ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast78h05 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 174 bits (88), Expect = 1e-40 Identities = 121/132 (91%) Strand = Plus / Plus Query: 119 gtgacgcgggtggcgcagagggtggtggccccgtcggcgcccacgcccggcggcgagctc 178 |||||||||||||| ||| ||||||||||||| |||||| | ||||| || |||| |||| Sbjct: 23055256 gtgacgcgggtggctcagcgggtggtggccccatcggcggcgacgcctgggggcgcgctc 23055315 Query: 179 ccgctgtcctggctcgaccgctaccccacgcagcgtgcgctcatcgagtccctccacgtc 238 |||||||||||||||||||||||||| |||||||| |||||||||||||||||||| ||| Sbjct: 23055316 ccgctgtcctggctcgaccgctacccgacgcagcgcgcgctcatcgagtccctccatgtc 23055375 Query: 239 ttcaagggccgc 250 |||||||||||| Sbjct: 23055376 ttcaagggccgc 23055387 Score = 89.7 bits (45), Expect = 7e-15 Identities = 113/135 (83%), Gaps = 3/135 (2%) Strand = Plus / Plus Query: 287 atcgagcgcgccctggccgctgcgctcgtcagctactaccccatcgccggccggctcgcg 346 ||||||||||| || || || |||||||| |||||||||||||||||||||||||| ||| Sbjct: 23055418 atcgagcgcgcgctcgcggcggcgctcgtgagctactaccccatcgccggccggctggcg 23055477 Query: 347 ctgtcc---gacggcggcgagctggtcgtggactgtaccggcgagggcgtgtggttcgtg 403 | | || || || ||||| ||||| ||||||||||||||||| ||||||||| | Sbjct: 23055478 gagcgcggggatggtggggagctcgtcgtcgactgtaccggcgagggtgtgtggttcatc 23055537 Query: 404 gaggccaccgcgagc 418 |||||||| |||||| Sbjct: 23055538 gaggccacggcgagc 23055552
>dbj|AP004571.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0652A05 Length = 150455 Score = 174 bits (88), Expect = 1e-40 Identities = 121/132 (91%) Strand = Plus / Plus Query: 119 gtgacgcgggtggcgcagagggtggtggccccgtcggcgcccacgcccggcggcgagctc 178 |||||||||||||| ||| ||||||||||||| |||||| | ||||| || |||| |||| Sbjct: 121800 gtgacgcgggtggctcagcgggtggtggccccatcggcggcgacgcctgggggcgcgctc 121859 Query: 179 ccgctgtcctggctcgaccgctaccccacgcagcgtgcgctcatcgagtccctccacgtc 238 |||||||||||||||||||||||||| |||||||| |||||||||||||||||||| ||| Sbjct: 121860 ccgctgtcctggctcgaccgctacccgacgcagcgcgcgctcatcgagtccctccatgtc 121919 Query: 239 ttcaagggccgc 250 |||||||||||| Sbjct: 121920 ttcaagggccgc 121931 Score = 89.7 bits (45), Expect = 7e-15 Identities = 113/135 (83%), Gaps = 3/135 (2%) Strand = Plus / Plus Query: 287 atcgagcgcgccctggccgctgcgctcgtcagctactaccccatcgccggccggctcgcg 346 ||||||||||| || || || |||||||| |||||||||||||||||||||||||| ||| Sbjct: 121962 atcgagcgcgcgctcgcggcggcgctcgtgagctactaccccatcgccggccggctggcg 122021 Query: 347 ctgtcc---gacggcggcgagctggtcgtggactgtaccggcgagggcgtgtggttcgtg 403 | | || || || ||||| ||||| ||||||||||||||||| ||||||||| | Sbjct: 122022 gagcgcggggatggtggggagctcgtcgtcgactgtaccggcgagggtgtgtggttcatc 122081 Query: 404 gaggccaccgcgagc 418 |||||||| |||||| Sbjct: 122082 gaggccacggcgagc 122096
>dbj|AP004236.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0417D05 Length = 165752 Score = 174 bits (88), Expect = 1e-40 Identities = 121/132 (91%) Strand = Plus / Plus Query: 119 gtgacgcgggtggcgcagagggtggtggccccgtcggcgcccacgcccggcggcgagctc 178 |||||||||||||| ||| ||||||||||||| |||||| | ||||| || |||| |||| Sbjct: 5904 gtgacgcgggtggctcagcgggtggtggccccatcggcggcgacgcctgggggcgcgctc 5963 Query: 179 ccgctgtcctggctcgaccgctaccccacgcagcgtgcgctcatcgagtccctccacgtc 238 |||||||||||||||||||||||||| |||||||| |||||||||||||||||||| ||| Sbjct: 5964 ccgctgtcctggctcgaccgctacccgacgcagcgcgcgctcatcgagtccctccatgtc 6023 Query: 239 ttcaagggccgc 250 |||||||||||| Sbjct: 6024 ttcaagggccgc 6035 Score = 89.7 bits (45), Expect = 7e-15 Identities = 113/135 (83%), Gaps = 3/135 (2%) Strand = Plus / Plus Query: 287 atcgagcgcgccctggccgctgcgctcgtcagctactaccccatcgccggccggctcgcg 346 ||||||||||| || || || |||||||| |||||||||||||||||||||||||| ||| Sbjct: 6066 atcgagcgcgcgctcgcggcggcgctcgtgagctactaccccatcgccggccggctggcg 6125 Query: 347 ctgtcc---gacggcggcgagctggtcgtggactgtaccggcgagggcgtgtggttcgtg 403 | | || || || ||||| ||||| ||||||||||||||||| ||||||||| | Sbjct: 6126 gagcgcggggatggtggggagctcgtcgtcgactgtaccggcgagggtgtgtggttcatc 6185 Query: 404 gaggccaccgcgagc 418 |||||||| |||||| Sbjct: 6186 gaggccacggcgagc 6200
>dbj|AK120657.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013158E04, full insert sequence Length = 1507 Score = 174 bits (88), Expect = 1e-40 Identities = 121/132 (91%) Strand = Plus / Plus Query: 119 gtgacgcgggtggcgcagagggtggtggccccgtcggcgcccacgcccggcggcgagctc 178 |||||||||||||| ||| ||||||||||||| |||||| | ||||| || |||| |||| Sbjct: 110 gtgacgcgggtggctcagcgggtggtggccccatcggcggcgacgcctgggggcgcgctc 169 Query: 179 ccgctgtcctggctcgaccgctaccccacgcagcgtgcgctcatcgagtccctccacgtc 238 |||||||||||||||||||||||||| |||||||| |||||||||||||||||||| ||| Sbjct: 170 ccgctgtcctggctcgaccgctacccgacgcagcgcgcgctcatcgagtccctccatgtc 229 Query: 239 ttcaagggccgc 250 |||||||||||| Sbjct: 230 ttcaagggccgc 241 Score = 89.7 bits (45), Expect = 7e-15 Identities = 113/135 (83%), Gaps = 3/135 (2%) Strand = Plus / Plus Query: 287 atcgagcgcgccctggccgctgcgctcgtcagctactaccccatcgccggccggctcgcg 346 ||||||||||| || || || |||||||| |||||||||||||||||||||||||| ||| Sbjct: 272 atcgagcgcgcgctcgcggcggcgctcgtgagctactaccccatcgccggccggctggcg 331 Query: 347 ctgtcc---gacggcggcgagctggtcgtggactgtaccggcgagggcgtgtggttcgtg 403 | | || || || ||||| ||||| ||||||||||||||||| ||||||||| | Sbjct: 332 gagcgcggggatggtggggagctcgtcgtcgactgtaccggcgagggtgtgtggttcatc 391 Query: 404 gaggccaccgcgagc 418 |||||||| |||||| Sbjct: 392 gaggccacggcgagc 406
>ref|XM_476061.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1320 Score = 79.8 bits (40), Expect = 7e-12 Identities = 55/60 (91%) Strand = Plus / Plus Query: 185 tcctggctcgaccgctaccccacgcagcgtgcgctcatcgagtccctccacgtcttcaag 244 ||||||||||||||||||||||| ||| |||||||||||||| ||||||||||||||| Sbjct: 94 tcctggctcgaccgctaccccacccagatggcgctcatcgagtcgctccacgtcttcaag 153
>gb|AC130610.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0478F09, complete sequence Length = 145070 Score = 79.8 bits (40), Expect = 7e-12 Identities = 55/60 (91%) Strand = Plus / Minus Query: 185 tcctggctcgaccgctaccccacgcagcgtgcgctcatcgagtccctccacgtcttcaag 244 ||||||||||||||||||||||| ||| |||||||||||||| ||||||||||||||| Sbjct: 47153 tcctggctcgaccgctaccccacccagatggcgctcatcgagtcgctccacgtcttcaag 47094
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 79.8 bits (40), Expect = 7e-12 Identities = 55/60 (91%) Strand = Plus / Minus Query: 185 tcctggctcgaccgctaccccacgcagcgtgcgctcatcgagtccctccacgtcttcaag 244 ||||||||||||||||||||||| ||| |||||||||||||| ||||||||||||||| Sbjct: 4679148 tcctggctcgaccgctaccccacccagatggcgctcatcgagtcgctccacgtcttcaag 4679089 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Minus Query: 380 accggcgagggcgtgtggttcgtggaggc 408 ||||||||||||| ||||||||||||||| Sbjct: 11514252 accggcgagggcgcgtggttcgtggaggc 11514224 Score = 46.1 bits (23), Expect = 0.091 Identities = 41/47 (87%) Strand = Plus / Minus Query: 363 agctggtcgtggactgtaccggcgagggcgtgtggttcgtggaggcc 409 |||| ||||| ||||| ||||||||||||||| |||||| |||||| Sbjct: 2315756 agcttgtcgtcgactgcaccggcgagggcgtgctgttcgtcgaggcc 2315710 Score = 44.1 bits (22), Expect = 0.36 Identities = 46/54 (85%) Strand = Plus / Plus Query: 355 cggcggcgagctggtcgtggactgtaccggcgagggcgtgtggttcgtggaggc 408 |||||||||| ||| |||| || ||||||||||| | ||||||||||||||| Sbjct: 2083847 cggcggcgaggtggcggtggcgtgcaccggcgagggggcgtggttcgtggaggc 2083900
>dbj|AK100028.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013147B02, full insert sequence Length = 1897 Score = 79.8 bits (40), Expect = 7e-12 Identities = 55/60 (91%) Strand = Plus / Plus Query: 185 tcctggctcgaccgctaccccacgcagcgtgcgctcatcgagtccctccacgtcttcaag 244 ||||||||||||||||||||||| ||| |||||||||||||| ||||||||||||||| Sbjct: 181 tcctggctcgaccgctaccccacccagatggcgctcatcgagtcgctccacgtcttcaag 240
>ref|NM_192784.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1341 Score = 73.8 bits (37), Expect = 4e-10 Identities = 49/53 (92%) Strand = Plus / Plus Query: 366 tggtcgtggactgtaccggcgagggcgtgtggttcgtggaggccaccgcgagc 418 |||| |||||||| ||||||||||| |||||||||||||||||||| |||||| Sbjct: 317 tggtggtggactgcaccggcgagggggtgtggttcgtggaggccacggcgagc 369
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 73.8 bits (37), Expect = 4e-10 Identities = 49/53 (92%) Strand = Plus / Minus Query: 366 tggtcgtggactgtaccggcgagggcgtgtggttcgtggaggccaccgcgagc 418 |||| |||||||| ||||||||||| |||||||||||||||||||| |||||| Sbjct: 24392551 tggtggtggactgcaccggcgagggggtgtggttcgtggaggccacggcgagc 24392499 Score = 54.0 bits (27), Expect = 4e-04 Identities = 54/63 (85%) Strand = Plus / Minus Query: 182 ctgtcctggctcgaccgctaccccacgcagcgtgcgctcatcgagtccctccacgtcttc 241 ||||| ||||||||||||||||| || ||| ||||| |||||||| |||||||| ||| Sbjct: 4110922 ctgtcgtggctcgaccgctaccctacccagatggcgctgatcgagtcgctccacgtgttc 4110863 Query: 242 aag 244 ||| Sbjct: 4110862 aag 4110860 Score = 52.0 bits (26), Expect = 0.001 Identities = 62/74 (83%) Strand = Plus / Plus Query: 319 ctactaccccatcgccggccggctcgcgctgtccgacggcggcgagctggtcgtggactg 378 ||||||||| |||||||||| || ||||| |||||| ||| |||| |||||||||| Sbjct: 40501669 ctactaccctctcgccggccgcctggcgctcaccgacgacgggaagcttatcgtggactg 40501728 Query: 379 taccggcgagggcg 392 ||||||||||||| Sbjct: 40501729 caccggcgagggcg 40501742 Score = 50.1 bits (25), Expect = 0.006 Identities = 40/45 (88%) Strand = Plus / Minus Query: 370 cgtggactgtaccggcgagggcgtgtggttcgtggaggccaccgc 414 |||||| || ||||||||||||| ||||||||||||||| |||| Sbjct: 10563011 cgtggagtgcaccggcgagggcgcctggttcgtggaggccgccgc 10562967 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 24 gcgccaccaccacaacccaga 44 ||||||||||||||||||||| Sbjct: 7452580 gcgccaccaccacaacccaga 7452560
>dbj|AP002866.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0410E01 Length = 166753 Score = 73.8 bits (37), Expect = 4e-10 Identities = 49/53 (92%) Strand = Plus / Minus Query: 366 tggtcgtggactgtaccggcgagggcgtgtggttcgtggaggccaccgcgagc 418 |||| |||||||| ||||||||||| |||||||||||||||||||| |||||| Sbjct: 138455 tggtggtggactgcaccggcgagggggtgtggttcgtggaggccacggcgagc 138403
>gb|BT018886.1| Zea mays clone EL01T0205E01.d mRNA sequence Length = 1617 Score = 71.9 bits (36), Expect = 2e-09 Identities = 57/64 (89%) Strand = Plus / Plus Query: 182 ctgtcctggctcgaccgctaccccacgcagcgtgcgctcatcgagtccctccacgtcttc 241 ||||||||||| ||||||||||| |||||| |||||||||||||| |||||||| ||| Sbjct: 166 ctgtcctggctagaccgctacccgacgcagatggcgctcatcgagtcgctccacgtgttc 225 Query: 242 aagg 245 |||| Sbjct: 226 aagg 229
>ref|NM_189533.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1314 Score = 54.0 bits (27), Expect = 4e-04 Identities = 54/63 (85%) Strand = Plus / Plus Query: 182 ctgtcctggctcgaccgctaccccacgcagcgtgcgctcatcgagtccctccacgtcttc 241 ||||| ||||||||||||||||| || ||| ||||| |||||||| |||||||| ||| Sbjct: 82 ctgtcgtggctcgaccgctaccctacccagatggcgctgatcgagtcgctccacgtgttc 141 Query: 242 aag 244 ||| Sbjct: 142 aag 144
>dbj|AP002903.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0509B06 Length = 104515 Score = 54.0 bits (27), Expect = 4e-04 Identities = 54/63 (85%) Strand = Plus / Minus Query: 182 ctgtcctggctcgaccgctaccccacgcagcgtgcgctcatcgagtccctccacgtcttc 241 ||||| ||||||||||||||||| || ||| ||||| |||||||| |||||||| ||| Sbjct: 77665 ctgtcgtggctcgaccgctaccctacccagatggcgctgatcgagtcgctccacgtgttc 77606 Query: 242 aag 244 ||| Sbjct: 77605 aag 77603
>dbj|AP002524.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0406H10 Length = 156419 Score = 54.0 bits (27), Expect = 4e-04 Identities = 54/63 (85%) Strand = Plus / Minus Query: 182 ctgtcctggctcgaccgctaccccacgcagcgtgcgctcatcgagtccctccacgtcttc 241 ||||| ||||||||||||||||| || ||| ||||| |||||||| |||||||| ||| Sbjct: 57893 ctgtcgtggctcgaccgctaccctacccagatggcgctgatcgagtcgctccacgtgttc 57834 Query: 242 aag 244 ||| Sbjct: 57833 aag 57831
>ref|XM_463664.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1329 Score = 52.0 bits (26), Expect = 0.001 Identities = 62/74 (83%) Strand = Plus / Plus Query: 319 ctactaccccatcgccggccggctcgcgctgtccgacggcggcgagctggtcgtggactg 378 ||||||||| |||||||||| || ||||| |||||| ||| |||| |||||||||| Sbjct: 252 ctactaccctctcgccggccgcctggcgctcaccgacgacgggaagcttatcgtggactg 311 Query: 379 taccggcgagggcg 392 ||||||||||||| Sbjct: 312 caccggcgagggcg 325
>dbj|AP004223.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1033B05 Length = 138882 Score = 52.0 bits (26), Expect = 0.001 Identities = 62/74 (83%) Strand = Plus / Plus Query: 319 ctactaccccatcgccggccggctcgcgctgtccgacggcggcgagctggtcgtggactg 378 ||||||||| |||||||||| || ||||| |||||| ||| |||| |||||||||| Sbjct: 63293 ctactaccctctcgccggccgcctggcgctcaccgacgacgggaagcttatcgtggactg 63352 Query: 379 taccggcgagggcg 392 ||||||||||||| Sbjct: 63353 caccggcgagggcg 63366
>ref|NM_183607.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 453 Score = 50.1 bits (25), Expect = 0.006 Identities = 40/45 (88%) Strand = Plus / Plus Query: 370 cgtggactgtaccggcgagggcgtgtggttcgtggaggccaccgc 414 |||||| || ||||||||||||| ||||||||||||||| |||| Sbjct: 285 cgtggagtgcaccggcgagggcgcctggttcgtggaggccgccgc 329
>gb|AC136229.3| Oryza sativa (japonica cultivar-group) chromosome 5 PAC clone P0690B12, complete sequence Length = 135323 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Minus Query: 380 accggcgagggcgtgtggttcgtggaggc 408 ||||||||||||| ||||||||||||||| Sbjct: 83746 accggcgagggcgcgtggttcgtggaggc 83718
>dbj|AP002482.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0706B05 Length = 187835 Score = 50.1 bits (25), Expect = 0.006 Identities = 40/45 (88%) Strand = Plus / Minus Query: 370 cgtggactgtaccggcgagggcgtgtggttcgtggaggccaccgc 414 |||||| || ||||||||||||| ||||||||||||||| |||| Sbjct: 57634 cgtggagtgcaccggcgagggcgcctggttcgtggaggccgccgc 57590
>dbj|AK070443.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023054D03, full insert sequence Length = 1655 Score = 50.1 bits (25), Expect = 0.006 Identities = 40/45 (88%) Strand = Plus / Plus Query: 370 cgtggactgtaccggcgagggcgtgtggttcgtggaggccaccgc 414 |||||| || ||||||||||||| ||||||||||||||| |||| Sbjct: 392 cgtggagtgcaccggcgagggcgcctggttcgtggaggccgccgc 436
>dbj|AK067851.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013123P12, full insert sequence Length = 1553 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Plus Query: 380 accggcgagggcgtgtggttcgtggaggc 408 ||||||||||||| ||||||||||||||| Sbjct: 410 accggcgagggcgcgtggttcgtggaggc 438
>dbj|AK060689.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-030-A09, full insert sequence Length = 1553 Score = 50.1 bits (25), Expect = 0.006 Identities = 40/45 (88%) Strand = Plus / Plus Query: 370 cgtggactgtaccggcgagggcgtgtggttcgtggaggccaccgc 414 |||||| || ||||||||||||| ||||||||||||||| |||| Sbjct: 287 cgtggagtgcaccggcgagggcgcctggttcgtggaggccgccgc 331
>ref|XM_475582.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1335 Score = 46.1 bits (23), Expect = 0.091 Identities = 41/47 (87%) Strand = Plus / Plus Query: 363 agctggtcgtggactgtaccggcgagggcgtgtggttcgtggaggcc 409 |||| ||||| ||||| ||||||||||||||| |||||| |||||| Sbjct: 266 agcttgtcgtcgactgcaccggcgagggcgtgctgttcgtcgaggcc 312
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 46.1 bits (23), Expect = 0.091 Identities = 23/23 (100%) Strand = Plus / Plus Query: 19 cgagtgcgccaccaccacaaccc 41 ||||||||||||||||||||||| Sbjct: 2868753 cgagtgcgccaccaccacaaccc 2868775 Score = 46.1 bits (23), Expect = 0.091 Identities = 23/23 (100%) Strand = Plus / Plus Query: 19 cgagtgcgccaccaccacaaccc 41 ||||||||||||||||||||||| Sbjct: 2858278 cgagtgcgccaccaccacaaccc 2858300 Score = 46.1 bits (23), Expect = 0.091 Identities = 23/23 (100%) Strand = Plus / Plus Query: 19 cgagtgcgccaccaccacaaccc 41 ||||||||||||||||||||||| Sbjct: 2848684 cgagtgcgccaccaccacaaccc 2848706
>gb|AC105262.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1489_G03, complete sequence Length = 107870 Score = 46.1 bits (23), Expect = 0.091 Identities = 41/47 (87%) Strand = Plus / Minus Query: 363 agctggtcgtggactgtaccggcgagggcgtgtggttcgtggaggcc 409 |||| ||||| ||||| ||||||||||||||| |||||| |||||| Sbjct: 43671 agcttgtcgtcgactgcaccggcgagggcgtgctgttcgtcgaggcc 43625
>dbj|AB045995.1| Macaca fascicularis brain cDNA, clone:QccE-11742 Length = 2355 Score = 46.1 bits (23), Expect = 0.091 Identities = 23/23 (100%) Strand = Plus / Plus Query: 145 ggccccgtcggcgcccacgcccg 167 ||||||||||||||||||||||| Sbjct: 680 ggccccgtcggcgcccacgcccg 702
>ref|XM_475572.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1311 Score = 44.1 bits (22), Expect = 0.36 Identities = 46/54 (85%) Strand = Plus / Plus Query: 355 cggcggcgagctggtcgtggactgtaccggcgagggcgtgtggttcgtggaggc 408 |||||||||| ||| |||| || ||||||||||| | ||||||||||||||| Sbjct: 252 cggcggcgaggtggcggtggcgtgcaccggcgagggggcgtggttcgtggaggc 305
>ref|XM_474776.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1326 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Plus Query: 319 ctactaccccatcgccggccggctcg 344 ||||||||||||||||||||| |||| Sbjct: 210 ctactaccccatcgccggccgactcg 235
>ref|NM_186830.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1739 Score = 44.1 bits (22), Expect = 0.36 Identities = 40/46 (86%) Strand = Plus / Plus Query: 363 agctggtcgtggactgtaccggcgagggcgtgtggttcgtggaggc 408 |||| ||||| ||||| ||||||||||||||| |||||| ||||| Sbjct: 324 agctcgtcgtcgactgcaccggcgagggcgtgatgttcgtcgaggc 369
>emb|AJ786317.1| Streptomyces fradiae putative neomycin biosynthetic gene cluster, strain ATCC 10745 Length = 42149 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 15 ccagcgagtgcgccaccaccac 36 |||||||||||||||||||||| Sbjct: 30490 ccagcgagtgcgccaccaccac 30511
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Plus Query: 319 ctactaccccatcgccggccggctcg 344 ||||||||||||||||||||| |||| Sbjct: 6436850 ctactaccccatcgccggccgactcg 6436875 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 319 ctactaccccatcgccggccg 339 ||||||||||||||||||||| Sbjct: 5117762 ctactaccccatcgccggccg 5117742
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 44.1 bits (22), Expect = 0.36 Identities = 40/46 (86%) Strand = Plus / Minus Query: 363 agctggtcgtggactgtaccggcgagggcgtgtggttcgtggaggc 408 |||| ||||| ||||| ||||||||||||||| |||||| ||||| Sbjct: 8066406 agctcgtcgtcgactgcaccggcgagggcgtgatgttcgtcgaggc 8066361
>dbj|AP003754.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1341_A08 Length = 128955 Score = 44.1 bits (22), Expect = 0.36 Identities = 40/46 (86%) Strand = Plus / Minus Query: 363 agctggtcgtggactgtaccggcgagggcgtgtggttcgtggaggc 408 |||| ||||| ||||| ||||||||||||||| |||||| ||||| Sbjct: 104603 agctcgtcgtcgactgcaccggcgagggcgtgatgttcgtcgaggc 104558
>dbj|AP003738.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1058_C08 Length = 117923 Score = 44.1 bits (22), Expect = 0.36 Identities = 40/46 (86%) Strand = Plus / Minus Query: 363 agctggtcgtggactgtaccggcgagggcgtgtggttcgtggaggc 408 |||| ||||| ||||| ||||||||||||||| |||||| ||||| Sbjct: 178 agctcgtcgtcgactgcaccggcgagggcgtgatgttcgtcgaggc 133
>dbj|AK109746.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-146-F02, full insert sequence Length = 1739 Score = 44.1 bits (22), Expect = 0.36 Identities = 40/46 (86%) Strand = Plus / Plus Query: 363 agctggtcgtggactgtaccggcgagggcgtgtggttcgtggaggc 408 |||| ||||| ||||| ||||||||||||||| |||||| ||||| Sbjct: 324 agctcgtcgtcgactgcaccggcgagggcgtgatgttcgtcgaggc 369
>dbj|AK106972.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-119-G06, full insert sequence Length = 867 Score = 44.1 bits (22), Expect = 0.36 Identities = 46/54 (85%) Strand = Plus / Minus Query: 355 cggcggcgagctggtcgtggactgtaccggcgagggcgtgtggttcgtggaggc 408 |||||||||| ||| |||| || ||||||||||| | ||||||||||||||| Sbjct: 416 cggcggcgaggtggcggtggcgtgcaccggcgagggggcgtggttcgtggaggc 363
>dbj|AK069868.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023039O14, full insert sequence Length = 1730 Score = 44.1 bits (22), Expect = 0.36 Identities = 46/54 (85%) Strand = Plus / Plus Query: 355 cggcggcgagctggtcgtggactgtaccggcgagggcgtgtggttcgtggaggc 408 |||||||||| ||| |||| || ||||||||||| | ||||||||||||||| Sbjct: 352 cggcggcgaggtggcggtggcgtgcaccggcgagggggcgtggttcgtggaggc 405
>emb|AL662965.3|OSJN00167 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0040D17, complete sequence Length = 147548 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Plus Query: 319 ctactaccccatcgccggccggctcg 344 ||||||||||||||||||||| |||| Sbjct: 98999 ctactaccccatcgccggccgactcg 99024
>gb|AC093490.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1127_B08, complete sequence Length = 112268 Score = 44.1 bits (22), Expect = 0.36 Identities = 46/54 (85%) Strand = Plus / Plus Query: 355 cggcggcgagctggtcgtggactgtaccggcgagggcgtgtggttcgtggaggc 408 |||||||||| ||| |||| || ||||||||||| | ||||||||||||||| Sbjct: 50688 cggcggcgaggtggcggtggcgtgcaccggcgagggggcgtggttcgtggaggc 50741
>ref|XM_474639.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1296 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 319 ctactaccccatcgccggccg 339 ||||||||||||||||||||| Sbjct: 207 ctactaccccatcgccggccg 227
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 330 tcgccggccggctcgcgctgt 350 ||||||||||||||||||||| Sbjct: 985354 tcgccggccggctcgcgctgt 985334
>emb|BX640443.1| Bordetella bronchiseptica strain RB50, complete genome; segment 7/16 Length = 346274 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 352 cgacggcggcgagctggtcgt 372 ||||||||||||||||||||| Sbjct: 27757 cgacggcggcgagctggtcgt 27777
>emb|BX640430.1| Bordetella parapertussis strain 12822, complete genome; segment 8/14 Length = 348014 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 352 cgacggcggcgagctggtcgt 372 ||||||||||||||||||||| Sbjct: 291618 cgacggcggcgagctggtcgt 291638
>emb|BX640421.1| Bordetella pertussis strain Tohama I, complete genome; segment 11/12 Length = 349726 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 352 cgacggcggcgagctggtcgt 372 ||||||||||||||||||||| Sbjct: 262704 cgacggcggcgagctggtcgt 262724
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 330 tcgccggccggctcgcgctgt 350 ||||||||||||||||||||| Sbjct: 827893 tcgccggccggctcgcgctgt 827873
>emb|AL731589.3|OSJN00239 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0039G19, complete sequence Length = 144144 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 319 ctactaccccatcgccggccg 339 ||||||||||||||||||||| Sbjct: 94035 ctactaccccatcgccggccg 94015
>emb|AJ132742.1|BBR132742 Bordetella bronchiseptica metY (partial) and hupB genes and ORF1 Length = 2384 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 352 cgacggcggcgagctggtcgt 372 ||||||||||||||||||||| Sbjct: 1067 cgacggcggcgagctggtcgt 1087
>gb|AE004810.1| Pseudomonas aeruginosa PAO1, section 371 of 529 of the complete genome Length = 12119 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 333 ccggccggctcgcgctgtccg 353 ||||||||||||||||||||| Sbjct: 6824 ccggccggctcgcgctgtccg 6844
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 162 cgcccggcggcgagctcccgc 182 ||||||||||||||||||||| Sbjct: 4821571 cgcccggcggcgagctcccgc 4821551
>dbj|AP002481.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0702F03 Length = 141111 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 24 gcgccaccaccacaacccaga 44 ||||||||||||||||||||| Sbjct: 113608 gcgccaccaccacaacccaga 113588
>dbj|AP001539.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0708G02 Length = 168976 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 24 gcgccaccaccacaacccaga 44 ||||||||||||||||||||| Sbjct: 1372 gcgccaccaccacaacccaga 1352
>dbj|AK120816.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023014O08, full insert sequence Length = 1687 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 24 gcgccaccaccacaacccaga 44 ||||||||||||||||||||| Sbjct: 106 gcgccaccaccacaacccaga 126
>gb|U88653.1|PAU88653 Pseudomonas aeruginosa thiolase (phaA) gene, complete cds Length = 2597 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 333 ccggccggctcgcgctgtccg 353 ||||||||||||||||||||| Sbjct: 1335 ccggccggctcgcgctgtccg 1355
>ref|NM_195345.1| Oryza sativa (japonica cultivar-group) putative acetyl transferase (OSJNBa0003P07.2), mRNA Length = 1458 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 319 ctactaccccatcgccggccggct 342 |||||||||| ||||||||||||| Sbjct: 234 ctactaccccgtcgccggccggct 257
>gb|AC093612.18| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0003P07, complete sequence Length = 175116 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 319 ctactaccccatcgccggccggct 342 |||||||||| ||||||||||||| Sbjct: 10276 ctactaccccgtcgccggccggct 10299
>gb|AC145366.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0014O08 map near S2137, complete sequence Length = 134033 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 352 cgacggcggcgagctggtcgtgga 375 ||||||||||||| |||||||||| Sbjct: 94660 cgacggcggcgaggtggtcgtgga 94683
>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome Length = 3696649 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 252 ccgtcgacgaggccgccgag 271 |||||||||||||||||||| Sbjct: 3067379 ccgtcgacgaggccgccgag 3067398
>emb|CR628382.18| Zebrafish DNA sequence from clone DKEY-200C24 in linkage group 19, complete sequence Length = 156223 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 ccaccaccacaacccagatc 46 |||||||||||||||||||| Sbjct: 26155 ccaccaccacaacccagatc 26174
>emb|CR931997.1| Corynebacterium jeikeium K411 complete genome Length = 2462499 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 234 acgtcttcaagggccgcaccgtcg 257 ||||| |||||||||||||||||| Sbjct: 1436363 acgtcctcaagggccgcaccgtcg 1436340
>emb|BX640449.1| Bordetella bronchiseptica strain RB50, complete genome; segment 13/16 Length = 348074 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 283 ggccatcgagcgcgccctggccgc 306 |||||||| ||||||||||||||| Sbjct: 121532 ggccatcgcgcgcgccctggccgc 121555
>emb|BX640444.1| Bordetella bronchiseptica strain RB50, complete genome; segment 8/16 Length = 349008 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 292 gcgcgccctggccgctgcgc 311 |||||||||||||||||||| Sbjct: 347828 gcgcgccctggccgctgcgc 347809
>gb|AC105377.12| Oryza sativa chromosome 10 BAC OSJNBa0034E15 genomic sequence, complete sequence Length = 100285 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 319 ctactaccccatcgccggccggct 342 |||||||||| ||||||||||||| Sbjct: 89981 ctactaccccgtcgccggccggct 90004
>emb|BX640434.1| Bordetella parapertussis strain 12822, complete genome; segment 12/14 Length = 344805 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 283 ggccatcgagcgcgccctggccgc 306 |||||||| ||||||||||||||| Sbjct: 74154 ggccatcgcgcgcgccctggccgc 74177
>emb|BX640427.1| Bordetella parapertussis strain 12822, complete genome; segment 5/14 Length = 348997 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 292 gcgcgccctggccgctgcgc 311 |||||||||||||||||||| Sbjct: 255662 gcgcgccctggccgctgcgc 255643
>emb|BX640420.1| Bordetella pertussis strain Tohama I, complete genome; segment 10/12 Length = 348134 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 283 ggccatcgagcgcgccctggccgc 306 |||||||| ||||||||||||||| Sbjct: 340303 ggccatcgcgcgcgccctggccgc 340326
>emb|BX640415.1| Bordetella pertussis strain Tohama I, complete genome; segment 5/12 Length = 347071 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 292 gcgcgccctggccgctgcgc 311 |||||||||||||||||||| Sbjct: 122938 gcgcgccctggccgctgcgc 122919
>emb|AL939117.1|SCO939117 Streptomyces coelicolor A3(2) complete genome; segment 14/29 Length = 309050 Score = 40.1 bits (20), Expect = 5.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 117 cggtgacgcgggtggcgcagagggtggtggcc 148 |||||| ||||| ||||| ||||||||||||| Sbjct: 164666 cggtgaagcgggaggcgccgagggtggtggcc 164635
>emb|AL939113.1|SCO939113 Streptomyces coelicolor A3(2) complete genome; segment 10/29 Length = 310550 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 246 gccgcaccgtcgacgaggccgccg 269 ||||| |||||||||||||||||| Sbjct: 273143 gccgcgccgtcgacgaggccgccg 273120
>emb|AJ000330.2|PSSTYCATA Pseudomonas sp. Y2 DNA for styrene catabolism genes Length = 29685 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 285 ccatcgagcgcgccctggcc 304 |||||||||||||||||||| Sbjct: 15352 ccatcgagcgcgccctggcc 15371
>gb|AE012085.1| Xanthomonas axonopodis pv. citri str. 306, section 463 of 469 of the complete genome Length = 10029 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 370 cgtggactgtaccggcgagg 389 |||||||||||||||||||| Sbjct: 3301 cgtggactgtaccggcgagg 3282
>ref|XM_683229.1| PREDICTED: Danio rerio similar to protein 4.1R (LOC559842), mRNA Length = 635 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 ccaccaccacaacccagatc 46 |||||||||||||||||||| Sbjct: 430 ccaccaccacaacccagatc 449
>gb|AF012100.2|AF012100 Pseudomonas aeruginosa PtxR (ptxR) and PtxS (ptxS) genes, complete cds and ketogluconate utilization operon gene, complete sequence Length = 7447 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 124 gcgggtggcgcagagggtgg 143 |||||||||||||||||||| Sbjct: 2930 gcgggtggcgcagagggtgg 2911
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 247 ccgcaccgtcgacgaggccgccga 270 ||||||||||||||||||| |||| Sbjct: 3974754 ccgcaccgtcgacgaggcctccga 3974777
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 247 ccgcaccgtcgacgaggccgccga 270 ||||||||||||||||||| |||| Sbjct: 27849478 ccgcaccgtcgacgaggcctccga 27849455 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 352 cgacggcggcgagctggtcgtgga 375 ||||||||||||| |||||||||| Sbjct: 8683494 cgacggcggcgaggtggtcgtgga 8683517
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 319 ctactaccccatcgccggccggct 342 |||||||||| ||||||||||||| Sbjct: 6292423 ctactaccccgtcgccggccggct 6292446
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 247 ccgcaccgtcgacgaggccgccga 270 ||||||||||||||||||| |||| Sbjct: 19851014 ccgcaccgtcgacgaggcctccga 19851037
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 243 agggccgcaccgtcgacgaggccg 266 |||||||||||||||||| ||||| Sbjct: 5106757 agggccgcaccgtcgacgcggccg 5106780
>gb|AE004651.1| Pseudomonas aeruginosa PAO1, section 212 of 529 of the complete genome Length = 10728 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 124 gcgggtggcgcagagggtgg 143 |||||||||||||||||||| Sbjct: 10423 gcgggtggcgcagagggtgg 10404
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 279 tcaaggccatcgagcgcgcc 298 |||||||||||||||||||| Sbjct: 4884397 tcaaggccatcgagcgcgcc 4884416 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 248 cgcaccgtcgacgaggccgccgag 271 |||||||||| ||||||||||||| Sbjct: 141964 cgcaccgtcgccgaggccgccgag 141987
>dbj|AP005735.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBb0034B12 Length = 124083 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 247 ccgcaccgtcgacgaggccgccga 270 ||||||||||||||||||| |||| Sbjct: 75454 ccgcaccgtcgacgaggcctccga 75477
>dbj|AK100207.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023042A21, full insert sequence Length = 2209 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 319 ctactaccccatcgccggccggct 342 |||||||||| ||||||||||||| Sbjct: 658 ctactaccccgtcgccggccggct 681
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 249 gcaccgtcgacgaggccgcc 268 |||||||||||||||||||| Sbjct: 2520310 gcaccgtcgacgaggccgcc 2520291
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome Length = 3551823 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 189 ggctcgaccgctaccccacgcagc 212 ||||||||| |||||||||||||| Sbjct: 2733183 ggctcgaccactaccccacgcagc 2733160
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 319 ctactaccccatcgccggccggct 342 |||||||||| ||||||||||||| Sbjct: 6294009 ctactaccccgtcgccggccggct 6294032
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 247 ccgcaccgtcgacgaggccgccga 270 ||||||||||||||||||| |||| Sbjct: 27873466 ccgcaccgtcgacgaggcctccga 27873443 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 352 cgacggcggcgagctggtcgtgga 375 ||||||||||||| |||||||||| Sbjct: 8754257 cgacggcggcgaggtggtcgtgga 8754280
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 247 ccgcaccgtcgacgaggccgccga 270 ||||||||||||||||||| |||| Sbjct: 3974730 ccgcaccgtcgacgaggcctccga 3974753
>emb|AL731882.2|CNS08C8M Oryza sativa chromosome 12, . BAC OSJNBb0028H07 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 132682 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 247 ccgcaccgtcgacgaggccgccga 270 ||||||||||||||||||| |||| Sbjct: 11164 ccgcaccgtcgacgaggcctccga 11187
>emb|AL732376.2|CNS08C8Z Oryza sativa chromosome 12, . BAC OSJNBa0086B10 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 152090 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 247 ccgcaccgtcgacgaggccgccga 270 ||||||||||||||||||| |||| Sbjct: 136730 ccgcaccgtcgacgaggcctccga 136753 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,626,546 Number of Sequences: 3902068 Number of extensions: 2626546 Number of successful extensions: 61300 Number of sequences better than 10.0: 89 Number of HSP's better than 10.0 without gapping: 95 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 57860 Number of HSP's gapped (non-prelim): 3441 length of query: 418 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 396 effective length of database: 17,147,199,772 effective search space: 6790291109712 effective search space used: 6790291109712 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
