| Clone Name | bast78f04 |
|---|---|
| Clone Library Name | barley_pub |
>gb|U46003.1|HVU46003 Hordeum vulgare beta-D-glucan exohydrolase, isoenzyme ExoII, mRNA, complete cds Length = 2105 Score = 829 bits (418), Expect = 0.0 Identities = 421/422 (99%) Strand = Plus / Plus Query: 1 cggggtttcgtgatttcagactggcaaggcattgatcggattactagccctccaggcgtg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 923 cggggtttcgtgatttcagactggcaaggcattgatcggattactagccctccaggcgtg 982 Query: 61 aactattcttattcagttgaggctggagttggtgccggtattgacatgatcatggttcct 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 983 aactattcttattcagttgaggctggagttggtgccggtattgacatgatcatggttcct 1042 Query: 121 tttgcctacacagaattcattgatgatctgacataccaagttaagaacaacatcatcccc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1043 tttgcctacacagaattcattgatgatctgacataccaagttaagaacaacatcatcccc 1102 Query: 181 atgagcagaatcaacgatgctgtctacaggattctcagggtgaagttcaccatgggtcta 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1103 atgagcagaatcaacgatgctgtctacaggattctcagggtgaagttcaccatgggtcta 1162 Query: 241 tttgagagcccctatgctgacccaagcctcgttggtgaactcgggaagcaggaacaccgc 300 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1163 tttgagagcccctatgctgacccaagcctcgttggtgaactcgggaagcaggaacaccgt 1222 Query: 301 gatcttgctcgtgaggccgtcaggaagtcattggtgttgctgaaaaatggaaaatctgcc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1223 gatcttgctcgtgaggccgtcaggaagtcattggtgttgctgaaaaatggaaaatctgcc 1282 Query: 361 tccactccattgttgcctctcccaaagaaggccggtaagatcctcgtcgctggaagccac 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1283 tccactccattgttgcctctcccaaagaaggccggtaagatcctcgtcgctggaagccac 1342 Query: 421 gc 422 || Sbjct: 1343 gc 1344
>gb|AY091513.1| Triticum aestivum beta-D-glucan exohydrolase mRNA, complete cds Length = 2116 Score = 749 bits (378), Expect = 0.0 Identities = 411/422 (97%) Strand = Plus / Plus Query: 1 cggggtttcgtgatttcagactggcaaggcattgatcggattactagccctccaggcgtg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 898 cggggtttcgtgatttcagactggcaaggcattgatcggattactagccctccaggcgtg 957 Query: 61 aactattcttattcagttgaggctggagttggtgccggtattgacatgatcatggttcct 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 958 aactattcttattcagttgaggctggagttggtgccggtattgacatgatcatggttcct 1017 Query: 121 tttgcctacacagaattcattgatgatctgacataccaagttaagaacaacatcatcccc 180 | ||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 1018 tatgcctacacggaattcattgatgatctgacataccaagttaagaacaacattatcccc 1077 Query: 181 atgagcagaatcaacgatgctgtctacaggattctcagggtgaagttcaccatgggtcta 240 ||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 1078 atgagcagaattgacgatgctgtctacaggattcttcgggtgaagttcaccatgggtcta 1137 Query: 241 tttgagagcccctatgctgacccaagcctcgttggtgaactcgggaagcaggaacaccgc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1138 tttgagagcccctatgctgacccaagcctcgttggtgaactcgggaagcaggaacaccgc 1197 Query: 301 gatcttgctcgtgaggccgtcaggaagtcattggtgttgctgaaaaatggaaaatctgcc 360 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 1198 gatcttgctcgtgaggccgtcaggaagtcattggtgctgctgaaaaatggaaaatctgcc 1257 Query: 361 tccactccattgttgcctctcccaaagaaggccggtaagatcctcgtcgctggaagccac 420 |||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 1258 tccagcccattgttgcctctcccaaagaaggccggtaagatcctcgtcgccggaagccac 1317 Query: 421 gc 422 || Sbjct: 1318 gc 1319
>gb|AY586531.1| Secale cereale cell wall beta-glucosidase mRNA, complete cds Length = 2215 Score = 694 bits (350), Expect = 0.0 Identities = 404/422 (95%) Strand = Plus / Plus Query: 1 cggggtttcgtgatttcagactggcaaggcattgatcggattactagccctccaggcgtg 60 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 1080 cggggtttcgtgatttcagactggcaaggcattgatcggattactagtcctccaggcgtg 1139 Query: 61 aactattcttattcagttgaggctggagttggtgccggtattgacatgatcatggttcct 120 |||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||| Sbjct: 1140 aactattcttattcagttgaggctggcgttggtgccggtattgacatgatcatgggtcct 1199 Query: 121 tttgcctacacagaattcattgatgatctgacataccaagttaagaacaacatcatcccc 180 | ||||||||| | ||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 1200 tatgcctacacgcagttcattgatgatctgacctaccaagttaagaacaacatcatcccc 1259 Query: 181 atgagcagaatcaacgatgctgtctacaggattctcagggtgaagttcaccatgggtcta 240 |||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 1260 atgagcagaatcgacgatgctgtctacaggattcttagggtgaagttcaccatgggtcta 1319 Query: 241 tttgagagcccctatgctgacccaagcctcgttggtgaactcgggaagcaggaacaccgc 300 ||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| ||| Sbjct: 1320 tttgagagcccttatgctgacccaagcctcgtcggtgaactcgggaagcaggaacatcgc 1379 Query: 301 gatcttgctcgtgaggccgtcaggaagtcattggtgttgctgaaaaatggaaaatctgcc 360 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1380 gatctcgctcgtgaggccgtcaggaagtcattggtgttgctgaaaaatggaaaatctgcc 1439 Query: 361 tccactccattgttgcctctcccaaagaaggccggtaagatcctcgtcgctggaagccac 420 ||| |||| |||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 1440 tccgctccgctgttgcctctcccaaagaaggccggtaagatcctcgtcgccggaagccac 1499 Query: 421 gc 422 || Sbjct: 1500 gc 1501
>ref|XM_469751.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2156 Score = 297 bits (150), Expect = 1e-77 Identities = 351/418 (83%) Strand = Plus / Plus Query: 2 ggggtttcgtgatttcagactggcaaggcattgatcggattactagccctccaggcgtga 61 ||||||| |||||||| ||||||||||||||||| ||||| ||| ||||| || Sbjct: 1177 ggggttttgtgatttctgactggcaaggcattgaccggatcacttctcctccgcataaga 1236 Query: 62 actattcttattcagttgaggctggagttggtgccggtattgacatgatcatggttcctt 121 |||||||||| ||| | ||||||||| |||||||||| |||||||||||||||||||||| Sbjct: 1237 actattcttactcaatcgaggctggaattggtgccggcattgacatgatcatggttcctt 1296 Query: 122 ttgcctacacagaattcattgatgatctgacataccaagttaagaacaacatcatcccca 181 | |||||||||||||||||||||| |||||| | |||||||| ||||| || ||||||| Sbjct: 1297 atacctacacagaattcattgatgacctgacagagcaagttaacaacaaaattatcccca 1356 Query: 182 tgagcagaatcaacgatgctgtctacaggattctcagggtgaagttcaccatgggtctat 241 |||||||||| ||||||||||||||||||||||| | || ||||||||||||||||||| Sbjct: 1357 tgagcagaattgacgatgctgtctacaggattctccgagtcaagttcaccatgggtctat 1416 Query: 242 ttgagagcccctatgctgacccaagcctcgttggtgaactcgggaagcaggaacaccgcg 301 |||||||||| | ||||||| | ||||||| | |||||| || ||||| || ||||| | Sbjct: 1417 ttgagagcccttttgctgactctagcctcgccgatgaacttggaaagcaagagcaccgtg 1476 Query: 302 atcttgctcgtgaggccgtcaggaagtcattggtgttgctgaaaaatggaaaatctgcct 361 | || || || || || ||||||||||| |||||| ||||||| || |||||||| ||| Sbjct: 1477 agctcgcgcgcgaagcggtcaggaagtccttggtgctgctgaagaacggaaaatcctcct 1536 Query: 362 ccactccattgttgcctctcccaaagaaggccggtaagatcctcgtcgctggaagcca 419 | |||| || | || ||||| ||||| |||||||| || |||||||| |||||||| Sbjct: 1537 actctccggtgcttcccctcccgaagaaagccggtaaaattctcgtcgcgggaagcca 1594
>dbj|AK122100.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033125I15, full insert sequence Length = 2144 Score = 297 bits (150), Expect = 1e-77 Identities = 351/418 (83%) Strand = Plus / Plus Query: 2 ggggtttcgtgatttcagactggcaaggcattgatcggattactagccctccaggcgtga 61 ||||||| |||||||| ||||||||||||||||| ||||| ||| ||||| || Sbjct: 917 ggggttttgtgatttctgactggcaaggcattgaccggatcacttctcctccgcataaga 976 Query: 62 actattcttattcagttgaggctggagttggtgccggtattgacatgatcatggttcctt 121 |||||||||| ||| | ||||||||| |||||||||| |||||||||||||||||||||| Sbjct: 977 actattcttactcaatcgaggctggaattggtgccggcattgacatgatcatggttcctt 1036 Query: 122 ttgcctacacagaattcattgatgatctgacataccaagttaagaacaacatcatcccca 181 | |||||||||||||||||||||| |||||| | |||||||| ||||| || ||||||| Sbjct: 1037 atacctacacagaattcattgatgacctgacagagcaagttaacaacaaaattatcccca 1096 Query: 182 tgagcagaatcaacgatgctgtctacaggattctcagggtgaagttcaccatgggtctat 241 |||||||||| ||||||||||||||||||||||| | || ||||||||||||||||||| Sbjct: 1097 tgagcagaattgacgatgctgtctacaggattctccgagtcaagttcaccatgggtctat 1156 Query: 242 ttgagagcccctatgctgacccaagcctcgttggtgaactcgggaagcaggaacaccgcg 301 |||||||||| | ||||||| | ||||||| | |||||| || ||||| || ||||| | Sbjct: 1157 ttgagagcccttttgctgactctagcctcgccgatgaacttggaaagcaagagcaccgtg 1216 Query: 302 atcttgctcgtgaggccgtcaggaagtcattggtgttgctgaaaaatggaaaatctgcct 361 | || || || || || ||||||||||| |||||| ||||||| || |||||||| ||| Sbjct: 1217 agctcgcgcgcgaagcggtcaggaagtccttggtgctgctgaagaacggaaaatcctcct 1276 Query: 362 ccactccattgttgcctctcccaaagaaggccggtaagatcctcgtcgctggaagcca 419 | |||| || | || ||||| ||||| |||||||| || |||||||| |||||||| Sbjct: 1277 actctccggtgcttcccctcccgaagaaagccggtaaaattctcgtcgcgggaagcca 1334
>dbj|AK119203.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-041-D08, full insert sequence Length = 1675 Score = 297 bits (150), Expect = 1e-77 Identities = 351/418 (83%) Strand = Plus / Plus Query: 2 ggggtttcgtgatttcagactggcaaggcattgatcggattactagccctccaggcgtga 61 ||||||| |||||||| ||||||||||||||||| ||||| ||| ||||| || Sbjct: 449 ggggttttgtgatttctgactggcaaggcattgaccggatcacttctcctccgcataaga 508 Query: 62 actattcttattcagttgaggctggagttggtgccggtattgacatgatcatggttcctt 121 |||||||||| ||| | ||||||||| |||||||||| |||||||||||||||||||||| Sbjct: 509 actattcttactcaatcgaggctggaattggtgccggcattgacatgatcatggttcctt 568 Query: 122 ttgcctacacagaattcattgatgatctgacataccaagttaagaacaacatcatcccca 181 | |||||||||||||||||||||| |||||| | |||||||| ||||| || ||||||| Sbjct: 569 atacctacacagaattcattgatgacctgacagagcaagttaacaacaaaattatcccca 628 Query: 182 tgagcagaatcaacgatgctgtctacaggattctcagggtgaagttcaccatgggtctat 241 |||||||||| ||||||||||||||||||||||| | || ||||||||||||||||||| Sbjct: 629 tgagcagaattgacgatgctgtctacaggattctccgagtcaagttcaccatgggtctat 688 Query: 242 ttgagagcccctatgctgacccaagcctcgttggtgaactcgggaagcaggaacaccgcg 301 |||||||||| | ||||||| | ||||||| | |||||| || ||||| || ||||| | Sbjct: 689 ttgagagcccttttgctgactctagcctcgccgatgaacttggaaagcaagagcaccgtg 748 Query: 302 atcttgctcgtgaggccgtcaggaagtcattggtgttgctgaaaaatggaaaatctgcct 361 | || || || || || ||||||||||| |||||| ||||||| || |||||||| ||| Sbjct: 749 agctcgcgcgcgaagcggtcaggaagtccttggtgctgctgaagaacggaaaatcctcct 808 Query: 362 ccactccattgttgcctctcccaaagaaggccggtaagatcctcgtcgctggaagcca 419 | |||| || | || ||||| ||||| |||||||| || |||||||| |||||||| Sbjct: 809 actctccggtgcttcccctcccgaagaaagccggtaaaattctcgtcgcgggaagcca 866
>dbj|AK065044.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001H22, full insert sequence Length = 3093 Score = 297 bits (150), Expect = 1e-77 Identities = 351/418 (83%) Strand = Plus / Plus Query: 2 ggggtttcgtgatttcagactggcaaggcattgatcggattactagccctccaggcgtga 61 ||||||| |||||||| ||||||||||||||||| ||||| ||| ||||| || Sbjct: 1867 ggggttttgtgatttctgactggcaaggcattgaccggatcacttctcctccgcataaga 1926 Query: 62 actattcttattcagttgaggctggagttggtgccggtattgacatgatcatggttcctt 121 |||||||||| ||| | ||||||||| |||||||||| |||||||||||||||||||||| Sbjct: 1927 actattcttactcaatcgaggctggaattggtgccggcattgacatgatcatggttcctt 1986 Query: 122 ttgcctacacagaattcattgatgatctgacataccaagttaagaacaacatcatcccca 181 | |||||||||||||||||||||| |||||| | |||||||| ||||| || ||||||| Sbjct: 1987 atacctacacagaattcattgatgacctgacagagcaagttaacaacaaaattatcccca 2046 Query: 182 tgagcagaatcaacgatgctgtctacaggattctcagggtgaagttcaccatgggtctat 241 |||||||||| ||||||||||||||||||||||| | || ||||||||||||||||||| Sbjct: 2047 tgagcagaattgacgatgctgtctacaggattctccgagtcaagttcaccatgggtctat 2106 Query: 242 ttgagagcccctatgctgacccaagcctcgttggtgaactcgggaagcaggaacaccgcg 301 |||||||||| | ||||||| | ||||||| | |||||| || ||||| || ||||| | Sbjct: 2107 ttgagagcccttttgctgactctagcctcgccgatgaacttggaaagcaagagcaccgtg 2166 Query: 302 atcttgctcgtgaggccgtcaggaagtcattggtgttgctgaaaaatggaaaatctgcct 361 | || || || || || ||||||||||| |||||| ||||||| || |||||||| ||| Sbjct: 2167 agctcgcgcgcgaagcggtcaggaagtccttggtgctgctgaagaacggaaaatcctcct 2226 Query: 362 ccactccattgttgcctctcccaaagaaggccggtaagatcctcgtcgctggaagcca 419 | |||| || | || ||||| ||||| |||||||| || |||||||| |||||||| Sbjct: 2227 actctccggtgcttcccctcccgaagaaagccggtaaaattctcgtcgcgggaagcca 2284
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 190 bits (96), Expect = 3e-45 Identities = 147/164 (89%) Strand = Plus / Plus Query: 108 gatcatggttccttttgcctacacagaattcattgatgatctgacataccaagttaagaa 167 |||||||||||||| | |||||||||||||||||||||| |||||| | |||||||| || Sbjct: 30563562 gatcatggttccttatacctacacagaattcattgatgacctgacagagcaagttaacaa 30563621 Query: 168 caacatcatccccatgagcagaatcaacgatgctgtctacaggattctcagggtgaagtt 227 ||| || ||||||||||||||||| ||||||||||||||||||||||| | || ||||| Sbjct: 30563622 caaaattatccccatgagcagaattgacgatgctgtctacaggattctccgagtcaagtt 30563681 Query: 228 caccatgggtctatttgagagcccctatgctgacccaagcctcg 271 |||||||||||||||||||||||| | ||||||| | ||||||| Sbjct: 30563682 caccatgggtctatttgagagcccttttgctgactctagcctcg 30563725 Score = 67.9 bits (34), Expect = 3e-08 Identities = 88/106 (83%) Strand = Plus / Plus Query: 3 gggtttcgtgatttcagactggcaaggcattgatcggattactagccctccaggcgtgaa 62 |||||| |||||||| ||||||||||||||||| ||||| ||| ||||| ||| Sbjct: 30563113 gggttttgtgatttctgactggcaaggcattgaccggatcacttctcctccgcataagaa 30563172 Query: 63 ctattcttattcagttgaggctggagttggtgccggtattgacatg 108 ||||||||| ||| | ||||||||| |||||||||| ||||||||| Sbjct: 30563173 ctattcttactcaatcgaggctggaattggtgccggcattgacatg 30563218 Score = 58.0 bits (29), Expect = 2e-05 Identities = 83/101 (82%) Strand = Plus / Plus Query: 319 gtcaggaagtcattggtgttgctgaaaaatggaaaatctgcctccactccattgttgcct 378 ||||||||||| |||||| ||||||| || |||||||| ||| | |||| || | || Sbjct: 30563860 gtcaggaagtccttggtgctgctgaagaacggaaaatcctcctactctccggtgcttccc 30563919 Query: 379 ctcccaaagaaggccggtaagatcctcgtcgctggaagcca 419 ||||| ||||| |||||||| || |||||||| |||||||| Sbjct: 30563920 ctcccgaagaaagccggtaaaattctcgtcgcgggaagcca 30563960 Score = 44.1 bits (22), Expect = 0.36 Identities = 34/38 (89%) Strand = Plus / Plus Query: 385 aagaaggccggtaagatcctcgtcgctggaagccacgc 422 |||||||||| |||||||||||||| || |||||||| Sbjct: 30544815 aagaaggccgacaagatcctcgtcgccggcagccacgc 30544852 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 358 gcctccactccattgttgcc 377 |||||||||||||||||||| Sbjct: 14811805 gcctccactccattgttgcc 14811824
>gb|AC091811.7| Oryza sativa chromosome 3 BAC OSJNBa0069E14 genomic sequence, complete sequence Length = 139872 Score = 190 bits (96), Expect = 3e-45 Identities = 147/164 (89%) Strand = Plus / Plus Query: 108 gatcatggttccttttgcctacacagaattcattgatgatctgacataccaagttaagaa 167 |||||||||||||| | |||||||||||||||||||||| |||||| | |||||||| || Sbjct: 95135 gatcatggttccttatacctacacagaattcattgatgacctgacagagcaagttaacaa 95194 Query: 168 caacatcatccccatgagcagaatcaacgatgctgtctacaggattctcagggtgaagtt 227 ||| || ||||||||||||||||| ||||||||||||||||||||||| | || ||||| Sbjct: 95195 caaaattatccccatgagcagaattgacgatgctgtctacaggattctccgagtcaagtt 95254 Query: 228 caccatgggtctatttgagagcccctatgctgacccaagcctcg 271 |||||||||||||||||||||||| | ||||||| | ||||||| Sbjct: 95255 caccatgggtctatttgagagcccttttgctgactctagcctcg 95298 Score = 67.9 bits (34), Expect = 3e-08 Identities = 88/106 (83%) Strand = Plus / Plus Query: 3 gggtttcgtgatttcagactggcaaggcattgatcggattactagccctccaggcgtgaa 62 |||||| |||||||| ||||||||||||||||| ||||| ||| ||||| ||| Sbjct: 94686 gggttttgtgatttctgactggcaaggcattgaccggatcacttctcctccgcataagaa 94745 Query: 63 ctattcttattcagttgaggctggagttggtgccggtattgacatg 108 ||||||||| ||| | ||||||||| |||||||||| ||||||||| Sbjct: 94746 ctattcttactcaatcgaggctggaattggtgccggcattgacatg 94791 Score = 58.0 bits (29), Expect = 2e-05 Identities = 83/101 (82%) Strand = Plus / Plus Query: 319 gtcaggaagtcattggtgttgctgaaaaatggaaaatctgcctccactccattgttgcct 378 ||||||||||| |||||| ||||||| || |||||||| ||| | |||| || | || Sbjct: 95433 gtcaggaagtccttggtgctgctgaagaacggaaaatcctcctactctccggtgcttccc 95492 Query: 379 ctcccaaagaaggccggtaagatcctcgtcgctggaagcca 419 ||||| ||||| |||||||| || |||||||| |||||||| Sbjct: 95493 ctcccgaagaaagccggtaaaattctcgtcgcgggaagcca 95533 Score = 44.1 bits (22), Expect = 0.36 Identities = 34/38 (89%) Strand = Plus / Plus Query: 385 aagaaggccggtaagatcctcgtcgctggaagccacgc 422 |||||||||| |||||||||||||| || |||||||| Sbjct: 76388 aagaaggccgacaagatcctcgtcgccggcagccacgc 76425
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 190 bits (96), Expect = 3e-45 Identities = 147/164 (89%) Strand = Plus / Plus Query: 108 gatcatggttccttttgcctacacagaattcattgatgatctgacataccaagttaagaa 167 |||||||||||||| | |||||||||||||||||||||| |||||| | |||||||| || Sbjct: 30654984 gatcatggttccttatacctacacagaattcattgatgacctgacagagcaagttaacaa 30655043 Query: 168 caacatcatccccatgagcagaatcaacgatgctgtctacaggattctcagggtgaagtt 227 ||| || ||||||||||||||||| ||||||||||||||||||||||| | || ||||| Sbjct: 30655044 caaaattatccccatgagcagaattgacgatgctgtctacaggattctccgagtcaagtt 30655103 Query: 228 caccatgggtctatttgagagcccctatgctgacccaagcctcg 271 |||||||||||||||||||||||| | ||||||| | ||||||| Sbjct: 30655104 caccatgggtctatttgagagcccttttgctgactctagcctcg 30655147 Score = 67.9 bits (34), Expect = 3e-08 Identities = 88/106 (83%) Strand = Plus / Plus Query: 3 gggtttcgtgatttcagactggcaaggcattgatcggattactagccctccaggcgtgaa 62 |||||| |||||||| ||||||||||||||||| ||||| ||| ||||| ||| Sbjct: 30654535 gggttttgtgatttctgactggcaaggcattgaccggatcacttctcctccgcataagaa 30654594 Query: 63 ctattcttattcagttgaggctggagttggtgccggtattgacatg 108 ||||||||| ||| | ||||||||| |||||||||| ||||||||| Sbjct: 30654595 ctattcttactcaatcgaggctggaattggtgccggcattgacatg 30654640 Score = 58.0 bits (29), Expect = 2e-05 Identities = 83/101 (82%) Strand = Plus / Plus Query: 319 gtcaggaagtcattggtgttgctgaaaaatggaaaatctgcctccactccattgttgcct 378 ||||||||||| |||||| ||||||| || |||||||| ||| | |||| || | || Sbjct: 30655282 gtcaggaagtccttggtgctgctgaagaacggaaaatcctcctactctccggtgcttccc 30655341 Query: 379 ctcccaaagaaggccggtaagatcctcgtcgctggaagcca 419 ||||| ||||| |||||||| || |||||||| |||||||| Sbjct: 30655342 ctcccgaagaaagccggtaaaattctcgtcgcgggaagcca 30655382 Score = 44.1 bits (22), Expect = 0.36 Identities = 34/38 (89%) Strand = Plus / Plus Query: 385 aagaaggccggtaagatcctcgtcgctggaagccacgc 422 |||||||||| |||||||||||||| || |||||||| Sbjct: 30636237 aagaaggccgacaagatcctcgtcgccggcagccacgc 30636274 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 358 gcctccactccattgttgcc 377 |||||||||||||||||||| Sbjct: 14806339 gcctccactccattgttgcc 14806358
>gb|AY103742.1| Zea mays PCO090119 mRNA sequence Length = 2612 Score = 176 bits (89), Expect = 4e-41 Identities = 338/421 (80%) Strand = Plus / Plus Query: 2 ggggtttcgtgatttcagactggcaaggcattgatcggattactagccctccaggcgtga 61 ||||||| |||||||| |||||| | |||||||||||||| |||| ||||| || | Sbjct: 1282 ggggttttgtgatttccgactgggagggcattgatcggatcactactcctcctcacgcca 1341 Query: 62 actattcttattcagttgaggctggagttggtgccggtattgacatgatcatggttcctt 121 |||| ||||| ||| |||||||||| |||||||| || |||||||||||||||||||| | Sbjct: 1342 actactcttactcaattgaggctggtgttggtgctggaattgacatgatcatggttccat 1401 Query: 122 ttgcctacacagaattcattgatgatctgacataccaagttaagaacaacatcatcccca 181 | |||||||||||||| || |||||||| |||||| ||||||| ||||||||| Sbjct: 1402 tcagatacacagaattcatcgacgatctgacgacacaagttcagaacaaggtcatcccca 1461 Query: 182 tgagcagaatcaacgatgctgtctacaggattctcagggtgaagttcaccatgggtctat 241 ||||||||||| |||| || ||||||||||| || | || ||||||||||||||||| | Sbjct: 1462 tgagcagaatcgacgacgccgtctacaggatccttcgtgtcaagttcaccatgggtctgt 1521 Query: 242 ttgagagcccctatgctgacccaagcctcgttggtgaactcgggaagcaggaacaccgcg 301 | |||| ||| || | ||| | ||||||| || || ||||||||||| |||||||| | Sbjct: 1522 tcgagaacccttaccccgactctagcctcgccggcgagctcgggaagcaagaacaccggg 1581 Query: 302 atcttgctcgtgaggccgtcaggaagtcattggtgttgctgaaaaatggaaaatctgcct 361 | || || || || ||||||||||| || | || | ||||| || || || || ||| Sbjct: 1582 aactggcgcgcgaagccgtcaggaaatcccttgttctcctgaagaacggcaagtcctcct 1641 Query: 362 ccactccattgttgcctctcccaaagaaggccggtaagatcctcgtcgctggaagccacg 421 | |||| ||| |||| ||||| ||||||||||| |||||||| ||||| || ||||||| Sbjct: 1642 acgctccgttgctgcccctcccgaagaaggccggcaagatcctggtcgccggcagccacg 1701 Query: 422 c 422 | Sbjct: 1702 c 1702
>ref|XM_464008.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1947 Score = 87.7 bits (44), Expect = 3e-14 Identities = 95/112 (84%) Strand = Plus / Plus Query: 209 ggattctcagggtgaagttcaccatgggtctatttgagagcccctatgctgacccaagcc 268 |||||||| ||||||||||||||||||| || || ||| ||||||| || |||| |||| Sbjct: 1166 ggattctccgggtgaagttcaccatgggcctcttcgagcgcccctacgccgacctcagcc 1225 Query: 269 tcgttggtgaactcgggaagcaggaacaccgcgatcttgctcgtgaggccgt 320 ||| || || |||||||||||||| |||||||| |||||||| || ||||| Sbjct: 1226 tcgccggcgagctcgggaagcaggagcaccgcgaccttgctcgcgatgccgt 1277
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 87.7 bits (44), Expect = 3e-14 Identities = 95/112 (84%) Strand = Plus / Minus Query: 209 ggattctcagggtgaagttcaccatgggtctatttgagagcccctatgctgacccaagcc 268 |||||||| ||||||||||||||||||| || || ||| ||||||| || |||| |||| Sbjct: 1645061 ggattctccgggtgaagttcaccatgggcctcttcgagcgcccctacgccgacctcagcc 1645002 Query: 269 tcgttggtgaactcgggaagcaggaacaccgcgatcttgctcgtgaggccgt 320 ||| || || |||||||||||||| |||||||| |||||||| || ||||| Sbjct: 1645001 tcgccggcgagctcgggaagcaggagcaccgcgaccttgctcgcgatgccgt 1644950 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 358 gcctccactccattgttgcc 377 |||||||||||||||||||| Sbjct: 31375842 gcctccactccattgttgcc 31375861 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 358 gcctccactccattgttgcc 377 |||||||||||||||||||| Sbjct: 30871656 gcctccactccattgttgcc 30871637 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 358 gcctccactccattgttgcc 377 |||||||||||||||||||| Sbjct: 30861665 gcctccactccattgttgcc 30861646
>dbj|AP004150.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1007_D04 Length = 125503 Score = 87.7 bits (44), Expect = 3e-14 Identities = 95/112 (84%) Strand = Plus / Minus Query: 209 ggattctcagggtgaagttcaccatgggtctatttgagagcccctatgctgacccaagcc 268 |||||||| ||||||||||||||||||| || || ||| ||||||| || |||| |||| Sbjct: 82164 ggattctccgggtgaagttcaccatgggcctcttcgagcgcccctacgccgacctcagcc 82105 Query: 269 tcgttggtgaactcgggaagcaggaacaccgcgatcttgctcgtgaggccgt 320 ||| || || |||||||||||||| |||||||| |||||||| || ||||| Sbjct: 82104 tcgccggcgagctcgggaagcaggagcaccgcgaccttgctcgcgatgccgt 82053
>gb|AF225411.1|AF225411 Zea mays exoglucanase precursor (exg1) gene, complete cds Length = 4193 Score = 75.8 bits (38), Expect = 1e-10 Identities = 92/110 (83%) Strand = Plus / Plus Query: 127 tacacagaattcattgatgatctgacataccaagttaagaacaacatcatccccatgagc 186 |||||||||||||| || || ||||| |||||| ||||||| |||||||||||||| Sbjct: 2583 tacacagaattcatcgacgacctgacgacacaagttcagaacaaggtcatccccatgagc 2642 Query: 187 agaatcaacgatgctgtctacaggattctcagggtgaagttcaccatggg 236 |||||| |||| || ||||||||||| || | || |||||||||||||| Sbjct: 2643 agaatcgacgacgccgtctacaggatccttcgtgtcaagttcaccatggg 2692 Score = 67.9 bits (34), Expect = 3e-08 Identities = 88/106 (83%) Strand = Plus / Plus Query: 3 gggtttcgtgatttcagactggcaaggcattgatcggattactagccctccaggcgtgaa 62 |||||| |||||||| |||||| | |||||||||||||| |||| ||||| || || Sbjct: 2155 gggttttgtgatttccgactgggagggcattgatcggatcactactcctcctcacgccaa 2214 Query: 63 ctattcttattcagttgaggctggagttggtgccggtattgacatg 108 ||| ||||| ||| |||||||||| |||||||| || ||||||||| Sbjct: 2215 ctactcttactcaattgaggctggtgttggtgctggaattgacatg 2260 Score = 52.0 bits (26), Expect = 0.001 Identities = 50/58 (86%) Strand = Plus / Plus Query: 365 ctccattgttgcctctcccaaagaaggccggtaagatcctcgtcgctggaagccacgc 422 |||| ||| |||| ||||| ||||||||||| |||||||| ||||| || |||||||| Sbjct: 2906 ctccgttgctgcccctcccgaagaaggccggcaagatcctggtcgccggcagccacgc 2963
>gb|AY335818.1| Gossypium hirsutum beta-D-glucosidase mRNA, complete cds Length = 2071 Score = 67.9 bits (34), Expect = 3e-08 Identities = 103/126 (81%) Strand = Plus / Plus Query: 61 aactattcttattcagttgaggctggagttggtgccggtattgacatgatcatggttcct 120 ||||| || ||||| || || |||||||| |||||||| ||||| ||| ||||||||||| Sbjct: 1065 aactactcatattctgtagaagctggagtcggtgccgggattgatatggtcatggttcct 1124 Query: 121 tttgcctacacagaattcattgatgatctgacataccaagttaagaacaacatcatcccc 180 | | || ||||||||| |||||||| || || || || ||||| ||||| ||||| || Sbjct: 1125 tataacttcacagaatttattgatgacctaacctatcaggttaaaaacaatatcattcca 1184 Query: 181 atgagc 186 |||||| Sbjct: 1185 atgagc 1190
>gb|AF102868.1| Hordeum vulgare subsp. vulgare beta-D-glucan exohydrolase isoenzyme ExoI mRNA, complete cds Length = 2161 Score = 61.9 bits (31), Expect = 2e-06 Identities = 76/91 (83%) Strand = Plus / Plus Query: 173 tcatccccatgagcagaatcaacgatgctgtctacaggattctcagggtgaagttcacca 232 |||||||||||||||| ||| ||||||| || | |||| || |||| |||||||||| Sbjct: 1101 tcatccccatgagcaggatcgacgatgccgtgacccggatcctgcgggtcaagttcacca 1160 Query: 233 tgggtctatttgagagcccctatgctgaccc 263 ||||||| || |||| |||||| |||||||| Sbjct: 1161 tgggtctcttcgagaacccctacgctgaccc 1191
>ref|XM_469757.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2192 Score = 50.1 bits (25), Expect = 0.006 Identities = 34/37 (91%) Strand = Plus / Plus Query: 80 aggctggagttggtgccggtattgacatgatcatggt 116 ||||||||||| |||||| ||||||||||||||||| Sbjct: 1136 aggctggagttcttgccggcattgacatgatcatggt 1172
>dbj|AK073110.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033023H22, full insert sequence Length = 2424 Score = 50.1 bits (25), Expect = 0.006 Identities = 34/37 (91%) Strand = Plus / Plus Query: 80 aggctggagttggtgccggtattgacatgatcatggt 116 ||||||||||| |||||| ||||||||||||||||| Sbjct: 1349 aggctggagttcttgccggcattgacatgatcatggt 1385
>ref|NM_122103.3| Arabidopsis thaliana hydrolase, hydrolyzing O-glycosyl compounds AT5G20940 mRNA, complete cds Length = 2078 Score = 46.1 bits (23), Expect = 0.092 Identities = 29/31 (93%) Strand = Plus / Plus Query: 173 tcatccccatgagcagaatcaacgatgctgt 203 ||||||| |||||||||||| |||||||||| Sbjct: 1133 tcatcccgatgagcagaatcgacgatgctgt 1163
>gb|AY092999.1| Arabidopsis thaliana beta-glucosidase-like protein (At5g20940) mRNA, complete cds Length = 2078 Score = 46.1 bits (23), Expect = 0.092 Identities = 29/31 (93%) Strand = Plus / Plus Query: 173 tcatccccatgagcagaatcaacgatgctgt 203 ||||||| |||||||||||| |||||||||| Sbjct: 1133 tcatcccgatgagcagaatcgacgatgctgt 1163
>emb|BX830026.1|CNS0A1C4 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB54ZB07 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1734 Score = 46.1 bits (23), Expect = 0.092 Identities = 29/31 (93%) Strand = Plus / Plus Query: 173 tcatccccatgagcagaatcaacgatgctgt 203 ||||||| |||||||||||| |||||||||| Sbjct: 1047 tcatcccgatgagcagaatcgacgatgctgt 1077
>gb|AF296834.1|F22D1 Arabidopsis thaliana BAC F22D1 Length = 96102 Score = 46.1 bits (23), Expect = 0.092 Identities = 29/31 (93%) Strand = Plus / Minus Query: 173 tcatccccatgagcagaatcaacgatgctgt 203 ||||||| |||||||||||| |||||||||| Sbjct: 48809 tcatcccgatgagcagaatcgacgatgctgt 48779
>ref|XM_469750.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1977 Score = 44.1 bits (22), Expect = 0.36 Identities = 34/38 (89%) Strand = Plus / Plus Query: 385 aagaaggccggtaagatcctcgtcgctggaagccacgc 422 |||||||||| |||||||||||||| || |||||||| Sbjct: 1369 aagaaggccgacaagatcctcgtcgccggcagccacgc 1406
>emb|AL050344.31|HSJ799D16 Human DNA sequence from clone RP4-799D16 on chromosome 1p34.3-36.1 Contains the 3' end of a novel gene, complete sequence Length = 127109 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 79 gaggctggagttggtgccggta 100 |||||||||||||||||||||| Sbjct: 39189 gaggctggagttggtgccggta 39168
>dbj|AK072485.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023133K21, full insert sequence Length = 2172 Score = 44.1 bits (22), Expect = 0.36 Identities = 34/38 (89%) Strand = Plus / Plus Query: 385 aagaaggccggtaagatcctcgtcgctggaagccacgc 422 |||||||||| |||||||||||||| || |||||||| Sbjct: 1382 aagaaggccgacaagatcctcgtcgccggcagccacgc 1419
>ref|NM_147836.2| Arabidopsis thaliana hydrolase, hydrolyzing O-glycosyl compounds AT5G04885 mRNA, complete cds Length = 2349 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 223 aagttcaccatgggtctatttgaga 247 ||||||||||||||||| ||||||| Sbjct: 1267 aagttcaccatgggtctttttgaga 1291
>gb|BC068777.1| Xenopus laevis hypothetical protein MGC81300, mRNA (cDNA clone MGC:81300 IMAGE:6632187), complete cds Length = 5308 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 130 acagaattcattgatgatctgacat 154 ||||||||||||||||||| ||||| Sbjct: 480 acagaattcattgatgatcagacat 504
>gb|BT013550.1| Lycopersicon esculentum clone 132277F, mRNA sequence Length = 2049 Score = 42.1 bits (21), Expect = 1.4 Identities = 42/49 (85%) Strand = Plus / Plus Query: 140 ttgatgatctgacataccaagttaagaacaacatcatccccatgagcag 188 ||||||||||| | | |||||| | |||||| ||||| ||||||||||| Sbjct: 1104 ttgatgatctggctttccaagtaaggaacaatatcattcccatgagcag 1152
>ref|NM_001017729.1| Danio rerio zgc:112148 (zgc:112148), mRNA Length = 849 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 206 acaggattctcagggtgaagt 226 ||||||||||||||||||||| Sbjct: 46 acaggattctcagggtgaagt 66
>gb|BC093225.1| Danio rerio zgc:112148, mRNA (cDNA clone MGC:112148 IMAGE:7429318), complete cds Length = 849 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 206 acaggattctcagggtgaagt 226 ||||||||||||||||||||| Sbjct: 46 acaggattctcagggtgaagt 66
>dbj|AK118082.1| Arabidopsis thaliana At5g04885 mRNA for unknown protein, complete cds, clone: RAFL19-33-I17 Length = 2344 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 223 aagttcaccatgggtctatttgaga 247 ||||||||||||||||| ||||||| Sbjct: 1266 aagttcaccatgggtctttttgaga 1290
>dbj|AB008271.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MUK11 Length = 79073 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 223 aagttcaccatgggtctatttgaga 247 ||||||||||||||||| ||||||| Sbjct: 72894 aagttcaccatgggtctttttgaga 72918
>ref|XM_483116.1| Oryza sativa (japonica cultivar-group), mRNA Length = 309 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 358 gcctccactccattgttgcc 377 |||||||||||||||||||| Sbjct: 75 gcctccactccattgttgcc 56
>ref|NM_145808.1| Homo sapiens myotrophin (MTPN), mRNA Length = 3770 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 107 tgatcatggttccttttgcc 126 |||||||||||||||||||| Sbjct: 784 tgatcatggttccttttgcc 765
>gb|AC105932.6| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBb0038H12 map E60284SA, complete sequence Length = 139190 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 358 gcctccactccattgttgcc 377 |||||||||||||||||||| Sbjct: 3832 gcctccactccattgttgcc 3851
>gb|AY393717.1| Cussonia paniculata tRNA-Leu (trnL) gene and trnL-trnF intergenic spacer, partial sequence; chloroplast Length = 902 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 ttggtgccggtattgacatg 108 |||||||||||||||||||| Sbjct: 460 ttggtgccggtattgacatg 441
>gb|AC133291.2| Oryza sativa (japonica cultivar-group) chromosome 11 PAC clone P0542B04, complete sequence Length = 182823 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 358 gcctccactccattgttgcc 377 |||||||||||||||||||| Sbjct: 117703 gcctccactccattgttgcc 117684
>gb|AC145802.2| Xenopus tropicalis clone CH216-80C17, complete sequence Length = 163910 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 238 ctatttgagagcccctatgctgac 261 |||||||| ||||||||||||||| Sbjct: 14867 ctatttgatagcccctatgctgac 14890
>gb|AC132260.3| Mus musculus BAC clone RP24-370C1 from chromosome 13, complete sequence Length = 160903 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 118 ccttttgcctacacagaatt 137 |||||||||||||||||||| Sbjct: 99602 ccttttgcctacacagaatt 99621
>gb|AC146544.2| Gasterosteus aculeatus clone CH213-80N20, complete sequence Length = 181589 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 228 caccatgggtctatttgaga 247 |||||||||||||||||||| Sbjct: 155378 caccatgggtctatttgaga 155359
>gb|AC146543.2| Gasterosteus aculeatus clone CH213-67L12, complete sequence Length = 197879 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 228 caccatgggtctatttgaga 247 |||||||||||||||||||| Sbjct: 133796 caccatgggtctatttgaga 133777
>gb|L12609.2|CTFCPRBCLA Clethra alnifolia ribulose 1,5-bisphosphate carboxylase large subunit (rbcL) gene, partial cds; chloroplast gene for chloroplast product Length = 1398 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 297 ccgcgatcttgctcgtgagg 316 |||||||||||||||||||| Sbjct: 1272 ccgcgatcttgctcgtgagg 1291
>gb|AC157349.7| Medicago truncatula clone mth2-139l1, complete sequence Length = 116909 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 82 gctggagttggtgccggtat 101 |||||||||||||||||||| Sbjct: 83850 gctggagttggtgccggtat 83831
>gb|BC013989.1| Homo sapiens cDNA clone IMAGE:3641578, **** WARNING: chimeric clone **** Length = 4793 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 107 tgatcatggttccttttgcc 126 |||||||||||||||||||| Sbjct: 912 tgatcatggttccttttgcc 893
>emb|AL441943.6| Human DNA sequence from clone RP11-69C17 on chromosome 10 Contains four novel genes (FLJ40155) (FLJ31539), complete sequence Length = 203234 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 277 gaactcgggaagcaggaaca 296 |||||||||||||||||||| Sbjct: 97541 gaactcgggaagcaggaaca 97560
>emb|AL034451.26|HS191E19 Human DNA sequence from clone RP1-191E19 on chromosome 6q23.2-24.2, complete sequence Length = 110885 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 120 ttttgcctacacagaattca 139 |||||||||||||||||||| Sbjct: 107456 ttttgcctacacagaattca 107475
>gb|DQ020143.1| Gallus gallus adseverin-like mRNA, complete sequence Length = 3117 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 81 ggctggagttggtgccggta 100 |||||||||||||||||||| Sbjct: 102 ggctggagttggtgccggta 121
>emb|AL606610.3|OSJN00045 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0012E08, complete sequence Length = 106975 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 358 gcctccactccattgttgcc 377 |||||||||||||||||||| Sbjct: 38273 gcctccactccattgttgcc 38292
>emb|AJ245900.1|OSA245900 Oryza sativa chromosome 4 BAC q3037-207F1 complete genome Length = 124321 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 358 gcctccactccattgttgcc 377 |||||||||||||||||||| Sbjct: 64600 gcctccactccattgttgcc 64619
>emb|AJ006501.1|TMA6501 Tropaeolum majus mRNA for beta-D-glucosidase Length = 2113 Score = 40.1 bits (20), Expect = 5.7 Identities = 38/44 (86%) Strand = Plus / Plus Query: 2 ggggtttcgtgatttcagactggcaaggcattgatcggattact 45 ||||||| || || ||||| ||| ||||||||||| |||||||| Sbjct: 1001 ggggttttgtcatatcagattgggaaggcattgataggattact 1044
>gb|AC097278.6| Oryza sativa chromosome 10 BAC OSJNBa0040E17 genomic sequence, complete sequence Length = 151673 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 358 gcctccactccattgttgcc 377 |||||||||||||||||||| Sbjct: 146262 gcctccactccattgttgcc 146281
>emb|AL834231.1|HSM805255 Homo sapiens mRNA; cDNA DKFZp761E1322 (from clone DKFZp761E1322) Length = 3770 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 107 tgatcatggttccttttgcc 126 |||||||||||||||||||| Sbjct: 784 tgatcatggttccttttgcc 765
>dbj|AK056225.1| Homo sapiens cDNA FLJ31663 fis, clone NT2RI2004504, highly similar to MYOTROPHIN Length = 2156 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 107 tgatcatggttccttttgcc 126 |||||||||||||||||||| Sbjct: 815 tgatcatggttccttttgcc 796
>gb|AC084762.8| Oryza sativa chromosome 3 BAC OSJNBa0013O08 genomic sequence, complete sequence Length = 148021 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 358 gcctccactccattgttgcc 377 |||||||||||||||||||| Sbjct: 120963 gcctccactccattgttgcc 120944
>gb|AC148816.3| Medicago truncatula chromosome 7 BAC clone mth2-16i24, complete sequence Length = 123655 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 126 ctacacagaattcattgatgatct 149 |||||| ||||||||||||||||| Sbjct: 78082 ctacaccgaattcattgatgatct 78059
>ref|XM_396647.2| PREDICTED: Apis mellifera similar to G protein-coupled receptor kinase type 2 (LOC413197), mRNA Length = 3202 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 383 caaagaaggccggtaagatc 402 |||||||||||||||||||| Sbjct: 2438 caaagaaggccggtaagatc 2457
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 358 gcctccactccattgttgcc 377 |||||||||||||||||||| Sbjct: 19883465 gcctccactccattgttgcc 19883484
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 358 gcctccactccattgttgcc 377 |||||||||||||||||||| Sbjct: 23805404 gcctccactccattgttgcc 23805385
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 358 gcctccactccattgttgcc 377 |||||||||||||||||||| Sbjct: 20273111 gcctccactccattgttgcc 20273092 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 358 gcctccactccattgttgcc 377 |||||||||||||||||||| Sbjct: 588609 gcctccactccattgttgcc 588590
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 358 gcctccactccattgttgcc 377 |||||||||||||||||||| Sbjct: 5920051 gcctccactccattgttgcc 5920032
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 358 gcctccactccattgttgcc 377 |||||||||||||||||||| Sbjct: 14079650 gcctccactccattgttgcc 14079669
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 358 gcctccactccattgttgcc 377 |||||||||||||||||||| Sbjct: 24352700 gcctccactccattgttgcc 24352719 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 358 gcctccactccattgttgcc 377 |||||||||||||||||||| Sbjct: 23091626 gcctccactccattgttgcc 23091645
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 358 gcctccactccattgttgcc 377 |||||||||||||||||||| Sbjct: 398942 gcctccactccattgttgcc 398961
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 358 gcctccactccattgttgcc 377 |||||||||||||||||||| Sbjct: 30190976 gcctccactccattgttgcc 30190957 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 358 gcctccactccattgttgcc 377 |||||||||||||||||||| Sbjct: 30117914 gcctccactccattgttgcc 30117895 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 358 gcctccactccattgttgcc 377 |||||||||||||||||||| Sbjct: 8279508 gcctccactccattgttgcc 8279527
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 358 gcctccactccattgttgcc 377 |||||||||||||||||||| Sbjct: 2731599 gcctccactccattgttgcc 2731618
>gb|AF528383.1| Hypochaeris sessiliflora isolate 1 chloroplast tRNA-Leu (trnL) gene and trnL-trnF intergenic spacer region, partial sequence Length = 845 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 ttggtgccggtattgacatg 108 |||||||||||||||||||| Sbjct: 417 ttggtgccggtattgacatg 398
>gb|AF231856.1|AF231856 Nestegis lanceolata tRNA-Leu (trnL) gene, partial intron and 3' exon, and trnL-trnF spacer region; chloroplast gene for chloroplast product Length = 858 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 ttggtgccggtattgacatg 108 |||||||||||||||||||| Sbjct: 432 ttggtgccggtattgacatg 413
>gb|AC015987.6| Homo sapiens chromosome 7 clone RP11-207O19, complete sequence Length = 181882 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 107 tgatcatggttccttttgcc 126 |||||||||||||||||||| Sbjct: 123683 tgatcatggttccttttgcc 123702
>gb|AC024083.3|AC024083 Homo sapiens chromosome 7 clone RP11-24I23, complete sequence Length = 152283 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 107 tgatcatggttccttttgcc 126 |||||||||||||||||||| Sbjct: 25364 tgatcatggttccttttgcc 25383
>gb|AF212027.1|AF212027 Deprea glabra trnL gene, partial sequence; chloroplast gene for chloroplast product Length = 516 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 ttggtgccggtattgacatg 108 |||||||||||||||||||| Sbjct: 486 ttggtgccggtattgacatg 467
>dbj|AP004693.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0461F06 Length = 147891 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 358 gcctccactccattgttgcc 377 |||||||||||||||||||| Sbjct: 14725 gcctccactccattgttgcc 14744
>dbj|AP005733.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0024K03 Length = 119796 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 358 gcctccactccattgttgcc 377 |||||||||||||||||||| Sbjct: 58416 gcctccactccattgttgcc 58435
>dbj|AP007231.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0535F09 Length = 175050 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 358 gcctccactccattgttgcc 377 |||||||||||||||||||| Sbjct: 57311 gcctccactccattgttgcc 57292
>dbj|AP006065.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0076I16 Length = 151711 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 358 gcctccactccattgttgcc 377 |||||||||||||||||||| Sbjct: 109896 gcctccactccattgttgcc 109877
>dbj|AP002522.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0009G03 Length = 163526 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 358 gcctccactccattgttgcc 377 |||||||||||||||||||| Sbjct: 37276 gcctccactccattgttgcc 37295
>dbj|AP005527.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0603C10 Length = 187620 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 358 gcctccactccattgttgcc 377 |||||||||||||||||||| Sbjct: 73013 gcctccactccattgttgcc 73032
>dbj|AP005732.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBb0014M19 Length = 129270 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 358 gcctccactccattgttgcc 377 |||||||||||||||||||| Sbjct: 58585 gcctccactccattgttgcc 58604
>dbj|AP004342.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0585H11 Length = 149371 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 358 gcctccactccattgttgcc 377 |||||||||||||||||||| Sbjct: 1106 gcctccactccattgttgcc 1125
>dbj|AP006186.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:B1317D11 Length = 135043 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 358 gcctccactccattgttgcc 377 |||||||||||||||||||| Sbjct: 123180 gcctccactccattgttgcc 123199
>dbj|AP005848.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0078N11 Length = 155168 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 358 gcctccactccattgttgcc 377 |||||||||||||||||||| Sbjct: 11239 gcctccactccattgttgcc 11258
>dbj|AP005112.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0684F11 Length = 147731 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 358 gcctccactccattgttgcc 377 |||||||||||||||||||| Sbjct: 55233 gcctccactccattgttgcc 55214 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 358 gcctccactccattgttgcc 377 |||||||||||||||||||| Sbjct: 45242 gcctccactccattgttgcc 45223
>dbj|AP004762.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0686H11 Length = 135273 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 358 gcctccactccattgttgcc 377 |||||||||||||||||||| Sbjct: 93004 gcctccactccattgttgcc 93023
>dbj|AP004585.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0470B03 Length = 163371 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 358 gcctccactccattgttgcc 377 |||||||||||||||||||| Sbjct: 151354 gcctccactccattgttgcc 151373
>emb|AL732334.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0323C08, complete sequence Length = 94903 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 358 gcctccactccattgttgcc 377 |||||||||||||||||||| Sbjct: 60791 gcctccactccattgttgcc 60810
>emb|BX927078.22| Zebrafish DNA sequence from clone CH211-284J7 in linkage group 3, complete sequence Length = 149711 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 241 tttgagagcccctatgctga 260 |||||||||||||||||||| Sbjct: 124417 tttgagagcccctatgctga 124398
>emb|CR962124.2| Medicago truncatula chromosome 5 clone mth2-44c15, COMPLETE SEQUENCE Length = 136068 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 82 gctggagttggtgccggtat 101 |||||||||||||||||||| Sbjct: 125652 gctggagttggtgccggtat 125633
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 358 gcctccactccattgttgcc 377 |||||||||||||||||||| Sbjct: 5921237 gcctccactccattgttgcc 5921218
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 358 gcctccactccattgttgcc 377 |||||||||||||||||||| Sbjct: 20583430 gcctccactccattgttgcc 20583411 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 358 gcctccactccattgttgcc 377 |||||||||||||||||||| Sbjct: 588609 gcctccactccattgttgcc 588590
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 358 gcctccactccattgttgcc 377 |||||||||||||||||||| Sbjct: 23733603 gcctccactccattgttgcc 23733584
>emb|BX000512.1|CNS08CE2 Oryza sativa chromosome 11, . BAC OSJNBa0025K19 of library OSJNBa from chromosome 11 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 181322 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 358 gcctccactccattgttgcc 377 |||||||||||||||||||| Sbjct: 154363 gcctccactccattgttgcc 154382 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,606,542 Number of Sequences: 3902068 Number of extensions: 3606542 Number of successful extensions: 72686 Number of sequences better than 10.0: 99 Number of HSP's better than 10.0 without gapping: 105 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 72160 Number of HSP's gapped (non-prelim): 520 length of query: 422 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 400 effective length of database: 17,147,199,772 effective search space: 6858879908800 effective search space used: 6858879908800 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)