>gb|BT019246.1| Zea mays clone Contig919.F mRNA sequence
          Length = 1035

 Score = 71.9 bits (36), Expect = 7e-10
 Identities = 48/52 (92%)
 Strand = Plus / Minus

                                                                
Query: 99   ccatggtgaagctagcgacggcgcgggactgccgcgcgtacagcctcggcgc 150
            ||||||||||||| ||||||||||| || |||||||| ||||||||||||||
Sbjct: 1008 ccatggtgaagctggcgacggcgcgcgagtgccgcgcatacagcctcggcgc 957



 Score = 44.1 bits (22), Expect = 0.17
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 179 cggngggagtacatcaacgccgggg 203
           ||| |||||||||||||||||||||
Sbjct: 925 cggtgggagtacatcaacgccgggg 901

>gb|AC098598.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1007_H05,
             complete sequence
          Length = 108479

 Score = 50.1 bits (25), Expect = 0.003
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                         
Query: 176   cggcggngggagtacatcaacgccgggg 203
             |||||| |||||||||||||||||||||
Sbjct: 18041 cggcggtgggagtacatcaacgccgggg 18068

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 50.1 bits (25), Expect = 0.003
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                            
Query: 176      cggcggngggagtacatcaacgccgggg 203
                |||||| |||||||||||||||||||||
Sbjct: 29007986 cggcggtgggagtacatcaacgccgggg 29008013

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 46.1 bits (23), Expect = 0.042
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                      
Query: 101     atggtgaagctagcgacggcgcgggactgccgcgcgtac 139
               ||||||||||| ||||||||| |||| ||||| ||||||
Sbjct: 8870566 atggtgaagctggcgacggcgagggagtgccgggcgtac 8870528



 Score = 42.1 bits (21), Expect = 0.66
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 183     gggagtacatcaacgccgggg 203
               |||||||||||||||||||||
Sbjct: 8870490 gggagtacatcaacgccgggg 8870470

>dbj|AP004801.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0613F08
          Length = 142937

 Score = 46.1 bits (23), Expect = 0.042
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                    
Query: 101   atggtgaagctagcgacggcgcgggactgccgcgcgtac 139
             ||||||||||| ||||||||| |||| ||||| ||||||
Sbjct: 75584 atggtgaagctggcgacggcgagggagtgccgggcgtac 75546



 Score = 42.1 bits (21), Expect = 0.66
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 183   gggagtacatcaacgccgggg 203
             |||||||||||||||||||||
Sbjct: 75508 gggagtacatcaacgccgggg 75488

>dbj|AK103494.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033130P11, full
           insert sequence
          Length = 1159

 Score = 46.1 bits (23), Expect = 0.042
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                  
Query: 101 atggtgaagctagcgacggcgcgggactgccgcgcgtac 139
           ||||||||||| ||||||||| |||| ||||| ||||||
Sbjct: 54  atggtgaagctggcgacggcgagggagtgccgggcgtac 92



 Score = 42.1 bits (21), Expect = 0.66
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 183 gggagtacatcaacgccgggg 203
           |||||||||||||||||||||
Sbjct: 130 gggagtacatcaacgccgggg 150

>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 44.1 bits (22), Expect = 0.17
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                         
Query: 141     gcctcggcgcggccggcggcgagacg 166
               |||||||||||| |||||||||||||
Sbjct: 2722036 gcctcggcgcggtcggcggcgagacg 2722061

>gb|DQ337730.1| Uncultured bacterium clone Bsedi_nirK-10 NirK (nirK) gene, partial
           cds
          Length = 473

 Score = 42.1 bits (21), Expect = 0.66
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 8   ccagatcgccgtgtccgccga 28
           |||||||||||||||||||||
Sbjct: 331 ccagatcgccgtgtccgccga 311

>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 42.1 bits (21), Expect = 0.66
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 142     cctcggcgcggccggcggcgagacg 166
               ||||||||||||||||| |||||||
Sbjct: 3983045 cctcggcgcggccggcgtcgagacg 3983069



 Score = 40.1 bits (20), Expect = 2.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 145     cggcgcggccggcggcgagacgtggcgc 172
               ||||||||||||||||| | ||||||||
Sbjct: 1070733 cggcgcggccggcggcgcggcgtggcgc 1070760

>gb|AF079139.1|AF079139 Streptomyces venezuelae pikCD operon, complete sequence
          Length = 4342

 Score = 42.1 bits (21), Expect = 0.66
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 142  cctcggcgcggccggcggcga 162
            |||||||||||||||||||||
Sbjct: 2245 cctcggcgcggccggcggcga 2265

>ref|NM_192227.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 915

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 132 gcgcgtacagcctcggcgcg 151
           ||||||||||||||||||||
Sbjct: 547 gcgcgtacagcctcggcgcg 528

>gb|AC148880.2| Chlamydomonas reinhardtii clone cr-40F11, complete sequence
          Length = 56458

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 142   cctcggcgcggccggcggcg 161
             ||||||||||||||||||||
Sbjct: 46085 cctcggcgcggccggcggcg 46104

>ref|XM_362937.1| Magnaporthe grisea 70-15 hypothetical protein (MG08500.4) partial cds
          Length = 1572

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 150  cggccggcggcgagacgtgg 169
            ||||||||||||||||||||
Sbjct: 1190 cggccggcggcgagacgtgg 1209

>gb|AY195830.1| Uncultured bacterium clone M305044 NirK (nirK) gene, partial cds
          Length = 306

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 12  atcgccgtgtccgccgacca 31
           ||||||||||||||||||||
Sbjct: 303 atcgccgtgtccgccgacca 284

>emb|CR555306.1| Azoarcus sp. EbN1 complete genome
          Length = 4296230

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 141     gcctcggcgcggccggcggc 160
               ||||||||||||||||||||
Sbjct: 1953142 gcctcggcgcggccggcggc 1953161

>gb|AY179964.1| Stenotrophomonas maltophilia phosphoglucomutase (spgM) gene,
           complete cds
          Length = 1983

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 142 cctcggcgcggccggcggcg 161
           ||||||||||||||||||||
Sbjct: 840 cctcggcgcggccggcggcg 859

>gb|CP000137.1| Rhizobium etli CFN 42 plasmid p42e, complete sequence
          Length = 505334

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 35     cttcaactcctccaccgcag 54
              ||||||||||||||||||||
Sbjct: 492881 cttcaactcctccaccgcag 492862

>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 139     cagcctcggcgcggccggcg 158
               ||||||||||||||||||||
Sbjct: 1543623 cagcctcggcgcggccggcg 1543604

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 132      gcgcgtacagcctcggcgcg 151
                ||||||||||||||||||||
Sbjct: 29146637 gcgcgtacagcctcggcgcg 29146618

>dbj|AP003245.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0421H07
          Length = 158126

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 132    gcgcgtacagcctcggcgcg 151
              ||||||||||||||||||||
Sbjct: 107003 gcgcgtacagcctcggcgcg 106984

>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome
          Length = 3147090

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 142    cctcggcgcggccggcggcg 161
              ||||||||||||||||||||
Sbjct: 191508 cctcggcgcggccggcggcg 191489

>dbj|AK099917.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013116I02, full
           insert sequence
          Length = 1430

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 132 gcgcgtacagcctcggcgcg 151
           ||||||||||||||||||||
Sbjct: 578 gcgcgtacagcctcggcgcg 559

>dbj|AK069643.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023027O19, full
           insert sequence
          Length = 1452

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 132 gcgcgtacagcctcggcgcg 151
           ||||||||||||||||||||
Sbjct: 75  gcgcgtacagcctcggcgcg 56


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,345,427
Number of Sequences: 3902068
Number of extensions: 1345427
Number of successful extensions: 105513
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 103762
Number of HSP's gapped (non-prelim): 1751
length of query: 206
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 184
effective length of database: 17,147,199,772
effective search space: 3155084758048
effective search space used: 3155084758048
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)