ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast78f01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY736119.1| Triticum aestivum 20S proteasome beta 5 subunit m... 396 e-107
2dbj|AK104520.1| Oryza sativa (japonica cultivar-group) cDNA clon... 222 7e-55
3dbj|AK104361.1| Oryza sativa (japonica cultivar-group) cDNA clon... 222 7e-55
4dbj|AK071652.1| Oryza sativa (japonica cultivar-group) cDNA clon... 222 7e-55
5dbj|AB026567.1| Oryza sativa (japonica cultivar-group) OsPBE1 mR... 222 7e-55
6gb|BT016601.1| Zea mays clone Contig434 mRNA sequence 176 4e-41
7gb|AY103704.1| Zea mays PCO130904 mRNA sequence 176 4e-41
8dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 170 2e-39
9dbj|AP006533.3| Oryza sativa (japonica cultivar-group) genomic D... 170 2e-39
10gb|AY683448.1| Lemna minor 26S proteasome beta subunit mRNA, par... 44 0.35
11dbj|AP003708.2| Oryza sativa (japonica cultivar-group) genomic D... 44 0.35
12dbj|AK104152.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.35
13gb|AC160552.13| Mus musculus chromosome 3, clone RP23-326D6, com... 42 1.4
14gb|AC120144.11| Mus musculus chromosome 8, clone RP24-427K8, com... 42 1.4
15gb|AC163442.16| Mus musculus chromosome 8, clone RP23-441L19, co... 42 1.4
16gb|DQ214027.1| Taeniopygia guttata clone 0058P0034B02 ankyrin-li... 40 5.5
17gb|DQ214026.1| Taeniopygia guttata clone 0058P0001C03 ankyrin-li... 40 5.5
18gb|DQ214025.1| Taeniopygia guttata clone 0058P0045H05 ankyrin-li... 40 5.5
19gb|DQ214024.1| Taeniopygia guttata clone 0058P0016G03 ankyrin-li... 40 5.5
20gb|DQ214023.1| Taeniopygia guttata clone 0058P0052B06 ankyrin-li... 40 5.5
21gb|CP000058.1| Pseudomonas syringae pv. phaseolicola 1448A, comp... 40 5.5
22ref|XM_859995.1| PREDICTED: Canis familiaris similar to regulato... 40 5.5
23ref|XM_859974.1| PREDICTED: Canis familiaris similar to regulato... 40 5.5
24ref|XM_859956.1| PREDICTED: Canis familiaris similar to regulato... 40 5.5
25ref|XM_533866.2| PREDICTED: Canis familiaris similar to regulato... 40 5.5
26emb|BX063853.1|CNS09LFL Single read from an extremity of a full-... 40 5.5
27emb|BX060118.1|CNS09IJU Single read from an extremity of a full-... 40 5.5
28emb|BX054899.1|CNS09EIV Single read from an extremity of a full-... 40 5.5
29emb|BX046530.1|CNS0982E Single read from an extremity of a full-... 40 5.5
30emb|AL606647.3|OSJN00096 Oryza sativa genomic DNA, chromosome 4,... 40 5.5
31dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.5
32ref|XM_311198.2| Anopheles gambiae str. PEST ENSANGP00000019083 ... 40 5.5 
>gb|AY736119.1| Triticum aestivum 20S proteasome beta 5 subunit mRNA, complete cds
          Length = 860

 Score =  396 bits (200), Expect = e-107
 Identities = 216/220 (98%), Gaps = 1/220 (0%)
 Strand = Plus / Plus

                                                                       
Query: 191 agctcgccctcgagttccccacctgcgacgacttcgacgggttccagaaggcgaccaagg 250
           |||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||
Sbjct: 107 agctcgccctcgagttccccacctgcaacgacttcgatgggttccagaaggcgaccaagg 166

                                                                       
Query: 251 cgatggtgaacaacaagaaggggaccaccacgctctccttcatcttcgacaagggcgtca 310
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 167 agatggtgaacaacaagaaggggaccaccacgctctccttcatcttcgacaagggcgtca 226

                                                                       
Query: 311 tcgtcgccgccgactcccgggccagcatgggcggctacatatcttcgcaaactgtga-ga 369
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 227 tcgtcgccgccgactcccgggccagcatgggcggctacatatcttcgcaaactgtgagga 286

                                                   
Query: 370 aaatcatcgagattaatccctacatgctgggaaccatggc 409
           ||||||||||||||||||||||||||||||||||||||||
Sbjct: 287 aaatcatcgagattaatccctacatgctgggaaccatggc 326



 Score = 79.8 bits (40), Expect = 6e-12
 Identities = 43/44 (97%)
 Strand = Plus / Plus

                                                       
Query: 85  gacgacgcgatgatccccaacctctccgccctcgagaaccactt 128
           |||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 1   gacgacgcgatgattcccaacctctccgccctcgagaaccactt 44
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>dbj|AK104520.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-303-E06, full
           insert sequence
          Length = 1099

 Score =  222 bits (112), Expect = 7e-55
 Identities = 173/192 (90%), Gaps = 1/192 (0%)
 Strand = Plus / Plus

                                                                       
Query: 219 cgacttcgacgggttccagaaggcgaccaaggcgatggtgaacaacaagaaggggaccac 278
           ||||||||||||||||||||||| |||||||| |||| ||||  |||||||||| || ||
Sbjct: 182 cgacttcgacgggttccagaaggagaccaaggagatgctgaagcacaagaagggaacgac 241

                                                                       
Query: 279 cacgctctccttcatcttcgacaagggcgtcatcgtcgccgccgactcccgggccagcat 338
           ||||||| | ||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 242 cacgctcgcgttcatcttcgacaagggcgtcatcgtcgccgccgactcccgcgccagcat 301

                                                                       
Query: 339 gggcggctacatatcttcgcaaactgtga-gaaaatcatcgagattaatccctacatgct 397
           |||||| |||||||||||||||||||||| |||||| || || || ||||| ||||||||
Sbjct: 302 gggcggatacatatcttcgcaaactgtgaggaaaattattgaaataaatccgtacatgct 361

                       
Query: 398 gggaaccatggc 409
            ||||| |||||
Sbjct: 362 tggaacaatggc 373
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>dbj|AK104361.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-C04, full
           insert sequence
          Length = 1099

 Score =  222 bits (112), Expect = 7e-55
 Identities = 173/192 (90%), Gaps = 1/192 (0%)
 Strand = Plus / Plus

                                                                       
Query: 219 cgacttcgacgggttccagaaggcgaccaaggcgatggtgaacaacaagaaggggaccac 278
           ||||||||||||||||||||||| |||||||| |||| ||||  |||||||||| || ||
Sbjct: 182 cgacttcgacgggttccagaaggagaccaaggagatgctgaagcacaagaagggaacgac 241

                                                                       
Query: 279 cacgctctccttcatcttcgacaagggcgtcatcgtcgccgccgactcccgggccagcat 338
           ||||||| | ||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 242 cacgctcgcgttcatcttcgacaagggcgtcatcgtcgccgccgactcccgcgccagcat 301

                                                                       
Query: 339 gggcggctacatatcttcgcaaactgtga-gaaaatcatcgagattaatccctacatgct 397
           |||||| |||||||||||||||||||||| |||||| || || || ||||| ||||||||
Sbjct: 302 gggcggatacatatcttcgcaaactgtgaggaaaattattgaaataaatccgtacatgct 361

                       
Query: 398 gggaaccatggc 409
            ||||| |||||
Sbjct: 362 tggaacaatggc 373
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>dbj|AK071652.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023099E18, full
           insert sequence
          Length = 1217

 Score =  222 bits (112), Expect = 7e-55
 Identities = 173/192 (90%), Gaps = 1/192 (0%)
 Strand = Plus / Plus

                                                                       
Query: 219 cgacttcgacgggttccagaaggcgaccaaggcgatggtgaacaacaagaaggggaccac 278
           ||||||||||||||||||||||| |||||||| |||| ||||  |||||||||| || ||
Sbjct: 187 cgacttcgacgggttccagaaggagaccaaggagatgctgaagcacaagaagggaacgac 246

                                                                       
Query: 279 cacgctctccttcatcttcgacaagggcgtcatcgtcgccgccgactcccgggccagcat 338
           ||||||| | ||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 247 cacgctcgcgttcatcttcgacaagggcgtcatcgtcgccgccgactcccgcgccagcat 306

                                                                       
Query: 339 gggcggctacatatcttcgcaaactgtga-gaaaatcatcgagattaatccctacatgct 397
           |||||| |||||||||||||||||||||| |||||| || || || ||||| ||||||||
Sbjct: 307 gggcggatacatatcttcgcaaactgtgaggaaaattattgaaataaatccgtacatgct 366

                       
Query: 398 gggaaccatggc 409
            ||||| |||||
Sbjct: 367 tggaacaatggc 378
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>dbj|AB026567.1| Oryza sativa (japonica cultivar-group) OsPBE1 mRNA for beta 5
           subunit of 20S proteasome, complete cds
          Length = 1233

 Score =  222 bits (112), Expect = 7e-55
 Identities = 173/192 (90%), Gaps = 1/192 (0%)
 Strand = Plus / Plus

                                                                       
Query: 219 cgacttcgacgggttccagaaggcgaccaaggcgatggtgaacaacaagaaggggaccac 278
           ||||||||||||||||||||||| |||||||| |||| ||||  |||||||||| || ||
Sbjct: 181 cgacttcgacgggttccagaaggagaccaaggagatgctgaagcacaagaagggaacgac 240

                                                                       
Query: 279 cacgctctccttcatcttcgacaagggcgtcatcgtcgccgccgactcccgggccagcat 338
           ||||||| | ||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 241 cacgctcgcgttcatcttcgacaagggcgtcatcgtcgccgccgactcccgcgccagcat 300

                                                                       
Query: 339 gggcggctacatatcttcgcaaactgtga-gaaaatcatcgagattaatccctacatgct 397
           |||||| |||||||||||||||||||||| |||||| || || || ||||| ||||||||
Sbjct: 301 gggcggatacatatcttcgcaaactgtgaggaaaattattgaaataaatccgtacatgct 360

                       
Query: 398 gggaaccatggc 409
            ||||| |||||
Sbjct: 361 tggaacaatggc 372
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>gb|BT016601.1| Zea mays clone Contig434 mRNA sequence
          Length = 1072

 Score =  176 bits (89), Expect = 4e-41
 Identities = 177/205 (86%), Gaps = 1/205 (0%)
 Strand = Plus / Plus

                                                                       
Query: 206 tccccacctgcgacgacttcgacgggttccagaaggcgaccaaggcgatggtgaacaaca 265
           |||||| |||||||||||||||||| ||||||  ||| |||||||  |||||||| || |
Sbjct: 180 tccccatctgcgacgacttcgacggcttccaggcggccaccaaggatatggtgaagaata 239

                                                                       
Query: 266 agaaggggaccaccacgctctccttcatcttcgacaagggcgtcatcgtcgccgccgact 325
           |||||||||| ||||||||  |||||||||||||||||||||||||||||||||| || |
Sbjct: 240 agaaggggacgaccacgcttgccttcatcttcgacaagggcgtcatcgtcgccgctgatt 299

                                                                       
Query: 326 cccgggccagcatgggcggctacatatcttcgcaaactgtga-gaaaatcatcgagatta 384
           || |||||||||||||||| || ||||| || ||||| |||| |||||| || || || |
Sbjct: 300 ccagggccagcatgggcggttatatatcctcacaaaccgtgaggaaaattattgaaataa 359

                                    
Query: 385 atccctacatgctgggaaccatggc 409
           |||| ||||||||||| || |||||
Sbjct: 360 atccttacatgctggggacaatggc 384
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>gb|AY103704.1| Zea mays PCO130904 mRNA sequence
          Length = 1115

 Score =  176 bits (89), Expect = 4e-41
 Identities = 177/205 (86%), Gaps = 1/205 (0%)
 Strand = Plus / Plus

                                                                       
Query: 206 tccccacctgcgacgacttcgacgggttccagaaggcgaccaaggcgatggtgaacaaca 265
           |||||| |||||||||||||||||| ||||||  ||| |||||||  |||||||| || |
Sbjct: 205 tccccatctgcgacgacttcgacggcttccaggcggccaccaaggatatggtgaagaata 264

                                                                       
Query: 266 agaaggggaccaccacgctctccttcatcttcgacaagggcgtcatcgtcgccgccgact 325
           |||||||||| ||||||||  |||||||||||||||||||||||||||||||||| || |
Sbjct: 265 agaaggggacgaccacgcttgccttcatcttcgacaagggcgtcatcgtcgccgctgatt 324

                                                                       
Query: 326 cccgggccagcatgggcggctacatatcttcgcaaactgtga-gaaaatcatcgagatta 384
           || |||||||||||||||| || ||||| || ||||| |||| |||||| || || || |
Sbjct: 325 ccagggccagcatgggcggttatatatcctcacaaaccgtgaggaaaattattgaaataa 384

                                    
Query: 385 atccctacatgctgggaaccatggc 409
           |||| ||||||||||| || |||||
Sbjct: 385 atccttacatgctggggacaatggc 409
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score =  170 bits (86), Expect = 2e-39
 Identities = 119/130 (91%)
 Strand = Plus / Minus

                                                                           
Query: 223     ttcgacgggttccagaaggcgaccaaggcgatggtgaacaacaagaaggggaccaccacg 282
               ||||||||||||||||||| |||||||| |||| ||||  |||||||||| || ||||||
Sbjct: 2772703 ttcgacgggttccagaaggagaccaaggagatgctgaagcacaagaagggaacgaccacg 2772644

                                                                           
Query: 283     ctctccttcatcttcgacaagggcgtcatcgtcgccgccgactcccgggccagcatgggc 342
               ||| | ||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 2772643 ctcgcgttcatcttcgacaagggcgtcatcgtcgccgccgactcccgcgccagcatgggc 2772584

                         
Query: 343     ggctacatat 352
               || |||||||
Sbjct: 2772583 ggatacatat 2772574



 Score = 44.1 bits (22), Expect = 0.35
 Identities = 50/58 (86%), Gaps = 1/58 (1%)
 Strand = Plus / Minus

                                                                         
Query: 353     cttcgcaaactgtga-gaaaatcatcgagattaatccctacatgctgggaaccatggc 409
               ||||||||||||||| |||||| || || || ||||| |||||||| ||||| |||||
Sbjct: 2771656 cttcgcaaactgtgaggaaaattattgaaataaatccgtacatgcttggaacaatggc 2771599



 Score = 44.1 bits (22), Expect = 0.35
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                                 
Query: 304     ggcgtcatcgtcgccgccgactcccgggccagca 337
               |||||| || ||||||||||||||||| ||||||
Sbjct: 2093420 ggcgtcgtcctcgccgccgactcccggaccagca 2093387
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>dbj|AP006533.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0085L11
          Length = 148142

 Score =  170 bits (86), Expect = 2e-39
 Identities = 119/130 (91%)
 Strand = Plus / Minus

                                                                         
Query: 223   ttcgacgggttccagaaggcgaccaaggcgatggtgaacaacaagaaggggaccaccacg 282
             ||||||||||||||||||| |||||||| |||| ||||  |||||||||| || ||||||
Sbjct: 16184 ttcgacgggttccagaaggagaccaaggagatgctgaagcacaagaagggaacgaccacg 16125

                                                                         
Query: 283   ctctccttcatcttcgacaagggcgtcatcgtcgccgccgactcccgggccagcatgggc 342
             ||| | ||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 16124 ctcgcgttcatcttcgacaagggcgtcatcgtcgccgccgactcccgcgccagcatgggc 16065

                       
Query: 343   ggctacatat 352
             || |||||||
Sbjct: 16064 ggatacatat 16055



 Score = 44.1 bits (22), Expect = 0.35
 Identities = 50/58 (86%), Gaps = 1/58 (1%)
 Strand = Plus / Minus

                                                                       
Query: 353   cttcgcaaactgtga-gaaaatcatcgagattaatccctacatgctgggaaccatggc 409
             ||||||||||||||| |||||| || || || ||||| |||||||| ||||| |||||
Sbjct: 15137 cttcgcaaactgtgaggaaaattattgaaataaatccgtacatgcttggaacaatggc 15080
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>gb|AY683448.1| Lemna minor 26S proteasome beta subunit mRNA, partial cds
          Length = 349

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 68/82 (82%), Gaps = 1/82 (1%)
 Strand = Plus / Plus

                                                                       
Query: 317 ccgccgactcccgggccagcatgggcggctacatatcttcgcaaactgtga-gaaaatca 375
           ||||||| |||||||| |||||||| || || || ||||| ||  | |||| ||||||||
Sbjct: 63  ccgccgattcccgggctagcatgggaggatatatctcttctcagtcggtgaagaaaatca 122

                                 
Query: 376 tcgagattaatccctacatgct 397
           | ||||| || |||||||||||
Sbjct: 123 tagagatcaacccctacatgct 144
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>dbj|AP003708.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
              clone:OSJNBa0041F13
          Length = 163230

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                                
Query: 304    ggcgtcatcgtcgccgccgactcccgggccagca 337
              |||||| || ||||||||||||||||| ||||||
Sbjct: 114282 ggcgtcgtcctcgccgccgactcccggaccagca 114249
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>dbj|AK104152.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-209-C07, full
           insert sequence
          Length = 999

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                             
Query: 304 ggcgtcatcgtcgccgccgactcccgggccagca 337
           |||||| || ||||||||||||||||| ||||||
Sbjct: 218 ggcgtcgtcctcgccgccgactcccggaccagca 251
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>gb|AC160552.13| Mus musculus chromosome 3, clone RP23-326D6, complete sequence
          Length = 210051

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 282    gctctccttcatcttcgacaagggc 306
              |||||||||||||||| ||||||||
Sbjct: 171205 gctctccttcatcttctacaagggc 171181
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>gb|AC120144.11| Mus musculus chromosome 8, clone RP24-427K8, complete sequence
          Length = 210003

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 268   aaggggaccaccacgctctcc 288
             |||||||||||||||||||||
Sbjct: 13188 aaggggaccaccacgctctcc 13168
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>gb|AC163442.16| Mus musculus chromosome 8, clone RP23-441L19, complete sequence
          Length = 214994

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 268    aaggggaccaccacgctctcc 288
              |||||||||||||||||||||
Sbjct: 193548 aaggggaccaccacgctctcc 193528
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>gb|DQ214027.1| Taeniopygia guttata clone 0058P0034B02 ankyrin-like protein variant
           2-like mRNA, complete sequence
          Length = 1038

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 330 ggccagcatgggcggctaca 349
           ||||||||||||||||||||
Sbjct: 578 ggccagcatgggcggctaca 597
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>gb|DQ214026.1| Taeniopygia guttata clone 0058P0001C03 ankyrin-like protein variant
           2-like mRNA, complete sequence
          Length = 1038

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 330 ggccagcatgggcggctaca 349
           ||||||||||||||||||||
Sbjct: 578 ggccagcatgggcggctaca 597
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>gb|DQ214025.1| Taeniopygia guttata clone 0058P0045H05 ankyrin-like protein variant
           1-like mRNA, complete sequence
          Length = 1085

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 330 ggccagcatgggcggctaca 349
           ||||||||||||||||||||
Sbjct: 614 ggccagcatgggcggctaca 633
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>gb|DQ214024.1| Taeniopygia guttata clone 0058P0016G03 ankyrin-like protein variant
           1-like mRNA, complete sequence
          Length = 1085

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 330 ggccagcatgggcggctaca 349
           ||||||||||||||||||||
Sbjct: 614 ggccagcatgggcggctaca 633
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>gb|DQ214023.1| Taeniopygia guttata clone 0058P0052B06 ankyrin-like protein variant
           1-like mRNA, complete sequence
          Length = 1085

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 330 ggccagcatgggcggctaca 349
           ||||||||||||||||||||
Sbjct: 614 ggccagcatgggcggctaca 633
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>gb|CP000058.1| Pseudomonas syringae pv. phaseolicola 1448A, complete genome
          Length = 5928787

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 304     ggcgtcatcgtcgccgccga 323
               ||||||||||||||||||||
Sbjct: 2726293 ggcgtcatcgtcgccgccga 2726312
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>ref|XM_859995.1| PREDICTED: Canis familiaris similar to regulatory factor
           X-associated ankyrin-containing protein isoform b,
           transcript variant 6 (LOC476662), mRNA
          Length = 1020

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 330 ggccagcatgggcggctaca 349
           ||||||||||||||||||||
Sbjct: 570 ggccagcatgggcggctaca 589
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>ref|XM_859974.1| PREDICTED: Canis familiaris similar to regulatory factor
           X-associated ankyrin-containing protein isoform b,
           transcript variant 5 (LOC476662), mRNA
          Length = 975

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 330 ggccagcatgggcggctaca 349
           ||||||||||||||||||||
Sbjct: 525 ggccagcatgggcggctaca 544
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>ref|XM_859956.1| PREDICTED: Canis familiaris similar to regulatory factor
           X-associated ankyrin-containing protein isoform b,
           transcript variant 4 (LOC476662), mRNA
          Length = 870

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 330 ggccagcatgggcggctaca 349
           ||||||||||||||||||||
Sbjct: 420 ggccagcatgggcggctaca 439
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>ref|XM_533866.2| PREDICTED: Canis familiaris similar to regulatory factor
           X-associated ankyrin-containing protein isoform b,
           transcript variant 1 (LOC476662), mRNA
          Length = 939

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 330 ggccagcatgggcggctaca 349
           ||||||||||||||||||||
Sbjct: 489 ggccagcatgggcggctaca 508
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>emb|BX063853.1|CNS09LFL Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 5-PRIME end of
           clone FK0AAC45DF07 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 1001

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 233 tccagaaggcgaccaaggcg 252
           ||||||||||||||||||||
Sbjct: 285 tccagaaggcgaccaaggcg 304
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>emb|BX060118.1|CNS09IJU Single read from an extremity of a full-length cDNA clone made from
            Anopheles gambiae total adult females. 5-PRIME end of
            clone FK0AAC40BE03 of strain 6-9 of Anopheles gambiae
            (African malaria mosquito)
          Length = 1047

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 233  tccagaaggcgaccaaggcg 252
            ||||||||||||||||||||
Sbjct: 1028 tccagaaggcgaccaaggcg 1047
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>emb|BX054899.1|CNS09EIV Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 5-PRIME end of
           clone FK0AAC33BB01 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 941

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 233 tccagaaggcgaccaaggcg 252
           ||||||||||||||||||||
Sbjct: 604 tccagaaggcgaccaaggcg 623
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>emb|BX046530.1|CNS0982E Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 3-PRIME end of
           clone FK0AAC20AH06 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 947

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 233 tccagaaggcgaccaaggcg 252
           ||||||||||||||||||||
Sbjct: 664 tccagaaggcgaccaaggcg 645
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>emb|AL606647.3|OSJN00096 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0012E24,
             complete sequence
          Length = 127506

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 95    tgatccccaacctctccgcc 114
             ||||||||||||||||||||
Sbjct: 58084 tgatccccaacctctccgcc 58065
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 95       tgatccccaacctctccgcc 114
                ||||||||||||||||||||
Sbjct: 27789414 tgatccccaacctctccgcc 27789395
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>ref|XM_311198.2| Anopheles gambiae str. PEST ENSANGP00000019083 (ENSANGG00000016594),
            mRNA
          Length = 1481

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 233  tccagaaggcgaccaaggcg 252
            ||||||||||||||||||||
Sbjct: 1141 tccagaaggcgaccaaggcg 1160


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,451,697
Number of Sequences: 3902068
Number of extensions: 2451697
Number of successful extensions: 73950
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 73793
Number of HSP's gapped (non-prelim): 155
length of query: 409
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 387
effective length of database: 17,147,199,772
effective search space: 6635966311764
effective search space used: 6635966311764
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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