>TS101_HUMAN (Q99816) Tumor susceptibility gene 101 protein|
          Length = 390

 Score = 66.2 bits (160), Expect = 4e-11
 Identities = 27/67 (40%), Positives = 40/67 (59%)
 Frame = +3

Query: 261 FPSLHPKAALFTHNDGRAAHLLQADGTVPIHHAGATYNLPAVIWLPETYPRSPPLVFLSP 440
           +  L P    +  NDG +  L+   GT+P+ + G TYN+P  +WL +TYP +PP+ F+ P
Sbjct: 32  YKDLKPVLDSYVFNDGSSRELMNLTGTIPVPYRGNTYNIPICLWLLDTYPYNPPICFVKP 91

Query: 441 TRDMLIK 461
           T  M IK
Sbjct: 92  TSSMTIK 98

>TS101_RAT (Q6IRE4) Tumor susceptibility gene 101 protein|
          Length = 391

 Score = 64.3 bits (155), Expect = 2e-10
 Identities = 26/67 (38%), Positives = 39/67 (58%)
 Frame = +3

Query: 261 FPSLHPKAALFTHNDGRAAHLLQADGTVPIHHAGATYNLPAVIWLPETYPRSPPLVFLSP 440
           +  L P    +  NDG +  L+   GT+P+ + G  YN+P  +WL +TYP +PP+ F+ P
Sbjct: 32  YKDLKPVLDSYVFNDGSSRELVNLTGTIPVRYRGNIYNIPICLWLLDTYPYNPPICFVKP 91

Query: 441 TRDMLIK 461
           T  M IK
Sbjct: 92  TSSMTIK 98

>TS101_MOUSE (Q61187) Tumor susceptibility gene 101 protein|
          Length = 391

 Score = 64.3 bits (155), Expect = 2e-10
 Identities = 26/67 (38%), Positives = 39/67 (58%)
 Frame = +3

Query: 261 FPSLHPKAALFTHNDGRAAHLLQADGTVPIHHAGATYNLPAVIWLPETYPRSPPLVFLSP 440
           +  L P    +  NDG +  L+   GT+P+ + G  YN+P  +WL +TYP +PP+ F+ P
Sbjct: 32  YKDLKPVLDSYVFNDGSSRELVNLTGTIPVRYRGNIYNIPICLWLLDTYPYNPPICFVKP 91

Query: 441 TRDMLIK 461
           T  M IK
Sbjct: 92  TSSMTIK 98

>STP22_YEAST (P25604) Suppressor protein STP22 of temperature-sensitive|
           alpha-factor receptor and arginine permease (Vacuolar
           protein sorting-associated protein VPS23)
          Length = 385

 Score = 54.7 bits (130), Expect = 1e-07
 Identities = 24/66 (36%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
 Frame = +3

Query: 243 VALADAFPSLHPKAALFTHNDGRAAHLLQADGTVPIHHAGAT-YNLPAVIWLPETYPRSP 419
           +AL D F SL P+  +FTH+DG    LL   GT+     G++ +++P ++W+P  YP  P
Sbjct: 36  LALLDNFHSLRPRTRVFTHSDGTPQLLLSIYGTISTGEDGSSPHSIPVIMWVPSMYPVKP 95

Query: 420 PLVFLS 437
           P + ++
Sbjct: 96  PFISIN 101

>HAM11_BACHD (Q9KDQ1) HAM1 protein homolog 1|
          Length = 193

 Score = 30.8 bits (68), Expect = 2.1
 Identities = 24/82 (29%), Positives = 36/82 (43%)
 Frame = +3

Query: 171 ALSQRGPSALPYAEDVKWLIRNHLVALADAFPSLHPKAALFTHNDGRAAHLLQADGTVPI 350
           A+ Q  P+A+  AED         V   D FP++     +   +D RAA +LQ  G  P+
Sbjct: 55  AVRQYEPTAIIVAED-----SGLCVDALDGFPNVRTARFMEGTDDERAAKVLQRLGDRPM 109

Query: 351 HHAGATYNLPAVIWLPETYPRS 416
               A +    VI  P+   R+
Sbjct: 110 SERTAVFQSAVVILFPDGLMRT 131

>EXO84_YARLI (Q6C238) Exocyst complex component EXO84|
          Length = 657

 Score = 30.0 bits (66), Expect = 3.5
 Identities = 18/56 (32%), Positives = 27/56 (48%)
 Frame = +3

Query: 231 RNHLVALADAFPSLHPKAALFTHNDGRAAHLLQADGTVPIHHAGATYNLPAVIWLP 398
           RN +V L + + +    A+LF H +G   +L    G   +  +GA Y L A  W P
Sbjct: 234 RNSMVMLENMWAN--ELASLFKHVEGAVKYLPAIPGRHVVAESGAWYQLNAATWKP 287

>SYV_LEGPH (Q5ZXL2) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)|
           (ValRS)
          Length = 921

 Score = 28.9 bits (63), Expect = 7.8
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = +3

Query: 249 LADAFPSLHPKAALFTHNDGRAAHLLQADGTVPI 350
           L D   ++HP  + F H  G+  HL   D T+P+
Sbjct: 219 LGDCAVAIHPDDSRFRHLIGKQVHLPLCDRTIPV 252

>SYV_LEGPA (Q5X728) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)|
           (ValRS)
          Length = 921

 Score = 28.9 bits (63), Expect = 7.8
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = +3

Query: 249 LADAFPSLHPKAALFTHNDGRAAHLLQADGTVPI 350
           L D   ++HP  + F H  G+  HL   D T+P+
Sbjct: 219 LGDCAVAIHPDDSRFRHLIGKQVHLPLCDRTIPV 252


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 35,640,228
Number of Sequences: 219361
Number of extensions: 586305
Number of successful extensions: 2217
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2149
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2214
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3465624120
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)