ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast78f09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK069926.1| Oryza sativa (japonica cultivar-group) cDNA clon... 153 6e-34
2dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 139 9e-30
3emb|AL606448.3|OSJN00013 Oryza sativa genomic DNA, chromosome 4,... 139 9e-30
4dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 115 1e-22
5dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 115 1e-22
6dbj|AP006068.3| Oryza sativa (japonica cultivar-group) genomic D... 115 1e-22
7dbj|AP005755.2| Oryza sativa (japonica cultivar-group) genomic D... 115 1e-22
8dbj|AP006849.2| Oryza sativa (japonica cultivar-group) genomic D... 115 1e-22
9dbj|AK067260.1| Oryza sativa (japonica cultivar-group) cDNA clon... 115 1e-22
10dbj|AK060597.1| Oryza sativa (japonica cultivar-group) cDNA clon... 115 1e-22
11gb|AY110611.1| Zea mays CL773_-1 mRNA sequence 111 2e-21
12ref|XM_466313.1| Oryza sativa (japonica cultivar-group), mRNA 109 8e-21
13gb|AY109533.1| Zea mays CL775_1 mRNA sequence 103 5e-19
14gb|BT018995.1| Zea mays clone Contig483.F mRNA sequence 86 1e-13
15gb|AY104980.1| Zea mays PCO111857 mRNA sequence 86 1e-13
16gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 78 3e-11
17gb|AC090484.4| Genomic sequence for Oryza sativa, Nipponbare str... 78 3e-11
18dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 78 3e-11
19gb|AC126221.2| Oryza sativa (japonica cultivar-group) chromosome... 78 3e-11
20gb|AY109704.1| Zea mays CL776_1 mRNA sequence 78 3e-11
21dbj|AK104916.1| Oryza sativa (japonica cultivar-group) cDNA clon... 74 5e-10
22dbj|AK065337.1| Oryza sativa (japonica cultivar-group) cDNA clon... 74 5e-10
23gb|AC158180.2| Selaginella moellendorffii chromosome JGIASXY-5A1... 64 4e-07
24gb|AY107267.1| Zea mays PCO073795 mRNA sequence 64 4e-07
25ref|NM_184951.1| Oryza sativa (japonica cultivar-group), mRNA 60 7e-06
26gb|AC084319.5|AC084319 Oryza sativa chromosome 3 BAC OSJNBa0004B... 60 7e-06
27dbj|AK119985.1| Oryza sativa (japonica cultivar-group) cDNA clon... 60 7e-06
28dbj|AK101593.1| Oryza sativa (japonica cultivar-group) cDNA clon... 60 7e-06
29ref|XM_480466.1| Oryza sativa (japonica cultivar-group), mRNA 54 4e-04
30dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 54 4e-04
31dbj|AP005531.3| Oryza sativa (japonica cultivar-group) genomic D... 54 4e-04
32dbj|AP005505.3| Oryza sativa (japonica cultivar-group) genomic D... 54 4e-04
33gb|AF402959.1| Oryza sativa chromosome 4 clones V17 and 214, gen... 52 0.002
34ref|XM_473964.1| Oryza sativa (japonica cultivar-group), predic... 52 0.002
35gb|BT018852.1| Zea mays clone EL01N0555H08.d mRNA sequence 52 0.002
36emb|AL606669.4|OSJN00106 Oryza sativa genomic DNA, chromosome 4,... 52 0.002
37emb|AL606645.2|OSJN00079 Oryza sativa genomic DNA, chromosome 4,... 52 0.002
38dbj|AK120834.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 0.002
39gb|AY109669.1| Zea mays CL866_1 mRNA sequence 52 0.002
40gb|AY109460.1| Zea mays CL862_1 mRNA sequence 52 0.002
41gb|AY107556.1| Zea mays PCO141359 mRNA sequence 52 0.002
42dbj|AK072804.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.007
43ref|XM_478418.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.41
44ref|XM_478419.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.41
45gb|BT009008.1| Triticum aestivum clone wdk3c.pk0003.a5:fis, full... 44 0.41
46dbj|AB236792.1| Trifolium pratense RNA for putative DNA binding ... 44 0.41
47ref|XM_680515.1| PREDICTED: Danio rerio hypothetical protein LOC... 44 0.41
48dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.41
49dbj|AP005103.5| Oryza sativa (japonica cultivar-group) genomic D... 44 0.41
50dbj|AP005320.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.41
51dbj|AK062798.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.41
52gb|AC163015.4| Mus musculus chromosome 3, clone RP23-149I5, comp... 42 1.6
53gb|AC100511.12| Mus musculus chromosome 3, clone RP23-144N19, co... 42 1.6
54emb|AJ344538.1|NTA344538 Nicotiana tabacum mRNA for nucleic acid... 42 1.6
55dbj|AP005194.2| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
56dbj|AK062400.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.6
57gb|AY109586.1| Zea mays CL860_-1 mRNA sequence 42 1.6
58gb|AC004169.3|AC004169 Homo sapiens chromosome 4 clone C0236G06 ... 42 1.6
59gb|AC027700.11| Mus musculus chromosome 10, clone RP23-145G7, co... 42 1.6
60gb|CP000081.1| Leishmania major chromosome 35, complete sequence 40 6.3
61gb|AC096938.8| Rattus norvegicus 16 BAC CH230-49B24 (Children's ... 40 6.3
62ref|NM_005358.3| Homo sapiens LIM domain 7 (LMO7), mRNA 40 6.3
63gb|AC091262.8| Mus musculus chromosome 9, clone RP23-38G1, compl... 40 6.3
64ref|XM_838502.1| Leishmania major strain Friedlin DNA replicatio... 40 6.3
65ref|XM_534148.2| PREDICTED: Canis familiaris similar to LIM doma... 40 6.3
66gb|AC116997.3| Mus musculus BAC clone RP23-8J15 from chromosome ... 40 6.3
67gb|AC129544.7| Mus musculus chromosome 12, clone RP23-258H6, com... 40 6.3
68emb|AL590809.5| Human DNA sequence from clone RP11-733H21 on chr... 40 6.3
69emb|AL359392.9| Human DNA sequence from clone RP11-332E3 on chro... 40 6.3
70emb|AL136984.20| Human DNA sequence from clone RP11-52A20 on chr... 40 6.3
71gb|AC121252.4| Homo sapiens chromosome 3 clone RP11-148G20, comp... 40 6.3
72emb|BX640441.1| Bordetella bronchiseptica strain RB50, complete ... 40 6.3
73emb|BX640429.1| Bordetella parapertussis strain 12822, complete ... 40 6.3
74emb|BX323869.7| Zebrafish DNA sequence from clone CH211-206K18 i... 40 6.3
75emb|CR857292.1| Pongo pygmaeus mRNA; cDNA DKFZp469O2221 (from cl... 40 6.3
76gb|AF330045.1| Homo sapiens LIM domain only 7 (LMO7) mRNA, compl... 40 6.3
77dbj|AK092052.1| Homo sapiens cDNA FLJ34733 fis, clone MESAN20069... 40 6.3
78dbj|AK055465.1| Homo sapiens cDNA FLJ30903 fis, clone FEBRA20057... 40 6.3
79gb|AF330146.1|AF330146 Gallus gallus integrin alpha 3A subunit c... 40 6.3
80gb|AC134241.2| Oryza sativa (japonica cultivar-group) chromosome... 40 6.3
81gb|AC135158.2| Oryza sativa (japonica cultivar-group) chromosome... 40 6.3
82dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.3
83ref|NM_204146.1| Gallus gallus integrin, alpha 3 (antigen CD49C,... 40 6.3
84gb|AC005923.2| Homo sapiens 3 PAC RP4-751E10 (Roswell Park Cance... 40 6.3
85dbj|AP004730.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.3
86dbj|AP004328.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.3
87dbj|AK074265.1| Homo sapiens cDNA FLJ23685 fis, clone HEP10068, ... 40 6.3
88gb|AC004893.1|AC004893 Homo sapiens PAC clone RP4-808A1 from 7q2... 40 6.3
89emb|BX510353.10| Zebrafish DNA sequence from clone DKEY-201E17 i... 40 6.3
90gb|AF144237.1|AF144237 Homo sapiens LOMP protein mRNA, complete cds 40 6.3
91emb|AJ242525.1|CRE242525 Chlamydomonas reinhardtii partial dhc10... 40 6.3
92dbj|AP004926.1| Lotus japonicus genomic DNA, chromosome 4, clone... 40 6.3
93dbj|AB020665.2| Homo sapiens mRNA for KIAA0858 protein, partial cds 40 6.3 
>dbj|AK069926.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023036B01, full
           insert sequence
          Length = 1632

 Score =  153 bits (77), Expect = 6e-34
 Identities = 120/133 (90%), Gaps = 1/133 (0%)
 Strand = Plus / Plus

                                                                       
Query: 328 ggatccggcgggaacggaggtgacgagaaccggacgatctgggtcggcgacctccagtac 387
           |||||||||||||||||  | || ||||||  |||||||||||| |||||||||||||| 
Sbjct: 357 ggatccggcgggaacgggtgcgaggagaacaagacgatctgggttggcgacctccagtat 416

                                                                       
Query: 388 tggatggacgagaactacctccacagctgcttcggccccagcggcgaggtcgtgacgat- 446
           ||||||||||||||||||||||||||||| ||||| |||||||||||||| |||||||| 
Sbjct: 417 tggatggacgagaactacctccacagctgtttcggacccagcggcgaggtagtgacgata 476

                        
Query: 447 taagttatccgca 459
            ||||||||||||
Sbjct: 477 aaagttatccgca 489
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  139 bits (70), Expect = 9e-30
 Identities = 100/110 (90%)
 Strand = Plus / Plus

                                                                            
Query: 328      ggatccggcgggaacggaggtgacgagaaccggacgatctgggtcggcgacctccagtac 387
                |||||||||||||||||  | || ||||||  |||||||||||| |||||||||||||| 
Sbjct: 22389506 ggatccggcgggaacgggtgcgaggagaacaagacgatctgggttggcgacctccagtat 22389565

                                                                  
Query: 388      tggatggacgagaactacctccacagctgcttcggccccagcggcgaggt 437
                ||||||||||||||||||||||||||||| ||||| ||||||||||||||
Sbjct: 22389566 tggatggacgagaactacctccacagctgtttcggacccagcggcgaggt 22389615



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 53/62 (85%)
 Strand = Plus / Plus

                                                                            
Query: 360      gacgatctgggtcggcgacctccagtactggatggacgagaactacctccacagctgctt 419
                |||| ||||| |||||||||| |||  |||||||||||||| |||| || ||| ||||||
Sbjct: 31853713 gacgctctggatcggcgacctgcagccctggatggacgagagctacatctacaactgctt 31853772

                  
Query: 420      cg 421
                ||
Sbjct: 31853773 cg 31853774
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>emb|AL606448.3|OSJN00013 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0064H22,
              complete sequence
          Length = 147214

 Score =  139 bits (70), Expect = 9e-30
 Identities = 100/110 (90%)
 Strand = Plus / Plus

                                                                          
Query: 328    ggatccggcgggaacggaggtgacgagaaccggacgatctgggtcggcgacctccagtac 387
              |||||||||||||||||  | || ||||||  |||||||||||| |||||||||||||| 
Sbjct: 140412 ggatccggcgggaacgggtgcgaggagaacaagacgatctgggttggcgacctccagtat 140471

                                                                
Query: 388    tggatggacgagaactacctccacagctgcttcggccccagcggcgaggt 437
              ||||||||||||||||||||||||||||| ||||| ||||||||||||||
Sbjct: 140472 tggatggacgagaactacctccacagctgtttcggacccagcggcgaggt 140521
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score =  115 bits (58), Expect = 1e-22
 Identities = 70/74 (94%)
 Strand = Plus / Plus

                                                                            
Query: 364      atctgggtcggcgacctccagtactggatggacgagaactacctccacagctgcttcggc 423
                |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 17444594 atctgggtcggcgacctccactactggatggacgagaactacctccacagctgcttcggc 17444653

                              
Query: 424      cccagcggcgaggt 437
                  || |||||||||
Sbjct: 17444654 tacaccggcgaggt 17444667
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  115 bits (58), Expect = 1e-22
 Identities = 82/90 (91%)
 Strand = Plus / Plus

                                                                            
Query: 349      gacgagaaccggacgatctgggtcggcgacctccagtactggatggacgagaactacctc 408
                ||||||||||||||||| |||||||| || |||||||||||||||||||||  |||||| 
Sbjct: 21616069 gacgagaaccggacgatttgggtcggggatctccagtactggatggacgagggctacctg 21616128

                                              
Query: 409      cacagctgcttcggccccagcggcgaggtc 438
                |||| |||||| ||||||||||||||||||
Sbjct: 21616129 cacaactgctttggccccagcggcgaggtc 21616158
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>dbj|AP006068.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0020D05
          Length = 158760

 Score =  115 bits (58), Expect = 1e-22
 Identities = 82/90 (91%)
 Strand = Plus / Plus

                                                                          
Query: 349    gacgagaaccggacgatctgggtcggcgacctccagtactggatggacgagaactacctc 408
              ||||||||||||||||| |||||||| || |||||||||||||||||||||  |||||| 
Sbjct: 105019 gacgagaaccggacgatttgggtcggggatctccagtactggatggacgagggctacctg 105078

                                            
Query: 409    cacagctgcttcggccccagcggcgaggtc 438
              |||| |||||| ||||||||||||||||||
Sbjct: 105079 cacaactgctttggccccagcggcgaggtc 105108
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>dbj|AP005755.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
            clone:OSJNBb0019B14
          Length = 127570

 Score =  115 bits (58), Expect = 1e-22
 Identities = 70/74 (94%)
 Strand = Plus / Plus

                                                                        
Query: 364  atctgggtcggcgacctccagtactggatggacgagaactacctccacagctgcttcggc 423
            |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 8772 atctgggtcggcgacctccactactggatggacgagaactacctccacagctgcttcggc 8831

                          
Query: 424  cccagcggcgaggt 437
              || |||||||||
Sbjct: 8832 tacaccggcgaggt 8845
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>dbj|AP006849.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:OSJNBa0054F02
          Length = 180651

 Score =  115 bits (58), Expect = 1e-22
 Identities = 70/74 (94%)
 Strand = Plus / Plus

                                                                          
Query: 364    atctgggtcggcgacctccagtactggatggacgagaactacctccacagctgcttcggc 423
              |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 168507 atctgggtcggcgacctccactactggatggacgagaactacctccacagctgcttcggc 168566

                            
Query: 424    cccagcggcgaggt 437
                || |||||||||
Sbjct: 168567 tacaccggcgaggt 168580
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>dbj|AK067260.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013096N13, full
           insert sequence
          Length = 1615

 Score =  115 bits (58), Expect = 1e-22
 Identities = 70/74 (94%)
 Strand = Plus / Plus

                                                                       
Query: 364 atctgggtcggcgacctccagtactggatggacgagaactacctccacagctgcttcggc 423
           |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 351 atctgggtcggcgacctccactactggatggacgagaactacctccacagctgcttcggc 410

                         
Query: 424 cccagcggcgaggt 437
             || |||||||||
Sbjct: 411 tacaccggcgaggt 424
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>dbj|AK060597.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-G08, full
           insert sequence
          Length = 1356

 Score =  115 bits (58), Expect = 1e-22
 Identities = 70/74 (94%)
 Strand = Plus / Plus

                                                                       
Query: 364 atctgggtcggcgacctccagtactggatggacgagaactacctccacagctgcttcggc 423
           |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 95  atctgggtcggcgacctccactactggatggacgagaactacctccacagctgcttcggc 154

                         
Query: 424 cccagcggcgaggt 437
             || |||||||||
Sbjct: 155 tacaccggcgaggt 168
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>gb|AY110611.1| Zea mays CL773_-1 mRNA sequence
          Length = 1771

 Score =  111 bits (56), Expect = 2e-21
 Identities = 87/96 (90%), Gaps = 1/96 (1%)
 Strand = Plus / Plus

                                                                       
Query: 365 tctgggtcggcgacctccagtactggatggacgagaactacctccacagctgcttcggcc 424
           ||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| 
Sbjct: 448 tctgggtcggcgacctccattactggatggacgagaactacctacacagctgcttcggct 507

                                               
Query: 425 ccagcggcgaggtcgtgacgat-taagttatccgca 459
            || ||||||||| ||| ||||  ||||||||||||
Sbjct: 508 acaccggcgaggttgtggcgatcaaagttatccgca 543
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>ref|XM_466313.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1191

 Score =  109 bits (55), Expect = 8e-21
 Identities = 79/87 (90%)
 Strand = Plus / Plus

                                                                       
Query: 349 gacgagaaccggacgatctgggtcggcgacctccagtactggatggacgagaactacctc 408
           ||||||||||||||||| |||||||| || |||||||||||||||||||||  |||||| 
Sbjct: 325 gacgagaaccggacgatttgggtcggggatctccagtactggatggacgagggctacctg 384

                                      
Query: 409 cacagctgcttcggccccagcggcgag 435
           |||| |||||| |||||||||||||||
Sbjct: 385 cacaactgctttggccccagcggcgag 411
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>gb|AY109533.1| Zea mays CL775_1 mRNA sequence
          Length = 1689

 Score =  103 bits (52), Expect = 5e-19
 Identities = 79/88 (89%)
 Strand = Plus / Plus

                                                                       
Query: 355 aaccggacgatctgggtcggcgacctccagtactggatggacgagaactacctccacagc 414
           |||||||| |||||||| |||||||| ||||||||||||||||| ||||| || ||||||
Sbjct: 401 aaccggaccatctgggtgggcgacctgcagtactggatggacgaaaactatcttcacagc 460

                                       
Query: 415 tgcttcggccccagcggcgaggtcgtga 442
           ||||||||| | ||||||||||| ||||
Sbjct: 461 tgcttcggctctagcggcgaggtggtga 488



 Score = 46.1 bits (23), Expect = 0.10
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                  
Query: 177 gcatcctcaccaccacatgccgcagccgcggtgggtggt 215
           |||||| || ||||| |||||||| ||||||||||||||
Sbjct: 223 gcatccgcatcaccatatgccgcaaccgcggtgggtggt 261
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>gb|BT018995.1| Zea mays clone Contig483.F mRNA sequence
          Length = 1456

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 64/71 (90%)
 Strand = Plus / Plus

                                                                       
Query: 367 tgggtcggcgacctccagtactggatggacgagaactacctccacagctgcttcggcccc 426
           |||||||| |||||||||||||||||||| || |||||||| || | ||||||||| |||
Sbjct: 166 tgggtcggtgacctccagtactggatggatgaaaactacctacataactgcttcgggccc 225

                      
Query: 427 agcggcgaggt 437
           |||||||||||
Sbjct: 226 agcggcgaggt 236
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>gb|AY104980.1| Zea mays PCO111857 mRNA sequence
          Length = 1651

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 64/71 (90%)
 Strand = Plus / Plus

                                                                       
Query: 367 tgggtcggcgacctccagtactggatggacgagaactacctccacagctgcttcggcccc 426
           |||||||| |||||||||||||||||||| || |||||||| || | ||||||||| |||
Sbjct: 375 tgggtcggtgacctccagtactggatggatgaaaactacctacataactgcttcgggccc 434

                      
Query: 427 agcggcgaggt 437
           |||||||||||
Sbjct: 435 agcggcgaggt 445



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                        
Query: 184 caccaccacatgccgcagccgcggtgggt 212
           |||||||||||||||||||| ||||||||
Sbjct: 168 caccaccacatgccgcagccacggtgggt 196
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 69/79 (87%)
 Strand = Plus / Plus

                                                                           
Query: 359     ggacgatctgggtcggcgacctccagtactggatggacgagaactacctccacagctgct 418
               ||||| ||||| ||||||||||||||||||||   ||||||||||||||| ||| |||||
Sbjct: 3952030 ggacgctctggatcggcgacctccagtactgggccgacgagaactacctctacaactgct 3952089

                                  
Query: 419     tcggccccagcggcgaggt 437
               ||| || || |||||||||
Sbjct: 3952090 tcgcccacaccggcgaggt 3952108



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 45/50 (90%)
 Strand = Plus / Minus

                                                                  
Query: 371      tcggcgacctccagtactggatggacgagaactacctccacagctgcttc 420
                ||||||||||||||| ||||||||| |||||||||||  ||| |||||||
Sbjct: 20468290 tcggcgacctccagttctggatggaagagaactacctgtacaactgcttc 20468241



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 307     actccgcctccgccaccggc 326
               ||||||||||||||||||||
Sbjct: 5947630 actccgcctccgccaccggc 5947649
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>gb|AC090484.4| Genomic sequence for Oryza sativa, Nipponbare strain, clone
              OSJNBa0061L19, from chromosome 3, complete sequence
          Length = 153322

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 69/79 (87%)
 Strand = Plus / Minus

                                                                          
Query: 359    ggacgatctgggtcggcgacctccagtactggatggacgagaactacctccacagctgct 418
              ||||| ||||| ||||||||||||||||||||   ||||||||||||||| ||| |||||
Sbjct: 147338 ggacgctctggatcggcgacctccagtactgggccgacgagaactacctctacaactgct 147279

                                 
Query: 419    tcggccccagcggcgaggt 437
              ||| || || |||||||||
Sbjct: 147278 tcgcccacaccggcgaggt 147260
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 69/79 (87%)
 Strand = Plus / Plus

                                                                           
Query: 359     ggacgatctgggtcggcgacctccagtactggatggacgagaactacctccacagctgct 418
               ||||| ||||| ||||||||||||||||||||   ||||||||||||||| ||| |||||
Sbjct: 3952141 ggacgctctggatcggcgacctccagtactgggccgacgagaactacctctacaactgct 3952200

                                  
Query: 419     tcggccccagcggcgaggt 437
               ||| || || |||||||||
Sbjct: 3952201 tcgcccacaccggcgaggt 3952219



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 45/50 (90%)
 Strand = Plus / Minus

                                                                  
Query: 371      tcggcgacctccagtactggatggacgagaactacctccacagctgcttc 420
                ||||||||||||||| ||||||||| |||||||||||  ||| |||||||
Sbjct: 20461319 tcggcgacctccagttctggatggaagagaactacctgtacaactgcttc 20461270



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 307     actccgcctccgccaccggc 326
               ||||||||||||||||||||
Sbjct: 5946843 actccgcctccgccaccggc 5946862
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>gb|AC126221.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0015N19,
              complete sequence
          Length = 168430

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 69/79 (87%)
 Strand = Plus / Plus

                                                                          
Query: 359    ggacgatctgggtcggcgacctccagtactggatggacgagaactacctccacagctgct 418
              ||||| ||||| ||||||||||||||||||||   ||||||||||||||| ||| |||||
Sbjct: 158503 ggacgctctggatcggcgacctccagtactgggccgacgagaactacctctacaactgct 158562

                                 
Query: 419    tcggccccagcggcgaggt 437
              ||| || || |||||||||
Sbjct: 158563 tcgcccacaccggcgaggt 158581
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>gb|AY109704.1| Zea mays CL776_1 mRNA sequence
          Length = 1722

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 48/51 (94%)
 Strand = Plus / Plus

                                                              
Query: 371 tcggcgacctccagtactggatggacgagaactacctccacagctgcttcg 421
           |||||||||||||||||||||  ||||||||||||||| ||||||||||||
Sbjct: 238 tcggcgacctccagtactggaccgacgagaactacctctacagctgcttcg 288
to top
>dbj|AK104916.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-047-E08, full
           insert sequence
          Length = 1569

 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 67/77 (87%)
 Strand = Plus / Plus

                                                                       
Query: 359 ggacgatctgggtcggcgacctccagtactggatggacgagaactacctccacagctgct 418
           ||||| ||||| ||||||||||||||||||||   ||||||||||||||| ||| |||||
Sbjct: 114 ggacgctctggatcggcgacctccagtactgggccgacgagaactacctctacaactgct 173

                            
Query: 419 tcggccccagcggcgag 435
           ||| || || |||||||
Sbjct: 174 tcgcccacaccggcgag 190
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>dbj|AK065337.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000M06, full
           insert sequence
          Length = 1559

 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 67/77 (87%)
 Strand = Plus / Plus

                                                                       
Query: 359 ggacgatctgggtcggcgacctccagtactggatggacgagaactacctccacagctgct 418
           ||||| ||||| ||||||||||||||||||||   ||||||||||||||| ||| |||||
Sbjct: 140 ggacgctctggatcggcgacctccagtactgggccgacgagaactacctctacaactgct 199

                            
Query: 419 tcggccccagcggcgag 435
           ||| || || |||||||
Sbjct: 200 tcgcccacaccggcgag 216
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>gb|AC158180.2| Selaginella moellendorffii chromosome JGIASXY-5A14, complete sequence
          Length = 36906

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 53/60 (88%)
 Strand = Plus / Plus

                                                                        
Query: 360  gacgatctgggtcggcgacctccagtactggatggacgagaactacctccacagctgctt 419
            |||| ||||||| ||||| |||||||||||||||||||||  ||||||| | ||||||||
Sbjct: 7110 gacgctctgggtgggcgatctccagtactggatggacgagggctacctctatagctgctt 7169
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>gb|AY107267.1| Zea mays PCO073795 mRNA sequence
          Length = 1599

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 50/56 (89%)
 Strand = Plus / Plus

                                                                   
Query: 365 tctgggtcggcgacctccagtactggatggacgagaactacctccacagctgcttc 420
           ||||| |||| ||||| |||||||||||||| |||||||||||| | |||||||||
Sbjct: 351 tctggatcggggacctgcagtactggatggatgagaactacctctatagctgcttc 406
to top
>ref|NM_184951.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1697

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 45/50 (90%)
 Strand = Plus / Plus

                                                             
Query: 371 tcggcgacctccagtactggatggacgagaactacctccacagctgcttc 420
           ||||||||||||||| ||||||||| |||||||||||  ||| |||||||
Sbjct: 255 tcggcgacctccagttctggatggaagagaactacctgtacaactgcttc 304
to top
>gb|AC084319.5|AC084319 Oryza sativa chromosome 3 BAC OSJNBa0004B24 genomic sequence, complete
              sequence
          Length = 152883

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 45/50 (90%)
 Strand = Plus / Minus

                                                                
Query: 371    tcggcgacctccagtactggatggacgagaactacctccacagctgcttc 420
              ||||||||||||||| ||||||||| |||||||||||  ||| |||||||
Sbjct: 112590 tcggcgacctccagttctggatggaagagaactacctgtacaactgcttc 112541
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>dbj|AK119985.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-184-F11, full
           insert sequence
          Length = 1084

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 45/50 (90%)
 Strand = Plus / Plus

                                                             
Query: 371 tcggcgacctccagtactggatggacgagaactacctccacagctgcttc 420
           ||||||||||||||| ||||||||| |||||||||||  ||| |||||||
Sbjct: 243 tcggcgacctccagttctggatggaagagaactacctgtacaactgcttc 292
to top
>dbj|AK101593.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033051E20, full
           insert sequence
          Length = 1710

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 45/50 (90%)
 Strand = Plus / Plus

                                                             
Query: 371 tcggcgacctccagtactggatggacgagaactacctccacagctgcttc 420
           ||||||||||||||| ||||||||| |||||||||||  ||| |||||||
Sbjct: 347 tcggcgacctccagttctggatggaagagaactacctgtacaactgcttc 396
to top
>ref|XM_480466.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1284

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 42/47 (89%)
 Strand = Plus / Plus

                                                          
Query: 359 ggacgatctgggtcggcgacctccagtactggatggacgagaactac 405
           ||||| ||||| |||| || ||||||||||||||||| |||||||||
Sbjct: 284 ggacgctctggatcggggatctccagtactggatggatgagaactac 330
to top
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 42/47 (89%)
 Strand = Plus / Minus

                                                              
Query: 359     ggacgatctgggtcggcgacctccagtactggatggacgagaactac 405
               ||||| ||||| |||| || ||||||||||||||||| |||||||||
Sbjct: 5266425 ggacgctctggatcggggatctccagtactggatggatgagaactac 5266379
to top
>dbj|AP005531.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:B1099H05
          Length = 186036

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 42/47 (89%)
 Strand = Plus / Minus

                                                             
Query: 359    ggacgatctgggtcggcgacctccagtactggatggacgagaactac 405
              ||||| ||||| |||| || ||||||||||||||||| |||||||||
Sbjct: 134781 ggacgctctggatcggggatctccagtactggatggatgagaactac 134735
to top
>dbj|AP005505.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0610E02
          Length = 135816

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 42/47 (89%)
 Strand = Plus / Minus

                                                            
Query: 359   ggacgatctgggtcggcgacctccagtactggatggacgagaactac 405
             ||||| ||||| |||| || ||||||||||||||||| |||||||||
Sbjct: 58013 ggacgctctggatcggggatctccagtactggatggatgagaactac 57967
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>gb|AF402959.1| Oryza sativa chromosome 4 clones V17 and 214, genomic sequence
          Length = 64224

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 53/62 (85%)
 Strand = Plus / Plus

                                                                         
Query: 360   gacgatctgggtcggcgacctccagtactggatggacgagaactacctccacagctgctt 419
             |||| ||||| |||||||||| |||  |||||||||||||| |||| || ||| ||||||
Sbjct: 20652 gacgctctggatcggcgacctgcagccctggatggacgagagctacatctacaactgctt 20711

               
Query: 420   cg 421
             ||
Sbjct: 20712 cg 20713
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>ref|XM_473964.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1245

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 53/62 (85%)
 Strand = Plus / Plus

                                                                       
Query: 360 gacgatctgggtcggcgacctccagtactggatggacgagaactacctccacagctgctt 419
           |||| ||||| |||||||||| |||  |||||||||||||| |||| || ||| ||||||
Sbjct: 237 gacgctctggatcggcgacctgcagccctggatggacgagagctacatctacaactgctt 296

             
Query: 420 cg 421
           ||
Sbjct: 297 cg 298
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>gb|BT018852.1| Zea mays clone EL01N0555H08.d mRNA sequence
          Length = 1780

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                         
Query: 382 cagtactggatggacgagaactacctccac 411
           ||||||||||||||||||||||| ||||||
Sbjct: 484 cagtactggatggacgagaactatctccac 513
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>emb|AL606669.4|OSJN00106 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0060E08,
             complete sequence
          Length = 166951

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 53/62 (85%)
 Strand = Plus / Plus

                                                                         
Query: 360   gacgatctgggtcggcgacctccagtactggatggacgagaactacctccacagctgctt 419
             |||| ||||| |||||||||| |||  |||||||||||||| |||| || ||| ||||||
Sbjct: 26579 gacgctctggatcggcgacctgcagccctggatggacgagagctacatctacaactgctt 26638

               
Query: 420   cg 421
             ||
Sbjct: 26639 cg 26640
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>emb|AL606645.2|OSJN00079 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0053K19,
              complete sequence
          Length = 187601

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 53/62 (85%)
 Strand = Plus / Plus

                                                                          
Query: 360    gacgatctgggtcggcgacctccagtactggatggacgagaactacctccacagctgctt 419
              |||| ||||| |||||||||| |||  |||||||||||||| |||| || ||| ||||||
Sbjct: 186983 gacgctctggatcggcgacctgcagccctggatggacgagagctacatctacaactgctt 187042

                
Query: 420    cg 421
              ||
Sbjct: 187043 cg 187044
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>dbj|AK120834.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023019P13, full
           insert sequence
          Length = 1599

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 53/62 (85%)
 Strand = Plus / Plus

                                                                       
Query: 360 gacgatctgggtcggcgacctccagtactggatggacgagaactacctccacagctgctt 419
           |||| ||||| |||||||||| |||  |||||||||||||| |||| || ||| ||||||
Sbjct: 331 gacgctctggatcggcgacctgcagccctggatggacgagagctacatctacaactgctt 390

             
Query: 420 cg 421
           ||
Sbjct: 391 cg 392
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>gb|AY109669.1| Zea mays CL866_1 mRNA sequence
          Length = 1821

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                         
Query: 382 cagtactggatggacgagaactacctccac 411
           ||||||||||||||||||||||| ||||||
Sbjct: 497 cagtactggatggacgagaactatctccac 526
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>gb|AY109460.1| Zea mays CL862_1 mRNA sequence
          Length = 1796

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 41/46 (89%)
 Strand = Plus / Plus

                                                         
Query: 359 ggacgatctgggtcggcgacctccagtactggatggacgagaacta 404
           ||||| ||||| |||| ||||| || ||||||||||||||||||||
Sbjct: 421 ggacgctctggatcggggacctgcaatactggatggacgagaacta 466
to top
>gb|AY107556.1| Zea mays PCO141359 mRNA sequence
          Length = 378

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                     
Query: 386 actggatggacgagaactacctccac 411
           ||||||||||||||||||||||||||
Sbjct: 280 actggatggacgagaactacctccac 305
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>dbj|AK072804.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023135B10, full
           insert sequence
          Length = 1693

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                    
Query: 365 tctgggtcggcgacctccagtactggatggacgagaactac 405
           ||||| |||| || ||||||||||||||||| |||||||||
Sbjct: 442 tctggatcggggatctccagtactggatggatgagaactac 482
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>ref|XM_478418.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1302

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 379 ctccagtactggatggacgagaactacctc 408
           ||||||||||||||||| |||| |||||||
Sbjct: 196 ctccagtactggatggatgagagctacctc 225
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>ref|XM_478419.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1156

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 379 ctccagtactggatggacgagaactacctc 408
           ||||||||||||||||| |||| |||||||
Sbjct: 296 ctccagtactggatggatgagagctacctc 325
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>gb|BT009008.1| Triticum aestivum clone wdk3c.pk0003.a5:fis, full insert mRNA
           sequence
          Length = 548

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 379 ctccagtactggatggacgagaactacctc 408
           ||||||||||||||||| |||| |||||||
Sbjct: 152 ctccagtactggatggatgagacctacctc 123
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>dbj|AB236792.1| Trifolium pratense RNA for putative DNA binding protein, partial
           cds, clone: C1861
          Length = 1438

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 49/58 (84%)
 Strand = Plus / Plus

                                                                     
Query: 365 tctgggtcggcgacctccagtactggatggacgagaactacctccacagctgcttcgg 422
           ||||| |||||||  | ||||| |||||||||||||| || ||| ||| |||||||||
Sbjct: 178 tctggatcggcgatttgcagtattggatggacgagaattatctctacacctgcttcgg 235
to top
>ref|XM_680515.1| PREDICTED: Danio rerio hypothetical protein LOC557443 (LOC557443),
           mRNA
          Length = 1192

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 29  gagcctctcctcttctcctgctcctc 54
           |||||||||||||||| |||||||||
Sbjct: 736 gagcctctcctcttctgctgctcctc 711
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                              
Query: 379      ctccagtactggatggacgagaactacctc 408
                ||||||||||||||||| |||| |||||||
Sbjct: 19867159 ctccagtactggatggatgagagctacctc 19867188



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 308     ctccgcctccgccaccggctg 328
               |||||||||||||||||||||
Sbjct: 7699484 ctccgcctccgccaccggctg 7699504
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>dbj|AP005103.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBa0036M16
          Length = 158880

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                           
Query: 379   ctccagtactggatggacgagaactacctc 408
             ||||||||||||||||| |||| |||||||
Sbjct: 31809 ctccagtactggatggatgagagctacctc 31838
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>dbj|AP005320.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0650C03
          Length = 144337

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                            
Query: 379    ctccagtactggatggacgagaactacctc 408
              ||||||||||||||||| |||| |||||||
Sbjct: 107318 ctccagtactggatggatgagagctacctc 107347
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>dbj|AK062798.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-107-C10, full
           insert sequence
          Length = 1157

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 379 ctccagtactggatggacgagaactacctc 408
           ||||||||||||||||| |||| |||||||
Sbjct: 297 ctccagtactggatggatgagagctacctc 326
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>gb|AC163015.4| Mus musculus chromosome 3, clone RP23-149I5, complete sequence
          Length = 200423

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 183    tcaccaccacatgccgcagcc 203
              |||||||||||||||||||||
Sbjct: 159348 tcaccaccacatgccgcagcc 159368
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>gb|AC100511.12| Mus musculus chromosome 3, clone RP23-144N19, complete sequence
          Length = 200790

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 183    tcaccaccacatgccgcagcc 203
              |||||||||||||||||||||
Sbjct: 168043 tcaccaccacatgccgcagcc 168023
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>emb|AJ344538.1|NTA344538 Nicotiana tabacum mRNA for nucleic acid binding protein (nbp1 gene)
          Length = 1623

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 352 gagaaccggacgatctgggtcggcgacct 380
           |||||||| |||||||||||||| |||||
Sbjct: 360 gagaaccgaacgatctgggtcggtgacct 388
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>dbj|AP005194.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0565A07
          Length = 152191

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 308   ctccgcctccgccaccggctg 328
             |||||||||||||||||||||
Sbjct: 43573 ctccgcctccgccaccggctg 43593
to top
>dbj|AK062400.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-102-E01, full
           insert sequence
          Length = 608

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 308 ctccgcctccgccaccggctg 328
           |||||||||||||||||||||
Sbjct: 71  ctccgcctccgccaccggctg 51
to top
>gb|AY109586.1| Zea mays CL860_-1 mRNA sequence
          Length = 1420

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                            
Query: 388 tggatggacgagaactacctccacagctgcttc 420
           |||||||||||| |||||||| || ||||||||
Sbjct: 236 tggatggacgaggactacctctacggctgcttc 268
to top
>gb|AC004169.3|AC004169 Homo sapiens chromosome 4 clone C0236G06 map 4p16, complete sequence
          Length = 189805

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 34     tctcctcttctcctgctcctc 54
              |||||||||||||||||||||
Sbjct: 152148 tctcctcttctcctgctcctc 152128
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>gb|AC027700.11| Mus musculus chromosome 10, clone RP23-145G7, complete sequence
          Length = 227454

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 34     tctcctcttctcctgctcctc 54
              |||||||||||||||||||||
Sbjct: 166076 tctcctcttctcctgctcctc 166056
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>gb|CP000081.1| Leishmania major chromosome 35, complete sequence
          Length = 2090491

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 156     accgcacggtcacgggcacc 175
               ||||||||||||||||||||
Sbjct: 1910957 accgcacggtcacgggcacc 1910938
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>gb|AC096938.8| Rattus norvegicus 16 BAC CH230-49B24 (Children's Hospital Oakland
              Research Institute) complete sequence
          Length = 220401

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 36     tcctcttctcctgctcctca 55
              ||||||||||||||||||||
Sbjct: 187029 tcctcttctcctgctcctca 187010
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>ref|NM_005358.3| Homo sapiens LIM domain 7 (LMO7), mRNA
          Length = 7241

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 32   cctctcctcttctcctgctc 51
            ||||||||||||||||||||
Sbjct: 4224 cctctcctcttctcctgctc 4205
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>gb|AC091262.8| Mus musculus chromosome 9, clone RP23-38G1, complete sequence
          Length = 157984

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 35    ctcctcttctcctgctcctc 54
             ||||||||||||||||||||
Sbjct: 93777 ctcctcttctcctgctcctc 93758
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>ref|XM_838502.1| Leishmania major strain Friedlin DNA replication factor (LMJ_1421)
            partial mRNA
          Length = 2727

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 156  accgcacggtcacgggcacc 175
            ||||||||||||||||||||
Sbjct: 1753 accgcacggtcacgggcacc 1734
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>ref|XM_534148.2| PREDICTED: Canis familiaris similar to LIM domain only protein 7
            (LOMP) (F-box only protein 20) (LOC476948), mRNA
          Length = 5525

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 32   cctctcctcttctcctgctc 51
            ||||||||||||||||||||
Sbjct: 3738 cctctcctcttctcctgctc 3719
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>gb|AC116997.3| Mus musculus BAC clone RP23-8J15 from chromosome 1, complete sequence
          Length = 190712

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 31     gcctctcctcttctcctgctcctc 54
              |||||| |||||||||||||||||
Sbjct: 158979 gcctctgctcttctcctgctcctc 159002
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>gb|AC129544.7| Mus musculus chromosome 12, clone RP23-258H6, complete sequence
          Length = 232275

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 1     ccctctctttccgccttcacttcctccc 28
             |||||||||||| ||||| |||||||||
Sbjct: 92147 ccctctctttcctccttcccttcctccc 92120
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>emb|AL590809.5| Human DNA sequence from clone RP11-733H21 on chromosome Xq23-24,
             complete sequence
          Length = 105329

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 34    tctcctcttctcctgctcct 53
             ||||||||||||||||||||
Sbjct: 74286 tctcctcttctcctgctcct 74267
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>emb|AL359392.9| Human DNA sequence from clone RP11-332E3 on chromosome 13 Contains the
             3' end of the LMO7 gene for LIM domain only 7(KIAA0858)
             and a novel gene, complete sequence
          Length = 150488

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 32    cctctcctcttctcctgctc 51
             ||||||||||||||||||||
Sbjct: 24383 cctctcctcttctcctgctc 24364
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>emb|AL136984.20| Human DNA sequence from clone RP11-52A20 on chromosome 1q24.1-24.3
              Contains part of the POU2F1 gene for POU domain class 2
              transcription factor 1, complete sequence
          Length = 169627

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 32     cctctcctcttctcctgctc 51
              ||||||||||||||||||||
Sbjct: 145716 cctctcctcttctcctgctc 145735
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>gb|AC121252.4| Homo sapiens chromosome 3 clone RP11-148G20, complete sequence
          Length = 105166

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 126   cccacatccccacgcccatggccc 149
             ||||||||||||| ||||||||||
Sbjct: 29379 cccacatccccacccccatggccc 29356
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>emb|BX640441.1| Bordetella bronchiseptica strain RB50, complete genome; segment 5/16
          Length = 348624

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 417    cttcggccccagcggcgagg 436
              ||||||||||||||||||||
Sbjct: 262125 cttcggccccagcggcgagg 262106
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>emb|BX640429.1| Bordetella parapertussis strain 12822, complete genome; segment 7/14
          Length = 344321

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 417    cttcggccccagcggcgagg 436
              ||||||||||||||||||||
Sbjct: 207787 cttcggccccagcggcgagg 207768
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>emb|BX323869.7| Zebrafish DNA sequence from clone CH211-206K18 in linkage group 4
              Contains the gene for a novel protein similar to vertebrate
              minichromosome maintenance deficient 10 (S.cerevisiae)
              (MCM10), the gene for a novel protein (zgc:86930), the gene
              for a novel protein (zgc:73119), the 5' end of the gene for
              a novel protein similar to vertebrate PCTAIRE protein
              kinase 2 (PCTK2), the gene for a novel protein similar to
              vertebrate phytanoyl-CoA hydroxylase (Refsum disease)
              (PHYH) and a CpG island, complete sequence
          Length = 160964

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 85     actgctgctaaaaccgatgt 104
              ||||||||||||||||||||
Sbjct: 159934 actgctgctaaaaccgatgt 159915
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>emb|CR857292.1| Pongo pygmaeus mRNA; cDNA DKFZp469O2221 (from clone
          DKFZp469O2221)
          Length = 2839

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 22 tcctcccgagcctctcctct 41
          ||||||||||||||||||||
Sbjct: 4  tcctcccgagcctctcctct 23
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>gb|AF330045.1| Homo sapiens LIM domain only 7 (LMO7) mRNA, complete cds
          Length = 7240

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 32   cctctcctcttctcctgctc 51
            ||||||||||||||||||||
Sbjct: 4223 cctctcctcttctcctgctc 4204
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>dbj|AK092052.1| Homo sapiens cDNA FLJ34733 fis, clone MESAN2006953, highly similar to
            LIM domain only 7 isoform c
          Length = 3472

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 32   cctctcctcttctcctgctc 51
            ||||||||||||||||||||
Sbjct: 3143 cctctcctcttctcctgctc 3124
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>dbj|AK055465.1| Homo sapiens cDNA FLJ30903 fis, clone FEBRA2005788, highly similar to
            LIM domain only 7 isoform c
          Length = 3165

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 32   cctctcctcttctcctgctc 51
            ||||||||||||||||||||
Sbjct: 2836 cctctcctcttctcctgctc 2817
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>gb|AF330146.1|AF330146 Gallus gallus integrin alpha 3A subunit cytoplasmic domain variant
            mRNA, complete cds
          Length = 4108

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 119  ctccgcacccacatccccac 138
            ||||||||||||||||||||
Sbjct: 2851 ctccgcacccacatccccac 2870
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>gb|AC134241.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBb0085F02, complete sequence
          Length = 128535

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 307   actccgcctccgccaccggc 326
             ||||||||||||||||||||
Sbjct: 97252 actccgcctccgccaccggc 97271
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>gb|AC135158.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1193C08,
            complete sequence
          Length = 111961

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 307  actccgcctccgccaccggc 326
            ||||||||||||||||||||
Sbjct: 6165 actccgcctccgccaccggc 6184
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 309      tccgcctccgccaccggctg 328
                ||||||||||||||||||||
Sbjct: 19062940 tccgcctccgccaccggctg 19062921
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>ref|NM_204146.1| Gallus gallus integrin, alpha 3 (antigen CD49C, alpha 3 subunit of
            VLA-3 receptor) (ITGA3), mRNA
          Length = 4108

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 119  ctccgcacccacatccccac 138
            ||||||||||||||||||||
Sbjct: 2851 ctccgcacccacatccccac 2870
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>gb|AC005923.2| Homo sapiens 3 PAC RP4-751E10 (Roswell Park Cancer Institute Human PAC
             Library) complete sequence
          Length = 88326

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 126   cccacatccccacgcccatggccc 149
             ||||||||||||| ||||||||||
Sbjct: 79549 cccacatccccacccccatggccc 79572
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>dbj|AP004730.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
              clone:OSJNBa0009J19
          Length = 156988

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 309    tccgcctccgccaccggctg 328
              ||||||||||||||||||||
Sbjct: 155610 tccgcctccgccaccggctg 155591
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>dbj|AP004328.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OJ1616_B03
          Length = 96081

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 309   tccgcctccgccaccggctg 328
             ||||||||||||||||||||
Sbjct: 60424 tccgcctccgccaccggctg 60405
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>dbj|AK074265.1| Homo sapiens cDNA FLJ23685 fis, clone HEP10068, highly similar to
           Homo sapiens LOMP protein mRNA
          Length = 2513

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 32  cctctcctcttctcctgctc 51
           ||||||||||||||||||||
Sbjct: 673 cctctcctcttctcctgctc 654
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>gb|AC004893.1|AC004893 Homo sapiens PAC clone RP4-808A1 from 7q21.1-q31.1, complete sequence
          Length = 103738

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 391   atggacgagaactacctccacagc 414
             ||||||||||||||||| ||||||
Sbjct: 10035 atggacgagaactacctgcacagc 10012
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>emb|BX510353.10| Zebrafish DNA sequence from clone DKEY-201E17 in linkage group 4,
             complete sequence
          Length = 77999

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 85    actgctgctaaaaccgatgt 104
             ||||||||||||||||||||
Sbjct: 77030 actgctgctaaaaccgatgt 77049
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>gb|AF144237.1|AF144237 Homo sapiens LOMP protein mRNA, complete cds
          Length = 3886

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 32   cctctcctcttctcctgctc 51
            ||||||||||||||||||||
Sbjct: 1684 cctctcctcttctcctgctc 1665
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>emb|AJ242525.1|CRE242525 Chlamydomonas reinhardtii partial dhc10 gene for 1 beta dynein heavy
            chain, exons 16-53
          Length = 18964

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 119  ctccgcacccacatccccac 138
            ||||||||||||||||||||
Sbjct: 7679 ctccgcacccacatccccac 7660
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>dbj|AP004926.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT13P22, TM0079c,
             complete sequence
          Length = 109022

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 50/60 (83%)
 Strand = Plus / Minus

                                                                         
Query: 346   ggtgacgagaaccggacgatctgggtcggcgacctccagtactggatggacgagaactac 405
             ||||| |||| | ||||||||||| |||| ||||| ||  | |||||||| |||||||||
Sbjct: 10057 ggtgatgagatcaggacgatctggctcggtgaccttcatcattggatggatgagaactac 9998
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>dbj|AB020665.2| Homo sapiens mRNA for KIAA0858 protein, partial cds
          Length = 5510

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 32   cctctcctcttctcctgctc 51
            ||||||||||||||||||||
Sbjct: 3801 cctctcctcttctcctgctc 3782


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,851,097
Number of Sequences: 3902068
Number of extensions: 2851097
Number of successful extensions: 61682
Number of sequences better than 10.0: 93
Number of HSP's better than 10.0 without gapping: 99
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 61084
Number of HSP's gapped (non-prelim): 598
length of query: 470
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 448
effective length of database: 17,147,199,772
effective search space: 7681945497856
effective search space used: 7681945497856
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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