ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast78f08 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 470 bits (237), Expect = e-129 Identities = 331/361 (91%), Gaps = 1/361 (0%) Strand = Plus / Minus Query: 129 ccggcgagcggagcgcagtacgcgcaccagttcctcaacaccgccctctcgcagcggggg 188 ||||||||||| ||||||||||||||||||||||| ||||| || ||||| ||||| ||| Sbjct: 35856718 ccggcgagcggcgcgcagtacgcgcaccagttcctgaacacggcgctctcccagcgcggg 35856659 Query: 189 ccctcggcgctcccctacgcggaggacgtcaagtggctcatccgcaaccacctcgtcgcc 248 ||||| || || ||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 35856658 ccctccgccctgccctacgcggaggacgtgaagtggctgatccgcaaccacctcgtcgcc 35856599 Query: 249 ctcgccgacgccttcccctcgctccaccccaaggcggccctcttcacccacaacgacggc 308 ||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 35856598 ctcgccgacgctttcccctcgctccaccccaaggccgccctcttcacccacaacgacggc 35856539 Query: 309 cgcgccgcccacctgctccaggccgacggcaccgtccccatccaccacgccggggccacc 368 |||||||||||||| |||||||||||||||||| ||||||||||||||||||| ||| || Sbjct: 35856538 cgcgccgcccacctcctccaggccgacggcaccatccccatccaccacgccggcgcctcc 35856479 Query: 369 tacaacctgcccgccgtcatctggctgcccgagacctacccgcgctccccgcccctcgtc 428 |||||||| ||||| ||| ||||||| || ||| |||||||||| || |||||||||||| Sbjct: 35856478 tacaacctccccgctgtcctctggctcccggagccctacccgcggtcgccgcccctcgtc 35856419 Query: 429 ttcctctcccccacccgcgacatgctcatcaag-cccaccacccgctcgtcgaccgctcc 487 ||||||||||| || ||||||||| |||||||| |||||||||| ||||||||||||||| Sbjct: 35856418 ttcctctccccaacacgcgacatggtcatcaagccccaccaccccctcgtcgaccgctcc 35856359 Query: 488 g 488 | Sbjct: 35856358 g 35856358 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 111 tccccgtccccgccgccgccggc 133 ||||||||||||||||||||||| Sbjct: 23044530 tccccgtccccgccgccgccggc 23044552 Score = 44.1 bits (22), Expect = 0.43 Identities = 25/26 (96%) Strand = Plus / Plus Query: 106 cgccgtccccgtccccgccgccgccg 131 ||||||| |||||||||||||||||| Sbjct: 24155589 cgccgtcgccgtccccgccgccgccg 24155614 Score = 44.1 bits (22), Expect = 0.43 Identities = 28/30 (93%) Strand = Plus / Plus Query: 105 gcgccgtccccgtccccgccgccgccggcg 134 ||||||||||||||||||| || ||||||| Sbjct: 11003983 gcgccgtccccgtccccgctgctgccggcg 11004012 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 23 ctccttcccctgcttccccca 43 ||||||||||||||||||||| Sbjct: 27095790 ctccttcccctgcttccccca 27095810 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 112 ccccgtccccgccgccgccg 131 |||||||||||||||||||| Sbjct: 28532393 ccccgtccccgccgccgccg 28532412
>dbj|AP005290.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1282_E10 Length = 107284 Score = 470 bits (237), Expect = e-129 Identities = 331/361 (91%), Gaps = 1/361 (0%) Strand = Plus / Minus Query: 129 ccggcgagcggagcgcagtacgcgcaccagttcctcaacaccgccctctcgcagcggggg 188 ||||||||||| ||||||||||||||||||||||| ||||| || ||||| ||||| ||| Sbjct: 47264 ccggcgagcggcgcgcagtacgcgcaccagttcctgaacacggcgctctcccagcgcggg 47205 Query: 189 ccctcggcgctcccctacgcggaggacgtcaagtggctcatccgcaaccacctcgtcgcc 248 ||||| || || ||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 47204 ccctccgccctgccctacgcggaggacgtgaagtggctgatccgcaaccacctcgtcgcc 47145 Query: 249 ctcgccgacgccttcccctcgctccaccccaaggcggccctcttcacccacaacgacggc 308 ||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 47144 ctcgccgacgctttcccctcgctccaccccaaggccgccctcttcacccacaacgacggc 47085 Query: 309 cgcgccgcccacctgctccaggccgacggcaccgtccccatccaccacgccggggccacc 368 |||||||||||||| |||||||||||||||||| ||||||||||||||||||| ||| || Sbjct: 47084 cgcgccgcccacctcctccaggccgacggcaccatccccatccaccacgccggcgcctcc 47025 Query: 369 tacaacctgcccgccgtcatctggctgcccgagacctacccgcgctccccgcccctcgtc 428 |||||||| ||||| ||| ||||||| || ||| |||||||||| || |||||||||||| Sbjct: 47024 tacaacctccccgctgtcctctggctcccggagccctacccgcggtcgccgcccctcgtc 46965 Query: 429 ttcctctcccccacccgcgacatgctcatcaag-cccaccacccgctcgtcgaccgctcc 487 ||||||||||| || ||||||||| |||||||| |||||||||| ||||||||||||||| Sbjct: 46964 ttcctctccccaacacgcgacatggtcatcaagccccaccaccccctcgtcgaccgctcc 46905 Query: 488 g 488 | Sbjct: 46904 g 46904
>dbj|AK102994.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033116E04, full insert sequence Length = 1547 Score = 470 bits (237), Expect = e-129 Identities = 331/361 (91%), Gaps = 1/361 (0%) Strand = Plus / Plus Query: 129 ccggcgagcggagcgcagtacgcgcaccagttcctcaacaccgccctctcgcagcggggg 188 ||||||||||| ||||||||||||||||||||||| ||||| || ||||| ||||| ||| Sbjct: 127 ccggcgagcggcgcgcagtacgcgcaccagttcctgaacacggcgctctcccagcgcggg 186 Query: 189 ccctcggcgctcccctacgcggaggacgtcaagtggctcatccgcaaccacctcgtcgcc 248 ||||| || || ||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 187 ccctccgccctgccctacgcggaggacgtgaagtggctgatccgcaaccacctcgtcgcc 246 Query: 249 ctcgccgacgccttcccctcgctccaccccaaggcggccctcttcacccacaacgacggc 308 ||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 247 ctcgccgacgctttcccctcgctccaccccaaggccgccctcttcacccacaacgacggc 306 Query: 309 cgcgccgcccacctgctccaggccgacggcaccgtccccatccaccacgccggggccacc 368 |||||||||||||| |||||||||||||||||| ||||||||||||||||||| ||| || Sbjct: 307 cgcgccgcccacctcctccaggccgacggcaccatccccatccaccacgccggcgcctcc 366 Query: 369 tacaacctgcccgccgtcatctggctgcccgagacctacccgcgctccccgcccctcgtc 428 |||||||| ||||| ||| ||||||| || ||| |||||||||| || |||||||||||| Sbjct: 367 tacaacctccccgctgtcctctggctcccggagccctacccgcggtcgccgcccctcgtc 426 Query: 429 ttcctctcccccacccgcgacatgctcatcaag-cccaccacccgctcgtcgaccgctcc 487 ||||||||||| || ||||||||| |||||||| |||||||||| ||||||||||||||| Sbjct: 427 ttcctctccccaacacgcgacatggtcatcaagccccaccaccccctcgtcgaccgctcc 486 Query: 488 g 488 | Sbjct: 487 g 487
>dbj|AK069209.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023009E01, full insert sequence Length = 1562 Score = 470 bits (237), Expect = e-129 Identities = 331/361 (91%), Gaps = 1/361 (0%) Strand = Plus / Plus Query: 129 ccggcgagcggagcgcagtacgcgcaccagttcctcaacaccgccctctcgcagcggggg 188 ||||||||||| ||||||||||||||||||||||| ||||| || ||||| ||||| ||| Sbjct: 142 ccggcgagcggcgcgcagtacgcgcaccagttcctgaacacggcgctctcccagcgcggg 201 Query: 189 ccctcggcgctcccctacgcggaggacgtcaagtggctcatccgcaaccacctcgtcgcc 248 ||||| || || ||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 202 ccctccgccctgccctacgcggaggacgtgaagtggctgatccgcaaccacctcgtcgcc 261 Query: 249 ctcgccgacgccttcccctcgctccaccccaaggcggccctcttcacccacaacgacggc 308 ||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 262 ctcgccgacgctttcccctcgctccaccccaaggccgccctcttcacccacaacgacggc 321 Query: 309 cgcgccgcccacctgctccaggccgacggcaccgtccccatccaccacgccggggccacc 368 |||||||||||||| |||||||||||||||||| ||||||||||||||||||| ||| || Sbjct: 322 cgcgccgcccacctcctccaggccgacggcaccatccccatccaccacgccggcgcctcc 381 Query: 369 tacaacctgcccgccgtcatctggctgcccgagacctacccgcgctccccgcccctcgtc 428 |||||||| ||||| ||| ||||||| || ||| |||||||||| || |||||||||||| Sbjct: 382 tacaacctccccgctgtcctctggctcccggagccctacccgcggtcgccgcccctcgtc 441 Query: 429 ttcctctcccccacccgcgacatgctcatcaag-cccaccacccgctcgtcgaccgctcc 487 ||||||||||| || ||||||||| |||||||| |||||||||| ||||||||||||||| Sbjct: 442 ttcctctccccaacacgcgacatggtcatcaagccccaccaccccctcgtcgaccgctcc 501 Query: 488 g 488 | Sbjct: 502 g 502
>ref|NM_188305.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 582 Score = 48.1 bits (24), Expect = 0.027 Identities = 24/24 (100%) Strand = Plus / Plus Query: 108 ccgtccccgtccccgccgccgccg 131 |||||||||||||||||||||||| Sbjct: 142 ccgtccccgtccccgccgccgccg 165
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 48.1 bits (24), Expect = 0.027 Identities = 24/24 (100%) Strand = Plus / Minus Query: 108 ccgtccccgtccccgccgccgccg 131 |||||||||||||||||||||||| Sbjct: 5597870 ccgtccccgtccccgccgccgccg 5597847 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 111 tccccgtccccgccgccgccg 131 ||||||||||||||||||||| Sbjct: 5584000 tccccgtccccgccgccgccg 5583980 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 116 gtccccgccgccgccggcgag 136 ||||||||||||||||||||| Sbjct: 3958560 gtccccgccgccgccggcgag 3958540 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 120 ccgccgccgccggcgagcgg 139 |||||||||||||||||||| Sbjct: 39736028 ccgccgccgccggcgagcgg 39736047 Score = 40.1 bits (20), Expect = 6.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 107 gccgtccccgtccccgccgccgccggcg 134 |||||| ||||| ||||||||||||||| Sbjct: 34451494 gccgtcgccgtcgccgccgccgccggcg 34451521
>dbj|AP003105.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0489A05 Length = 158815 Score = 48.1 bits (24), Expect = 0.027 Identities = 24/24 (100%) Strand = Plus / Minus Query: 108 ccgtccccgtccccgccgccgccg 131 |||||||||||||||||||||||| Sbjct: 63343 ccgtccccgtccccgccgccgccg 63320 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 111 tccccgtccccgccgccgccg 131 ||||||||||||||||||||| Sbjct: 49473 tccccgtccccgccgccgccg 49453
>ref|XM_466509.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1038 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 111 tccccgtccccgccgccgccggc 133 ||||||||||||||||||||||| Sbjct: 341 tccccgtccccgccgccgccggc 363
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 109 cgtccccgtccccgccgccgccg 131 ||||||||||||||||||||||| Sbjct: 30909949 cgtccccgtccccgccgccgccg 30909927 Score = 40.1 bits (20), Expect = 6.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 106 cgccgtccccgtccccgccgccgccggc 133 ||||||| ||||| |||||||||||||| Sbjct: 31021254 cgccgtcgccgtcgccgccgccgccggc 31021281 Score = 40.1 bits (20), Expect = 6.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 106 cgccgtccccgtccccgccgccgccggc 133 ||||||| ||||| |||||||||||||| Sbjct: 25867793 cgccgtcgccgtcgccgccgccgccggc 25867820 Score = 40.1 bits (20), Expect = 6.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 241 tcgtcgccctcgccgacgccttcccctc 268 |||||| |||||||| |||||||||||| Sbjct: 20377141 tcgtcggcctcgccgtcgccttcccctc 20377168 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 14 ctcttcttcctccttcccct 33 |||||||||||||||||||| Sbjct: 6932149 ctcttcttcctccttcccct 6932130 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 108 ccgtccccgtccccgccgccgccg 131 |||||||||||| ||||||||||| Sbjct: 5764691 ccgtccccgtccacgccgccgccg 5764714
>gb|AC133089.4| Mus musculus BAC clone RP24-165M3 from chromosome 19, complete sequence Length = 149637 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 14 ctcttcttcctccttcccctgcttccc 40 |||||||||||||||||||| |||||| Sbjct: 138291 ctcttcttcctccttcccctccttccc 138265
>gb|AC130819.4| Mus musculus BAC clone RP23-118O2 from chromosome 19, complete sequence Length = 223575 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 14 ctcttcttcctccttcccctgcttccc 40 |||||||||||||||||||| |||||| Sbjct: 76552 ctcttcttcctccttcccctccttccc 76526
>gb|AC120509.3| Oryza sativa chromosome 3 BAC OSJNBb0081K01 genomic sequence, complete sequence Length = 122496 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 109 cgtccccgtccccgccgccgccg 131 ||||||||||||||||||||||| Sbjct: 33141 cgtccccgtccccgccgccgccg 33163
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 109 cgtccccgtccccgccgccgccg 131 ||||||||||||||||||||||| Sbjct: 31000472 cgtccccgtccccgccgccgccg 31000450 Score = 40.1 bits (20), Expect = 6.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 106 cgccgtccccgtccccgccgccgccggc 133 ||||||| ||||| |||||||||||||| Sbjct: 31111777 cgccgtcgccgtcgccgccgccgccggc 31111804 Score = 40.1 bits (20), Expect = 6.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 106 cgccgtccccgtccccgccgccgccggc 133 ||||||| ||||| |||||||||||||| Sbjct: 25959102 cgccgtcgccgtcgccgccgccgccggc 25959129 Score = 40.1 bits (20), Expect = 6.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 241 tcgtcgccctcgccgacgccttcccctc 268 |||||| |||||||| |||||||||||| Sbjct: 20370170 tcgtcggcctcgccgtcgccttcccctc 20370197 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 14 ctcttcttcctccttcccct 33 |||||||||||||||||||| Sbjct: 6930044 ctcttcttcctccttcccct 6930025 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 108 ccgtccccgtccccgccgccgccg 131 |||||||||||| ||||||||||| Sbjct: 5763904 ccgtccccgtccacgccgccgccg 5763927
>dbj|AP004023.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1126_D09 Length = 138615 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 111 tccccgtccccgccgccgccggc 133 ||||||||||||||||||||||| Sbjct: 11568 tccccgtccccgccgccgccggc 11590
>dbj|AP004079.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1067_B01 Length = 100525 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 111 tccccgtccccgccgccgccggc 133 ||||||||||||||||||||||| Sbjct: 68927 tccccgtccccgccgccgccggc 68949
>ref|XM_466695.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1377 Score = 44.1 bits (22), Expect = 0.43 Identities = 25/26 (96%) Strand = Plus / Minus Query: 106 cgccgtccccgtccccgccgccgccg 131 ||||||| |||||||||||||||||| Sbjct: 154 cgccgtcgccgtccccgccgccgccg 129
>gb|AF182374.6| Bradyrhizobium sp. ORS278 photosynthetic gene cluser, complete sequence; and bacteriophytochrome (bphP), PpsR protein (ppsR), cytochrome C2 (cycA), geranylgeranyl bacteriochlorophyll reductase (bchP), light harvesting pigment major facilitator family (bch2), geranylgeranyl-bacteriochlorophyll synthetase (bchG), PpsR1 (ppsR1), and transcriptional regulator, AerR (aerR) genes, complete cds; and 2-vinyl bacteriochlorophillide hydratase BchF subunit (bchF) gene, partial cds Length = 30040 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Minus Query: 242 cgtcgccctcgccgacgccttc 263 |||||||||||||||||||||| Sbjct: 11926 cgtcgccctcgccgacgccttc 11905
>gb|AC102114.9| Mus musculus chromosome 10, clone RP23-139F20, complete sequence Length = 232173 Score = 44.1 bits (22), Expect = 0.43 Identities = 25/26 (96%) Strand = Plus / Plus Query: 14 ctcttcttcctccttcccctgcttcc 39 |||||||||||||||||||| ||||| Sbjct: 29573 ctcttcttcctccttccccttcttcc 29598
>gb|AC021630.11| Mus musculus chromosome 14, clone RP23-178B24, complete sequence Length = 202804 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Plus Query: 21 tcctccttcccctgcttccccc 42 |||||||||||||||||||||| Sbjct: 3199 tcctccttcccctgcttccccc 3220
>tpg|BK001744.1| TPA: TPA_exp: Suid herpesvirus 1, complete genome Length = 143461 Score = 44.1 bits (22), Expect = 0.43 Identities = 25/26 (96%) Strand = Plus / Minus Query: 109 cgtccccgtccccgccgccgccggcg 134 |||||||||||||| ||||||||||| Sbjct: 77636 cgtccccgtccccgtcgccgccggcg 77611
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Plus Query: 106 cgccgtccccgtccccgccgcc 127 |||||||||||||||||||||| Sbjct: 4004053 cgccgtccccgtccccgccgcc 4004074
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 44.1 bits (22), Expect = 0.43 Identities = 25/26 (96%) Strand = Plus / Minus Query: 311 cgccgcccacctgctccaggccgacg 336 |||||||||||||||| ||||||||| Sbjct: 944270 cgccgcccacctgctcgaggccgacg 944245
>dbj|AP004212.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1086_G08 Length = 59883 Score = 44.1 bits (22), Expect = 0.43 Identities = 28/30 (93%) Strand = Plus / Plus Query: 105 gcgccgtccccgtccccgccgccgccggcg 134 ||||||||||||||||||| || ||||||| Sbjct: 30646 gcgccgtccccgtccccgctgctgccggcg 30675
>dbj|AP004168.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1756_H07 Length = 217205 Score = 44.1 bits (22), Expect = 0.43 Identities = 28/30 (93%) Strand = Plus / Plus Query: 105 gcgccgtccccgtccccgccgccgccggcg 134 ||||||||||||||||||| || ||||||| Sbjct: 210182 gcgccgtccccgtccccgctgctgccggcg 210211
>dbj|AP005286.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1004_A05 Length = 174290 Score = 44.1 bits (22), Expect = 0.43 Identities = 25/26 (96%) Strand = Plus / Plus Query: 106 cgccgtccccgtccccgccgccgccg 131 ||||||| |||||||||||||||||| Sbjct: 114330 cgccgtcgccgtccccgccgccgccg 114355
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Plus Query: 106 cgccgtccccgtccccgccgcc 127 |||||||||||||||||||||| Sbjct: 4004040 cgccgtccccgtccccgccgcc 4004061
>emb|AL731882.2|CNS08C8M Oryza sativa chromosome 12, . BAC OSJNBb0028H07 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 132682 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Plus Query: 106 cgccgtccccgtccccgccgcc 127 |||||||||||||||||||||| Sbjct: 40474 cgccgtccccgtccccgccgcc 40495
>gb|AC153695.2| Mus musculus 10 BAC RP23-184L5 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse 10 BAC Library) complete sequence Length = 209875 Score = 44.1 bits (22), Expect = 0.43 Identities = 25/26 (96%) Strand = Plus / Minus Query: 14 ctcttcttcctccttcccctgcttcc 39 |||||||||||||||||||| ||||| Sbjct: 133814 ctcttcttcctccttccccttcttcc 133789
>gb|M94870.1|SH1ULPK Suid herpesvirus 1 serine/threonine kinase gene, complete cds Length = 2202 Score = 44.1 bits (22), Expect = 0.43 Identities = 25/26 (96%) Strand = Plus / Minus Query: 109 cgtccccgtccccgccgccgccggcg 134 |||||||||||||| ||||||||||| Sbjct: 713 cgtccccgtccccgtcgccgccggcg 688
>ref|XM_550315.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3282 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 116 gtccccgccgccgccggcgag 136 ||||||||||||||||||||| Sbjct: 939 gtccccgccgccgccggcgag 919
>ref|NM_188303.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 456 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 111 tccccgtccccgccgccgccg 131 ||||||||||||||||||||| Sbjct: 79 tccccgtccccgccgccgccg 99
>ref|XM_481351.1| Oryza sativa (japonica cultivar-group), mRNA Length = 784 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 108 ccgtccccgtccccgccgccg 128 ||||||||||||||||||||| Sbjct: 133 ccgtccccgtccccgccgccg 113
>ref|XM_469835.1| Oryza sativa (japonica cultivar-group), mRNA Length = 945 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 106 cgccgtccccgtccccgccgccgccggcg 134 ||||||| ||||| ||||||||||||||| Sbjct: 327 cgccgtcgccgtcgccgccgccgccggcg 299
>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence Length = 3587082 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 357 gccggggccacctacaacctg 377 ||||||||||||||||||||| Sbjct: 1340426 gccggggccacctacaacctg 1340446
>ref|XM_473138.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 834 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 106 cgccgtccccgtccccgccgccgccggcg 134 ||||||| ||||| ||||||||||||||| Sbjct: 376 cgccgtcgccgtcgccgccgccgccggcg 348
>gb|AY020113.1| Oryza sativa microsatellite MRG2438 containing (CT)X19, genomic sequence Length = 238 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 15 tcttcttcctccttcccctgcttcc 39 ||||||||||||||||||| ||||| Sbjct: 65 tcttcttcctccttcccctccttcc 89
>gb|AC108821.6| Mus musculus chromosome 15, clone RP23-61D6, complete sequence Length = 216909 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 19 cttcctccttcccctgcttccccca 43 |||||||||||||||||||| |||| Sbjct: 102907 cttcctccttcccctgcttctccca 102931
>gb|AC121570.4| Mus musculus BAC clone RP23-228G6 from 16, complete sequence Length = 184174 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 23 ctccttcccctgcttccccca 43 ||||||||||||||||||||| Sbjct: 34631 ctccttcccctgcttccccca 34611
>gb|AC124187.3| Mus musculus BAC clone RP23-237I24 from 18, complete sequence Length = 172828 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 14 ctcttcttcctccttcccctgcttccccc 42 |||||||||||| ||||||| |||||||| Sbjct: 63267 ctcttcttcctctttccccttcttccccc 63239
>gb|AY372243.1| Psittacid herpesvirus 1 isolate 97-0001, complete genome Length = 163025 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 303 gacggccgcgccgcccacctg 323 ||||||||||||||||||||| Sbjct: 72461 gacggccgcgccgcccacctg 72481
>gb|AY341859.1| Oryza sativa (japonica cultivar-group) WRKY19 mRNA, complete cds Length = 1276 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 106 cgccgtccccgtccccgccgccgccggcg 134 ||||||| ||||| ||||||||||||||| Sbjct: 422 cgccgtcgccgtcgccgccgccgccggcg 394
>emb|AL121753.30|HSDJ614O4 Human DNA sequence from clone RP4-614O4 on chromosome 20q11.1-12 Contains the C20orf127 locus for a metallothionein protein pseudogene, the MMP24 gene for matrix metalloproteinase 24 (membrane-inserted), a novel gene, the ITGB4BP gene for integrin beta 4 binding protein, the C20orf120 gene for chromosome 20 open reading frame 120, the C20orf128 gene for chromosome 20 open reading frame 128, the 3' end of the C20orf44 gene for chromosome 20 open reading frame 44 and three CpG islands, complete sequence Length = 150481 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 19 cttcctccttcccctgcttcc 39 ||||||||||||||||||||| Sbjct: 58576 cttcctccttcccctgcttcc 58556
>emb|AL939109.1|SCO939109 Streptomyces coelicolor A3(2) complete genome; segment 6/29 Length = 277000 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 305 cggccgcgccgcccacctgctccag 329 ||||||||||||| ||||||||||| Sbjct: 145589 cggccgcgccgccgacctgctccag 145565
>emb|AL606622.3|OSJN00059 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0004N05, complete sequence Length = 158601 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 106 cgccgtccccgtccccgccgccgccggcg 134 ||||||| ||||| ||||||||||||||| Sbjct: 9792 cgccgtcgccgtcgccgccgccgccggcg 9820
>emb|AL606607.3|OSJN00068 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0065L13, complete sequence Length = 103039 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 106 cgccgtccccgtccccgccgccgccggcg 134 ||||||| ||||| ||||||||||||||| Sbjct: 101089 cgccgtcgccgtcgccgccgccgccggcg 101117
>emb|AJ632270.1| Actinoplanes teichomyceticus teicoplanin gene cluster Length = 89976 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 314 cgcccacctgctccaggccga 334 ||||||||||||||||||||| Sbjct: 35417 cgcccacctgctccaggccga 35397
>emb|AJ605139.1| Actinoplanes teichomyceticus gene cluster for biosynthesis of glycopeptide antibiotic teicoplanin Length = 89713 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 314 cgcccacctgctccaggccga 334 ||||||||||||||||||||| Sbjct: 42024 cgcccacctgctccaggccga 42004
>gb|AC024678.10| Homo sapiens chromosome 8, clone RP11-564K10, complete sequence Length = 170788 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 15 tcttcttcctccttcccctgc 35 ||||||||||||||||||||| Sbjct: 84223 tcttcttcctccttcccctgc 84203
>gb|AC159112.2| Pan troglodytes BAC clone CH251-495D16 from chromosome unknown, complete sequence Length = 134235 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 12 cactcttcttcctccttcccc 32 ||||||||||||||||||||| Sbjct: 118398 cactcttcttcctccttcccc 118378
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 106 cgccgtccccgtccccgccgccgccggcg 134 ||||||| ||||| ||||||||||||||| Sbjct: 25523596 cgccgtcgccgtcgccgccgccgccggcg 25523624
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 106 cgccgtccccgtccccgccgccgccggcg 134 ||||||| ||||| ||||||||||||||| Sbjct: 8012549 cgccgtcgccgtcgccgccgccgccggcg 8012521 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 111 tccccgtccccgccgccgcc 130 |||||||||||||||||||| Sbjct: 20269333 tccccgtccccgccgccgcc 20269352 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 8 cgtgcactcttcttcctccttccc 31 ||||| |||||||||||||||||| Sbjct: 2536757 cgtgccctcttcttcctccttccc 2536734
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 108 ccgtccccgtccccgccgccg 128 ||||||||||||||||||||| Sbjct: 11767145 ccgtccccgtccccgccgccg 11767165 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 112 ccccgtccccgccgccgccggcga 135 ||||||||||| |||||||||||| Sbjct: 15496105 ccccgtccccggcgccgccggcga 15496082 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 112 ccccgtccccgccgccgccg 131 |||||||||||||||||||| Sbjct: 3754290 ccccgtccccgccgccgccg 3754309
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 15 tcttcttcctccttcccctgcttcc 39 ||||||||||||||||||| ||||| Sbjct: 7477654 tcttcttcctccttcccctccttcc 7477678 Score = 40.1 bits (20), Expect = 6.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 104 ggcgccgtccccgtccccgccgccgccg 131 ||||||||||||| | |||||||||||| Sbjct: 27580193 ggcgccgtccccgccgccgccgccgccg 27580166
>gb|AC163761.3| Pan troglodytes BAC clone CH251-214O19 from chromosome unknown, complete sequence Length = 193316 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 19 cttcctccttcccctgcttcc 39 ||||||||||||||||||||| Sbjct: 34959 cttcctccttcccctgcttcc 34939
>gb|AC093085.4| Homo sapiens BAC clone RP11-732M2 from 2, complete sequence Length = 97959 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 18 tcttcctccttcccctgcttc 38 ||||||||||||||||||||| Sbjct: 29298 tcttcctccttcccctgcttc 29278
>dbj|AP002523.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0013F10 Length = 163095 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 116 gtccccgccgccgccggcgag 136 ||||||||||||||||||||| Sbjct: 80464 gtccccgccgccgccggcgag 80444
>dbj|AP005390.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBb0075O18 Length = 125411 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 108 ccgtccccgtccccgccgccg 128 ||||||||||||||||||||| Sbjct: 96845 ccgtccccgtccccgccgccg 96865
>dbj|AP004725.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0412C04 Length = 146849 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 15 tcttcttcctccttcccctgcttcc 39 ||||||||||||||||||| ||||| Sbjct: 37585 tcttcttcctccttcccctccttcc 37609
>dbj|AP006235.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0017N10 Length = 168535 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 106 cgccgtccccgtccccgccgccgccggcg 134 ||||||| ||||| ||||||||||||||| Sbjct: 125192 cgccgtcgccgtcgccgccgccgccggcg 125164
>dbj|AP005876.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0092O08 Length = 145596 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 106 cgccgtccccgtccccgccgccgccggcg 134 ||||||| ||||| ||||||||||||||| Sbjct: 27654 cgccgtcgccgtcgccgccgccgccggcg 27626
>dbj|AP004139.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1486_E07 Length = 110494 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 23 ctccttcccctgcttccccca 43 ||||||||||||||||||||| Sbjct: 67439 ctccttcccctgcttccccca 67459
>dbj|AP005108.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0461B08 Length = 153743 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 23 ctccttcccctgcttccccca 43 ||||||||||||||||||||| Sbjct: 148992 ctccttcccctgcttccccca 149012
>dbj|AP003918.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1705_A03 Length = 168689 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 108 ccgtccccgtccccgccgccg 128 ||||||||||||||||||||| Sbjct: 45430 ccgtccccgtccccgccgccg 45450
>dbj|AK107251.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-125-G03, full insert sequence Length = 1612 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 106 cgccgtccccgtccccgccgccgccggcg 134 ||||||| ||||| ||||||||||||||| Sbjct: 430 cgccgtcgccgtcgccgccgccgccggcg 402
>dbj|AK106879.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-118-E09, full insert sequence Length = 1724 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 23 ctccttcccctgcttccccca 43 ||||||||||||||||||||| Sbjct: 18 ctccttcccctgcttccccca 38
>dbj|AK102048.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033082A10, full insert sequence Length = 1046 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 106 cgccgtccccgtccccgccgccgccggcg 134 ||||||| ||||| ||||||||||||||| Sbjct: 439 cgccgtcgccgtcgccgccgccgccggcg 411
>dbj|AK071000.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023075F10, full insert sequence Length = 786 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 108 ccgtccccgtccccgccgccg 128 ||||||||||||||||||||| Sbjct: 134 ccgtccccgtccccgccgccg 114
>emb|AL359092.14| Human DNA sequence from clone RP11-57C19 on chromosome 9, complete sequence Length = 173463 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 12 cactcttcttcctccttcccc 32 ||||||||||||||||||||| Sbjct: 9217 cactcttcttcctccttcccc 9237
>gb|AC155268.1| Mus musculus BAC clone RP23-204K22 from 16, complete sequence Length = 218381 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 23 ctccttcccctgcttccccca 43 ||||||||||||||||||||| Sbjct: 141458 ctccttcccctgcttccccca 141438
>dbj|AK061055.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-205-H02, full insert sequence Length = 960 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 106 cgccgtccccgtccccgccgccgccggcg 134 ||||||| ||||| ||||||||||||||| Sbjct: 387 cgccgtcgccgtcgccgccgccgccggcg 359
>dbj|AK060650.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-027-H03, full insert sequence Length = 1015 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 106 cgccgtccccgtccccgccgccgccggcg 134 ||||||| ||||| ||||||||||||||| Sbjct: 382 cgccgtcgccgtcgccgccgccgccggcg 354
>gb|AC156809.2| Pan troglodytes BAC clone CH251-276J13 from chromosome unknown, complete sequence Length = 168055 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 12 cactcttcttcctccttcccc 32 ||||||||||||||||||||| Sbjct: 141329 cactcttcttcctccttcccc 141309
>gb|AC139375.3| Mus musculus chromosome 3, clone RP24-217F16, complete sequence Length = 152001 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 19 cttcctccttcccctgcttc 38 |||||||||||||||||||| Sbjct: 14841 cttcctccttcccctgcttc 14860
>gb|AC115830.6| Mus musculus chromosome 7, clone RP24-96A19, complete sequence Length = 153718 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 14 ctcttcttcctccttcccct 33 |||||||||||||||||||| Sbjct: 80862 ctcttcttcctccttcccct 80843
>gb|AC165289.2| Mus musculus BAC clone RP23-467L11 from chromosome 17, complete sequence Length = 193418 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 14 ctcttcttcctccttcccct 33 |||||||||||||||||||| Sbjct: 122264 ctcttcttcctccttcccct 122245 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 14 ctcttcttcctccttcccct 33 |||||||||||||||||||| Sbjct: 122169 ctcttcttcctccttcccct 122150
>ref|XM_481785.1| Oryza sativa (japonica cultivar-group), mRNA Length = 618 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 112 ccccgtccccgccgccgccggcga 135 ||||||||||| |||||||||||| Sbjct: 444 ccccgtccccggcgccgccggcga 421
>ref|XM_480227.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2139 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 112 ccccgtccccgccgccgccg 131 |||||||||||||||||||| Sbjct: 195 ccccgtccccgccgccgccg 176
>ref|XM_522111.1| PREDICTED: Pan troglodytes similar to trophoblast glycoprotein (LOC466712), mRNA Length = 1581 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 106 cgccgtccccgtccccgccg 125 |||||||||||||||||||| Sbjct: 844 cgccgtccccgtccccgccg 825
>ref|XM_469171.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1421 Score = 40.1 bits (20), Expect = 6.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 106 cgccgtccccgtccccgccgccgccggc 133 ||||||| ||||| |||||||||||||| Sbjct: 969 cgccgtcgccgtcgccgccgccgccggc 942
>ref|XM_467261.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1428 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 112 ccccgtccccgccgccgccg 131 |||||||||||||||||||| Sbjct: 91 ccccgtccccgccgccgccg 72
>ref|NM_189895.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1524 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 120 ccgccgccgccggcgagcgg 139 |||||||||||||||||||| Sbjct: 772 ccgccgccgccggcgagcgg 791
>ref|NM_191039.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 666 Score = 40.1 bits (20), Expect = 6.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 107 gccgtccccgtccccgccgccgccggcg 134 |||||| ||||| ||||||||||||||| Sbjct: 496 gccgtcgccgtcgccgccgccgccggcg 523
>ref|XM_476968.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2015 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 112 ccccgtccccgccgccgccg 131 |||||||||||||||||||| Sbjct: 206 ccccgtccccgccgccgccg 225
>gb|CP000081.1| Leishmania major chromosome 35, complete sequence Length = 2090491 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 425 cgtcttcctctcccccaccc 444 |||||||||||||||||||| Sbjct: 1874178 cgtcttcctctcccccaccc 1874197
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome Length = 6438405 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 303 gacggccgcgccgcccacctgctc 326 ||||||||||||||| |||||||| Sbjct: 488887 gacggccgcgccgccgacctgctc 488910
>gb|AC120307.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0074E19 map R1938, complete sequence Length = 160847 Score = 40.1 bits (20), Expect = 6.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 106 cgccgtccccgtccccgccgccgccggc 133 ||||||| ||||| |||||||||||||| Sbjct: 109944 cgccgtcgccgtcgccgccgccgccggc 109917
>gb|AC163329.6| Mus musculus chromosome 5, clone RP24-294K15, complete sequence Length = 186890 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 420 cccctcgtcttcctctcccc 439 |||||||||||||||||||| Sbjct: 60807 cccctcgtcttcctctcccc 60788 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 420 cccctcgtcttcctctcccc 439 |||||||||||||||||||| Sbjct: 60764 cccctcgtcttcctctcccc 60745
>ref|XM_369842.1| Magnaporthe grisea 70-15 hypothetical protein (MG06357.4) partial mRNA Length = 363 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 271 tccaccccaaggcggccctc 290 |||||||||||||||||||| Sbjct: 87 tccaccccaaggcggccctc 106
>ref|NM_199068.2| Mus musculus forkhead box K1 (Foxk1), transcript variant 1, mRNA Length = 7462 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 115 cgtccccgccgccgccggcg 134 |||||||||||||||||||| Sbjct: 140 cgtccccgccgccgccggcg 159
>ref|NM_010812.2| Mus musculus forkhead box K1 (Foxk1), transcript variant 2, mRNA Length = 1284 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 115 cgtccccgccgccgccggcg 134 |||||||||||||||||||| Sbjct: 140 cgtccccgccgccgccggcg 159
>gb|AC140331.2| Mus musculus BAC clone RP23-406J20 from chromosome 13, complete sequence Length = 192473 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 14 ctcttcttcctccttcccct 33 |||||||||||||||||||| Sbjct: 53591 ctcttcttcctccttcccct 53610
>gb|AC134583.5| Mus musculus BAC clone RP24-94C12 from chromosome 8, complete sequence Length = 184447 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 19 cttcctccttcccctgcttccccc 42 |||| ||||||||||||||||||| Sbjct: 84791 cttcttccttcccctgcttccccc 84768
>gb|CP000359.1| Deinococcus geothermalis DSM 11300, complete genome Length = 2467205 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 117 tccccgccgccgccggcgag 136 |||||||||||||||||||| Sbjct: 1619702 tccccgccgccgccggcgag 1619721
>gb|AC163010.2| Mus musculus chromosome 3, clone RP23-68L13, complete sequence Length = 172854 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 19 cttcctccttcccctgcttc 38 |||||||||||||||||||| Sbjct: 10009 cttcctccttcccctgcttc 9990
>gb|AC093474.7| Mus musculus chromosome 7, clone RP23-54H2, complete sequence Length = 202444 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 14 ctcttcttcctccttcccct 33 |||||||||||||||||||| Sbjct: 191979 ctcttcttcctccttcccct 191998
>gb|AY518220.1| Oryza sativa (indica cultivar-group) NBS-LRR-like protein A (NL-A), NBS-LRR-like protein B (NL-B), NBS-LRR-like protein C (NL-C), and NBS-LRR-like protein D (NL-D) genes, complete cds Length = 73617 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 120 ccgccgccgccggcgagcgg 139 |||||||||||||||||||| Sbjct: 11976 ccgccgccgccggcgagcgg 11957
>ref|XM_981418.1| PREDICTED: Mus musculus forkhead box K1 (Foxk1), mRNA Length = 3812 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 115 cgtccccgccgccgccggcg 134 |||||||||||||||||||| Sbjct: 137 cgtccccgccgccgccggcg 156
>gb|AC145387.2| Oryza sativa chromosome 3 BAC OSJNBb0031A14 genomic sequence, complete sequence Length = 44761 Score = 40.1 bits (20), Expect = 6.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 106 cgccgtccccgtccccgccgccgccggc 133 ||||||| ||||| |||||||||||||| Sbjct: 38736 cgccgtcgccgtcgccgccgccgccggc 38763
>gb|AC132342.3| Mus musculus BAC clone RP24-168N15 from chromosome 12, complete sequence Length = 165700 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 14 ctcttcttcctccttcccct 33 |||||||||||||||||||| Sbjct: 37716 ctcttcttcctccttcccct 37735
>gb|AC135792.3| Oryza sativa chromosome 3 BAC OSJNBa0056E06 genomic sequence, complete sequence Length = 140720 Score = 40.1 bits (20), Expect = 6.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 106 cgccgtccccgtccccgccgccgccggc 133 ||||||| ||||| |||||||||||||| Sbjct: 140127 cgccgtcgccgtcgccgccgccgccggc 140100
>emb|CT009577.5| Mouse DNA sequence from clone RP23-24C24 on chromosome 16, complete sequence Length = 258862 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 14 ctcttcttcctccttcccct 33 |||||||||||||||||||| Sbjct: 67452 ctcttcttcctccttcccct 67433
>emb|AJ853776.1| Scopulariopsis brevicaulis 18S rRNA gene (partial), 5.8S rRNA gene, 28S rRNA gene (partial), ITS1 and ITS2, strain WM 04.498 Length = 585 Score = 40.1 bits (20), Expect = 6.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 106 cgccgtccccgtccccgccgccgccggc 133 ||||||||||||||||| | |||||||| Sbjct: 107 cgccgtccccgtccccgtccccgccggc 134
>gb|AC130711.3| Mus musculus BAC clone RP23-22M24 from chromosome 17, complete sequence Length = 226651 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 15 tcttcttcctccttcccctg 34 |||||||||||||||||||| Sbjct: 126007 tcttcttcctccttcccctg 126026
>gb|AC136148.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0029K08, complete sequence Length = 136687 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 120 ccgccgccgccggcgagcgg 139 |||||||||||||||||||| Sbjct: 69832 ccgccgccgccggcgagcgg 69813
>gb|AC131710.3| Mus musculus BAC clone RP23-187M22 from 15, complete sequence Length = 224591 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 12 cactcttcttcctccttccc 31 |||||||||||||||||||| Sbjct: 218731 cactcttcttcctccttccc 218712
>emb|CR536601.8| Platypus DNA sequence from clone XX-307A9, complete sequence Length = 191674 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 16 cttcttcctccttcccctgc 35 |||||||||||||||||||| Sbjct: 43268 cttcttcctccttcccctgc 43249
>gb|AC098728.3| Mus musculus BAC clone RP23-3H22 from 15, complete sequence Length = 245757 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 12 cactcttcttcctccttccc 31 |||||||||||||||||||| Sbjct: 234978 cactcttcttcctccttccc 234997
>gb|AC079887.17| Oryza sativa (japonica cultivar-group) chromosome 3 BAC OSJNBa0040E01 genomic sequence, complete sequence Length = 168759 Score = 40.1 bits (20), Expect = 6.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 106 cgccgtccccgtccccgccgccgccggc 133 ||||||| ||||| |||||||||||||| Sbjct: 74810 cgccgtcgccgtcgccgccgccgccggc 74783
>gb|AC156574.2| Mus musculus BAC clone RP23-54L14 from chromosome 14, complete sequence Length = 208155 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 24 tccttcccctgcttccccca 43 |||||||||||||||||||| Sbjct: 169789 tccttcccctgcttccccca 169808
>gb|CP000284.1| Methylobacillus flagellatus KT, complete genome Length = 2971517 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 235 accacctcgtcgccctcgcc 254 |||||||||||||||||||| Sbjct: 648792 accacctcgtcgccctcgcc 648773
>gb|CP000316.1| Polaromonas sp. JS666, complete genome Length = 5200264 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 118 ccccgccgccgccggcgagc 137 |||||||||||||||||||| Sbjct: 4713258 ccccgccgccgccggcgagc 4713239
>ref|XM_790953.1| PREDICTED: Strongylocentrotus purpuratus hypothetical protein LOC591389 (LOC591389), partial mRNA Length = 1207 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 14 ctcttcttcctccttcccctgctt 37 |||||||||||||||| ||||||| Sbjct: 991 ctcttcttcctccttctcctgctt 968
>gb|BT009440.1| Triticum aestivum clone wlmk4.pk0019.f5:fis, full insert mRNA sequence Length = 1907 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 106 cgccgtccccgtccccgccgccgc 129 |||||||||| ||||||||||||| Sbjct: 319 cgccgtccccatccccgccgccgc 296
>gb|U55182.1|HSGOLF03 Homo sapiens Golf alpha gene, exons 6, 7, 8, 9, and 10 Length = 13452 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 28 tcccctgcttcccccaaata 47 |||||||||||||||||||| Sbjct: 6676 tcccctgcttcccccaaata 6695
>gb|AY625065.1| Scopulariopsis brevicaulis strain UAMH 7771 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence Length = 607 Score = 40.1 bits (20), Expect = 6.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 106 cgccgtccccgtccccgccgccgccggc 133 ||||||||||||||||| | |||||||| Sbjct: 129 cgccgtccccgtccccgtccccgccggc 156
>gb|AC163902.2| Mus musculus BAC clone RP23-479B18 from chromosome 17, complete sequence Length = 190411 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 18 tcttcctccttcccctgcttcccc 41 |||||||||||||||| ||||||| Sbjct: 152762 tcttcctccttccccttcttcccc 152739
>tpg|BK005006.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) WRKY transcription factor 3 (WRKY3) gene, complete cds Length = 3406 Score = 40.1 bits (20), Expect = 6.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 106 cgccgtccccgtccccgccgccgccggc 133 ||||||| ||||| |||||||||||||| Sbjct: 1656 cgccgtcgccgtcgccgccgccgccggc 1629
>gb|AC114491.1| Homo sapiens chromosome 1 clone RP11-270C12, complete sequence Length = 207698 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 14 ctcttcttcctccttcccct 33 |||||||||||||||||||| Sbjct: 93813 ctcttcttcctccttcccct 93832
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 122 gccgccgccggcgagcggag 141 |||||||||||||||||||| Sbjct: 2017483 gccgccgccggcgagcggag 2017464
>dbj|AK144418.1| Mus musculus 16 days neonate male diencephalon cDNA, RIKEN full-length enriched library, clone:G630063H05 product:forkhead box K1, full insert sequence Length = 2288 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 115 cgtccccgccgccgccggcg 134 |||||||||||||||||||| Sbjct: 33 cgtccccgccgccgccggcg 52
>dbj|AK147375.1| Mus musculus cDNA, RIKEN full-length enriched library, clone:M5C1024B13 product:forkhead box K1, full insert sequence Length = 7437 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 115 cgtccccgccgccgccggcg 134 |||||||||||||||||||| Sbjct: 138 cgtccccgccgccgccggcg 157
>ref|XM_940231.1| PREDICTED: Homo sapiens similar to trophoblast glycoprotein (LOC441617), mRNA Length = 1149 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 106 cgccgtccccgtccccgccg 125 |||||||||||||||||||| Sbjct: 256 cgccgtccccgtccccgccg 237
>ref|XM_497310.2| PREDICTED: Homo sapiens similar to trophoblast glycoprotein (LOC441617), mRNA Length = 1149 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 106 cgccgtccccgtccccgccg 125 |||||||||||||||||||| Sbjct: 256 cgccgtccccgtccccgccg 237
>gb|AC104179.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0021B21, from chromosome 3, complete sequence Length = 166777 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 108 ccgtccccgtccccgccgccgccg 131 |||||||||||| ||||||||||| Sbjct: 66480 ccgtccccgtccacgccgccgccg 66457
>gb|AC009027.10| Homo sapiens chromosome 16 clone RP11-123C5, complete sequence Length = 178256 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 407 cccgcgctccccgcccctcg 426 |||||||||||||||||||| Sbjct: 7826 cccgcgctccccgcccctcg 7807
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 241 tcgtcgccctcgccgacgcc 260 |||||||||||||||||||| Sbjct: 956316 tcgtcgccctcgccgacgcc 956335
>gb|AC159297.3| Mus musculus BAC clone RP23-258F9 from chromosome 12, complete sequence Length = 193434 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 14 ctcttcttcctccttcccct 33 |||||||||||||||||||| Sbjct: 36600 ctcttcttcctccttcccct 36581
>gb|AC009131.6|AC009131 Homo sapiens chromosome 16 clone RP11-502K10, complete sequence Length = 180835 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 407 cccgcgctccccgcccctcg 426 |||||||||||||||||||| Sbjct: 92366 cccgcgctccccgcccctcg 92347
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 120 ccgccgccgccggcgagcgg 139 |||||||||||||||||||| Sbjct: 21412082 ccgccgccgccggcgagcgg 21412063 Score = 40.1 bits (20), Expect = 6.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 106 cgccgtccccgtccccgccgccgccggc 133 ||||||| ||||| |||||||||||||| Sbjct: 2333945 cgccgtcgccgtcgccgccgccgccggc 2333918
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 112 ccccgtccccgccgccgccg 131 |||||||||||||||||||| Sbjct: 4968255 ccccgtccccgccgccgccg 4968274
>gb|AC153849.8| Mus musculus BAC RP23-97L11 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 205220 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 14 ctcttcttcctccttcccct 33 |||||||||||||||||||| Sbjct: 96117 ctcttcttcctccttcccct 96136
>gb|AC154469.3| Mus musculus BAC clone RP24-158M15 from chromosome 17, complete sequence Length = 151047 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 14 ctcttcttcctccttcccct 33 |||||||||||||||||||| Sbjct: 77842 ctcttcttcctccttcccct 77861
>gb|AC084319.5|AC084319 Oryza sativa chromosome 3 BAC OSJNBa0004B24 genomic sequence, complete sequence Length = 152883 Score = 40.1 bits (20), Expect = 6.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 241 tcgtcgccctcgccgacgccttcccctc 268 |||||| |||||||| |||||||||||| Sbjct: 21441 tcgtcggcctcgccgtcgccttcccctc 21468
>gb|AE004805.1| Pseudomonas aeruginosa PAO1, section 366 of 529 of the complete genome Length = 10637 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 245 cgccctcgccgacgccttcc 264 |||||||||||||||||||| Sbjct: 7499 cgccctcgccgacgccttcc 7518
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 114 ccgtccccgccgccgccggcgagc 137 |||||||| ||||||||||||||| Sbjct: 4203282 ccgtcccccccgccgccggcgagc 4203305
>gb|AF474071.1| Hordeum vulgare subsp. vulgare cultivar Morex BAC clone 745c13, complete sequence Length = 102842 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 423 ctcgtcttcctctcccccac 442 |||||||||||||||||||| Sbjct: 29190 ctcgtcttcctctcccccac 29171
>gb|AC135157.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1017C11, complete sequence Length = 166072 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 14 ctcttcttcctccttcccct 33 |||||||||||||||||||| Sbjct: 98746 ctcttcttcctccttcccct 98727
>dbj|AP003260.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0468B07 Length = 169071 Score = 40.1 bits (20), Expect = 6.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 107 gccgtccccgtccccgccgccgccggcg 134 |||||| ||||| ||||||||||||||| Sbjct: 133838 gccgtcgccgtcgccgccgccgccggcg 133865
>dbj|AP003436.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0470A12 Length = 185095 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 120 ccgccgccgccggcgagcgg 139 |||||||||||||||||||| Sbjct: 86927 ccgccgccgccggcgagcgg 86946
>dbj|AP005847.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ9990_A01 Length = 101684 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 112 ccccgtccccgccgccgccg 131 |||||||||||||||||||| Sbjct: 77787 ccccgtccccgccgccgccg 77806
>dbj|AP005605.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1449_C01 Length = 192857 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 112 ccccgtccccgccgccgccg 131 |||||||||||||||||||| Sbjct: 19507 ccccgtccccgccgccgccg 19526
>dbj|AP005583.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0406E03 Length = 201069 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 8 cgtgcactcttcttcctccttccc 31 ||||| |||||||||||||||||| Sbjct: 123347 cgtgccctcttcttcctccttccc 123324
>dbj|AP004786.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0017H11 Length = 158374 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 112 ccccgtccccgccgccgccg 131 |||||||||||||||||||| Sbjct: 101234 ccccgtccccgccgccgccg 101253
>dbj|AP003247.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0425G02 Length = 155432 Score = 40.1 bits (20), Expect = 6.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 107 gccgtccccgtccccgccgccgccggcg 134 |||||| ||||| ||||||||||||||| Sbjct: 27213 gccgtcgccgtcgccgccgccgccggcg 27240
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 6.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 106 cgccgtccccgtccccgccgccgccggc 133 |||||| ||||||| ||||||||||||| Sbjct: 3342671 cgccgtgcccgtcctcgccgccgccggc 3342698
>dbj|AP005681.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1439_F07 Length = 153743 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 111 tccccgtccccgccgccgcc 130 |||||||||||||||||||| Sbjct: 48460 tccccgtccccgccgccgcc 48479
>dbj|AP006454.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:B1472F02 Length = 55065 Score = 40.1 bits (20), Expect = 6.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 104 ggcgccgtccccgtccccgccgccgccg 131 ||||||||||||| | |||||||||||| Sbjct: 21887 ggcgccgtccccgccgccgccgccgccg 21860
>dbj|AP005864.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0047P18 Length = 169128 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 111 tccccgtccccgccgccgcc 130 |||||||||||||||||||| Sbjct: 162833 tccccgtccccgccgccgcc 162852
>dbj|AP005124.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0049I08 Length = 144379 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 112 ccccgtccccgccgccgccg 131 |||||||||||||||||||| Sbjct: 9944 ccccgtccccgccgccgccg 9963
>dbj|AP005173.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0003E08 Length = 161095 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 112 ccccgtccccgccgccgccg 131 |||||||||||||||||||| Sbjct: 153739 ccccgtccccgccgccgccg 153758
>gb|BC082808.1| Mus musculus FERM domain containing 4A, mRNA (cDNA clone IMAGE:6856382), containing frame-shift errors Length = 6785 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 108 ccgtccccgtccccgccgccgccg 131 ||||||||||||||||| |||||| Sbjct: 442 ccgtccccgtccccgcccccgccg 419
>gb|AE005006.1| Halobacterium sp. NRC-1 section 37 of 170 of the complete genome Length = 13283 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 390 tggctgcccgagacctacccgcgc 413 ||||||||||| |||||||||||| Sbjct: 11081 tggctgcccgacacctacccgcgc 11058
>dbj|AB113399.1| Rattus norvegicus rCNR gene for cadherin-related neuronal receptor, exon cluster Length = 249555 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 14 ctcttcttcctccttcccct 33 |||||||||||||||||||| Sbjct: 200821 ctcttcttcctccttcccct 200840
>dbj|AP004645.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1119_B10 Length = 148508 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 112 ccccgtccccgccgccgccggcga 135 ||||||||||| |||||||||||| Sbjct: 43863 ccccgtccccggcgccgccggcga 43840
>dbj|AK057909.1| Homo sapiens cDNA FLJ25180 fis, clone CBR09247 Length = 2289 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 14 ctcttcttcctccttcccct 33 |||||||||||||||||||| Sbjct: 1692 ctcttcttcctccttcccct 1711
>dbj|AP003157.2| Mus musculus genomic DNA, chromosome 16q clone:RP21-617H16, complete sequence Length = 31510 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 120 ccgccgccgccggcgagcgg 139 |||||||||||||||||||| Sbjct: 16799 ccgccgccgccggcgagcgg 16818
>dbj|AK099718.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013088A21, full insert sequence Length = 2015 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 112 ccccgtccccgccgccgccg 131 |||||||||||||||||||| Sbjct: 206 ccccgtccccgccgccgccg 225
>dbj|AK106838.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-116-G10, full insert sequence Length = 2137 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 112 ccccgtccccgccgccgccg 131 |||||||||||||||||||| Sbjct: 193 ccccgtccccgccgccgccg 174
>dbj|AK099276.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023105H10, full insert sequence Length = 2393 Score = 40.1 bits (20), Expect = 6.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 241 tcgtcgccctcgccgacgccttcccctc 268 |||||| |||||||| |||||||||||| Sbjct: 293 tcgtcggcctcgccgtcgccttcccctc 320
>dbj|AK071877.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013040J18, full insert sequence Length = 2218 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 111 tccccgtccccgccgccgcc 130 |||||||||||||||||||| Sbjct: 994 tccccgtccccgccgccgcc 975
>dbj|AK070389.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023048I16, full insert sequence Length = 2466 Score = 40.1 bits (20), Expect = 6.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 241 tcgtcgccctcgccgacgccttcccctc 268 |||||| |||||||| |||||||||||| Sbjct: 366 tcgtcggcctcgccgtcgccttcccctc 393
>dbj|AK067882.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013122N14, full insert sequence Length = 2236 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 118 ccccgccgccgccggcgagc 137 |||||||||||||||||||| Sbjct: 98 ccccgccgccgccggcgagc 79
>dbj|AK066202.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013056K06, full insert sequence Length = 1308 Score = 40.1 bits (20), Expect = 6.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 106 cgccgtccccgtccccgccgccgccggc 133 ||||||| ||||| |||||||||||||| Sbjct: 856 cgccgtcgccgtcgccgccgccgccggc 829
>dbj|AK066054.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013050P13, full insert sequence Length = 1336 Score = 40.1 bits (20), Expect = 6.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 104 ggcgccgtccccgtccccgccgccgccg 131 ||||||||||||| | |||||||||||| Sbjct: 185 ggcgccgtccccgccgccgccgccgccg 212
>gb|AC154769.2| Mus musculus BAC clone RP24-447K12 from 17, complete sequence Length = 157247 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 18 tcttcctccttcccctgcttcccc 41 |||||||||||||||| ||||||| Sbjct: 154028 tcttcctccttccccttcttcccc 154051
>gb|AC102839.24| Mus musculus chromosome 5, clone RP24-343D8, complete sequence Length = 196090 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 115 cgtccccgccgccgccggcg 134 |||||||||||||||||||| Sbjct: 70930 cgtccccgccgccgccggcg 70911
>gb|AY450930.1| Chlamydomonas reinhardtii plus agglutinin (SAG1) gene, complete cds; and unknown gene Length = 18555 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 120 ccgccgccgccggcgagcgg 139 |||||||||||||||||||| Sbjct: 9184 ccgccgccgccggcgagcgg 9203
>gb|AC107709.12| Mus musculus chromosome 5, clone RP23-60E7, complete sequence Length = 256771 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 420 cccctcgtcttcctctcccc 439 |||||||||||||||||||| Sbjct: 72771 cccctcgtcttcctctcccc 72790 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 420 cccctcgtcttcctctcccc 439 |||||||||||||||||||| Sbjct: 72728 cccctcgtcttcctctcccc 72747
>dbj|AP001972.4| Homo sapiens genomic DNA, chromosome 11q, clone:CTD-2562J17, complete sequences Length = 215225 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 106 cgccgtccccgtccccgccg 125 |||||||||||||||||||| Sbjct: 144715 cgccgtccccgtccccgccg 144696
>emb|AL929233.9| Mouse DNA sequence from clone RP23-388H13 on chromosome 2, complete sequence Length = 133534 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 14 ctcttcttcctccttcccct 33 |||||||||||||||||||| Sbjct: 69559 ctcttcttcctccttcccct 69540
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 120 ccgccgccgccggcgagcgg 139 |||||||||||||||||||| Sbjct: 21722281 ccgccgccgccggcgagcgg 21722262 Score = 40.1 bits (20), Expect = 6.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 106 cgccgtccccgtccccgccgccgccggc 133 ||||||| ||||| |||||||||||||| Sbjct: 2341726 cgccgtcgccgtcgccgccgccgccggc 2341699
>emb|AL928947.10| Mouse DNA sequence from clone RP23-69N1 on chromosome 2, complete sequence Length = 76640 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 108 ccgtccccgtccccgccgccgccg 131 ||||||||||||||||| |||||| Sbjct: 41236 ccgtccccgtccccgcccccgccg 41213
>emb|CT030702.11| Mouse DNA sequence from clone RP23-76I16 on chromosome 17, complete sequence Length = 222733 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 14 ctcttcttcctccttcccct 33 |||||||||||||||||||| Sbjct: 34050 ctcttcttcctccttcccct 34031 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 14 ctcttcttcctccttcccct 33 |||||||||||||||||||| Sbjct: 33955 ctcttcttcctccttcccct 33936
>emb|CT010429.11| Mouse DNA sequence from clone RP23-306H20 on chromosome 17, complete sequence Length = 191390 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 14 ctcttcttcctccttcccct 33 |||||||||||||||||||| Sbjct: 128947 ctcttcttcctccttcccct 128928
>emb|CT030190.9| Mouse DNA sequence from clone RP23-115D20 on chromosome 16, complete sequence Length = 228196 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 120 ccgccgccgccggcgagcgg 139 |||||||||||||||||||| Sbjct: 109756 ccgccgccgccggcgagcgg 109775
>gb|AC145935.3| Gallus gallus BAC clone CH261-42P15 from chromosome unknown, complete sequence Length = 194387 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 305 cggccgcgccgcccacctgc 324 |||||||||||||||||||| Sbjct: 73972 cggccgcgccgcccacctgc 73953
>gb|BC060238.1| Mus musculus forkhead box K1, mRNA (cDNA clone IMAGE:6853263), containing frame-shift errors Length = 5095 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 115 cgtccccgccgccgccggcg 134 |||||||||||||||||||| Sbjct: 120 cgtccccgccgccgccggcg 139
>gb|AC133938.4| Mus musculus BAC clone RP23-399J17 from 3, complete sequence Length = 208906 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 15 tcttcttcctccttcccctgcttc 38 ||||||||||||||||||| |||| Sbjct: 134303 tcttcttcctccttcccctccttc 134280
>emb|CT025564.10| Mouse DNA sequence from clone RP24-123J6 on chromosome 14, complete sequence Length = 165380 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 24 tccttcccctgcttccccca 43 |||||||||||||||||||| Sbjct: 159626 tccttcccctgcttccccca 159645
>emb|AL606932.10| Mouse DNA sequence from clone RP23-247I20 on chromosome 4, complete sequence Length = 188633 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 12 cactcttcttcctccttccc 31 |||||||||||||||||||| Sbjct: 43804 cactcttcttcctccttccc 43785
>emb|AL671911.12| Mouse DNA sequence from clone RP23-250F8 on chromosome X, complete sequence Length = 213401 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 19 cttcctccttcccctgcttccccc 42 ||||||||||||||| |||||||| Sbjct: 191282 cttcctccttccccttcttccccc 191259
>dbj|AP001269.4| Homo sapiens genomic DNA, chromosome 18 clone:RP11-820I16, complete sequences Length = 146181 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 28 tcccctgcttcccccaaata 47 |||||||||||||||||||| Sbjct: 2417 tcccctgcttcccccaaata 2436
>dbj|AP005137.2| Homo sapiens genomic DNA, chromosome 18p clone:RP11-78A19, complete sequences Length = 80992 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 28 tcccctgcttcccccaaata 47 |||||||||||||||||||| Sbjct: 80847 tcccctgcttcccccaaata 80866 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,167,634 Number of Sequences: 3902068 Number of extensions: 4167634 Number of successful extensions: 146320 Number of sequences better than 10.0: 183 Number of HSP's better than 10.0 without gapping: 202 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 138917 Number of HSP's gapped (non-prelim): 7391 length of query: 494 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 472 effective length of database: 17,147,199,772 effective search space: 8093478292384 effective search space used: 8093478292384 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
