Clone Information

BLAST Search Result

Clone Name	bast78e11
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	PROD_ARATH (P92983) Proline oxidase, mitochondrial precursor (EC...	69	2e-12
2	PROD_CAEEL (O45228) Probable proline oxidase, mitochondrial prec...	44	8e-05
3	PGK_MYCAV (O32848) Phosphoglycerate kinase (EC 2.7.2.3) (Fragment)	35	0.048
4	PROD_SCHPO (O74524) Probable proline oxidase, mitochondrial prec...	32	0.53
5	IOJAP_MAIZE (Q41822) Protein Iojap	32	0.53
6	PROD_MOUSE (Q9WU79) Proline oxidase, mitochondrial precursor (EC...	31	0.69
7	CUTL1_CANFA (P39881) Homeobox protein cut-like 1 (CCAAT displace...	31	0.69
8	Y3466_MYCTU (O06331) Hypothetical protein Rv3466/MT3572	31	0.90
9	Y1614_MYCBO (P0A5F2) Hypothetical protein Mb1614c	31	0.90
10	Y1588_MYCTU (P0A5F1) Hypothetical protein Rv1588c/MT1623	31	0.90
11	PROD_HUMAN (O43272) Proline oxidase, mitochondrial precursor (EC...	30	1.5
12	PROD_DROME (Q04499) Proline oxidase, mitochondrial precursor (EC...	30	1.5
13	KR101_HUMAN (P60331) Keratin-associated protein 10-1 (Keratin-as...	30	1.5
14	MK04_HUMAN (P31152) Mitogen-activated protein kinase 4 (EC 2.7.1...	29	2.6
15	TGON1_MOUSE (Q62313) Trans-Golgi network integral membrane prote...	29	2.6
16	DHX8_ARATH (Q38953) Probable pre-mRNA-splicing factor ATP-depend...	29	2.6
17	V70K_TYMVA (P20131) 69 kDa protein	29	3.4
18	KR105_HUMAN (P60370) Keratin-associated protein 10-5 (Keratin-as...	29	3.4
19	HSP1_ALLMI (Q7LZB6) Sperm protamine P1-type (Protamine II)	29	3.4
20	NXF1_RAT (O88984) Nuclear RNA export factor 1 (Tip-associating p...	29	3.4
21	TGON2_MOUSE (Q62314) Trans-Golgi network integral membrane prote...	28	4.5
22	PLSX_DEIRA (Q46578) Fatty acid/phospholipid synthesis protein plsX	28	5.8
23	FOXD2_MOUSE (O35392) Forkhead box protein D2 (Mesoderm/mesenchym...	28	5.8
24	COBA2_HUMAN (P13942) Collagen alpha-2(XI) chain precursor	28	5.8
25	CACB2_BOVIN (Q9MZL5) Voltage-dependent L-type calcium channel be...	28	5.8
26	VP40_HCMVA (P16753) Capsid protein P40 [Contains: Assemblin (Pro...	28	5.8
27	KR104_HUMAN (P60372) Keratin-associated protein 10-4 (Keratin-as...	28	5.8
28	CADH3_HUMAN (P22223) Cadherin-3 precursor (Placental-cadherin) (...	28	5.8
29	IF2_CARHZ (Q3AB98) Translation initiation factor IF-2	28	7.6
30	HSP1_LAGHI (Q9GLQ2) Sperm protamine P1	28	7.6
31	CARD_PECCC (Q9XB58) Carbapenem antibiotics biosynthesis protein ...	28	7.6
32	V70K_TYMVC (P28478) 69 kDa protein	27	10.0
33	SNIP1_MOUSE (Q8BIZ6) Smad nuclear-interacting protein 1	27	10.0
34	LSD1_MOUSE (Q6ZQ88) Lysine-specific histone demethylase 1 (EC 1....	27	10.0
35	TRAT1_MOUSE (Q3UU67) T-cell receptor-associated transmembrane ad...	27	10.0
36	VE2_HPV36 (P50809) Regulatory protein E2	27	10.0
37	NADE_COREF (Q8FMS2) NH(3)-dependent NAD(+) synthetase (EC 6.3.1.5)	27	10.0
38	MEGF9_HUMAN (Q9H1U4) Multiple epidermal growth factor-like domai...	27	10.0
39	CS029_MOUSE (Q9CS00) Protein C19orf29 homolog	27	10.0

>PROD_ARATH (P92983) Proline oxidase, mitochondrial precursor (EC 1.5.3.-)|
           (Osmotic stress-induced proline dehydrogenase)
          Length = 499

 Score = 69.3 bits (168), Expect = 2e-12
 Identities = 38/108 (35%), Positives = 56/108 (51%), Gaps = 4/108 (3%)
 Frame = +1

Query: 1   QQQHQVLEFEDTGRLFTGEPSTALVRTLAALQLMSAGPLVDVG---IXXXXXXXXXXXXX 171
           +Q H  L+  D  RLF+  P++ L+R+ A L   + GP+VD+G   +             
Sbjct: 57  EQSHDGLDLSDQARLFSSIPTSDLLRSTAVLHAAAIGPMVDLGTWVMSSKLMDASVTRGM 116

Query: 172 XXXXXXXXXYKHFCAGETADEAAARVQRLWRG-GMGGILDYGIEDAED 312
                    Y HFCAGE AD AA RV+ ++   G+ G+L YG+E A+D
Sbjct: 117 VLGLVKSTFYDHFCAGEDADAAAERVRSVYEATGLKGMLVYGVEHADD 164

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>PROD_CAEEL (O45228) Probable proline oxidase, mitochondrial precursor (EC|
           1.5.3.-) (Proline dehydrogenase)
          Length = 616

 Score = 44.3 bits (103), Expect = 8e-05
 Identities = 30/95 (31%), Positives = 41/95 (43%), Gaps = 1/95 (1%)
 Frame = +1

Query: 19  LEFEDTGRLFTGEPSTALVRTLAALQLMSAGPLVDVG-IXXXXXXXXXXXXXXXXXXXXX 195
           L FE+T   F  + +T LVR L  L+L     LV+   I                     
Sbjct: 59  LSFENTKEAFKSKSNTELVRALVVLRLCGIQTLVNQNQIILNTMRRVLGKNLFKKTLKNT 118

Query: 196 XYKHFCAGETADEAAARVQRLWRGGMGGILDYGIE 300
            + HF AGET +E    V++L   G+  ILDY +E
Sbjct: 119 FFGHFVAGETEEEVRHVVEKLRNYGVKSILDYSVE 153

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>PGK_MYCAV (O32848) Phosphoglycerate kinase (EC 2.7.2.3) (Fragment)|
          Length = 388

 Score = 35.0 bits (79), Expect = 0.048
 Identities = 24/63 (38%), Positives = 27/63 (42%), Gaps = 1/63 (1%)
 Frame = -1

Query: 243 GRGLIGGLPGAEVLVRRGPRRGLDHGAGGHRRRPQRRDAHVHQR-ARGHELQRRERAHQS 67
           G G++ G  G       GP R    G GGHRR   RR     +R A G    RR R  Q 
Sbjct: 75  GPGVVAGPGGRRARRAAGPARAAGLGRGGHRRPGPRRGVDRRRRPAAGKHPVRRPRNVQG 134

Query: 66  RGR 58
           R R
Sbjct: 135 RRR 137

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>PROD_SCHPO (O74524) Probable proline oxidase, mitochondrial precursor (EC|
           1.5.3.-) (Proline dehydrogenase)
          Length = 492

 Score = 31.6 bits (70), Expect = 0.53
 Identities = 14/34 (41%), Positives = 17/34 (50%)
 Frame = +1

Query: 199 YKHFCAGETADEAAARVQRLWRGGMGGILDYGIE 300
           YKHFC GET     A +  L   G+   L+Y  E
Sbjct: 103 YKHFCGGETPQAVMATMDTLQAAGITSCLNYSRE 136

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>IOJAP_MAIZE (Q41822) Protein Iojap|
          Length = 228

 Score = 31.6 bits (70), Expect = 0.53
 Identities = 16/37 (43%), Positives = 18/37 (48%)
 Frame = -1

Query: 246 PGRGLIGGLPGAEVLVRRGPRRGLDHGAGGHRRRPQR 136
           P  GL    P A  L  R  RR    G+GGHR  PQ+
Sbjct: 9   PSHGLACAPPAAVTLNPRARRRRASSGSGGHRSSPQQ 45

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>PROD_MOUSE (Q9WU79) Proline oxidase, mitochondrial precursor (EC 1.5.3.-)|
           (Proline dehydrogenase)
          Length = 497

 Score = 31.2 bits (69), Expect = 0.69
 Identities = 14/35 (40%), Positives = 20/35 (57%)
 Frame = +1

Query: 199 YKHFCAGETADEAAARVQRLWRGGMGGILDYGIED 303
           Y HF AGE  +     ++     G+G ILDYG+E+
Sbjct: 11  YGHFVAGEDQESIRPLIRHNKAFGVGFILDYGVEE 45

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>CUTL1_CANFA (P39881) Homeobox protein cut-like 1 (CCAAT displacement protein)|
            (CDP) (Homeobox protein Clox) (Clox-1) (Fragment)
          Length = 975

 Score = 31.2 bits (69), Expect = 0.69
 Identities = 25/76 (32%), Positives = 32/76 (42%), Gaps = 7/76 (9%)
 Frame = -1

Query: 243  GRGLIGGLPGAEVLVRRGPRRGLDHGAGGHRRRPQRR-------DAHVHQRARGHELQRR 85
            G G   G P A     RGP R     A   RRR +RR         ++ + ARG   + R
Sbjct: 843  GGGPAPGAPAAPAAAARGPSRRPGARAKPRRRRRRRRRHARGGGRRYLSRPARGGPCRAR 902

Query: 84   ERAHQSRGRLPGEEPP 37
            + AH+S   LP    P
Sbjct: 903  DGAHRS-SALPSTSAP 917

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>Y3466_MYCTU (O06331) Hypothetical protein Rv3466/MT3572|
          Length = 222

 Score = 30.8 bits (68), Expect = 0.90
 Identities = 25/71 (35%), Positives = 29/71 (40%), Gaps = 1/71 (1%)
 Frame = -1

Query: 246 PGRGLIGGLPGAEVLVRR-GPRRGLDHGAGGHRRRPQRRDAHVHQRARGHELQRRERAHQ 70
           PGR    G     +  RR GP R   HG    RRRP R       + R H  Q   R H 
Sbjct: 151 PGRRSRPGRQSRSISSRRAGPLRPAGHGLATPRRRPHRH--RTRPQTRHHPEQPAIRRHV 208

Query: 69  SRGRLPGEEPP 37
           +   LP  +PP
Sbjct: 209 TAKWLP--DPP 217

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>Y1614_MYCBO (P0A5F2) Hypothetical protein Mb1614c|
          Length = 222

 Score = 30.8 bits (68), Expect = 0.90
 Identities = 25/71 (35%), Positives = 29/71 (40%), Gaps = 1/71 (1%)
 Frame = -1

Query: 246 PGRGLIGGLPGAEVLVRR-GPRRGLDHGAGGHRRRPQRRDAHVHQRARGHELQRRERAHQ 70
           PGR    G     +  RR GP R   HG    RRRP R       + R H  Q   R H 
Sbjct: 151 PGRRSRPGRQSRSISSRRAGPLRPAGHGLATPRRRPHRH--RTRPQTRHHPEQPAIRRHV 208

Query: 69  SRGRLPGEEPP 37
           +   LP  +PP
Sbjct: 209 TAKWLP--DPP 217

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>Y1588_MYCTU (P0A5F1) Hypothetical protein Rv1588c/MT1623|
          Length = 222

 Score = 30.8 bits (68), Expect = 0.90
 Identities = 25/71 (35%), Positives = 29/71 (40%), Gaps = 1/71 (1%)
 Frame = -1

Query: 246 PGRGLIGGLPGAEVLVRR-GPRRGLDHGAGGHRRRPQRRDAHVHQRARGHELQRRERAHQ 70
           PGR    G     +  RR GP R   HG    RRRP R       + R H  Q   R H 
Sbjct: 151 PGRRSRPGRQSRSISSRRAGPLRPAGHGLATPRRRPHRH--RTRPQTRHHPEQPAIRRHV 208

Query: 69  SRGRLPGEEPP 37
           +   LP  +PP
Sbjct: 209 TAKWLP--DPP 217

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>PROD_HUMAN (O43272) Proline oxidase, mitochondrial precursor (EC 1.5.3.-)|
           (Proline dehydrogenase)
          Length = 516

 Score = 30.0 bits (66), Expect = 1.5
 Identities = 13/35 (37%), Positives = 19/35 (54%)
 Frame = +1

Query: 199 YKHFCAGETADEAAARVQRLWRGGMGGILDYGIED 303
           Y HF AGE  +     ++     G+  ILDYG+E+
Sbjct: 30  YGHFVAGEDQESIQPLLRHYRAFGVSAILDYGVEE 64

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>PROD_DROME (Q04499) Proline oxidase, mitochondrial precursor (EC 1.5.3.-)|
           (Proline dehydrogenase) (Protein sluggish-A)
          Length = 681

 Score = 30.0 bits (66), Expect = 1.5
 Identities = 14/35 (40%), Positives = 19/35 (54%)
 Frame = +1

Query: 199 YKHFCAGETADEAAARVQRLWRGGMGGILDYGIED 303
           Y HF AGE        ++RL   G+  ILDY +E+
Sbjct: 177 YGHFVAGENRHTIVPALERLRSFGVKPILDYSVEE 211

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>KR101_HUMAN (P60331) Keratin-associated protein 10-1 (Keratin-associated|
           protein 10.1) (High sulfur keratin-associated protein
           10.1) (Keratin-associated protein 18-1)
           (Keratin-associated protein 18.1)
          Length = 282

 Score = 30.0 bits (66), Expect = 1.5
 Identities = 15/38 (39%), Positives = 20/38 (52%)
 Frame = -2

Query: 119 TSGPADMSCSAASVRTRAVDGSPVKSLPVSSNSSTWCC 6
           TS P   +C    VR + V   P+  +PV S +ST CC
Sbjct: 175 TSSPCQQAC-CVPVRCKPVCCKPICCVPVCSGASTSCC 211

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>MK04_HUMAN (P31152) Mitogen-activated protein kinase 4 (EC 2.7.11.24)|
           (Extracellular signal-regulated kinase 4) (ERK-4) (MAP
           kinase isoform p63) (p63-MAPK)
          Length = 557

 Score = 29.3 bits (64), Expect = 2.6
 Identities = 21/53 (39%), Positives = 23/53 (43%)
 Frame = -1

Query: 219 PGAEVLVRRGPRRGLDHGAGGHRRRPQRRDAHVHQRARGHELQRRERAHQSRG 61
           P A  L R  P      G GG RR+P  R   VH       L R E  HQ+RG
Sbjct: 513 PSAACLPRPPPP-----GPGGRRRQPPVRPGRVH-------LPRPEALHQARG 553

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>TGON1_MOUSE (Q62313) Trans-Golgi network integral membrane protein 1 precursor|
           (TGN38A)
          Length = 353

 Score = 29.3 bits (64), Expect = 2.6
 Identities = 13/30 (43%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
 Frame = -1

Query: 192 GPRRGL-DHGAGGHRRRPQRRDAHVHQRAR 106
           GPR    DH  G  RR+P++ DA +++ AR
Sbjct: 85  GPRTAATDHSLGDSRRQPEKTDAELNETAR 114

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>DHX8_ARATH (Q38953) Probable pre-mRNA-splicing factor ATP-dependent RNA|
           helicase (EC 3.6.1.-)
          Length = 1168

 Score = 29.3 bits (64), Expect = 2.6
 Identities = 20/50 (40%), Positives = 25/50 (50%), Gaps = 4/50 (8%)
 Frame = -1

Query: 180 GLDHGAGGHRRRPQRRDAHV-HQRARGHEL---QRRERAHQSRGRLPGEE 43
           G D     +R R  RRD H   +R RG E    +R +R H+ RGR  G E
Sbjct: 137 GRDRDRDRNRDRDDRRDRHRDRERNRGDEEGEDRRSDRRHRERGRGDGGE 186

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>V70K_TYMVA (P20131) 69 kDa protein|
          Length = 628

 Score = 28.9 bits (63), Expect = 3.4
 Identities = 24/74 (32%), Positives = 27/74 (36%), Gaps = 2/74 (2%)
 Frame = -1

Query: 246 PGRGLIGGLPGAEVLVRRGPRRGLDHGAGGHRRRPQRRDAHVHQRARG--HELQRRERAH 73
           PG     G+    VL R  PRRGL      HR       +    R  G    LQR    H
Sbjct: 261 PGPFNTHGVRPLSVLPRAPPRRGLLPNPRRHRTSTGHIPSTTASRPTGPPSRLQRPVHLH 320

Query: 72  QSRGRLPGEEPPGV 31
           QS    P   P G+
Sbjct: 321 QSGPHTPDFRPSGI 334

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>KR105_HUMAN (P60370) Keratin-associated protein 10-5 (Keratin-associated|
           protein 10.5) (High sulfur keratin-associated protein
           10.5) (Keratin-associated protein 18-5)
           (Keratin-associated protein 18.5)
          Length = 271

 Score = 28.9 bits (63), Expect = 3.4
 Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
 Frame = -2

Query: 140 SAAMPTS-TSGPADMSCSAASVRTRAVDGSPVKSLPVSSNSSTWCC 6
           S+  PT  TS P   SC    V  + V   P+  +PV S +ST CC
Sbjct: 156 SSCQPTCCTSSPCQQSCYVP-VCCKPVCFKPICCVPVCSGASTSCC 200

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>HSP1_ALLMI (Q7LZB6) Sperm protamine P1-type (Protamine II)|
          Length = 56

 Score = 28.9 bits (63), Expect = 3.4
 Identities = 18/40 (45%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
 Frame = -1

Query: 195 RGPRRGLDHGAGGHRRRPQRRDAHVHQRA-RGHELQRRER 79
           R  RR   H  G +RRR +RR  + H+R  RGH  +RR+R
Sbjct: 13  RHRRRRRGHRGGRYRRR-RRRGRYGHRRHHRGHSRRRRKR 51

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>NXF1_RAT (O88984) Nuclear RNA export factor 1 (Tip-associating protein)|
           (Tip-associated protein) (mRNA export factor TAP)
          Length = 618

 Score = 28.9 bits (63), Expect = 3.4
 Identities = 15/29 (51%), Positives = 16/29 (55%)
 Frame = -1

Query: 147 RPQRRDAHVHQRARGHELQRRERAHQSRG 61
           RP RR    H R R H   RR+RA Q RG
Sbjct: 77  RPNRRRDTWHDRDRIHVTVRRDRAPQERG 105

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>TGON2_MOUSE (Q62314) Trans-Golgi network integral membrane protein 2 precursor|
           (TGN38B)
          Length = 363

 Score = 28.5 bits (62), Expect = 4.5
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = -1

Query: 189 PRRGLDHGAGGHRRRPQRRDAHVHQRAR 106
           P    DH  G  RR+P++ DA + + AR
Sbjct: 89  PTAATDHSLGDSRRQPEKTDAELKETAR 116

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>PLSX_DEIRA (Q46578) Fatty acid/phospholipid synthesis protein plsX|
          Length = 360

 Score = 28.1 bits (61), Expect = 5.8
 Identities = 21/62 (33%), Positives = 25/62 (40%), Gaps = 11/62 (17%)
 Frame = -1

Query: 186 RRGLDHGAGGHRRRPQRRDAHVHQRARGHELQRRERAHQSRGRLPGE-----------EP 40
           R  LD GAG    RP++R     Q+ R      R R   + GR PG            EP
Sbjct: 300 REHLDRGAGAGLYRPRQRRRPRRQKRRA---ACRPRPRSAAGRAPGSGVRGAAGLRTAEP 356

Query: 39  PG 34
           PG
Sbjct: 357 PG 358

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>FOXD2_MOUSE (O35392) Forkhead box protein D2 (Mesoderm/mesenchyme forkhead 2)|
           (MF-2)
          Length = 492

 Score = 28.1 bits (61), Expect = 5.8
 Identities = 20/70 (28%), Positives = 27/70 (38%), Gaps = 4/70 (5%)
 Frame = -1

Query: 228 GGLPGAEVLVRRGPRRGLDHGAGGHRRRPQRRDAHV----HQRARGHELQRRERAHQSRG 61
           GG  G E+  R GPR   D    GH   P+  +A V     +     + + R  A +   
Sbjct: 32  GGSGGGELTARSGPRAPRDVLPHGHEPPPEEAEADVAEDEEESGGCSDCEPRALAPRGAA 91

Query: 60  RLPGEEPPGV 31
              G   PGV
Sbjct: 92  AAAGSPGPGV 101

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>COBA2_HUMAN (P13942) Collagen alpha-2(XI) chain precursor|
          Length = 1736

 Score = 28.1 bits (61), Expect = 5.8
 Identities = 14/41 (34%), Positives = 21/41 (51%)
 Frame = -1

Query: 162 GGHRRRPQRRDAHVHQRARGHELQRRERAHQSRGRLPGEEP 40
           GG R RPQ +  H   RA+    Q+  R H+ + + P  +P
Sbjct: 230 GGQRERPQNQQPH---RAQRSPQQQPSRLHRPQNQEPQSQP 267

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>CACB2_BOVIN (Q9MZL5) Voltage-dependent L-type calcium channel beta-2 subunit|
           (CAB2) (Calcium channel, voltage-dependent, beta 2
           subunit)
          Length = 603

 Score = 28.1 bits (61), Expect = 5.8
 Identities = 14/48 (29%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
 Frame = -1

Query: 171 HGAGGHRRRPQRRDAHVHQRARGHELQRRERA-HQSRGRLPGEEPPGV 31
           HG G HR R  R  +    R + H    ++R+ H+S+ R   ++  G+
Sbjct: 538 HGGGEHRHREPRHRSRDPDREQDHNESNKQRSRHKSKDRYCDKDGEGL 585

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>VP40_HCMVA (P16753) Capsid protein P40 [Contains: Assemblin (Protease) (EC|
           3.4.21.97); Capsid assembly protein; Gene UL80 protein;
           Gene UL80.5 protein; C-terminal peptide]
          Length = 708

 Score = 28.1 bits (61), Expect = 5.8
 Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 6/58 (10%)
 Frame = -1

Query: 189 PRRGLDHGAGGHRRRPQRRDAHVHQRARGHELQRRERAHQSRG------RLPGEEPPG 34
           P  G +   GGHR + Q++  H H  + GH  +R+E A  S          PGE   G
Sbjct: 481 PPSGWERYDGGHRGQSQKQ--HRHGGSGGHNKRRKETAAASSSSSDEDLSFPGEAEHG 536

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>KR104_HUMAN (P60372) Keratin-associated protein 10-4 (Keratin-associated|
           protein 10.4) (High sulfur keratin-associated protein
           10.4) (Keratin-associated protein 18-4)
           (Keratin-associated protein 18.4)
          Length = 401

 Score = 28.1 bits (61), Expect = 5.8
 Identities = 14/38 (36%), Positives = 20/38 (52%)
 Frame = -2

Query: 119 TSGPADMSCSAASVRTRAVDGSPVKSLPVSSNSSTWCC 6
           TS P   +C    V  + V   PV S+P+ S +S+ CC
Sbjct: 262 TSSPCQQAC-CVPVCCKPVCCKPVGSVPICSGASSLCC 298

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>CADH3_HUMAN (P22223) Cadherin-3 precursor (Placental-cadherin) (P-cadherin)|
          Length = 829

 Score = 28.1 bits (61), Expect = 5.8
 Identities = 11/19 (57%), Positives = 15/19 (78%)
 Frame = -1

Query: 144 PQRRDAHVHQRARGHELQR 88
           PQ+ +AHV + A GHE+QR
Sbjct: 330 PQKYEAHVPENAVGHEVQR 348

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>IF2_CARHZ (Q3AB98) Translation initiation factor IF-2|
          Length = 827

 Score = 27.7 bits (60), Expect = 7.6
 Identities = 17/40 (42%), Positives = 21/40 (52%)
 Frame = -1

Query: 162 GGHRRRPQRRDAHVHQRARGHELQRRERAHQSRGRLPGEE 43
           G  R R QR D    QR  G+  QR E   + +GR PGE+
Sbjct: 93  GQSRPREQRSDRPQGQRYAGN--QRPEPRDKDKGRRPGEQ 130

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>HSP1_LAGHI (Q9GLQ2) Sperm protamine P1|
          Length = 64

 Score = 27.7 bits (60), Expect = 7.6
 Identities = 14/42 (33%), Positives = 20/42 (47%)
 Frame = -1

Query: 186 RRGLDHGAGGHRRRPQRRDAHVHQRARGHELQRRERAHQSRG 61
           R        G+RR+ +RR  +  +R R    QRR R  + RG
Sbjct: 4   RHSRSRSRSGYRRQRRRRSRYRSRRRRYRRRQRRSRRGRRRG 45

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>CARD_PECCC (Q9XB58) Carbapenem antibiotics biosynthesis protein carD|
          Length = 376

 Score = 27.7 bits (60), Expect = 7.6
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = +1

Query: 208 FCAGETADEAAARVQRLWRGGMGGILDYGIEDAED 312
           +  GET +E  +    L R G+  +LDY +E   D
Sbjct: 59  YFGGETLEEVQSTATFLARSGIACVLDYAVEGEND 93

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>V70K_TYMVC (P28478) 69 kDa protein|
          Length = 628

 Score = 27.3 bits (59), Expect = 10.0
 Identities = 23/74 (31%), Positives = 25/74 (33%), Gaps = 2/74 (2%)
 Frame = -1

Query: 246 PGRGLIGGLPGAEVLVRRGPRRGLDHGAGGHRRRPQRRDAHVHQRARG--HELQRRERAH 73
           PG     GL    VL R  PRRGL      HR            R  G    LQR    +
Sbjct: 261 PGPSNTHGLRPLSVLPRASPRRGLLPNPRRHRTSTGHIPPTTTSRPTGPPSRLQRPVHLY 320

Query: 72  QSRGRLPGEEPPGV 31
           QS    P   P  +
Sbjct: 321 QSSPHTPNFRPSSI 334

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>SNIP1_MOUSE (Q8BIZ6) Smad nuclear-interacting protein 1|
          Length = 383

 Score = 27.3 bits (59), Expect = 10.0
 Identities = 17/46 (36%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
 Frame = -1

Query: 174 DHGAGGHRRRPQRRDAHV-HQRARGHELQRRERAHQSRGRLPGEEP 40
           DH   G   R  R  +   H+RAR  E + R R H  +GR   E P
Sbjct: 105 DHPRRGREDRQHREPSEQEHRRARNSE-RDRHRGHSRQGRSSDERP 149

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>LSD1_MOUSE (Q6ZQ88) Lysine-specific histone demethylase 1 (EC 1.-.-.-) (Amine|
           oxidase flavin-containing domain protein 2) (AOF2
           protein) (BRAF35-HDAC complex protein BHC110)
          Length = 853

 Score = 27.3 bits (59), Expect = 10.0
 Identities = 15/38 (39%), Positives = 17/38 (44%)
 Frame = -2

Query: 149 GDRSAAMPTSTSGPADMSCSAASVRTRAVDGSPVKSLP 36
           G   AA P   +GP DM+  AA  RT      P  S P
Sbjct: 35  GSEVAAPPAGLTGPTDMATGAAGERTPRKKEPPRASPP 72

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>TRAT1_MOUSE (Q3UU67) T-cell receptor-associated transmembrane adapter 1 (T-cell|
           receptor-interacting molecule) (TRIM)
          Length = 187

 Score = 27.3 bits (59), Expect = 10.0
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = -1

Query: 177 LDHGAGGHRRRPQRRDAHVHQRAR 106
           LDH   G RRRP++++ +V  R +
Sbjct: 114 LDHSVKGKRRRPRKQNTNVSDRGK 137

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>VE2_HPV36 (P50809) Regulatory protein E2|
          Length = 509

 Score = 27.3 bits (59), Expect = 10.0
 Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 4/47 (8%)
 Frame = -1

Query: 213 AEVLVRRGPR--RGLDHGAGGHRRRPQRRDAH--VHQRARGHELQRR 85
           AE    RG R  RG   G+GG RRR +   +    H+R+R H ++ R
Sbjct: 348 AETTGSRGARGGRGARGGSGGGRRRGRSSSSTSPAHKRSREHSVRSR 394

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>NADE_COREF (Q8FMS2) NH(3)-dependent NAD(+) synthetase (EC 6.3.1.5)|
          Length = 277

 Score = 27.3 bits (59), Expect = 10.0
 Identities = 10/19 (52%), Positives = 15/19 (78%)
 Frame = +1

Query: 214 AGETADEAAARVQRLWRGG 270
           +GE + EAAAR++ LW+ G
Sbjct: 242 SGEVSPEAAARIEHLWKVG 260

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>MEGF9_HUMAN (Q9H1U4) Multiple epidermal growth factor-like domains 9 precursor|
           (EGF-like domain-containing protein 5) (Multiple
           EGF-like domain protein 5)
          Length = 600

 Score = 27.3 bits (59), Expect = 10.0
 Identities = 14/36 (38%), Positives = 20/36 (55%)
 Frame = -2

Query: 125 TSTSGPADMSCSAASVRTRAVDGSPVKSLPVSSNSS 18
           ++T+GPA  +  A +V       +P   LP SSNSS
Sbjct: 147 STTTGPAPTTPVATTVPAPTTPRTPTPDLPSSSNSS 182

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>CS029_MOUSE (Q9CS00) Protein C19orf29 homolog|
          Length = 772

 Score = 27.3 bits (59), Expect = 10.0
 Identities = 17/54 (31%), Positives = 21/54 (38%), Gaps = 1/54 (1%)
 Frame = -1

Query: 195 RGPRRGLDHGAGGHRRRPQRRDAHVHQRARGHELQRR-ERAHQSRGRLPGEEPP 37
           R   R   HG    RRR   R     +R+RG       E+  +SR R     PP
Sbjct: 47  RSRSRSRSHGRSSRRRREHERRRERKRRSRGRRSDSEGEQRQKSRRRSQSLRPP 100


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,954,981
Number of Sequences: 219361
Number of extensions: 435128
Number of successful extensions: 2193
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 2014
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2180
length of database: 80,573,946
effective HSP length: 79
effective length of database: 63,244,427
effective search space used: 1517866248
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result