>MPA51_PHAAQ (P56164) Major pollen allergen Pha a 5.1 precursor (Pha A 5) (Clone|
           28)
          Length = 320

 Score = 28.9 bits (63), Expect = 5.1
 Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 3/43 (6%)
 Frame = +1

Query: 67  RFTQRLLL---LAASSSIPNPPADEEPPMLHGPKAAPRMTRRS 186
           ++T  L L   L A  + P PP    PP+L  P+A  + T  S
Sbjct: 5   KYTMALFLAVALVAGPAAPTPPTPRTPPLLPPPRARDKATLTS 47

>AROA_RHILO (Q98CC1) 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19)|
           (5-enolpyruvylshikimate-3-phosphate synthase) (EPSP
           synthase) (EPSPS)
          Length = 452

 Score = 28.9 bits (63), Expect = 5.1
 Identities = 14/27 (51%), Positives = 15/27 (55%)
 Frame = +1

Query: 121 PADEEPPMLHGPKAAPRMTRRSPCRSA 201
           P D  P  LHGPK A  +T R P  SA
Sbjct: 149 PGDRMPITLHGPKHAAPITYRVPMASA 175

>RARB_MOUSE (P22605) Retinoic acid receptor beta (RAR-beta)|
          Length = 482

 Score = 25.8 bits (55), Expect(2) = 8.5
 Identities = 11/28 (39%), Positives = 14/28 (50%)
 Frame = +3

Query: 45  LRLPLSRSIHTEAPPPGCFFLNPQSAGR 128
           L LP    +H   PP GC   +P S G+
Sbjct: 36  LSLPPLHGLHGHPPPSGCSTPSPASVGQ 63



 Score = 20.8 bits (42), Expect(2) = 8.5
 Identities = 6/16 (37%), Positives = 11/16 (68%)
 Frame = +1

Query: 109 IPNPPADEEPPMLHGP 156
           +P+PP+   PP ++ P
Sbjct: 99  VPSPPSPLPPPRVYKP 114

>DREB_RAT (Q07266) Drebrin (Developmentally-regulated brain protein)|
          Length = 706

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 12/34 (35%), Positives = 17/34 (50%)
 Frame = +1

Query: 100 SSSIPNPPADEEPPMLHGPKAAPRMTRRSPCRSA 201
           +SS P PP    PP     ++APR+     C+ A
Sbjct: 405 TSSQPPPPPPPPPPAQEAQESAPRLDGEEVCKEA 438


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 43,944,214
Number of Sequences: 219361
Number of extensions: 602834
Number of successful extensions: 2426
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2294
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2421
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2278320915
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)