ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast78h09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY103633.1| Zea mays PCO126860 mRNA sequence 206 5e-50
2ref|NM_186621.2| Oryza sativa (japonica cultivar-group), mRNA 200 3e-48
3dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 200 3e-48
4dbj|AP005197.3| Oryza sativa (japonica cultivar-group) genomic D... 200 3e-48
5dbj|AK065461.1| Oryza sativa (japonica cultivar-group) cDNA clon... 200 3e-48
6dbj|AP003842.5| Oryza sativa (japonica cultivar-group) genomic D... 145 2e-31
7dbj|AP004267.3| Oryza sativa (japonica cultivar-group) genomic D... 145 2e-31
8dbj|AK102119.1| Oryza sativa (japonica cultivar-group) cDNA clon... 145 2e-31
9dbj|AK106535.1| Oryza sativa (japonica cultivar-group) cDNA clon... 129 9e-27
10dbj|AK065761.1| Oryza sativa (japonica cultivar-group) cDNA clon... 72 2e-09
11ref|NM_115589.3| Arabidopsis thaliana EIF3E AT3G57290 (EIF3E) mR... 70 7e-09
12gb|AY079357.1| Arabidopsis thaliana putative translation initiat... 70 7e-09
13gb|AY039913.1| Arabidopsis thaliana putative translation initiat... 70 7e-09
14emb|BX822615.1|CNS0A79V Arabidopsis thaliana Full-length cDNA Co... 70 7e-09
15emb|BX823811.1|CNS0A6J3 Arabidopsis thaliana Full-length cDNA Co... 70 7e-09
16emb|BX825198.1|CNS0A68V Arabidopsis thaliana Full-length cDNA Co... 70 7e-09
17gb|AF285832.1|AF285832 Arabidopsis thaliana eukaryotic initiatio... 70 7e-09
18gb|AF255679.1|AF255679 Arabidopsis thaliana eIF3e mRNA, complete... 70 7e-09
19ref|XM_478283.1| Oryza sativa (japonica cultivar-group), mRNA 62 2e-06
20dbj|AP005186.4| Oryza sativa (japonica cultivar-group) genomic D... 62 2e-06
21gb|BC061454.1| Danio rerio eukaryotic translation initiation fac... 48 0.027
22gb|AY648778.1| Danio rerio eukaryotic translation initiation fac... 48 0.027
23ref|NM_200839.1| Danio rerio eukaryotic translation initiation f... 48 0.027
24emb|BX294114.8| Zebrafish DNA sequence from clone DKEY-152J12 in... 48 0.027
25emb|CT033365.1| Platynereis dumerilii EST IB0AAA21DC06EM1 46 0.11
26emb|CT033203.1| Platynereis dumerilii EST IB0AAA24DG11EM1 46 0.11
27emb|CT033179.1| Platynereis dumerilii EST IB0AAA25BH06EM1 46 0.11
28emb|CT032966.1| Platynereis dumerilii EST IB0AAA28DC06EM1 46 0.11
29gb|CP000352.1| Ralstonia metallidurans CH34, complete genome 44 0.42
30ref|NM_188892.2| Oryza sativa (japonica cultivar-group), mRNA 42 1.6
31ref|XM_507204.1| PREDICTED Oryza sativa (japonica cultivar-group... 42 1.6
32gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete ge... 42 1.6
33emb|AL939114.1|SCO939114 Streptomyces coelicolor A3(2) complete ... 42 1.6
34emb|AL137080.2|ATF28O9 Arabidopsis thaliana DNA chromosome 3, BA... 42 1.6
35gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome 42 1.6
36dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
37dbj|AP003913.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
38dbj|AK073703.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.6
39dbj|AK070742.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.6
40dbj|AK067572.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.6
41dbj|AK061683.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.6
42gb|AY187619.1| Oryza sativa (indica cultivar-group) phosphoenolp... 42 1.6
43gb|AY398340.1| Danio rerio clone RK139A2H06 eukaryotic translati... 40 6.5
44ref|XM_482200.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.5
45ref|XM_482196.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.5
46ref|XM_482192.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.5
47ref|XM_478213.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.5
48gb|AY596618.1| Saccharum officinarum clone SCCCCL4009G04, comple... 40 6.5
49gb|BC057516.1| Danio rerio cDNA clone IMAGE:5602796, partial cds 40 6.5
50emb|X61489.1|ZMPHOPCAR Zea mays pep gene for (C3 type) phosphoen... 40 6.5
51emb|X59925.1|SVPEPCG S.vulgare PEPC gene for phosphoenolpyruvate... 40 6.5
52gb|DQ407907.1| Ictalurus punctatus clone SCCG01R eukaryotic tran... 40 6.5
53gb|AC156278.8| Mus musculus 6 BAC RP24-249N9 (Roswell Park Cance... 40 6.5
54ref|XM_703506.1| PREDICTED: Danio rerio similar to eukaryotic tr... 40 6.5
55ref|XM_703505.1| PREDICTED: Danio rerio similar to eukaryotic tr... 40 6.5
56ref|XM_681885.1| PREDICTED: Danio rerio similar to eukaryotic tr... 40 6.5
57gb|CP000249.1| Frankia sp. CcI3, complete genome 40 6.5
58dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.5
59emb|BX934475.1| Gallus gallus finished cDNA, clone ChEST378o7 40 6.5
60dbj|AP004259.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.5
61dbj|AP003514.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.5
62dbj|AP003956.5| Oryza sativa (japonica cultivar-group) genomic D... 40 6.5
63dbj|AP004634.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.5
64emb|BX957242.15| Zebrafish DNA sequence from clone CH211-129B17 ... 40 6.5
65gb|AC005823.1|AC005823 Homo sapiens chromosome 17, clone hRPK.10... 40 6.5 
>gb|AY103633.1| Zea mays PCO126860 mRNA sequence
          Length = 1106

 Score =  206 bits (104), Expect = 5e-50
 Identities = 251/300 (83%)
 Strand = Plus / Plus

                                                                       
Query: 152 caagatccgcctcctcggcggcaccaacatggtcgactacgccatggacatccacaagtc 211
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caagatccgcctcctcagcggcaccaacatggtcgactacgccatggacatccacaagtc 260

                                                                       
Query: 212 gctccacggcaccgacgaagtccccgccgacatggtcgcccgccgctccgaggtcgtcga 271
            |||||||||||||| || || ||||  |||||||||   ||||||||||||||||||  
Sbjct: 261 cctccacggcaccgatgacgttcccgaggacatggtcaagcgccgctccgaggtcgtctc 320

                                                                       
Query: 272 gcggctcagggccctccaggaggcggtcgcgcccatcgtcgccttcctctccagcccgca 331
             |||||||| | ||| | ||||| |  || ||  ||||||||||||||   | ||||||
Sbjct: 321 caggctcaggtcgctcgacgaggccgcagccccgctcgtcgccttcctccagaacccgca 380

                                                                       
Query: 332 gctcgtgcaggagctccacgccgacaagcagtacaacctccacatgctccaggagcgcca 391
           ||||||||||||| ||    ||||||| ||||||||| |||||||||||||||||||  |
Sbjct: 381 gctcgtgcaggagttcaggcccgacaaacagtacaacatccacatgctccaggagcgata 440

                                                                       
Query: 392 ccacatcggcccggaccagatcgaggcgctctaccagtacgccaagttccagtatgagtg 451
           ||| ||||| || |||||||| || || || || ||||| ||||| || |||| ||||||
Sbjct: 441 ccagatcggtcctgaccagattgaagctctgtatcagtatgccaaatttcagtttgagtg 500



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 75/91 (82%)
 Strand = Plus / Plus

                                                                       
Query: 28  cagccatggcggagcacgacctgacggcgagcgtggcggcgtggatggacccccatctgg 87
           ||||||||||||| |||||||| ||||||    ||||||||  | ||||||  || ||||
Sbjct: 77  cagccatggcggaccacgacctcacggcgctgatggcggcgcagctggaccggcacctgg 136

                                          
Query: 88  tcctgcccgtgctggagttcctccaggagcg 118
           || | ||  ||||||||||||||||||||||
Sbjct: 137 tcttcccgctgctggagttcctccaggagcg 167
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>ref|NM_186621.2| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1763

 Score =  200 bits (101), Expect = 3e-48
 Identities = 295/357 (82%), Gaps = 2/357 (0%)
 Strand = Plus / Plus

                                                                       
Query: 30  gccatggcggagcacgacctgacggcgagcgtggcggcgtggatggacccccatctggtc 89
           ||||||||||||||||||||||||||| |  |||||| |  |||||||  ||| ||||| 
Sbjct: 72  gccatggcggagcacgacctgacggcgcggatggcggggcagatggactgccacctggtg 131

                                                                       
Query: 90  ctgcccgtgctggagttcctccaggagcgcggggtctacgccgacgaggaaaccctgcgg 149
            | ||  ||||||||||||| |||||||| | | | |||||  || |||| | ||||  |
Sbjct: 132 ttcccgctgctggagttcctgcaggagcgtgcgctgtacgcgaacaaggagatcctggag 191

                                                                       
Query: 150 ggcaagatccgcctcctcggcggcaccaacatggtcgactacgccatggacatccacaag 209
           |  ||| ||||||||||| |||| ||||||||||| ||||||||||||||||||||||||
Sbjct: 192 gcgaagctccgcctcctcagcgggaccaacatggtggactacgccatggacatccacaag 251

                                                                       
Query: 210 tcgctccacggcaccgacgaagtccccgccgacatggtcgcccgccgctccgaggtcgtc 269
           || ||||||| ||||||||| ||||||| ||||||||||   |||||| |||| ||||||
Sbjct: 252 tccctccacgacaccgacgaggtccccgacgacatggtcaggcgccgcaccgacgtcgtc 311

                                                                       
Query: 270 gagcggctcagggccctccaggaggcggtcgcgcccatcgtcgccttcctctccagcccg 329
               |||||||||| ||| | |||||   ||| ||||||||| ||||||||   | || |
Sbjct: 312 tccaggctcagggcgctcgacgaggccaccgcccccatcgtctccttcctccagaaccag 371

                                                                    
Query: 330 cagctcgtgcaggagctccacgcc-gacaagcagtacaacctccacatgctccagga 385
           |||||||| |||||||| || ||| ||||||||||||||||||||||||||||||||
Sbjct: 372 cagctcgtccaggagct-caggccagacaagcagtacaacctccacatgctccagga 427
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score =  200 bits (101), Expect = 3e-48
 Identities = 295/357 (82%), Gaps = 2/357 (0%)
 Strand = Plus / Minus

                                                                           
Query: 30      gccatggcggagcacgacctgacggcgagcgtggcggcgtggatggacccccatctggtc 89
               ||||||||||||||||||||||||||| |  |||||| |  |||||||  ||| ||||| 
Sbjct: 6799358 gccatggcggagcacgacctgacggcgcggatggcggggcagatggactgccacctggtg 6799299

                                                                           
Query: 90      ctgcccgtgctggagttcctccaggagcgcggggtctacgccgacgaggaaaccctgcgg 149
                | ||  ||||||||||||| |||||||| | | | |||||  || |||| | ||||  |
Sbjct: 6799298 ttcccgctgctggagttcctgcaggagcgtgcgctgtacgcgaacaaggagatcctggag 6799239

                                                                           
Query: 150     ggcaagatccgcctcctcggcggcaccaacatggtcgactacgccatggacatccacaag 209
               |  ||| ||||||||||| |||| ||||||||||| ||||||||||||||||||||||||
Sbjct: 6799238 gcgaagctccgcctcctcagcgggaccaacatggtggactacgccatggacatccacaag 6799179

                                                                           
Query: 210     tcgctccacggcaccgacgaagtccccgccgacatggtcgcccgccgctccgaggtcgtc 269
               || ||||||| ||||||||| ||||||| ||||||||||   |||||| |||| ||||||
Sbjct: 6799178 tccctccacgacaccgacgaggtccccgacgacatggtcaggcgccgcaccgacgtcgtc 6799119

                                                                           
Query: 270     gagcggctcagggccctccaggaggcggtcgcgcccatcgtcgccttcctctccagcccg 329
                   |||||||||| ||| | |||||   ||| ||||||||| ||||||||   | || |
Sbjct: 6799118 tccaggctcagggcgctcgacgaggccaccgcccccatcgtctccttcctccagaaccag 6799059

                                                                        
Query: 330     cagctcgtgcaggagctccacgcc-gacaagcagtacaacctccacatgctccagga 385
               |||||||| |||||||| || ||| ||||||||||||||||||||||||||||||||
Sbjct: 6799058 cagctcgtccaggagct-caggccagacaagcagtacaacctccacatgctccagga 6799003



 Score =  145 bits (73), Expect = 2e-31
 Identities = 106/117 (90%)
 Strand = Plus / Plus

                                                                           
Query: 153     aagatccgcctcctcggcggcaccaacatggtcgactacgccatggacatccacaagtcg 212
               ||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3628100 aagatccgcctcctccggggcaccaacatggtcgactacgccatggacatccacaagtcg 3628159

                                                                        
Query: 213     ctccacggcaccgacgaagtccccgccgacatggtcgcccgccgctccgaggtcgtc 269
               | | ||||||||||||| |||||||  |||||||||   |||||| |||||||||||
Sbjct: 3628160 cgctacggcaccgacgacgtccccgaggacatggtcaagcgccgcgccgaggtcgtc 3628216



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 46/51 (90%)
 Strand = Plus / Plus

                                                                   
Query: 171      ggcaccaacatggtcgactacgccatggacatccacaagtcgctccacggc 221
                |||||||||||||| || ||||||||||||| |||||||  ||||||||||
Sbjct: 19000197 ggcaccaacatggtggattacgccatggacacccacaagctgctccacggc 19000247



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                          
Query: 30      gccatggcggagcacgacctgacggcg 56
               |||||||||||||||||||||||||||
Sbjct: 3627977 gccatggcggagcacgacctgacggcg 3628003



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                          
Query: 31       ccatggcggagcacgacctgacggcg 56
                ||||||||||||||||||||||||||
Sbjct: 19000048 ccatggcggagcacgacctgacggcg 19000073



 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 308      cgtcgccttcctctccagcc 327
                ||||||||||||||||||||
Sbjct: 18556296 cgtcgccttcctctccagcc 18556315
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>dbj|AP005197.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0592C06
          Length = 160071

 Score =  200 bits (101), Expect = 3e-48
 Identities = 295/357 (82%), Gaps = 2/357 (0%)
 Strand = Plus / Minus

                                                                         
Query: 30    gccatggcggagcacgacctgacggcgagcgtggcggcgtggatggacccccatctggtc 89
             ||||||||||||||||||||||||||| |  |||||| |  |||||||  ||| ||||| 
Sbjct: 93492 gccatggcggagcacgacctgacggcgcggatggcggggcagatggactgccacctggtg 93433

                                                                         
Query: 90    ctgcccgtgctggagttcctccaggagcgcggggtctacgccgacgaggaaaccctgcgg 149
              | ||  ||||||||||||| |||||||| | | | |||||  || |||| | ||||  |
Sbjct: 93432 ttcccgctgctggagttcctgcaggagcgtgcgctgtacgcgaacaaggagatcctggag 93373

                                                                         
Query: 150   ggcaagatccgcctcctcggcggcaccaacatggtcgactacgccatggacatccacaag 209
             |  ||| ||||||||||| |||| ||||||||||| ||||||||||||||||||||||||
Sbjct: 93372 gcgaagctccgcctcctcagcgggaccaacatggtggactacgccatggacatccacaag 93313

                                                                         
Query: 210   tcgctccacggcaccgacgaagtccccgccgacatggtcgcccgccgctccgaggtcgtc 269
             || ||||||| ||||||||| ||||||| ||||||||||   |||||| |||| ||||||
Sbjct: 93312 tccctccacgacaccgacgaggtccccgacgacatggtcaggcgccgcaccgacgtcgtc 93253

                                                                         
Query: 270   gagcggctcagggccctccaggaggcggtcgcgcccatcgtcgccttcctctccagcccg 329
                 |||||||||| ||| | |||||   ||| ||||||||| ||||||||   | || |
Sbjct: 93252 tccaggctcagggcgctcgacgaggccaccgcccccatcgtctccttcctccagaaccag 93193

                                                                      
Query: 330   cagctcgtgcaggagctccacgcc-gacaagcagtacaacctccacatgctccagga 385
             |||||||| |||||||| || ||| ||||||||||||||||||||||||||||||||
Sbjct: 93192 cagctcgtccaggagct-caggccagacaagcagtacaacctccacatgctccagga 93137
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>dbj|AK065461.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013021F09, full
           insert sequence
          Length = 1762

 Score =  200 bits (101), Expect = 3e-48
 Identities = 295/357 (82%), Gaps = 2/357 (0%)
 Strand = Plus / Plus

                                                                       
Query: 30  gccatggcggagcacgacctgacggcgagcgtggcggcgtggatggacccccatctggtc 89
           ||||||||||||||||||||||||||| |  |||||| |  |||||||  ||| ||||| 
Sbjct: 71  gccatggcggagcacgacctgacggcgcggatggcggggcagatggactgccacctggtg 130

                                                                       
Query: 90  ctgcccgtgctggagttcctccaggagcgcggggtctacgccgacgaggaaaccctgcgg 149
            | ||  ||||||||||||| |||||||| | | | |||||  || |||| | ||||  |
Sbjct: 131 ttcccgctgctggagttcctgcaggagcgtgcgctgtacgcgaacaaggagatcctggag 190

                                                                       
Query: 150 ggcaagatccgcctcctcggcggcaccaacatggtcgactacgccatggacatccacaag 209
           |  ||| ||||||||||| |||| ||||||||||| ||||||||||||||||||||||||
Sbjct: 191 gcgaagctccgcctcctcagcgggaccaacatggtggactacgccatggacatccacaag 250

                                                                       
Query: 210 tcgctccacggcaccgacgaagtccccgccgacatggtcgcccgccgctccgaggtcgtc 269
           || ||||||| ||||||||| ||||||| ||||||||||   |||||| |||| ||||||
Sbjct: 251 tccctccacgacaccgacgaggtccccgacgacatggtcaggcgccgcaccgacgtcgtc 310

                                                                       
Query: 270 gagcggctcagggccctccaggaggcggtcgcgcccatcgtcgccttcctctccagcccg 329
               |||||||||| ||| | |||||   ||| ||||||||| ||||||||   | || |
Sbjct: 311 tccaggctcagggcgctcgacgaggccaccgcccccatcgtctccttcctccagaaccag 370

                                                                    
Query: 330 cagctcgtgcaggagctccacgcc-gacaagcagtacaacctccacatgctccagga 385
           |||||||| |||||||| || ||| ||||||||||||||||||||||||||||||||
Sbjct: 371 cagctcgtccaggagct-caggccagacaagcagtacaacctccacatgctccagga 426
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>dbj|AP003842.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1641_C04
          Length = 134367

 Score =  145 bits (73), Expect = 2e-31
 Identities = 106/117 (90%)
 Strand = Plus / Plus

                                                                         
Query: 153   aagatccgcctcctcggcggcaccaacatggtcgactacgccatggacatccacaagtcg 212
             ||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 97417 aagatccgcctcctccggggcaccaacatggtcgactacgccatggacatccacaagtcg 97476

                                                                      
Query: 213   ctccacggcaccgacgaagtccccgccgacatggtcgcccgccgctccgaggtcgtc 269
             | | ||||||||||||| |||||||  |||||||||   |||||| |||||||||||
Sbjct: 97477 cgctacggcaccgacgacgtccccgaggacatggtcaagcgccgcgccgaggtcgtc 97533



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                        
Query: 30    gccatggcggagcacgacctgacggcg 56
             |||||||||||||||||||||||||||
Sbjct: 97294 gccatggcggagcacgacctgacggcg 97320
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>dbj|AP004267.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0039H02
          Length = 169162

 Score =  145 bits (73), Expect = 2e-31
 Identities = 106/117 (90%)
 Strand = Plus / Plus

                                                                          
Query: 153    aagatccgcctcctcggcggcaccaacatggtcgactacgccatggacatccacaagtcg 212
              ||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 166050 aagatccgcctcctccggggcaccaacatggtcgactacgccatggacatccacaagtcg 166109

                                                                       
Query: 213    ctccacggcaccgacgaagtccccgccgacatggtcgcccgccgctccgaggtcgtc 269
              | | ||||||||||||| |||||||  |||||||||   |||||| |||||||||||
Sbjct: 166110 cgctacggcaccgacgacgtccccgaggacatggtcaagcgccgcgccgaggtcgtc 166166



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                         
Query: 30     gccatggcggagcacgacctgacggcg 56
              |||||||||||||||||||||||||||
Sbjct: 165927 gccatggcggagcacgacctgacggcg 165953
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>dbj|AK102119.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033084M22, full
           insert sequence
          Length = 1828

 Score =  145 bits (73), Expect = 2e-31
 Identities = 106/117 (90%)
 Strand = Plus / Plus

                                                                       
Query: 153 aagatccgcctcctcggcggcaccaacatggtcgactacgccatggacatccacaagtcg 212
           ||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 aagatccgcctcctccggggcaccaacatggtcgactacgccatggacatccacaagtcg 313

                                                                    
Query: 213 ctccacggcaccgacgaagtccccgccgacatggtcgcccgccgctccgaggtcgtc 269
           | | ||||||||||||| |||||||  |||||||||   |||||| |||||||||||
Sbjct: 314 cgctacggcaccgacgacgtccccgaggacatggtcaagcgccgcgccgaggtcgtc 370



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                      
Query: 30  gccatggcggagcacgacctgacggcg 56
           |||||||||||||||||||||||||||
Sbjct: 131 gccatggcggagcacgacctgacggcg 157
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>dbj|AK106535.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-108-B06, full
           insert sequence
          Length = 1771

 Score =  129 bits (65), Expect = 9e-27
 Identities = 80/85 (94%)
 Strand = Plus / Plus

                                                                       
Query: 153 aagatccgcctcctcggcggcaccaacatggtcgactacgccatggacatccacaagtcg 212
           ||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 221 aagatccgcctcctccggggcaccaacatggtcgactacgccatggacatccacaagtcg 280

                                    
Query: 213 ctccacggcaccgacgaagtccccg 237
           | | ||||||||||||| |||||||
Sbjct: 281 cgctacggcaccgacgacgtccccg 305



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                      
Query: 30  gccatggcggagcacgacctgacggcg 56
           |||||||||||||||||||||||||||
Sbjct: 98  gccatggcggagcacgacctgacggcg 124
to top
>dbj|AK065761.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013040O19, full
            insert sequence
          Length = 2757

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 74/84 (88%), Gaps = 2/84 (2%)
 Strand = Plus / Plus

                                                                        
Query: 303  cccatcgtcgccttcctctccagcccgcagctcgtgcaggagctccacgcc-gacaagca 361
            ||||||||| ||||||||   | || ||||||||| ||||||||| | ||| ||||||||
Sbjct: 1491 cccatcgtctccttcctccagaaccagcagctcgtccaggagctc-aggccagacaagca 1549

                                    
Query: 362  gtacaacctccacatgctccagga 385
            ||||||||||||||||||||||||
Sbjct: 1550 gtacaacctccacatgctccagga 1573
to top
>ref|NM_115589.3| Arabidopsis thaliana EIF3E AT3G57290 (EIF3E) mRNA, complete cds
          Length = 1633

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 77/91 (84%)
 Strand = Plus / Plus

                                                                       
Query: 354 gacaagcagtacaacctccacatgctccaggagcgccaccacatcggcccggaccagatc 413
           |||||||||||||| ||||| |||||| |||| ||| |||| || || || |||||||| 
Sbjct: 409 gacaagcagtacaatctccaaatgctcaaggaacgctaccagattggtccagaccagatt 468

                                          
Query: 414 gaggcgctctaccagtacgccaagttccagt 444
           |||||  | ||||||||||||||||| ||||
Sbjct: 469 gaggctttgtaccagtacgccaagtttcagt 499
to top
>gb|AY079357.1| Arabidopsis thaliana putative translation initiation factor 3
           (At3g57290) mRNA, complete cds
          Length = 1357

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 77/91 (84%)
 Strand = Plus / Plus

                                                                       
Query: 354 gacaagcagtacaacctccacatgctccaggagcgccaccacatcggcccggaccagatc 413
           |||||||||||||| ||||| |||||| |||| ||| |||| || || || |||||||| 
Sbjct: 334 gacaagcagtacaatctccaaatgctcaaggaacgctaccagattggtccagaccagatt 393

                                          
Query: 414 gaggcgctctaccagtacgccaagttccagt 444
           |||||  | ||||||||||||||||| ||||
Sbjct: 394 gaggctttgtaccagtacgccaagtttcagt 424
to top
>gb|AY039913.1| Arabidopsis thaliana putative translation initiation factor 3
           (At3g57290) mRNA, complete cds
          Length = 1570

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 77/91 (84%)
 Strand = Plus / Plus

                                                                       
Query: 354 gacaagcagtacaacctccacatgctccaggagcgccaccacatcggcccggaccagatc 413
           |||||||||||||| ||||| |||||| |||| ||| |||| || || || |||||||| 
Sbjct: 399 gacaagcagtacaatctccaaatgctcaaggaacgctaccagattggtccagaccagatt 458

                                          
Query: 414 gaggcgctctaccagtacgccaagttccagt 444
           |||||  | ||||||||||||||||| ||||
Sbjct: 459 gaggctttgtaccagtacgccaagtttcagt 489
to top
>emb|BX822615.1|CNS0A79V Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB52ZF12 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1527

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 77/91 (84%)
 Strand = Plus / Plus

                                                                       
Query: 354 gacaagcagtacaacctccacatgctccaggagcgccaccacatcggcccggaccagatc 413
           |||||||||||||| ||||| |||||| |||| ||| |||| || || || |||||||| 
Sbjct: 408 gacaagcagtacaatctccaaatgctcaaggaacgctaccagattggtccagaccagatt 467

                                          
Query: 414 gaggcgctctaccagtacgccaagttccagt 444
           |||||  | ||||||||||||||||| ||||
Sbjct: 468 gaggctttgtaccagtacgccaagtttcagt 498
to top
>emb|BX823811.1|CNS0A6J3 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS78ZE06 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1563

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 77/91 (84%)
 Strand = Plus / Plus

                                                                       
Query: 354 gacaagcagtacaacctccacatgctccaggagcgccaccacatcggcccggaccagatc 413
           |||||||||||||| ||||| |||||| |||| ||| |||| || || || |||||||| 
Sbjct: 391 gacaagcagtacaatctccaaatgctcaaggaacgctaccagattggtccagaccagatt 450

                                          
Query: 414 gaggcgctctaccagtacgccaagttccagt 444
           |||||  | ||||||||||||||||| ||||
Sbjct: 451 gaggctttgtaccagtacgccaagtttcagt 481
to top
>emb|BX825198.1|CNS0A68V Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL1ZC08 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 1493

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 77/91 (84%)
 Strand = Plus / Plus

                                                                       
Query: 354 gacaagcagtacaacctccacatgctccaggagcgccaccacatcggcccggaccagatc 413
           |||||||||||||| ||||| |||||| |||| ||| |||| || || || |||||||| 
Sbjct: 370 gacaagcagtacaatctccaaatgctcaaggaacgctaccagattggtccagaccagatt 429

                                          
Query: 414 gaggcgctctaccagtacgccaagttccagt 444
           |||||  | ||||||||||||||||| ||||
Sbjct: 430 gaggctttgtaccagtacgccaagtttcagt 460
to top
>gb|AF285832.1|AF285832 Arabidopsis thaliana eukaryotic initiation factor 3E subunit
           (TIF3E1) mRNA, complete cds
          Length = 1591

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 77/91 (84%)
 Strand = Plus / Plus

                                                                       
Query: 354 gacaagcagtacaacctccacatgctccaggagcgccaccacatcggcccggaccagatc 413
           |||||||||||||| ||||| |||||| |||| ||| |||| || || || |||||||| 
Sbjct: 397 gacaagcagtacaatctccaaatgctcaaggaacgctaccagattggtccagaccagatt 456

                                          
Query: 414 gaggcgctctaccagtacgccaagttccagt 444
           |||||  | ||||||||||||||||| ||||
Sbjct: 457 gaggctttgtaccagtacgccaagtttcagt 487
to top
>gb|AF255679.1|AF255679 Arabidopsis thaliana eIF3e mRNA, complete cds
          Length = 1590

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 77/91 (84%)
 Strand = Plus / Plus

                                                                       
Query: 354 gacaagcagtacaacctccacatgctccaggagcgccaccacatcggcccggaccagatc 413
           |||||||||||||| ||||| |||||| |||| ||| |||| || || || |||||||| 
Sbjct: 397 gacaagcagtacaatctccaaatgctcaaggaacgctaccagattggtccagaccagatt 456

                                          
Query: 414 gaggcgctctaccagtacgccaagttccagt 444
           |||||  | ||||||||||||||||| ||||
Sbjct: 457 gaggctttgtaccagtacgccaagtttcagt 487
to top
>ref|XM_478283.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1311

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 46/51 (90%)
 Strand = Plus / Plus

                                                              
Query: 171 ggcaccaacatggtcgactacgccatggacatccacaagtcgctccacggc 221
           |||||||||||||| || ||||||||||||| |||||||  ||||||||||
Sbjct: 148 ggcaccaacatggtggattacgccatggacacccacaagctgctccacggc 198



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 76/93 (81%)
 Strand = Plus / Plus

                                                                       
Query: 352 ccgacaagcagtacaacctccacatgctccaggagcgccaccacatcggcccggaccaga 411
           |||||||| || ||||| ||| ||||||||| ||||||  ||| || || || || ||||
Sbjct: 335 ccgacaaggagcacaacatccgcatgctccatgagcgcttccagattggtcctgatcaga 394

                                            
Query: 412 tcgaggcgctctaccagtacgccaagttccagt 444
           ||||||| || || ||||| |||||||| ||||
Sbjct: 395 tcgaggctctgtatcagtatgccaagtttcagt 427



 Score = 48.1 bits (24), Expect = 0.027
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 33 atggcggagcacgacctgacggcg 56
          ||||||||||||||||||||||||
Sbjct: 1  atggcggagcacgacctgacggcg 24
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>dbj|AP005186.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0430F03
          Length = 183095

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 46/51 (90%)
 Strand = Plus / Plus

                                                                 
Query: 171    ggcaccaacatggtcgactacgccatggacatccacaagtcgctccacggc 221
              |||||||||||||| || ||||||||||||| |||||||  ||||||||||
Sbjct: 102182 ggcaccaacatggtggattacgccatggacacccacaagctgctccacggc 102232



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                        
Query: 31     ccatggcggagcacgacctgacggcg 56
              ||||||||||||||||||||||||||
Sbjct: 102033 ccatggcggagcacgacctgacggcg 102058
to top
>gb|BC061454.1| Danio rerio eukaryotic translation initiation factor 3, subunit 6,
           mRNA (cDNA clone MGC:63821 IMAGE:3815994), complete cds
          Length = 1521

 Score = 48.1 bits (24), Expect = 0.027
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                       
Query: 429 tacgccaagttccagtatgagtgcggga 456
           ||||||||||||||||||||||| ||||
Sbjct: 419 tacgccaagttccagtatgagtgtggga 446
to top
>gb|AY648778.1| Danio rerio eukaryotic translation initiation factor 3 subunit 6
           mRNA, complete cds
          Length = 1508

 Score = 48.1 bits (24), Expect = 0.027
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                       
Query: 429 tacgccaagttccagtatgagtgcggga 456
           ||||||||||||||||||||||| ||||
Sbjct: 418 tacgccaagttccagtatgagtgtggga 445
to top
>ref|NM_200839.1| Danio rerio eukaryotic translation initiation factor 3, subunit 6
           (eif3s6), mRNA
          Length = 1521

 Score = 48.1 bits (24), Expect = 0.027
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                       
Query: 429 tacgccaagttccagtatgagtgcggga 456
           ||||||||||||||||||||||| ||||
Sbjct: 419 tacgccaagttccagtatgagtgtggga 446
to top
>emb|BX294114.8| Zebrafish DNA sequence from clone DKEY-152J12 in linkage group 1,
             complete sequence
          Length = 195651

 Score = 48.1 bits (24), Expect = 0.027
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                         
Query: 429   tacgccaagttccagtatgagtgcggga 456
             ||||||||||||||||||||||| ||||
Sbjct: 70747 tacgccaagttccagtatgagtgtggga 70720
to top
>emb|CT033365.1| Platynereis dumerilii EST IB0AAA21DC06EM1
          Length = 909

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 429 tacgccaagttccagtatgagtg 451
           |||||||||||||||||||||||
Sbjct: 423 tacgccaagttccagtatgagtg 445
to top
>emb|CT033203.1| Platynereis dumerilii EST IB0AAA24DG11EM1
          Length = 888

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 429 tacgccaagttccagtatgagtg 451
           |||||||||||||||||||||||
Sbjct: 422 tacgccaagttccagtatgagtg 444
to top
>emb|CT033179.1| Platynereis dumerilii EST IB0AAA25BH06EM1
          Length = 925

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 429 tacgccaagttccagtatgagtg 451
           |||||||||||||||||||||||
Sbjct: 417 tacgccaagttccagtatgagtg 439
to top
>emb|CT032966.1| Platynereis dumerilii EST IB0AAA28DC06EM1
          Length = 869

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 429 tacgccaagttccagtatgagtg 451
           |||||||||||||||||||||||
Sbjct: 404 tacgccaagttccagtatgagtg 426
to top
>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome
          Length = 3928089

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 89      cctgcccgtgctggagttcctc 110
               ||||||||||||||||||||||
Sbjct: 1539779 cctgcccgtgctggagttcctc 1539800
to top
>ref|NM_188892.2| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3158

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 366  aacctccacatgctccaggag 386
            |||||||||||||||||||||
Sbjct: 2456 aacctccacatgctccaggag 2476
to top
>ref|XM_507204.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1484_G09.129-1
            mRNA
          Length = 3539

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 366  aacctccacatgctccaggag 386
            |||||||||||||||||||||
Sbjct: 2721 aacctccacatgctccaggag 2741
to top
>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome
          Length = 3696649

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 221     caccgacgaagtccccgccga 241
               |||||||||||||||||||||
Sbjct: 3193322 caccgacgaagtccccgccga 3193342
to top
>emb|AL939114.1|SCO939114 Streptomyces coelicolor A3(2) complete genome; segment 11/29
          Length = 313800

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 330   cagctcgtgcaggagctccacgccg 354
             |||| ||||||||||||||||||||
Sbjct: 81756 cagcgcgtgcaggagctccacgccg 81780
to top
>emb|AL137080.2|ATF28O9 Arabidopsis thaliana DNA chromosome 3, BAC clone F28O9
          Length = 85710

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                      
Query: 354   gacaagcagtacaacctccacatgctccaggagcgccacca 394
             |||||||||||||| ||||| |||||| |||| ||| ||||
Sbjct: 38098 gacaagcagtacaatctccaaatgctcaaggaacgctacca 38058



 Score = 40.1 bits (20), Expect = 6.5
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                     
Query: 405   gaccagatcgaggcgctctaccagtacgccaagttccagt 444
             |||||||| |||||  | ||||||||||||||||| ||||
Sbjct: 37939 gaccagattgaggctttgtaccagtacgccaagtttcagt 37900
to top
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome
          Length = 7074893

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 142     ccctgcggggcaagatccgcc 162
               |||||||||||||||||||||
Sbjct: 2276434 ccctgcggggcaagatccgcc 2276414
to top
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 366      aacctccacatgctccaggag 386
                |||||||||||||||||||||
Sbjct: 16958412 aacctccacatgctccaggag 16958392



 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 296      ggtcgcgcccatcgtcgcct 315
                ||||||||||||||||||||
Sbjct: 18562356 ggtcgcgcccatcgtcgcct 18562375



 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 296      ggtcgcgcccatcgtcgcct 315
                ||||||||||||||||||||
Sbjct: 18535660 ggtcgcgcccatcgtcgcct 18535679



 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 296      ggtcgcgcccatcgtcgcct 315
                ||||||||||||||||||||
Sbjct: 18502202 ggtcgcgcccatcgtcgcct 18502221
to top
>dbj|AP003913.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OJ1484_G09
          Length = 124695

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 366    aacctccacatgctccaggag 386
              |||||||||||||||||||||
Sbjct: 105423 aacctccacatgctccaggag 105403
to top
>dbj|AK073703.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033055B18, full
            insert sequence
          Length = 3538

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 366  aacctccacatgctccaggag 386
            |||||||||||||||||||||
Sbjct: 2720 aacctccacatgctccaggag 2740
to top
>dbj|AK070742.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023061C12, full
            insert sequence
          Length = 4317

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 366  aacctccacatgctccaggag 386
            |||||||||||||||||||||
Sbjct: 3622 aacctccacatgctccaggag 3642
to top
>dbj|AK067572.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013108G24, full
            insert sequence
          Length = 3158

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 366  aacctccacatgctccaggag 386
            |||||||||||||||||||||
Sbjct: 2456 aacctccacatgctccaggag 2476
to top
>dbj|AK061683.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-037-A07, full
            insert sequence
          Length = 1704

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 366  aacctccacatgctccaggag 386
            |||||||||||||||||||||
Sbjct: 1014 aacctccacatgctccaggag 1034
to top
>gb|AY187619.1| Oryza sativa (indica cultivar-group) phosphoenolpyruvate carboxylase
            (PEPC) mRNA, complete cds
          Length = 2981

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 366  aacctccacatgctccaggag 386
            |||||||||||||||||||||
Sbjct: 2462 aacctccacatgctccaggag 2482
to top
>gb|AY398340.1| Danio rerio clone RK139A2H06 eukaryotic translation initiation
           factor 3, subunit 6 48kDa (EIF3S6) mRNA, complete cds
          Length = 1514

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 429 tacgccaagttccagtatga 448
           ||||||||||||||||||||
Sbjct: 404 tacgccaagttccagtatga 423
to top
>ref|XM_482200.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1131

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 296 ggtcgcgcccatcgtcgcct 315
           ||||||||||||||||||||
Sbjct: 687 ggtcgcgcccatcgtcgcct 668
to top
>ref|XM_482196.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1146

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 296 ggtcgcgcccatcgtcgcct 315
           ||||||||||||||||||||
Sbjct: 705 ggtcgcgcccatcgtcgcct 686
to top
>ref|XM_482192.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1125

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 296 ggtcgcgcccatcgtcgcct 315
           ||||||||||||||||||||
Sbjct: 687 ggtcgcgcccatcgtcgcct 668
to top
>ref|XM_478213.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 585

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 308 cgtcgccttcctctccagcc 327
           ||||||||||||||||||||
Sbjct: 414 cgtcgccttcctctccagcc 433
to top
>gb|AY596618.1| Saccharum officinarum clone SCCCCL4009G04, complete sequence
          Length = 811

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 48  ctgacggcgagcgtggcggc 67
           ||||||||||||||||||||
Sbjct: 151 ctgacggcgagcgtggcggc 132
to top
>gb|BC057516.1| Danio rerio cDNA clone IMAGE:5602796, partial cds
          Length = 1942

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 432 gccaagttccagtatgagtg 451
           ||||||||||||||||||||
Sbjct: 415 gccaagttccagtatgagtg 434
to top
>emb|X61489.1|ZMPHOPCAR Zea mays pep gene for (C3 type) phosphoenolpyruvate carboxylase
          Length = 3213

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 366  aacctccacatgctccagga 385
            ||||||||||||||||||||
Sbjct: 2510 aacctccacatgctccagga 2529
to top
>emb|X59925.1|SVPEPCG S.vulgare PEPC gene for phosphoenolpyruvate carboxylase
          Length = 6018

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 366  aacctccacatgctccagga 385
            ||||||||||||||||||||
Sbjct: 5101 aacctccacatgctccagga 5120
to top
>gb|DQ407907.1| Ictalurus punctatus clone SCCG01R eukaryotic translation initiation
           factor 3 subunit 6 48kDa mRNA, partial cds
          Length = 406

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 173 caccaacatggtcgactacgccatggac 200
           |||||||||||| |||| ||||||||||
Sbjct: 129 caccaacatggtggacttcgccatggac 156
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>gb|AC156278.8| Mus musculus 6 BAC RP24-249N9 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 162919

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 312    gccttcctctccagcccgcagctc 335
              ||||||||||||||||| ||||||
Sbjct: 159508 gccttcctctccagccctcagctc 159485
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>ref|XM_703506.1| PREDICTED: Danio rerio similar to eukaryotic translation initiation
           factor 3, subunit 6, transcript variant 4 (LOC561049),
           mRNA
          Length = 1917

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 432 gccaagttccagtatgagtg 451
           ||||||||||||||||||||
Sbjct: 422 gccaagttccagtatgagtg 441
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>ref|XM_703505.1| PREDICTED: Danio rerio similar to eukaryotic translation initiation
           factor 3, subunit 6, transcript variant 3 (LOC561049),
           mRNA
          Length = 1606

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 432 gccaagttccagtatgagtg 451
           ||||||||||||||||||||
Sbjct: 418 gccaagttccagtatgagtg 437
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>ref|XM_681885.1| PREDICTED: Danio rerio similar to eukaryotic translation initiation
           factor 3, subunit 6, transcript variant 1 (LOC561049),
           mRNA
          Length = 1682

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 432 gccaagttccagtatgagtg 451
           ||||||||||||||||||||
Sbjct: 422 gccaagttccagtatgagtg 441
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>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 233     ccccgccgacatggtcgccc 252
               ||||||||||||||||||||
Sbjct: 5331802 ccccgccgacatggtcgccc 5331821
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 53      ggcgagcgtggcggcgtgga 72
               ||||||||||||||||||||
Sbjct: 4711830 ggcgagcgtggcggcgtgga 4711811
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>emb|BX934475.1| Gallus gallus finished cDNA, clone ChEST378o7
          Length = 1099

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 92  gcccgtgctggagttcctccagga 115
           ||||||||||||||||||| ||||
Sbjct: 756 gcccgtgctggagttcctcaagga 779
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>dbj|AP004259.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
            clone:P0005E02
          Length = 89380

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 308  cgtcgccttcctctccagcc 327
            ||||||||||||||||||||
Sbjct: 8838 cgtcgccttcctctccagcc 8857
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>dbj|AP003514.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0698A06
          Length = 156514

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 53    ggcgagcgtggcggcgtgga 72
             ||||||||||||||||||||
Sbjct: 74429 ggcgagcgtggcggcgtgga 74410
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>dbj|AP003956.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1457_D07
          Length = 103688

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 308   cgtcgccttcctctccagcc 327
             ||||||||||||||||||||
Sbjct: 85052 cgtcgccttcctctccagcc 85071
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>dbj|AP004634.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0671F11
          Length = 159409

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 296    ggtcgcgcccatcgtcgcct 315
              ||||||||||||||||||||
Sbjct: 144379 ggtcgcgcccatcgtcgcct 144398



 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 296    ggtcgcgcccatcgtcgcct 315
              ||||||||||||||||||||
Sbjct: 117683 ggtcgcgcccatcgtcgcct 117702



 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 296   ggtcgcgcccatcgtcgcct 315
             ||||||||||||||||||||
Sbjct: 84225 ggtcgcgcccatcgtcgcct 84244
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>emb|BX957242.15| Zebrafish DNA sequence from clone CH211-129B17 in linkage group 19,
              complete sequence
          Length = 167629

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 432    gccaagttccagtatgagtg 451
              ||||||||||||||||||||
Sbjct: 143112 gccaagttccagtatgagtg 143093
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>gb|AC005823.1|AC005823 Homo sapiens chromosome 17, clone hRPK.1018_N_14, complete sequence
          Length = 185116

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 315    ttcctctccagcccgcagct 334
              ||||||||||||||||||||
Sbjct: 138350 ttcctctccagcccgcagct 138331


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,236,341
Number of Sequences: 3902068
Number of extensions: 3236341
Number of successful extensions: 80040
Number of sequences better than 10.0: 65
Number of HSP's better than 10.0 without gapping: 67
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 79486
Number of HSP's gapped (non-prelim): 549
length of query: 480
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 458
effective length of database: 17,147,199,772
effective search space: 7853417495576
effective search space used: 7853417495576
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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