPA 334
>CO2A1_MOUSE (P28481) Collagen alpha-1(II) chain precursor [Contains:| Chondrocalcin] Length = 1459 Score = 29.3 bits (64), Expect = 5.6 Identities = 21/56 (37%), Positives = 23/56 (41%), Gaps = 10/56 (17%) Frame = +2 Query: 14 PLARDSHGGARPDGERG-----GVDGP-----PSGPARAGVPPGARGLRRRGNPAG 151 P R S G G RG G DGP P GP A PPG +G+ AG Sbjct: 676 PGERGSPGAQGLQGPRGLPGTPGTDGPKGAAGPDGPPGAQGPPGLQGMPGERGAAG 731 Score = 28.5 bits (62), Expect = 9.6 Identities = 18/41 (43%), Positives = 20/41 (48%), Gaps = 8/41 (19%) Frame = +2 Query: 53 GERG--------GVDGPPSGPARAGVPPGARGLRRRGNPAG 151 GERG G +G P P G+P GARGL R AG Sbjct: 503 GERGPSGLAGPKGANGDPGRPGEPGLP-GARGLTGRPGDAG 542
>CO6A1_HUMAN (P12109) Collagen alpha-1(VI) chain precursor| Length = 1028 Score = 29.3 bits (64), Expect = 5.6 Identities = 20/56 (35%), Positives = 23/56 (41%), Gaps = 13/56 (23%) Frame = +2 Query: 23 RDSHGGARPDGERG--GVDGPPSGPARAGV-----------PPGARGLRRRGNPAG 151 R G A P G++G G G P P AG PPG+ G R PAG Sbjct: 442 RGDPGEAGPQGDQGREGPVGVPGDPGEAGPIGPKGYRGDEGPPGSEGARGAPGPAG 497
>YLS6_CAEEL (P34391) Putative cuticle collagen F09G8.6| Length = 278 Score = 29.3 bits (64), Expect = 5.6 Identities = 19/48 (39%), Positives = 22/48 (45%), Gaps = 7/48 (14%) Frame = +2 Query: 35 GGARPDGE-----RGGVDGP--PSGPARAGVPPGARGLRRRGNPAGQD 157 G A PDG+ +GG GP P GPA PGA G GQ+ Sbjct: 149 GPAGPDGQPGADGQGGAPGPAGPEGPAGDAGAPGAPGAPGNDGQPGQN 196
>PALI_MAGGR (Q51MB1) pH-response regulator protein palI/RIM9| Length = 736 Score = 29.3 bits (64), Expect = 5.6 Identities = 18/41 (43%), Positives = 20/41 (48%), Gaps = 4/41 (9%) Frame = +2 Query: 38 GARPDGERGGVDGPPSG----PARAGVPPGARGLRRRGNPA 148 G P+G RGG PP G P R PP RRG+PA Sbjct: 354 GPGPNG-RGGYGPPPRGGYGPPMRGRAPPPGYQYDRRGSPA 393 Score = 28.5 bits (62), Expect = 9.6 Identities = 18/44 (40%), Positives = 19/44 (43%) Frame = +2 Query: 14 PLARDSHGGARPDGERGGVDGPPSGPARAGVPPGARGLRRRGNP 145 P R +G P G RGG GP P R G PG G G P Sbjct: 327 PPGRGGYGYGPPPGSRGGY-GP---PGRGGYGPGPNGRGGYGPP 366
>DVL2_MOUSE (Q60838) Segment polarity protein dishevelled homolog DVL-2| (Dishevelled-2) (DSH homolog 2) Length = 736 Score = 29.3 bits (64), Expect = 5.6 Identities = 18/44 (40%), Positives = 19/44 (43%), Gaps = 5/44 (11%) Frame = +2 Query: 35 GGARPDGERGGVD--GPPSGPARAGVPPGAR---GLRRRGNPAG 151 G R GE GG GPP G PP R GL G P+G Sbjct: 629 GSLRRGGEPGGTGDGGPPPSRGSTGAPPNLRALPGLHPYGAPSG 672
>CO1A2_MOUSE (Q01149) Collagen alpha-2(I) chain precursor| Length = 1372 Score = 28.9 bits (63), Expect = 7.3 Identities = 20/51 (39%), Positives = 23/51 (45%), Gaps = 5/51 (9%) Frame = +2 Query: 14 PLARDSHGGARPDGERGGVDGPP-----SGPARAGVPPGARGLRRRGNPAG 151 P A+ G P GE G V GP +GP+ PPG G R G P G Sbjct: 741 PGAKGEKGTKGPKGENGIV-GPTGSVGAAGPSGPNGPPGPVGSRGDGGPPG 790
>ADA1D_HUMAN (P25100) Alpha-1D adrenergic receptor (Alpha 1D-adrenoceptor)| (Alpha 1D-adrenoreceptor) (Alpha-1A adrenergic receptor) (Alpha adrenergic receptor 1a) Length = 572 Score = 28.9 bits (63), Expect = 7.3 Identities = 17/39 (43%), Positives = 18/39 (46%), Gaps = 2/39 (5%) Frame = +2 Query: 14 PLARDSHGGARPDGERGGVDG--PPSGPARAGVPPGARG 124 P S GG+ G G G P GPA GVP GA G Sbjct: 14 PRPDSSAGGSSAGGGGGSAGGAAPSEGPAVGGVPGGAGG 52
>HIS1_DEIRA (Q9RUE2) ATP phosphoribosyltransferase (EC 2.4.2.17) (ATP-PRTase)| (ATP-PRT) Length = 218 Score = 28.9 bits (63), Expect = 7.3 Identities = 22/79 (27%), Positives = 39/79 (49%), Gaps = 7/79 (8%) Frame = +3 Query: 105 FLQERGVYADEETLRGKIRLLGGTNMVDYAMDIHKS-----LHGTDEVPADMVARRSEVV 269 +LQERG+ A+ L G I L T + D +D+ ++ + +EV + +V Sbjct: 129 YLQERGIPAEVVKLSGNIELAALTGLADAVIDLVQTGSTLRANHLEEVDVLFHSSARLIV 188 Query: 270 ER--LRALQEAVAPIVAFL 320 R L+ +E + P++A L Sbjct: 189 NRTALKLRRERLRPLIARL 207
>GPDA_COXBU (Q83BJ0) Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94)| (NAD(P)H-dependent glycerol-3-phosphate dehydrogenase) Length = 332 Score = 28.9 bits (63), Expect = 7.3 Identities = 32/140 (22%), Positives = 53/140 (37%) Frame = +3 Query: 6 PSIPSPETAMAEHDLTASVAAWMDPHLVLPVLEFLQERGVYADEETLRGKIRLLGGTNMV 185 P+ P PET A DL AS+ D +V+P F + + + K R+ GT Sbjct: 55 PNYPFPETLKAYCDLKASLEGVTDILIVVPSFAF--HEVITRMKPLIDAKTRIAWGTK-- 110 Query: 186 DYAMDIHKSLHGTDEVPADMVARRSEVVERLRALQEAVAPIVAFLSSPQLVQELHADKQY 365 +A+ S ++ + A + P +A +S P L E+ A+ Sbjct: 111 -------------------GLAKGSRLLHEVVATELGQVP-MAVISGPSLATEVAANLPT 150 Query: 366 NLHMLQERHHIGPDQIEALY 425 + + D IE L+ Sbjct: 151 AVSLASNNSQFSKDLIERLH 170
>CAC1B_RAT (Q02294) Voltage-dependent N-type calcium channel alpha-1B subunit| (Voltage-gated calcium channel alpha subunit Cav2.2) (Calcium channel, L type, alpha-1 polypeptide isoform 5) (Brain calcium channel III) (BIII) Length = 2336 Score = 28.9 bits (63), Expect = 7.3 Identities = 15/34 (44%), Positives = 19/34 (55%) Frame = +2 Query: 35 GGARPDGERGGVDGPPSGPARAGVPPGARGLRRR 136 GG R RGG G GP + G+PPG R L ++ Sbjct: 17 GGERA---RGGGAGGAGGPGQGGLPPGQRVLYKQ 47
>KPC1_ASPNG (Q00078) Protein kinase C-like (EC 2.7.11.13)| Length = 1096 Score = 28.9 bits (63), Expect = 7.3 Identities = 19/43 (44%), Positives = 19/43 (44%), Gaps = 3/43 (6%) Frame = +2 Query: 32 HGGA--RPDGERGGVDGPPSGPARAGVPPG-ARGLRRRGNPAG 151 HGGA RPD G PSGP G P G G PAG Sbjct: 362 HGGAPGRPDTAGGAGSAHPSGPGGPGAAPSQGYGDGSAGAPAG 404
>CO1A1_CANFA (Q9XSJ7) Collagen alpha-1(I) chain precursor| Length = 1460 Score = 28.9 bits (63), Expect = 7.3 Identities = 18/46 (39%), Positives = 19/46 (41%), Gaps = 7/46 (15%) Frame = +2 Query: 35 GGARPDGERG--GVDGPPSGPARAGV-----PPGARGLRRRGNPAG 151 G P G+RG G GPP P G P G G R PAG Sbjct: 1024 GSPGPKGDRGETGPAGPPGAPGAPGAPGPVGPAGKNGDRGETGPAG 1069
>YRF2_CAEEL (Q09578) Putative cuticle collagen K03H9.2| Length = 285 Score = 28.9 bits (63), Expect = 7.3 Identities = 16/39 (41%), Positives = 19/39 (48%), Gaps = 2/39 (5%) Frame = +2 Query: 47 PDGERG--GVDGPPSGPARAGVPPGARGLRRRGNPAGQD 157 P G+ G G+DGPP P G PG RG+ G D Sbjct: 134 PKGKSGYKGIDGPPGIPGWPG-EPGVRGMNGERGSTGLD 171
>HYDL_STRCO (P42534) Putative polyketide hydroxylase (EC 1.14.13.-) (WhiE ORF| VIII) Length = 627 Score = 28.9 bits (63), Expect = 7.3 Identities = 16/41 (39%), Positives = 16/41 (39%), Gaps = 2/41 (4%) Frame = +2 Query: 35 GGARPDGERGGVDGP--PSGPARAGVPPGARGLRRRGNPAG 151 G P G G GP P GP G P G G G P G Sbjct: 401 GAGTPGGAGRGTGGPGGPGGPGGLGGPGGPGGTGGPGGPGG 441
>RLUB_PSEAE (Q9HZ55) Ribosomal large subunit pseudouridine synthase B (EC| 5.4.99.-) (rRNA-uridine isomerase B) (rRNA pseudouridylate synthase B) Length = 386 Score = 28.9 bits (63), Expect = 7.3 Identities = 19/54 (35%), Positives = 21/54 (38%), Gaps = 7/54 (12%) Frame = +2 Query: 14 PLARDSHGGA-------RPDGERGGVDGPPSGPARAGVPPGARGLRRRGNPAGQ 154 PLAR A R DGE P S PAR P R R +G P + Sbjct: 282 PLARSERPEAGRKRAPRREDGENAARRAPASRPARGPQPSAERKGREQGTPVAE 335
>M49_STRP9 (P16947) M protein, serotype 49 precursor| Length = 389 Score = 28.9 bits (63), Expect = 7.3 Identities = 27/112 (24%), Positives = 46/112 (41%), Gaps = 4/112 (3%) Frame = +3 Query: 105 FLQERGVYADEETLRGKIRLLGGTNMVDYAMDIHKSLHGTDEVPADMVARRSEVVERLRA 284 F + V A E+ + K+ + N V K L+ D++ AD+ + E +ER+ Sbjct: 33 FANQTEVKAAEKKVEAKVEV--AENNVSSVARREKELY--DQI-ADLTDKNGEYLERIGE 87 Query: 285 LQEAVAPIVAFLSSPQLVQELHADKQYNLH----MLQERHHIGPDQIEALYQ 428 L+E + Q+ + H +Q H QE +Q+E YQ Sbjct: 88 LEERQKNLEKLEHQSQVAADKHYQEQAKKHQEYKQEQEERQKNQEQLERKYQ 139
>SMCA4_HUMAN (P51532) Probable global transcription activator SNF2L4 (EC| 3.6.1.-) (ATP-dependent helicase SMARCA4) (SNF2-beta) (BRG-1 protein) (Mitotic growth and transcription activator) (Brahma protein homolog 1) (SWI/SNF-related matrix-associated actin Length = 1647 Score = 28.9 bits (63), Expect = 7.3 Identities = 17/35 (48%), Positives = 20/35 (57%) Frame = +2 Query: 41 ARPDGERGGVDGPPSGPARAGVPPGARGLRRRGNP 145 +RP G GG + PP GP+ GVPPG G G P Sbjct: 250 SRPHG-MGGPNMPPPGPS--GVPPGMPGQPPGGPP 281
>PYGO_DROME (Q9V9W8) Protein pygopus (Protein gammy legs)| Length = 815 Score = 28.9 bits (63), Expect = 7.3 Identities = 16/41 (39%), Positives = 17/41 (41%), Gaps = 3/41 (7%) Frame = +2 Query: 32 HGGARPD---GERGGVDGPPSGPARAGVPPGARGLRRRGNP 145 HG A P G GGV GP GP PP G+P Sbjct: 630 HGNAGPHMGHGHMGGVPGPGPGPGGMNGPPHPHMSPHHGHP 670
>CAC1B_MOUSE (O55017) Voltage-dependent N-type calcium channel alpha-1B subunit| (Voltage-gated calcium channel alpha subunit Cav2.2) (Calcium channel, L type, alpha-1 polypeptide isoform 5) (Brain calcium channel III) (BIII) Length = 2327 Score = 28.9 bits (63), Expect = 7.3 Identities = 15/34 (44%), Positives = 19/34 (55%) Frame = +2 Query: 35 GGARPDGERGGVDGPPSGPARAGVPPGARGLRRR 136 GG R RGG G GP + G+PPG R L ++ Sbjct: 17 GGERA---RGGGAGGAGGPGQGGLPPGQRVLYKQ 47
>DDX24_MOUSE (Q9ESV0) ATP-dependent RNA helicase DDX24 (EC 3.6.1.-) (DEAD box| protein 24) Length = 857 Score = 28.9 bits (63), Expect = 7.3 Identities = 20/42 (47%), Positives = 24/42 (57%), Gaps = 6/42 (14%) Frame = +3 Query: 3 NPSIP--SPETAMAE-HDLTASVAAWMD---PHLVLPVLEFL 110 +P +P S +T MAE HD A V+AW D P VL L FL Sbjct: 170 SPKLPKKSKKTWMAEVHDQKADVSAWRDLFVPKAVLRALSFL 211
>KIF3B_HUMAN (O15066) Kinesin-like protein KIF3B (Microtubule plus end-directed| kinesin motor 3B) (HH0048) Length = 747 Score = 28.9 bits (63), Expect = 7.3 Identities = 21/88 (23%), Positives = 37/88 (42%), Gaps = 11/88 (12%) Frame = +3 Query: 162 LLGGTNMVDYAMDIHKSLHGTDEVPADMVARRSEVVERLRALQEAVAPIVAFLSSPQLVQ 341 L+GG N+VD+ + K L + A+ R E+ +++ + E + SS Q Sbjct: 475 LVGGKNIVDHTNEQQKILEQKRQEIAEQKRREREIQQQMESRDEETLELKETYSSLQQEV 534 Query: 342 ELHADK-----------QYNLHMLQERH 392 ++ K + +H LQE H Sbjct: 535 DIKTKKLKKLFSKLQAVKAEIHDLQEEH 562
>LRP1_HHV1F (P17588) Latency-related protein 1| Length = 340 Score = 28.9 bits (63), Expect = 7.3 Identities = 18/41 (43%), Positives = 18/41 (43%) Frame = +2 Query: 29 SHGGARPDGERGGVDGPPSGPARAGVPPGARGLRRRGNPAG 151 S GG P G RGG P R G G RG RRG G Sbjct: 292 SGGGRGPGGGRGG---PRGSRGRGGRGRGGRGGGRRGRQGG 329
>CI090_MACFA (Q9BE21) Protein C9orf90 homolog| Length = 327 Score = 28.5 bits (62), Expect = 9.6 Identities = 17/57 (29%), Positives = 32/57 (56%) Frame = +3 Query: 228 EVPADMVARRSEVVERLRALQEAVAPIVAFLSSPQLVQELHADKQYNLHMLQERHHI 398 E P DM+A+ ++ + +AL+ +A L+S +L+QE + NLH+ + H+ Sbjct: 199 EAPVDMMAQHADTSVKPQALKSRIA-----LNSAKLIQE---QRVTNLHVKEIAQHL 247
>CI090_HUMAN (Q69YI7) Protein C9orf90| Length = 327 Score = 28.5 bits (62), Expect = 9.6 Identities = 17/57 (29%), Positives = 32/57 (56%) Frame = +3 Query: 228 EVPADMVARRSEVVERLRALQEAVAPIVAFLSSPQLVQELHADKQYNLHMLQERHHI 398 E P DM+A+ ++ + +AL+ +A L+S +L+QE + NLH+ + H+ Sbjct: 199 ETPVDMMAQHADTSVKPQALKSRIA-----LNSAKLIQE---QRVTNLHVKEIAQHL 247
>COL2_CAEEL (P17656) Cuticle collagen 2 precursor| Length = 301 Score = 28.5 bits (62), Expect = 9.6 Identities = 15/35 (42%), Positives = 16/35 (45%), Gaps = 8/35 (22%) Frame = +2 Query: 35 GGARPDGERG--------GVDGPPSGPARAGVPPG 115 GG P G +G G DG P GP AG P G Sbjct: 241 GGPGPAGPKGPPGAAGAPGADGNPGGPGTAGKPGG 275
>YACL_BACSU (Q06754) Hypothetical protein yacL| Length = 366 Score = 28.5 bits (62), Expect = 9.6 Identities = 18/40 (45%), Positives = 20/40 (50%), Gaps = 3/40 (7%) Frame = -2 Query: 161 ADLAPQGFLVGV---DPALLEELQHGQDQMGVHPRRHARR 51 AD+ GFL GV +LEELQH D V R RR Sbjct: 181 ADICQTGFLEGVIVIPQFVLEELQHIADSSDVLKRNRGRR 220
>PRTP_HHV11 (P10212) Processing and transport protein (Infected cell protein| 18.5) (ICP18.5 protein) Length = 785 Score = 28.5 bits (62), Expect = 9.6 Identities = 25/57 (43%), Positives = 26/57 (45%), Gaps = 11/57 (19%) Frame = +2 Query: 17 LARDSHGGARPDGERGGVDGPPSGPARAGVPPGARGL-----------RRRGNPAGQ 154 LAR GGA D +GG GP R V GARGL RRRG P GQ Sbjct: 427 LARMGAGGAA-DAPKGGA-GPDDDGDRVAVEEGARGLGAPGGGGEDEDRRRG-PGGQ 480
>YCAO_ECOLI (P75838) Hypothetical UPF0142 protein ycaO| Length = 586 Score = 28.5 bits (62), Expect = 9.6 Identities = 13/30 (43%), Positives = 19/30 (63%) Frame = +3 Query: 228 EVPADMVARRSEVVERLRALQEAVAPIVAF 317 E+PAD++AR VVE + L+ PI A+ Sbjct: 218 EIPADVLARYPAVVEAIETLEAEGFPIFAY 247
>UL61_HCMVA (P16818) Hypothetical protein UL61| Length = 431 Score = 28.5 bits (62), Expect = 9.6 Identities = 18/42 (42%), Positives = 22/42 (52%), Gaps = 3/42 (7%) Frame = +2 Query: 38 GARP---DGERGGVDGPPSGPARAGVPPGARGLRRRGNPAGQ 154 GARP DG G DGP GPA G+ G G+ R +G+ Sbjct: 321 GARPTAPDGAPGRWDGPADGPA-PGLGRGGWGVGREAGGSGR 361
>PSBS_ARATH (Q9XF91) Photosystem II 22 kDa protein, chloroplast precursor| (CP22) Length = 265 Score = 28.5 bits (62), Expect = 9.6 Identities = 16/35 (45%), Positives = 22/35 (62%), Gaps = 6/35 (17%) Frame = +2 Query: 53 GERGG-VDGPPSGPARAGVPPG-----ARGLRRRG 139 G+RG VD PP+G +A +PPG A GL+ +G Sbjct: 150 GDRGKFVDDPPTGLEKAVIPPGKNVRSALGLKEQG 184
>WDR33_HUMAN (Q9C0J8) WD-repeat protein 33 (WD-repeat protein WDC146)| Length = 1336 Score = 28.5 bits (62), Expect = 9.6 Identities = 20/52 (38%), Positives = 25/52 (48%), Gaps = 3/52 (5%) Frame = +2 Query: 5 P*HPLARDSHGGAR-PDGERG--GVDGPPSGPARAGVPPGARGLRRRGNPAG 151 P P SH G + P G +G G GPP G PPG RG++ +P G Sbjct: 707 PQGPPGPQSHIGPQGPPGPQGHLGPQGPPGTQGMQG-PPGPRGMQGPPHPHG 757 Score = 28.5 bits (62), Expect = 9.6 Identities = 16/41 (39%), Positives = 19/41 (46%), Gaps = 2/41 (4%) Frame = +2 Query: 35 GGARPDGERG--GVDGPPSGPARAGVPPGARGLRRRGNPAG 151 GG P G G G GPP G R G +G++R P G Sbjct: 645 GGGGPQGFMGPQGPQGPPQGLPRPQDMHGPQGMQRHPGPHG 685
>COCA1_CHICK (P13944) Collagen alpha-1(XII) chain precursor (Fibrochimerin)| Length = 3124 Score = 28.5 bits (62), Expect = 9.6 Identities = 18/42 (42%), Positives = 22/42 (52%), Gaps = 2/42 (4%) Frame = +2 Query: 35 GGARPDGERG--GVDGPPSGPARAGVPPGARGLRRRGNPAGQ 154 G P GERG G DGP +GP P GA G+ P+G+ Sbjct: 2837 GPVGPPGERGFTGKDGP-TGPRGPPGPAGAPGVPGVAGPSGK 2877
>RNP4_AERPE (Q9YD20) Ribonuclease P protein component 4 (EC 3.1.26.5) (RNase P| component 4) Length = 103 Score = 28.5 bits (62), Expect = 9.6 Identities = 18/49 (36%), Positives = 21/49 (42%) Frame = +2 Query: 5 P*HPLARDSHGGARPDGERGGVDGPPSGPARAGVPPGARGLRRRGNPAG 151 P P A + G R GER D P GP R G +G +G P G Sbjct: 56 PISPPAAEYGSGGRDSGERE--DKGPQGPPRQGGRDNRQGGGHQGGPKG 102
>COL7_CAEEL (P18832) Cuticle collagen 7 precursor| Length = 316 Score = 28.5 bits (62), Expect = 9.6 Identities = 17/40 (42%), Positives = 19/40 (47%), Gaps = 1/40 (2%) Frame = +2 Query: 35 GGARPDGERG-GVDGPPSGPARAGVPPGARGLRRRGNPAG 151 G G+RG G+ GP P G PPGA G GN G Sbjct: 193 GSPGKSGQRGRGLPGPSGAPGPQG-PPGAPGQPGSGNAPG 231
>CO2A1_BOVIN (P02459) Collagen alpha-1(II) chain precursor (Fragments)| Length = 747 Score = 28.5 bits (62), Expect = 9.6 Identities = 19/48 (39%), Positives = 22/48 (45%), Gaps = 10/48 (20%) Frame = +2 Query: 14 PLARDSHGGARPDGERG-----GVDGP-----PSGPARAGVPPGARGL 127 P R S G G RG G DGP P+GP A PPG +G+ Sbjct: 519 PGERGSPGAQGLQGPRGLPGTPGTDGPKGASGPAGPPGAQGPPGLQGM 566 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.316 0.131 0.485 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 49,917,152 Number of Sequences: 219361 Number of extensions: 1019019 Number of successful extensions: 6697 Number of sequences better than 10.0: 115 Number of HSP's better than 10.0 without gapping: 5317 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6565 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3246866728 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits)
