| Clone Name | bast78h06 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK073262.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033026H23, full insert sequence Length = 1655 Score = 264 bits (133), Expect = 2e-67 Identities = 274/321 (85%) Strand = Plus / Plus Query: 164 ggaggggatggcctgtacagggagattctcagggacgagacggtcctccggctcaaccaa 223 ||||| ||||| || ||||||||||| |||||||| |||||||| ||| ||||||| || Sbjct: 167 ggaggagatgggctctacagggagatcctcagggatgagacggtgctcaggctcaaagaa 226 Query: 224 ctcggcaagatatctgatggcgaagggttcctcgaaaggacgttcctgagtcctgcttcc 283 || ||||||||||||||||| ||||| | ||| || ||||| || |||||||||| || Sbjct: 227 cttggcaagatatctgatggggaaggttaccttgagaggacatttttgagtcctgcctca 286 Query: 284 ttcagagccactgatgtcattatcggctggatgaaagatgccggacttacgacgtgggtt 343 |||||||| ||| |||||||||| ||||||||||||||||||||||||| |||||| || Sbjct: 287 atcagagcctctgctgtcattatcagctggatgaaagatgccggacttaccacgtggatt 346 Query: 344 gatcaaatgggtaacattcatggccgatttgaaccgtccaattcgacagagaaggcttta 403 ||||||||||| || |||||||| |||||||||||| |||| || || || |||| || Sbjct: 347 gatcaaatggggaatattcatggtcgatttgaaccgaccaactcaaccaaggaggccttg 406 Query: 404 ttgattggatcccatatggatactgtcattgatgctggcatgtacgacggagccttgggt 463 ||||| ||||| || ||||| ||||| ||||||||||||||||| |||||||| |||||| Sbjct: 407 ttgatcggatctcacatggacactgttattgatgctggcatgtatgacggagctttgggt 466 Query: 464 attatatgcgcaatctctgct 484 ||||| | |||||||||||| Sbjct: 467 attatctctgcaatctctgct 487
>gb|AY104710.1| Zea mays PCO117022 mRNA sequence Length = 1699 Score = 194 bits (98), Expect = 2e-46 Identities = 247/294 (84%), Gaps = 2/294 (0%) Strand = Plus / Plus Query: 176 ctgtacagggagattctcagggacgagacggtcctccggctcaaccaactcggcaagata 235 |||||| |||||||||||||||||||||| || | ||||||| | || ||||||||| Sbjct: 194 ctgtaccgggagattctcagggacgagaccgtgcagaggctcaaggagctgggcaagata 253 Query: 236 tctgatggcgaagggttcctcgaaaggacgttcctgagtcctgcttccttcagagccact 295 |||||||| || || | ||| ||||||||||| |||||||| || || ||||||||||| Sbjct: 254 tctgatggggatggctaccttgaaaggacgtttctgagtccggcctctatcagagccact 313 Query: 296 gatgtcattatcggctggatgaaagatgccggacttacgacgtgggttgatcaaatgggt 355 | |||||| || ||||||||||||| || || |||||||||||||| ||||| ||||| Sbjct: 314 ggtgtcatcgtcagctggatgaaagacgctgggcttacgacgtgggtcgatcagatgggg 373 Query: 356 aacattcatggccgatttgaaccgtccaattcga-cagagaaggctttattgattggatc 414 || |||||||| |||| ||| ||| | ||||| | ||||| | || || ||||||||||| Sbjct: 374 aatattcatggtcgatatgagccggcaaattctaccagag-atgccttgttgattggatc 432 Query: 415 ccatatggatactgtcattgatgctggcatgtacgacggagccttgggtattat 468 |||||||| |||||| |||||||||| |||||||| ||||||||||||||||| Sbjct: 433 tcatatggacactgtcgttgatgctgggatgtacgatggagccttgggtattat 486
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 95.6 bits (48), Expect = 1e-16 Identities = 93/108 (86%) Strand = Plus / Minus Query: 231 agatatctgatggcgaagggttcctcgaaaggacgttcctgagtcctgcttccttcagag 290 ||||||||||||| ||||| | ||| || ||||| || |||||||||| || |||||| Sbjct: 27114798 agatatctgatggggaaggttaccttgagaggacatttttgagtcctgcctcaatcagag 27114739 Query: 291 ccactgatgtcattatcggctggatgaaagatgccggacttacgacgt 338 || ||| |||||||||| ||||||||||||||||||||||||| |||| Sbjct: 27114738 cctctgctgtcattatcagctggatgaaagatgccggacttaccacgt 27114691 Score = 71.9 bits (36), Expect = 2e-09 Identities = 54/60 (90%) Strand = Plus / Minus Query: 425 actgtcattgatgctggcatgtacgacggagccttgggtattatatgcgcaatctctgct 484 ||||| ||||||||||||||||| |||||||| ||||||||||| | |||||||||||| Sbjct: 27114421 actgttattgatgctggcatgtatgacggagctttgggtattatctctgcaatctctgct 27114362 Score = 58.0 bits (29), Expect = 3e-05 Identities = 59/69 (85%) Strand = Plus / Minus Query: 164 ggaggggatggcctgtacagggagattctcagggacgagacggtcctccggctcaaccaa 223 ||||| ||||| || ||||||||||| |||||||| |||||||| ||| ||||||| || Sbjct: 27115598 ggaggagatgggctctacagggagatcctcagggatgagacggtgctcaggctcaaagaa 27115539 Query: 224 ctcggcaag 232 || |||||| Sbjct: 27115538 cttggcaag 27115530 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Minus Query: 337 gtgggttgatcaaatgggtaacattcatggccgatttgaaccgtccaa 384 |||| ||||||||||||| || |||||||| |||||||||||| |||| Sbjct: 27114610 gtggattgatcaaatggggaatattcatggtcgatttgaaccgaccaa 27114563 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 73 cgtcgccgtcctcatcctcctcctc 97 ||||||||||||| ||||||||||| Sbjct: 4711401 cgtcgccgtcctcctcctcctcctc 4711425 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 83 ctcatcctcctcctctccggcgtc 106 |||||||||||| ||||||||||| Sbjct: 10314819 ctcatcctcctcgtctccggcgtc 10314796 Score = 40.1 bits (20), Expect = 6.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 73 cgtcgccgtcctcatcctcctcctctccggcg 104 ||||| |||| ||||||||||| ||||||||| Sbjct: 925155 cgtcgacgtcatcatcctcctcttctccggcg 925186
>dbj|AP003628.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0473H04 Length = 155204 Score = 95.6 bits (48), Expect = 1e-16 Identities = 93/108 (86%) Strand = Plus / Minus Query: 231 agatatctgatggcgaagggttcctcgaaaggacgttcctgagtcctgcttccttcagag 290 ||||||||||||| ||||| | ||| || ||||| || |||||||||| || |||||| Sbjct: 83608 agatatctgatggggaaggttaccttgagaggacatttttgagtcctgcctcaatcagag 83549 Query: 291 ccactgatgtcattatcggctggatgaaagatgccggacttacgacgt 338 || ||| |||||||||| ||||||||||||||||||||||||| |||| Sbjct: 83548 cctctgctgtcattatcagctggatgaaagatgccggacttaccacgt 83501 Score = 71.9 bits (36), Expect = 2e-09 Identities = 54/60 (90%) Strand = Plus / Minus Query: 425 actgtcattgatgctggcatgtacgacggagccttgggtattatatgcgcaatctctgct 484 ||||| ||||||||||||||||| |||||||| ||||||||||| | |||||||||||| Sbjct: 83231 actgttattgatgctggcatgtatgacggagctttgggtattatctctgcaatctctgct 83172 Score = 58.0 bits (29), Expect = 3e-05 Identities = 59/69 (85%) Strand = Plus / Minus Query: 164 ggaggggatggcctgtacagggagattctcagggacgagacggtcctccggctcaaccaa 223 ||||| ||||| || ||||||||||| |||||||| |||||||| ||| ||||||| || Sbjct: 84408 ggaggagatgggctctacagggagatcctcagggatgagacggtgctcaggctcaaagaa 84349 Query: 224 ctcggcaag 232 || |||||| Sbjct: 84348 cttggcaag 84340 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Minus Query: 337 gtgggttgatcaaatgggtaacattcatggccgatttgaaccgtccaa 384 |||| ||||||||||||| || |||||||| |||||||||||| |||| Sbjct: 83420 gtggattgatcaaatggggaatattcatggtcgatttgaaccgaccaa 83373
>gb|AE017346.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 6, complete sequence Length = 1438950 Score = 48.1 bits (24), Expect = 0.027 Identities = 24/24 (100%) Strand = Plus / Plus Query: 81 tcctcatcctcctcctctccggcg 104 |||||||||||||||||||||||| Sbjct: 45495 tcctcatcctcctcctctccggcg 45518
>ref|XM_571658.1| Cryptococcus neoformans var. neoformans JEC21 mitochondrion protein (CNF00150) partial mRNA Length = 976 Score = 48.1 bits (24), Expect = 0.027 Identities = 24/24 (100%) Strand = Plus / Plus Query: 81 tcctcatcctcctcctctccggcg 104 |||||||||||||||||||||||| Sbjct: 143 tcctcatcctcctcctctccggcg 166
>ref|NM_118126.2| Arabidopsis thaliana metallopeptidase AT4G20070 mRNA, complete cds Length = 1837 Score = 46.1 bits (23), Expect = 0.11 Identities = 32/35 (91%) Strand = Plus / Plus Query: 407 attggatcccatatggatactgtcattgatgctgg 441 ||||| ||||||||||| ||||| ||||||||||| Sbjct: 583 attggttcccatatggacactgtgattgatgctgg 617
>ref|XM_464399.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1134 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 78 ccgtcctcatcctcctcctctccggcg 104 |||||||| |||||||||||||||||| Sbjct: 50 ccgtcctcctcctcctcctctccggcg 76
>gb|BT025334.1| Arabidopsis thaliana At4g20070 mRNA, complete cds Length = 1578 Score = 46.1 bits (23), Expect = 0.11 Identities = 32/35 (91%) Strand = Plus / Plus Query: 407 attggatcccatatggatactgtcattgatgctgg 441 ||||| ||||||||||| ||||| ||||||||||| Sbjct: 490 attggttcccatatggacactgtgattgatgctgg 524
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 90 tcctcctctccggcgtcccggcc 112 ||||||||||||||||||||||| Sbjct: 17606857 tcctcctctccggcgtcccggcc 17606835 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 63 cgcgcccctccgtcgccgtcc 83 ||||||||||||||||||||| Sbjct: 21379606 cgcgcccctccgtcgccgtcc 21379586
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 78 ccgtcctcatcctcctcctctccggcg 104 |||||||| |||||||||||||||||| Sbjct: 4942821 ccgtcctcctcctcctcctctccggcg 4942847
>emb|BX828231.1|CNS0A335 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH66ZB01 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1771 Score = 46.1 bits (23), Expect = 0.11 Identities = 32/35 (91%) Strand = Plus / Plus Query: 407 attggatcccatatggatactgtcattgatgctgg 441 ||||| ||||||||||| ||||| ||||||||||| Sbjct: 563 attggttcccatatggacactgtgattgatgctgg 597
>dbj|AP005849.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0031B09 Length = 132729 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 78 ccgtcctcatcctcctcctctccggcg 104 |||||||| |||||||||||||||||| Sbjct: 13947 ccgtcctcctcctcctcctctccggcg 13973
>dbj|AP004046.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1145_F01 Length = 113755 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 78 ccgtcctcatcctcctcctctccggcg 104 |||||||| |||||||||||||||||| Sbjct: 87560 ccgtcctcctcctcctcctctccggcg 87586
>dbj|AK109886.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-149-D12, full insert sequence Length = 2459 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 90 tcctcctctccggcgtcccggcc 112 ||||||||||||||||||||||| Sbjct: 24 tcctcctctccggcgtcccggcc 46
>dbj|AK108567.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-145-C12, full insert sequence Length = 1426 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 78 ccgtcctcatcctcctcctctccggcg 104 |||||||| |||||||||||||||||| Sbjct: 63 ccgtcctcctcctcctcctctccggcg 89
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 90 tcctcctctccggcgtcccggcc 112 ||||||||||||||||||||||| Sbjct: 17561228 tcctcctctccggcgtcccggcc 17561206 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 63 cgcgcccctccgtcgccgtcc 83 ||||||||||||||||||||| Sbjct: 21305825 cgcgcccctccgtcgccgtcc 21305805
>emb|AL935066.2|CNS08CCI Oryza sativa chromosome 12, . BAC OSJNBa0005P03 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 162200 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 90 tcctcctctccggcgtcccggcc 112 ||||||||||||||||||||||| Sbjct: 99193 tcctcctctccggcgtcccggcc 99171
>ref|NM_183841.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1428 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Plus Query: 75 tcgccgtcctcatcctcctcctctcc 100 ||||||||||| |||||||||||||| Sbjct: 38 tcgccgtcctcctcctcctcctctcc 63
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Minus Query: 75 tcgccgtcctcatcctcctcctctcc 100 ||||||||||| |||||||||||||| Sbjct: 12655524 tcgccgtcctcctcctcctcctctcc 12655499 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 81 tcctcatcctcctcctctccggcg 104 ||||| |||||||||||||||||| Sbjct: 22613965 tcctcctcctcctcctctccggcg 22613942
>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome Length = 1849742 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Minus Query: 76 cgccgtcctcatcctcctcctctccg 101 ||||||||||||||||||| |||||| Sbjct: 920418 cgccgtcctcatcctcctcgtctccg 920393
>dbj|AP002869.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0554D10 Length = 158723 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Minus Query: 75 tcgccgtcctcatcctcctcctctcc 100 ||||||||||| |||||||||||||| Sbjct: 22553 tcgccgtcctcctcctcctcctctcc 22528
>dbj|AK101169.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033028K02, full insert sequence Length = 2095 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Plus Query: 75 tcgccgtcctcatcctcctcctctcc 100 ||||||||||| |||||||||||||| Sbjct: 96 tcgccgtcctcctcctcctcctctcc 121
>gb|AE017221.1| Thermus thermophilus HB27, complete genome Length = 1894877 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Minus Query: 76 cgccgtcctcatcctcctcctctccg 101 ||||||||||||||||||| |||||| Sbjct: 595115 cgccgtcctcatcctcctcgtctccg 595090
>ref|XM_511642.1| PREDICTED: Pan troglodytes LOC454839 (LOC454839), mRNA Length = 3491 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 73 cgtcgccgtcctcatcctcctcctc 97 ||||||||||||| ||||||||||| Sbjct: 75 cgtcgccgtcctcctcctcctcctc 51
>ref|XM_471145.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 897 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 79 cgtcctcatcctcctcctctccggc 103 ||||||| ||||||||||||||||| Sbjct: 67 cgtcctcctcctcctcctctccggc 43
>gb|AC108873.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1005_B11, complete sequence Length = 162772 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 73 cgtcgccgtcctcatcctcctcctc 97 ||||||||||||| ||||||||||| Sbjct: 16817 cgtcgccgtcctcctcctcctcctc 16841
>gb|AY596304.1| Chlamydomonas reinhardtii unknown (mtA4) mRNA, complete cds Length = 3077 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 16 ccacagaggccacacacggcggctc 40 |||||||||||||||| |||||||| Sbjct: 1004 ccacagaggccacacagggcggctc 1028
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 73 cgtcgccgtcctcatcctcctcctc 97 ||||||||||||| ||||||||||| Sbjct: 6095477 cgtcgccgtcctcctcctcctcctc 6095501 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 76 cgccgtcctcatcctcctcctctcc 100 |||||||||| |||||||||||||| Sbjct: 5591455 cgccgtcctcctcctcctcctctcc 5591479 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 76 cgccgtcctcatcctcctcc 95 |||||||||||||||||||| Sbjct: 27553046 cgccgtcctcatcctcctcc 27553027 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 62 tcgcgcccctccgtcgccgtcctcatcc 89 ||||||||| ||||| |||||||||||| Sbjct: 16197194 tcgcgccccgccgtccccgtcctcatcc 16197221
>gb|AC147241.2| Mus musculus BAC clone RP23-417C21 from chromosome 12, complete sequence Length = 199956 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 73 cgtcgccgtcctcatcctcctcctc 97 ||||||||||||| ||||||||||| Sbjct: 3259 cgtcgccgtcctcctcctcctcctc 3283
>gb|AC112146.3| Mus musculus BAC clone RP23-101G11 from 12, complete sequence Length = 188819 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 73 cgtcgccgtcctcatcctcctcctc 97 ||||||||||||| ||||||||||| Sbjct: 113159 cgtcgccgtcctcctcctcctcctc 113183
>gb|AC146334.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone B1356F10, complete sequence Length = 170681 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 63 cgcgcccctccgtcgccgtcc 83 ||||||||||||||||||||| Sbjct: 93136 cgcgcccctccgtcgccgtcc 93156
>gb|AY282495.1| Homo sapiens bromodomain PHD finger transcription factor mRNA, complete cds Length = 8295 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 73 cgtcgccgtcctcatcctcctcctc 97 ||||||||||||| ||||||||||| Sbjct: 37 cgtcgccgtcctcctcctcctcctc 13
>emb|AL662964.3|OSJN00161 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0027H09, complete sequence Length = 155672 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 79 cgtcctcatcctcctcctctccggc 103 ||||||| ||||||||||||||||| Sbjct: 121858 cgtcctcctcctcctcctctccggc 121882
>gb|AC132214.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0040M05, from chromosome 3, complete sequence Length = 153126 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 76 cgccgtcctcatcctcctcctctcc 100 |||||||||| |||||||||||||| Sbjct: 134987 cgccgtcctcctcctcctcctctcc 135011
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 79 cgtcctcatcctcctcctctccggc 103 ||||||| ||||||||||||||||| Sbjct: 1826590 cgtcctcctcctcctcctctccggc 1826614 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 73 cgtcgccgtcctcatcctcctcctctcc 100 ||||||| ||||| |||||||||||||| Sbjct: 33811447 cgtcgccctcctcctcctcctcctctcc 33811420 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 76 cgccgtcctcatcctcctcc 95 |||||||||||||||||||| Sbjct: 1512096 cgccgtcctcatcctcctcc 1512077
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 63 cgcgcccctccgtcgccgtcc 83 ||||||||||||||||||||| Sbjct: 21569617 cgcgcccctccgtcgccgtcc 21569637 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 74 gtcgccgtcctcatcctcctcctc 97 |||||||||||| ||||||||||| Sbjct: 25585430 gtcgccgtcctcctcctcctcctc 25585407
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 73 cgtcgccgtcctcatcctcctcctc 97 ||||||||||||| ||||||||||| Sbjct: 25074162 cgtcgccgtcctcctcctcctcctc 25074186 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 84 tcatcctcctcctctccggc 103 |||||||||||||||||||| Sbjct: 1949892 tcatcctcctcctctccggc 1949873
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 73 cgtcgccgtcctcatcctcctcctc 97 ||||||||||||| ||||||||||| Sbjct: 6094690 cgtcgccgtcctcctcctcctcctc 6094714 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 76 cgccgtcctcatcctcctcctctcc 100 |||||||||| |||||||||||||| Sbjct: 5590670 cgccgtcctcctcctcctcctctcc 5590694 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 76 cgccgtcctcatcctcctcc 95 |||||||||||||||||||| Sbjct: 27644369 cgccgtcctcatcctcctcc 27644350 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 62 tcgcgcccctccgtcgccgtcctcatcc 89 ||||||||| ||||| |||||||||||| Sbjct: 16191727 tcgcgccccgccgtccccgtcctcatcc 16191754
>gb|AC105732.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0090D11, complete sequence Length = 174865 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 73 cgtcgccgtcctcatcctcctcctc 97 ||||||||||||| ||||||||||| Sbjct: 88953 cgtcgccgtcctcctcctcctcctc 88977
>gb|BC037422.1| Homo sapiens, Similar to fetal Alzheimer antigen, clone IMAGE:5497063, mRNA Length = 1576 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 73 cgtcgccgtcctcatcctcctcctc 97 ||||||||||||| ||||||||||| Sbjct: 666 cgtcgccgtcctcctcctcctcctc 642
>gb|AC105928.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0014O06, complete sequence Length = 168031 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 76 cgccgtcctcatcctcctcctctcc 100 |||||||||| |||||||||||||| Sbjct: 55154 cgccgtcctcctcctcctcctctcc 55178
>dbj|AP003514.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0698A06 Length = 156514 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 73 cgtcgccgtcctcatcctcctcctc 97 ||||||||||||| ||||||||||| Sbjct: 74000 cgtcgccgtcctcctcctcctcctc 74024
>dbj|AK120186.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013034M15, full insert sequence Length = 2673 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 73 cgtcgccgtcctcatcctcctcctc 97 ||||||||||||| ||||||||||| Sbjct: 58 cgtcgccgtcctcctcctcctcctc 82
>emb|CR792414.6| Zebrafish DNA sequence from clone CH211-95O10 in linkage group 4, complete sequence Length = 66595 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 81 tcctcatcctcctcctctccg 101 ||||||||||||||||||||| Sbjct: 5325 tcctcatcctcctcctctccg 5305
>emb|BX901908.8| Zebrafish DNA sequence from clone DKEY-268B12 in linkage group 4, complete sequence Length = 210697 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 81 tcctcatcctcctcctctccg 101 ||||||||||||||||||||| Sbjct: 123481 tcctcatcctcctcctctccg 123461
>emb|AL954657.14| Zebrafish DNA sequence from clone CH211-223E21 in linkage group 4, complete sequence Length = 200352 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 81 tcctcatcctcctcctctccg 101 ||||||||||||||||||||| Sbjct: 177324 tcctcatcctcctcctctccg 177304
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 63 cgcgcccctccgtcgccgtcc 83 ||||||||||||||||||||| Sbjct: 21879816 cgcgcccctccgtcgccgtcc 21879836 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 74 gtcgccgtcctcatcctcctcctc 97 |||||||||||| ||||||||||| Sbjct: 25904100 gtcgccgtcctcctcctcctcctc 25904077
>gb|U05237.1|HSU05237 Human fetal Alz-50-reactive clone 1 (FAC1) mRNA, complete cds Length = 2673 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 73 cgtcgccgtcctcatcctcctcctc 97 ||||||||||||| ||||||||||| Sbjct: 110 cgtcgccgtcctcctcctcctcctc 86
>ref|NM_182641.2| Homo sapiens fetal Alzheimer antigen (FALZ), transcript variant 1, mRNA Length = 10935 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 73 cgtcgccgtcctcatcctcctcctc 97 ||||||||||||| ||||||||||| Sbjct: 515 cgtcgccgtcctcctcctcctcctc 491
>ref|NM_004459.5| Homo sapiens fetal Alzheimer antigen (FALZ), transcript variant 2, mRNA Length = 10884 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 73 cgtcgccgtcctcatcctcctcctc 97 ||||||||||||| ||||||||||| Sbjct: 515 cgtcgccgtcctcctcctcctcctc 491
>gb|AC006534.10| Homo sapiens chromosome 17, clone RP11-557B23, complete sequence Length = 216789 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 73 cgtcgccgtcctcatcctcctcctc 97 ||||||||||||| ||||||||||| Sbjct: 189631 cgtcgccgtcctcctcctcctcctc 189607
>dbj|AB032251.1| Homo sapiens BPTF mRNA for bromodomain PHD finger transcription factor, complete cds Length = 9700 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 73 cgtcgccgtcctcatcctcctcctc 97 ||||||||||||| ||||||||||| Sbjct: 508 cgtcgccgtcctcctcctcctcctc 484
>gb|AC084380.9| Oryza sativa chromosome 3 BAC OSJNBa0090P23 genomic sequence, complete sequence Length = 126163 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 62 tcgcgcccctccgtcgccgtcctcatcc 89 ||||||||| ||||| |||||||||||| Sbjct: 122373 tcgcgccccgccgtccccgtcctcatcc 122400
>gb|AC160526.13| Mus musculus chromosome 8, clone RP24-191C23, complete sequence Length = 174746 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 274 tcctgcttccttcagagcca 293 |||||||||||||||||||| Sbjct: 17178 tcctgcttccttcagagcca 17197
>gb|AC110512.13| Mus musculus chromosome 15, clone RP24-134E9, complete sequence Length = 163319 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 277 tgcttccttcagagccactg 296 |||||||||||||||||||| Sbjct: 135923 tgcttccttcagagccactg 135942
>ref|XM_479654.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1917 Score = 40.1 bits (20), Expect = 6.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 75 tcgccgtcctcatcctcctcctctccggcgtc 106 ||||||||||| ||||||||||| || ||||| Sbjct: 109 tcgccgtcctcctcctcctcctcgcctgcgtc 140
>ref|NM_184620.1| Oryza sativa (japonica cultivar-group), mRNA Length = 489 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 62 tcgcgcccctccgtcgccgtcctcatcc 89 ||||||||| ||||| |||||||||||| Sbjct: 249 tcgcgccccgccgtccccgtcctcatcc 222
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 55 ctccacctcgcgcccctccg 74 |||||||||||||||||||| Sbjct: 1428701 ctccacctcgcgcccctccg 1428682
>gb|AY169345.1| Aeromonas schubertii strain CECT 4254 RNA polymerase sigma-70 factor (rpoD) gene, partial cds Length = 825 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 79 cgtcctcatcctcctcctct 98 |||||||||||||||||||| Sbjct: 282 cgtcctcatcctcctcctct 263
>gb|BC100038.1| Danio rerio zgc:111835, mRNA (cDNA clone MGC:111835 IMAGE:5605044), complete cds Length = 3113 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 73 cgtcgccgtcctcatcctcctcctctcc 100 ||||| ||||||| |||||||||||||| Sbjct: 455 cgtcgtcgtcctcctcctcctcctctcc 428
>gb|AC087552.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0519E07, complete sequence Length = 151399 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 84 tcatcctcctcctctccggc 103 |||||||||||||||||||| Sbjct: 42769 tcatcctcctcctctccggc 42750
>gb|BC073057.1| Xenopus laevis hypothetical protein LOC443615, mRNA (cDNA clone IMAGE:5074177), partial cds Length = 2360 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 276 ctgcttccttcagagccactgatg 299 ||||||| |||||||||||||||| Sbjct: 1147 ctgcttctttcagagccactgatg 1124
>ref|XM_368355.1| Magnaporthe grisea 70-15 chromosome VI hypothetical protein (MG00889.4) partial mRNA Length = 3885 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 79 cgtcctcatcctcctcctct 98 |||||||||||||||||||| Sbjct: 556 cgtcctcatcctcctcctct 537
>gb|AC091807.4| Homo sapiens chromosome X clone RP6-186E3 map p11.4, complete sequence Length = 172150 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 278 gcttccttcagagccactga 297 |||||||||||||||||||| Sbjct: 134521 gcttccttcagagccactga 134540
>gb|AY570729.1| Danio rerio nuclear ribonucleoprotein U-like protein mRNA, complete cds Length = 4130 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 73 cgtcgccgtcctcatcctcctcctctcc 100 ||||| ||||||| |||||||||||||| Sbjct: 470 cgtcgtcgtcctcctcctcctcctctcc 443
>ref|NM_001033595.1| Danio rerio zgc:111835 (zgc:111835), mRNA Length = 3113 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 73 cgtcgccgtcctcatcctcctcctctcc 100 ||||| ||||||| |||||||||||||| Sbjct: 455 cgtcgtcgtcctcctcctcctcctctcc 428
>gb|CP000058.1| Pseudomonas syringae pv. phaseolicola 1448A, complete genome Length = 5928787 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 299 gtcattatcggctggatgaa 318 |||||||||||||||||||| Sbjct: 4497810 gtcattatcggctggatgaa 4497829
>gb|AC183838.2| Pan troglodytes BAC clone CH251-11K10 from chromosome 7, complete sequence Length = 153555 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 43 catggctccctcctccacct 62 |||||||||||||||||||| Sbjct: 13606 catggctccctcctccacct 13587
>gb|AC004845.2| Homo sapiens PAC clone RP4-635O5 from 7, complete sequence Length = 69847 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 43 catggctccctcctccacct 62 |||||||||||||||||||| Sbjct: 15909 catggctccctcctccacct 15890
>gb|AC108870.2| Oryza sativa (japonica cultivar-group) chromosome 11 PAC clone P0682E05, complete sequence Length = 162223 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 74 gtcgccgtcctcatcctcctcctc 97 |||||||||||| ||||||||||| Sbjct: 75477 gtcgccgtcctcctcctcctcctc 75454
>gb|AC123791.4| Mus musculus BAC clone RP24-304L14 from chromosome 15, complete sequence Length = 149316 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 277 tgcttccttcagagccactg 296 |||||||||||||||||||| Sbjct: 12579 tgcttccttcagagccactg 12598
>gb|AC137998.2| Oryza sativa chromosome 3 BAC OSJNBa0010B01 genomic sequence, complete sequence Length = 27470 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 76 cgccgtcctcatcctcctcc 95 |||||||||||||||||||| Sbjct: 9728 cgccgtcctcatcctcctcc 9747
>emb|CR667946.2|CNS0FECW Tetraodon nigroviridis full-length cDNA Length = 1530 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 81 tcctcatcctcctcctctcc 100 |||||||||||||||||||| Sbjct: 888 tcctcatcctcctcctctcc 869
>gb|AC012018.24| Homo sapiens 12 BAC RP11-691B3 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 60163 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 160 aggaggaggggatggcctgt 179 |||||||||||||||||||| Sbjct: 50939 aggaggaggggatggcctgt 50920
>ref|XM_778098.1| PREDICTED: Strongylocentrotus purpuratus similar to AN1, ubiquitin-like, homolog (LOC577894), mRNA Length = 1815 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 81 tcctcatcctcctcctctcc 100 |||||||||||||||||||| Sbjct: 530 tcctcatcctcctcctctcc 511
>gb|AC171497.3| Pan troglodytes chromosome X clone PTB-121G07 map human ortholog p11.4, complete sequence Length = 227065 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 278 gcttccttcagagccactga 297 |||||||||||||||||||| Sbjct: 177248 gcttccttcagagccactga 177267
>emb|AL606829.13| Mouse DNA sequence from clone RP23-10M12 on chromosome 11 Contains a novel gene (MOR280-1) similar to the olfactory receptor family, a novel gene (D330012D11Rik), the Zfp62 gene for zinc finger protein 62, the Mgat1 gene for mannoside acetylglucosaminyltransferase 1, a novel gene (MOR256-24) similar to the olfactory receptor family, a novel gene (MOR256-25) similar to the olfactory receptor family, a novel gene (LOC216715) similar to the olfactory receptor MOR256 family, a novel gene (MOR256-27) similar to the olfactory receptor family, a novel gene (MOR256-2) similar to the olfactory receptor family and three CpG islands, complete sequence Length = 203286 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 81 tcctcatcctcctcctctcc 100 |||||||||||||||||||| Sbjct: 184977 tcctcatcctcctcctctcc 184958
>emb|AL606689.4|OSJN00078 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0042N22, complete sequence Length = 152676 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 76 cgccgtcctcatcctcctcc 95 |||||||||||||||||||| Sbjct: 32262 cgccgtcctcatcctcctcc 32243
>emb|AL606999.3|OSJN00127 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0084K01, complete sequence Length = 163448 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 73 cgtcgccgtcctcatcctcctcctctcc 100 ||||||| ||||| |||||||||||||| Sbjct: 23346 cgtcgccctcctcctcctcctcctctcc 23319
>emb|AL669979.13| Mouse DNA sequence from clone RP23-93O11 on chromosome 11 Contains an H+ transporting, mitochondria ATP synthase F0 complex subunit g (Atp5l) pseudogene, the Peli1 gene for pellino 1, a novel pseudogene, a ribosomal protein large P0 (Rplp0) pseudogene, the Vps54 gene for vacuolar protein sorting 54 (yeast), a acyl-Coenzyme A dehydrogenase family (Acad) pseudogene and two CpG islands, complete sequence Length = 206768 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 81 tcctcatcctcctcctctcc 100 |||||||||||||||||||| Sbjct: 185442 tcctcatcctcctcctctcc 185461
>gb|AC100789.2| Homo sapiens chromosome X, clone RP11-907I17, complete sequence Length = 183453 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 278 gcttccttcagagccactga 297 |||||||||||||||||||| Sbjct: 35214 gcttccttcagagccactga 35233
>gb|AC067930.7| Homo sapiens chromosome 8, clone RP11-661A12, complete sequence Length = 174906 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 81 tcctcatcctcctcctctcc 100 |||||||||||||||||||| Sbjct: 82553 tcctcatcctcctcctctcc 82572
>gb|AC182639.3| Pan troglodytes BAC clone CH251-322N11 from chromosome 7, complete sequence Length = 162580 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 43 catggctccctcctccacct 62 |||||||||||||||||||| Sbjct: 136257 catggctccctcctccacct 136238
>dbj|AB206953.1| Pichia pastoris RPL29 gene, promoter region Length = 1415 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 79 cgtcctcatcctcctcctct 98 |||||||||||||||||||| Sbjct: 390 cgtcctcatcctcctcctct 371
>dbj|AK127676.1| Homo sapiens cDNA FLJ45774 fis, clone NETRP2003539 Length = 2158 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 160 aggaggaggggatggcctgt 179 |||||||||||||||||||| Sbjct: 1631 aggaggaggggatggcctgt 1612
>gb|AC069362.12| Homo sapiens, clone RP11-745J24, complete sequence Length = 176295 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 278 gcttccttcagagccactga 297 |||||||||||||||||||| Sbjct: 30193 gcttccttcagagccactga 30174
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 6.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 76 cgccgtcctcatcctcctcctctccggcgtcc 107 |||||||||| ||||||||||| ||| ||||| Sbjct: 26899227 cgccgtcctcctcctcctcctcaccgtcgtcc 26899258 Score = 40.1 bits (20), Expect = 6.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 75 tcgccgtcctcatcctcctcctctccggcgtc 106 ||||||||||| ||||||||||| || ||||| Sbjct: 114527 tcgccgtcctcctcctcctcctcgcctgcgtc 114496
>ref|NM_001001592.1| Danio rerio heterogeneous nuclear ribonucleoprotein U (hnrpu), mRNA Length = 4130 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 73 cgtcgccgtcctcatcctcctcctctcc 100 ||||| ||||||| |||||||||||||| Sbjct: 470 cgtcgtcgtcctcctcctcctcctctcc 443
>gb|AC005343.1| Homo sapiens 12 BAC RP11-21K20 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 137213 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 43 catggctccctcctccacct 62 |||||||||||||||||||| Sbjct: 65262 catggctccctcctccacct 65243
>gb|AC068874.21| Homo sapiens chromosome 17, clone RP11-399J11, complete sequence Length = 174914 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 146 ccggagcagcagccaggagg 165 |||||||||||||||||||| Sbjct: 50011 ccggagcagcagccaggagg 49992
>gb|AC087651.19| Homo sapiens chromosome 17, clone RP11-309N17, complete sequence Length = 197148 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 146 ccggagcagcagccaggagg 165 |||||||||||||||||||| Sbjct: 30114 ccggagcagcagccaggagg 30133
>dbj|AP004592.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0666G10 Length = 150761 Score = 40.1 bits (20), Expect = 6.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 76 cgccgtcctcatcctcctcctctccggcgtcc 107 |||||||||| ||||||||||| ||| ||||| Sbjct: 627 cgccgtcctcctcctcctcctcaccgtcgtcc 658
>dbj|AP006584.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:B1197G05 Length = 130823 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 83 ctcatcctcctcctctccggcgtc 106 |||||||||||| ||||||||||| Sbjct: 22356 ctcatcctcctcgtctccggcgtc 22333
>dbj|AP005659.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0649C11 Length = 138870 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 83 ctcatcctcctcctctccggcgtc 106 |||||||||||| ||||||||||| Sbjct: 119046 ctcatcctcctcgtctccggcgtc 119023
>dbj|AP002837.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0019F11 Length = 123673 Score = 40.1 bits (20), Expect = 6.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 73 cgtcgccgtcctcatcctcctcctctccggcg 104 ||||| |||| ||||||||||| ||||||||| Sbjct: 106050 cgtcgacgtcatcatcctcctcttctccggcg 106081
>dbj|AP003332.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1097D05 Length = 144879 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 81 tcctcatcctcctcctctccggcg 104 ||||| |||||||||||||||||| Sbjct: 129702 tcctcctcctcctcctctccggcg 129679
>dbj|AP004654.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0015C07 Length = 149079 Score = 40.1 bits (20), Expect = 6.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 75 tcgccgtcctcatcctcctcctctccggcgtc 106 ||||||||||| ||||||||||| || ||||| Sbjct: 29862 tcgccgtcctcctcctcctcctcgcctgcgtc 29831
>emb|BX530725.11| Mouse DNA sequence from clone RP23-49E16 on chromosome 4, complete sequence Length = 80674 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 81 tcctcatcctcctcctctcc 100 |||||||||||||||||||| Sbjct: 28645 tcctcatcctcctcctctcc 28664
>dbj|AP005406.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:B1147B12 Length = 127902 Score = 40.1 bits (20), Expect = 6.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 75 tcgccgtcctcatcctcctcctctccggcgtc 106 ||||||||||| ||||||||||| || ||||| Sbjct: 114527 tcgccgtcctcctcctcctcctcgcctgcgtc 114496
>dbj|AP004464.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0665C04 Length = 177054 Score = 40.1 bits (20), Expect = 6.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 76 cgccgtcctcatcctcctcctctccggcgtcc 107 |||||||||| ||||||||||| ||| ||||| Sbjct: 162017 cgccgtcctcctcctcctcctcaccgtcgtcc 162048
>dbj|AK122031.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033112G04, full insert sequence Length = 1358 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 84 tcatcctcctcctctccggc 103 |||||||||||||||||||| Sbjct: 140 tcatcctcctcctctccggc 121
>dbj|AK120311.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013055G03, full insert sequence Length = 639 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 62 tcgcgcccctccgtcgccgtcctcatcc 89 ||||||||| ||||| |||||||||||| Sbjct: 176 tcgcgccccgccgtccccgtcctcatcc 203
>dbj|AK119205.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-041-D11, full insert sequence Length = 1601 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 84 tcatcctcctcctctccggc 103 |||||||||||||||||||| Sbjct: 139 tcatcctcctcctctccggc 120
>dbj|AK098460.1| Homo sapiens cDNA FLJ25594 fis, clone JTH13012 Length = 1840 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 81 tcctcatcctcctcctctcc 100 |||||||||||||||||||| Sbjct: 1090 tcctcatcctcctcctctcc 1109
>dbj|AK104076.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-028-C08, full insert sequence Length = 1325 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 73 cgtcgccgtcctcatcctcctcctctcc 100 ||||||| ||||| |||||||||||||| Sbjct: 118 cgtcgccctcctcctcctcctcctctcc 91
>dbj|AK103551.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033132F12, full insert sequence Length = 1431 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 73 cgtcgccgtcctcatcctcctcctctcc 100 ||||||| ||||| |||||||||||||| Sbjct: 191 cgtcgccctcctcctcctcctcctctcc 164
>dbj|AK068504.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013151H24, full insert sequence Length = 1848 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 83 ctcatcctcctcctctccggcgtc 106 |||||||||||| ||||||||||| Sbjct: 68 ctcatcctcctcgtctccggcgtc 91
>dbj|AK064841.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000G03, full insert sequence Length = 1917 Score = 40.1 bits (20), Expect = 6.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 75 tcgccgtcctcatcctcctcctctccggcgtc 106 ||||||||||| ||||||||||| || ||||| Sbjct: 109 tcgccgtcctcctcctcctcctcgcctgcgtc 140
>emb|BX470246.11| Zebrafish DNA sequence from clone DKEYP-8F4 in linkage group 20, complete sequence Length = 148286 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 73 cgtcgccgtcctcatcctcctcctctcc 100 ||||| ||||||| |||||||||||||| Sbjct: 29324 cgtcgtcgtcctcctcctcctcctctcc 29351
>dbj|AK061835.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-040-D07, full insert sequence Length = 1373 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 73 cgtcgccgtcctcatcctcctcctctcc 100 ||||||| ||||| |||||||||||||| Sbjct: 132 cgtcgccctcctcctcctcctcctctcc 105
>dbj|AK061809.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-040-A10, full insert sequence Length = 1166 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 84 tcatcctcctcctctccggc 103 |||||||||||||||||||| Sbjct: 139 tcatcctcctcctctccggc 120
>dbj|AB037150.1| Oryza sativa (japonica cultivar-group) OsRPN8 mRNA for 26S proteasome regulatory particle non-ATPase subunit8, complete cds Length = 1308 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 73 cgtcgccgtcctcatcctcctcctctcc 100 ||||||| ||||| |||||||||||||| Sbjct: 103 cgtcgccctcctcctcctcctcctctcc 76 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,545,138 Number of Sequences: 3902068 Number of extensions: 4545138 Number of successful extensions: 140184 Number of sequences better than 10.0: 113 Number of HSP's better than 10.0 without gapping: 127 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 138117 Number of HSP's gapped (non-prelim): 2064 length of query: 488 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 466 effective length of database: 17,147,199,772 effective search space: 7990595093752 effective search space used: 7990595093752 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)