>CSX1_SCHPO (O13759) RNA-binding post-transcriptional regulator csx1|
          Length = 632

 Score = 32.7 bits (73), Expect = 0.48
 Identities = 11/31 (35%), Positives = 19/31 (61%)
 Frame = +1

Query: 361 TIWVGDLQYWMDENYLHSCFGPSGEVVTIKL 453
           T+W+GDL+ WMD  ++   +    E V +K+
Sbjct: 86  TLWMGDLEPWMDATFIQQLWASLNEPVNVKV 116

>PABP2_ARATH (P42731) Polyadenylate-binding protein 2 (Poly(A)-binding protein|
           2) (PABP 2)
          Length = 629

 Score = 32.3 bits (72), Expect = 0.63
 Identities = 15/52 (28%), Positives = 26/52 (50%)
 Frame = +1

Query: 298 ASVTXXXXXXXXXXXXXDENRTIWVGDLQYWMDENYLHSCFGPSGEVVTIKL 453
           A+VT               N +++VGDL + + ++ L   FG  G VVT+++
Sbjct: 16  AAVTSAPATSGGATATQFGNTSLYVGDLDFNVTDSQLFDAFGQMGTVVTVRV 67

>YG41_SCHPO (O60176) Hypothetical RNA-binding protein C23E6.01c in chromosome|
           II
          Length = 473

 Score = 31.2 bits (69), Expect = 1.4
 Identities = 10/34 (29%), Positives = 21/34 (61%)
 Frame = +1

Query: 352 ENRTIWVGDLQYWMDENYLHSCFGPSGEVVTIKL 453
           +  T+W+G+L+ W+ E ++   +   G+ V +KL
Sbjct: 91  QKTTLWMGELEPWVTEAFIQQVWNTLGKAVKVKL 124

>DAZ3_HUMAN (Q9NR90) Deleted in azoospermia protein 3|
          Length = 486

 Score = 30.4 bits (67), Expect = 2.4
 Identities = 13/31 (41%), Positives = 19/31 (61%)
 Frame = +1

Query: 361 TIWVGDLQYWMDENYLHSCFGPSGEVVTIKL 453
           T++VG +   MDE  + SCFG  G V  +K+
Sbjct: 41  TVFVGGIDARMDETEIGSCFGRYGSVKEVKI 71

>DAZ1_HUMAN (Q9NQZ3) Deleted in azoospermia protein 1|
          Length = 744

 Score = 30.4 bits (67), Expect = 2.4
 Identities = 13/31 (41%), Positives = 19/31 (61%)
 Frame = +1

Query: 361 TIWVGDLQYWMDENYLHSCFGPSGEVVTIKL 453
           T++VG +   MDE  + SCFG  G V  +K+
Sbjct: 371 TVFVGGIDARMDETEIGSCFGRYGSVKEVKI 401



 Score = 30.4 bits (67), Expect = 2.4
 Identities = 13/31 (41%), Positives = 19/31 (61%)
 Frame = +1

Query: 361 TIWVGDLQYWMDENYLHSCFGPSGEVVTIKL 453
           T++VG +   MDE  + SCFG  G V  +K+
Sbjct: 206 TVFVGGIDARMDETEIGSCFGRYGSVKEVKI 236



 Score = 30.4 bits (67), Expect = 2.4
 Identities = 13/31 (41%), Positives = 19/31 (61%)
 Frame = +1

Query: 361 TIWVGDLQYWMDENYLHSCFGPSGEVVTIKL 453
           T++VG +   MDE  + SCFG  G V  +K+
Sbjct: 41  TVFVGGIDARMDETEIGSCFGRYGSVKEVKI 71

>DAZ2_HUMAN (Q13117) Deleted in azoospermia protein 2|
          Length = 558

 Score = 30.4 bits (67), Expect = 2.4
 Identities = 13/31 (41%), Positives = 19/31 (61%)
 Frame = +1

Query: 361 TIWVGDLQYWMDENYLHSCFGPSGEVVTIKL 453
           T++VG +   MDE  + SCFG  G V  +K+
Sbjct: 41  TVFVGGIDARMDETEIGSCFGRYGSVKEVKI 71

>DAZ4_HUMAN (Q86SG3) Deleted in azoospermia protein 4|
          Length = 579

 Score = 30.4 bits (67), Expect = 2.4
 Identities = 13/31 (41%), Positives = 19/31 (61%)
 Frame = +1

Query: 361 TIWVGDLQYWMDENYLHSCFGPSGEVVTIKL 453
           T++VG +   MDE  + SCFG  G V  +K+
Sbjct: 206 TVFVGGIDARMDETEIGSCFGRYGSVKEVKI 236



 Score = 30.4 bits (67), Expect = 2.4
 Identities = 13/31 (41%), Positives = 19/31 (61%)
 Frame = +1

Query: 361 TIWVGDLQYWMDENYLHSCFGPSGEVVTIKL 453
           T++VG +   MDE  + SCFG  G V  +K+
Sbjct: 41  TVFVGGIDARMDETEIGSCFGRYGSVKEVKI 71

>PPIE_DROME (Q9V3G3) Peptidyl-prolyl cis-trans isomerase E (EC 5.2.1.8) (PPIase|
           E) (Rotamase E) (Cyclophilin E) (Cyclophilin 33)
          Length = 300

 Score = 28.5 bits (62), Expect = 9.1
 Identities = 13/37 (35%), Positives = 23/37 (62%)
 Frame = +1

Query: 349 DENRTIWVGDLQYWMDENYLHSCFGPSGEVVTIKLSA 459
           ++ RTI+VG L   + E  L++ F P G++  I++ A
Sbjct: 3   NDKRTIYVGGLADEVTERLLNNAFIPFGDIADIQMPA 39

>NCBP2_XENLA (P52299) Nuclear cap binding protein subunit 2 (20 kDa nuclear cap|
           binding protein) (NCBP 20 kDa subunit) (CBP20)
           (Fragment)
          Length = 148

 Score = 28.5 bits (62), Expect = 9.1
 Identities = 11/29 (37%), Positives = 18/29 (62%)
 Frame = +1

Query: 361 TIWVGDLQYWMDENYLHSCFGPSGEVVTI 447
           T++VG+L ++  E  +H  F  SG+V  I
Sbjct: 33  TLYVGNLSFYTTEEQIHELFSKSGDVKRI 61


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 30,727,043
Number of Sequences: 219361
Number of extensions: 334851
Number of successful extensions: 704
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 698
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 704
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3072927439
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)