ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast78e11
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_197664.1| Oryza sativa (japonica cultivar-group) putative... 238 9e-60
2gb|AC026758.8| Oryza sativa chromosome 10 BAC OSJNBa0015J15 geno... 238 9e-60
3dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 238 9e-60
4dbj|AK121010.1| Oryza sativa (japonica cultivar-group) cDNA clon... 238 9e-60
5gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 238 9e-60
6gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 44 0.26
7gb|AY579335.1| Wuestineaia molokaiensis strain STE-U3797 beta-tu... 44 0.26
8dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete g... 44 0.26
9gb|AE017221.1| Thermus thermophilus HB27, complete genome 44 0.26
10gb|AY720768.1| Harknessia protearum strain CBS 111831 beta-tubul... 44 0.26
11gb|AY720767.1| Harknessia protearum strain CBS 111830 beta-tubul... 44 0.26
12gb|AY720766.1| Harknessia protearum strain CBS 112616 beta-tubul... 44 0.26
13gb|AY720765.1| Harknessia protearum strain CBS 112617 beta-tubul... 44 0.26
14gb|AY720764.1| Harknessia protearum strain CBS 112618 beta-tubul... 44 0.26
15gb|AY720763.1| Harknessia leucospermi strain CBS 112619 beta-tub... 44 0.26
16gb|AY720762.1| Harknessia leucospermi strain CBS 112620 beta-tub... 44 0.26
17gb|AY720761.1| Harknessia leucospermi strain CPC 5400 beta-tubul... 44 0.26
18gb|AY720760.1| Harknessia leucospermi strain CPC 2849 beta-tubul... 44 0.26
19gb|AY720759.1| Harknessia leucospermi strain CBS 775.97 beta-tub... 44 0.26
20gb|AY720751.1| Harknessia capensis strain CBS 111829 beta-tubuli... 44 0.26
21gb|AY720750.1| Harknessia capensis strain CBS 115061 beta-tubuli... 44 0.26
22gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete ... 42 1.0
23emb|Y11548.1|SPSNBCDE S.pristinaespiralis snbC gene & snbDE gene 42 1.0
24emb|X98690.1|SPSNBCGEN S.pristinaespiralis snbC and snbDE genes 42 1.0
25emb|BX572608.1| Rhodopseudomonas palustris CGA009 complete genom... 42 1.0
26gb|CP000249.1| Frankia sp. CcI3, complete genome 42 1.0
27emb|AJ243257.1|SNA243257 Streptomyces natalensis plasmid pSNA1 i... 42 1.0
28gb|AY720758.1| Harknessia hawaiiensis strain CBS 111122 beta-tub... 42 1.0
29gb|AY720757.1| Harknessia hawaiiensis strain CBS 110728 beta-tub... 42 1.0
30gb|AY720756.1| Harknessia hawaiiensis strain CBS 115650 beta-tub... 42 1.0
31gb|AY720755.1| Harknessia hawaiiensis strain CBS 114811 beta-tub... 42 1.0
32gb|CP000110.1| Synechococcus sp. CC9605, complete genome 40 4.1
33ref|XM_479975.1| Oryza sativa (japonica cultivar-group), mRNA 40 4.1
34gb|AY596298.1| Haloarcula marismortui ATCC 43049 chromosome II, ... 40 4.1
35gb|AF357202.1| Streptomyces nodosus amphotericin biosynthetic ge... 40 4.1
36gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, comp... 40 4.1
37gb|AY729048.1| Crithidia fasciculata poly(A)-binding protein (RB... 40 4.1
38ref|XM_418083.1| PREDICTED: Gallus gallus similar to 1700081L11R... 40 4.1
39gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, com... 40 4.1
40gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 4.1
41ref|XM_852801.1| PREDICTED: Canis familiaris similar to Polyaden... 40 4.1
42ref|XM_852766.1| PREDICTED: Canis familiaris similar to Polyaden... 40 4.1
43ref|XM_852728.1| PREDICTED: Canis familiaris similar to Polyaden... 40 4.1
44ref|XM_852688.1| PREDICTED: Canis familiaris similar to Polyaden... 40 4.1
45ref|XM_852646.1| PREDICTED: Canis familiaris similar to Polyaden... 40 4.1
46ref|XM_852075.1| PREDICTED: Canis familiaris similar to Polyaden... 40 4.1
47ref|XM_851990.1| PREDICTED: Canis familiaris similar to Polyaden... 40 4.1
48ref|XM_851907.1| PREDICTED: Canis familiaris similar to Polyaden... 40 4.1
49ref|XM_852603.1| PREDICTED: Canis familiaris similar to Polyaden... 40 4.1
50ref|XM_852563.1| PREDICTED: Canis familiaris similar to Polyaden... 40 4.1
51ref|XM_852524.1| PREDICTED: Canis familiaris similar to Polyaden... 40 4.1
52ref|XM_852486.1| PREDICTED: Canis familiaris similar to Polyaden... 40 4.1
53ref|XM_852446.1| PREDICTED: Canis familiaris similar to Polyaden... 40 4.1
54ref|XM_852406.1| PREDICTED: Canis familiaris similar to Polyaden... 40 4.1
55ref|XM_852365.1| PREDICTED: Canis familiaris similar to Polyaden... 40 4.1
56ref|XM_852327.1| PREDICTED: Canis familiaris similar to Polyaden... 40 4.1
57ref|XM_852281.1| PREDICTED: Canis familiaris similar to Polyaden... 40 4.1
58ref|XM_852244.1| PREDICTED: Canis familiaris similar to Polyaden... 40 4.1
59ref|XM_852203.1| PREDICTED: Canis familiaris similar to Polyaden... 40 4.1
60ref|XM_539581.2| PREDICTED: Canis familiaris similar to Polyaden... 40 4.1
61ref|XM_852122.1| PREDICTED: Canis familiaris similar to Polyaden... 40 4.1
62emb|CR956427.7| Pig DNA sequence from clone CH242-51O7 on chromo... 40 4.1
63gb|CP000316.1| Polaromonas sp. JS666, complete genome 40 4.1
64emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromos... 40 4.1
65emb|AL939128.1|SCO939128 Streptomyces coelicolor A3(2) complete ... 40 4.1
66gb|AC118675.2| Genomic sequence for Oryza sativa, Nipponbare str... 40 4.1
67gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete g... 40 4.1
68dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.1
69dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.1
70gb|AC134231.2| Oryza sativa (japonica cultivar-group) chromosome... 40 4.1
71dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 40 4.1
72dbj|AP003896.3| Oryza sativa (japonica cultivar-group) genomic D... 40 4.1
73dbj|AP005620.3| Oryza sativa (japonica cultivar-group) genomic D... 40 4.1
74emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,comp... 40 4.1
75gb|AE015451.1| Pseudomonas putida KT2440 complete genome 40 4.1
76gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, com... 40 4.1
77gb|AC145927.3| Gallus gallus BAC clone CH261-29M22 from chromoso... 40 4.1
78emb|CR956622.12| Pig DNA sequence from clone PigE-219N9 on chrom... 40 4.1 
>ref|NM_197664.1| Oryza sativa (japonica cultivar-group) putative proline oxidase
           (OSJNBa0015J15.31), mRNA
          Length = 1428

 Score =  238 bits (120), Expect = 9e-60
 Identities = 255/300 (85%)
 Strand = Plus / Plus

                                                                       
Query: 13  caggtgctggagtttgaggacaccgggaggctcttcaccggggagccgtccacggctctg 72
           |||||| ||||||||| ||| |||| |||||| ||| ||||||||  ||| ||| | |||
Sbjct: 163 caggtgttggagtttggggataccgagaggctgttcgccggggagaggtcgacgtcgctg 222

                                                                       
Query: 73  gtgcgcacgctcgcggcgctgcagctcatgtccgcgggcccgctggtggacgtgggcatc 132
           |||||||||||||| | |||||||    |||| | ||||||||| ||||||||||  |  
Sbjct: 223 gtgcgcacgctcgccgtgctgcaggcgctgtcggtgggcccgctcgtggacgtggcgacg 282

                                                                       
Query: 133 gcggcgctgcggtctccggcggtggccgccagccccgtggtccaggccgcggcgcgggcc 192
           ||||||||| |||| |||||||||||||  ||| | | ||  |  ||||||||| |||||
Sbjct: 283 gcggcgctgaggtcgccggcggtggccgggagcgcggcggggcgcgccgcggcgagggcc 342

                                                                       
Query: 193 acggcgtacaagcacttctgcgccggggagaccgccgatgaggccgcggcccgggtgcag 252
           || |||||| |||||||||||||||||||||||||||| |||||||| ||   |||||  
Sbjct: 343 accgcgtaccagcacttctgcgccggggagaccgccgaggaggccgccgcggcggtgcgc 402

                                                                       
Query: 253 cgcctctggcgcggcggcatgggcgggatcctcgactacggcatcgaggacgccgaggac 312
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 cgcctctggcgcggcggcatgggcgggatcctcgactacggcatcgaggacgccgaggac 462
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>gb|AC026758.8| Oryza sativa chromosome 10 BAC OSJNBa0015J15 genomic sequence, complete
              sequence
          Length = 144798

 Score =  238 bits (120), Expect = 9e-60
 Identities = 255/300 (85%)
 Strand = Plus / Minus

                                                                          
Query: 13     caggtgctggagtttgaggacaccgggaggctcttcaccggggagccgtccacggctctg 72
              |||||| ||||||||| ||| |||| |||||| ||| ||||||||  ||| ||| | |||
Sbjct: 106382 caggtgttggagtttggggataccgagaggctgttcgccggggagaggtcgacgtcgctg 106323

                                                                          
Query: 73     gtgcgcacgctcgcggcgctgcagctcatgtccgcgggcccgctggtggacgtgggcatc 132
              |||||||||||||| | |||||||    |||| | ||||||||| ||||||||||  |  
Sbjct: 106322 gtgcgcacgctcgccgtgctgcaggcgctgtcggtgggcccgctcgtggacgtggcgacg 106263

                                                                          
Query: 133    gcggcgctgcggtctccggcggtggccgccagccccgtggtccaggccgcggcgcgggcc 192
              ||||||||| |||| |||||||||||||  ||| | | ||  |  ||||||||| |||||
Sbjct: 106262 gcggcgctgaggtcgccggcggtggccgggagcgcggcggggcgcgccgcggcgagggcc 106203

                                                                          
Query: 193    acggcgtacaagcacttctgcgccggggagaccgccgatgaggccgcggcccgggtgcag 252
              || |||||| |||||||||||||||||||||||||||| |||||||| ||   |||||  
Sbjct: 106202 accgcgtaccagcacttctgcgccggggagaccgccgaggaggccgccgcggcggtgcgc 106143

                                                                          
Query: 253    cgcctctggcgcggcggcatgggcgggatcctcgactacggcatcgaggacgccgaggac 312
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 106142 cgcctctggcgcggcggcatgggcgggatcctcgactacggcatcgaggacgccgaggac 106083
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score =  238 bits (120), Expect = 9e-60
 Identities = 255/300 (85%)
 Strand = Plus / Plus

                                                                            
Query: 13       caggtgctggagtttgaggacaccgggaggctcttcaccggggagccgtccacggctctg 72
                |||||| ||||||||| ||| |||| |||||| ||| ||||||||  ||| ||| | |||
Sbjct: 21099324 caggtgttggagtttggggataccgagaggctgttcgccggggagaggtcgacgtcgctg 21099383

                                                                            
Query: 73       gtgcgcacgctcgcggcgctgcagctcatgtccgcgggcccgctggtggacgtgggcatc 132
                |||||||||||||| | |||||||    |||| | ||||||||| ||||||||||  |  
Sbjct: 21099384 gtgcgcacgctcgccgtgctgcaggcgctgtcggtgggcccgctcgtggacgtggcgacg 21099443

                                                                            
Query: 133      gcggcgctgcggtctccggcggtggccgccagccccgtggtccaggccgcggcgcgggcc 192
                ||||||||| |||| |||||||||||||  ||| | | ||  |  ||||||||| |||||
Sbjct: 21099444 gcggcgctgaggtcgccggcggtggccgggagcgcggcggggcgcgccgcggcgagggcc 21099503

                                                                            
Query: 193      acggcgtacaagcacttctgcgccggggagaccgccgatgaggccgcggcccgggtgcag 252
                || |||||| |||||||||||||||||||||||||||| |||||||| ||   |||||  
Sbjct: 21099504 accgcgtaccagcacttctgcgccggggagaccgccgaggaggccgccgcggcggtgcgc 21099563

                                                                            
Query: 253      cgcctctggcgcggcggcatgggcgggatcctcgactacggcatcgaggacgccgaggac 312
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21099564 cgcctctggcgcggcggcatgggcgggatcctcgactacggcatcgaggacgccgaggac 21099623
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>dbj|AK121010.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023047B13, full
           insert sequence
          Length = 1782

 Score =  238 bits (120), Expect = 9e-60
 Identities = 255/300 (85%)
 Strand = Plus / Plus

                                                                       
Query: 13  caggtgctggagtttgaggacaccgggaggctcttcaccggggagccgtccacggctctg 72
           |||||| ||||||||| ||| |||| |||||| ||| ||||||||  ||| ||| | |||
Sbjct: 290 caggtgttggagtttggggataccgagaggctgttcgccggggagaggtcgacgtcgctg 349

                                                                       
Query: 73  gtgcgcacgctcgcggcgctgcagctcatgtccgcgggcccgctggtggacgtgggcatc 132
           |||||||||||||| | |||||||    |||| | ||||||||| ||||||||||  |  
Sbjct: 350 gtgcgcacgctcgccgtgctgcaggcgctgtcggtgggcccgctcgtggacgtggcgacg 409

                                                                       
Query: 133 gcggcgctgcggtctccggcggtggccgccagccccgtggtccaggccgcggcgcgggcc 192
           ||||||||| |||| |||||||||||||  ||| | | ||  |  ||||||||| |||||
Sbjct: 410 gcggcgctgaggtcgccggcggtggccgggagcgcggcggggcgcgccgcggcgagggcc 469

                                                                       
Query: 193 acggcgtacaagcacttctgcgccggggagaccgccgatgaggccgcggcccgggtgcag 252
           || |||||| |||||||||||||||||||||||||||| |||||||| ||   |||||  
Sbjct: 470 accgcgtaccagcacttctgcgccggggagaccgccgaggaggccgccgcggcggtgcgc 529

                                                                       
Query: 253 cgcctctggcgcggcggcatgggcgggatcctcgactacggcatcgaggacgccgaggac 312
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 530 cgcctctggcgcggcggcatgggcgggatcctcgactacggcatcgaggacgccgaggac 589
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score =  238 bits (120), Expect = 9e-60
 Identities = 255/300 (85%)
 Strand = Plus / Plus

                                                                            
Query: 13       caggtgctggagtttgaggacaccgggaggctcttcaccggggagccgtccacggctctg 72
                |||||| ||||||||| ||| |||| |||||| ||| ||||||||  ||| ||| | |||
Sbjct: 21110588 caggtgttggagtttggggataccgagaggctgttcgccggggagaggtcgacgtcgctg 21110647

                                                                            
Query: 73       gtgcgcacgctcgcggcgctgcagctcatgtccgcgggcccgctggtggacgtgggcatc 132
                |||||||||||||| | |||||||    |||| | ||||||||| ||||||||||  |  
Sbjct: 21110648 gtgcgcacgctcgccgtgctgcaggcgctgtcggtgggcccgctcgtggacgtggcgacg 21110707

                                                                            
Query: 133      gcggcgctgcggtctccggcggtggccgccagccccgtggtccaggccgcggcgcgggcc 192
                ||||||||| |||| |||||||||||||  ||| | | ||  |  ||||||||| |||||
Sbjct: 21110708 gcggcgctgaggtcgccggcggtggccgggagcgcggcggggcgcgccgcggcgagggcc 21110767

                                                                            
Query: 193      acggcgtacaagcacttctgcgccggggagaccgccgatgaggccgcggcccgggtgcag 252
                || |||||| |||||||||||||||||||||||||||| |||||||| ||   |||||  
Sbjct: 21110768 accgcgtaccagcacttctgcgccggggagaccgccgaggaggccgccgcggcggtgcgc 21110827

                                                                            
Query: 253      cgcctctggcgcggcggcatgggcgggatcctcgactacggcatcgaggacgccgaggac 312
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21110828 cgcctctggcgcggcggcatgggcgggatcctcgactacggcatcgaggacgccgaggac 21110887
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 44.1 bits (22), Expect = 0.26
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                             
Query: 113     cgctggtggacgtgggcatcgcggcgctgc 142
               ||||||||| ||||||| ||||||||||||
Sbjct: 1416933 cgctggtggtcgtgggcctcgcggcgctgc 1416962
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>gb|AY579335.1| Wuestineaia molokaiensis strain STE-U3797 beta-tubulin (tub2) gene,
           exons 2 through 6 and partial cds
          Length = 870

 Score = 44.1 bits (22), Expect = 0.26
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 1   cagcagcagcaccaggtgctgg 22
           ||||||||||||||||||||||
Sbjct: 309 cagcagcagcaccaggtgctgg 288
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>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome
          Length = 1849742

 Score = 44.1 bits (22), Expect = 0.26
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                                 
Query: 165     ccccgtggtccaggccgcggcgcgggccacggcg 198
               ||||||||||| |||| ||| |||||||||||||
Sbjct: 1339608 ccccgtggtcctggcctcggtgcgggccacggcg 1339575
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>gb|AE017221.1| Thermus thermophilus HB27, complete genome
          Length = 1894877

 Score = 44.1 bits (22), Expect = 0.26
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                                 
Query: 165     ccccgtggtccaggccgcggcgcgggccacggcg 198
               ||||||||||| |||| ||| |||||||||||||
Sbjct: 1016051 ccccgtggtcctggcctcggtgcgggccacggcg 1016018
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>gb|AY720768.1| Harknessia protearum strain CBS 111831 beta-tubulin (tub2) gene,
           exons 2 through 6 and partial cds
          Length = 870

 Score = 44.1 bits (22), Expect = 0.26
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 1   cagcagcagcaccaggtgctgg 22
           ||||||||||||||||||||||
Sbjct: 312 cagcagcagcaccaggtgctgg 291
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>gb|AY720767.1| Harknessia protearum strain CBS 111830 beta-tubulin (tub2) gene,
           exons 2 through 6 and partial cds
          Length = 870

 Score = 44.1 bits (22), Expect = 0.26
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 1   cagcagcagcaccaggtgctgg 22
           ||||||||||||||||||||||
Sbjct: 312 cagcagcagcaccaggtgctgg 291
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>gb|AY720766.1| Harknessia protearum strain CBS 112616 beta-tubulin (tub2) gene,
           exons 2 through 6 and partial cds
          Length = 868

 Score = 44.1 bits (22), Expect = 0.26
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 1   cagcagcagcaccaggtgctgg 22
           ||||||||||||||||||||||
Sbjct: 312 cagcagcagcaccaggtgctgg 291
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>gb|AY720765.1| Harknessia protearum strain CBS 112617 beta-tubulin (tub2) gene,
           exons 2 through 6 and partial cds
          Length = 870

 Score = 44.1 bits (22), Expect = 0.26
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 1   cagcagcagcaccaggtgctgg 22
           ||||||||||||||||||||||
Sbjct: 312 cagcagcagcaccaggtgctgg 291
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>gb|AY720764.1| Harknessia protearum strain CBS 112618 beta-tubulin (tub2) gene,
           exons 2 through 6 and partial cds
          Length = 870

 Score = 44.1 bits (22), Expect = 0.26
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 1   cagcagcagcaccaggtgctgg 22
           ||||||||||||||||||||||
Sbjct: 312 cagcagcagcaccaggtgctgg 291
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>gb|AY720763.1| Harknessia leucospermi strain CBS 112619 beta-tubulin (tub2) gene,
           exons 2 through 6 and partial cds
          Length = 872

 Score = 44.1 bits (22), Expect = 0.26
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 1   cagcagcagcaccaggtgctgg 22
           ||||||||||||||||||||||
Sbjct: 312 cagcagcagcaccaggtgctgg 291
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>gb|AY720762.1| Harknessia leucospermi strain CBS 112620 beta-tubulin (tub2) gene,
           exons 2 through 6 and partial cds
          Length = 873

 Score = 44.1 bits (22), Expect = 0.26
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 1   cagcagcagcaccaggtgctgg 22
           ||||||||||||||||||||||
Sbjct: 312 cagcagcagcaccaggtgctgg 291
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>gb|AY720761.1| Harknessia leucospermi strain CPC 5400 beta-tubulin (tub2) gene,
           exons 2 through 6 and partial cds
          Length = 874

 Score = 44.1 bits (22), Expect = 0.26
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 1   cagcagcagcaccaggtgctgg 22
           ||||||||||||||||||||||
Sbjct: 312 cagcagcagcaccaggtgctgg 291
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>gb|AY720760.1| Harknessia leucospermi strain CPC 2849 beta-tubulin (tub2) gene,
           exons 2 through 6 and partial cds
          Length = 870

 Score = 44.1 bits (22), Expect = 0.26
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 1   cagcagcagcaccaggtgctgg 22
           ||||||||||||||||||||||
Sbjct: 311 cagcagcagcaccaggtgctgg 290
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>gb|AY720759.1| Harknessia leucospermi strain CBS 775.97 beta-tubulin (tub2) gene,
           exons 2 through 6 and partial cds
          Length = 873

 Score = 44.1 bits (22), Expect = 0.26
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 1   cagcagcagcaccaggtgctgg 22
           ||||||||||||||||||||||
Sbjct: 312 cagcagcagcaccaggtgctgg 291
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>gb|AY720751.1| Harknessia capensis strain CBS 111829 beta-tubulin (tub2) gene,
           exons 2 through 6 and partial cds
          Length = 872

 Score = 44.1 bits (22), Expect = 0.26
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 1   cagcagcagcaccaggtgctgg 22
           ||||||||||||||||||||||
Sbjct: 312 cagcagcagcaccaggtgctgg 291
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>gb|AY720750.1| Harknessia capensis strain CBS 115061 beta-tubulin (tub2) gene,
           exons 2 through 6 and partial cds
          Length = 817

 Score = 44.1 bits (22), Expect = 0.26
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 1   cagcagcagcaccaggtgctgg 22
           ||||||||||||||||||||||
Sbjct: 312 cagcagcagcaccaggtgctgg 291
to top
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome
          Length = 2584158

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 80      cgctcgcggcgctgcagctca 100
               |||||||||||||||||||||
Sbjct: 2262601 cgctcgcggcgctgcagctca 2262581
to top
>emb|Y11548.1|SPSNBCDE S.pristinaespiralis snbC gene & snbDE gene
          Length = 22449

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 179 ccgcggcgcgggccacggcgt 199
           |||||||||||||||||||||
Sbjct: 853 ccgcggcgcgggccacggcgt 833
to top
>emb|X98690.1|SPSNBCGEN S.pristinaespiralis snbC and snbDE genes
          Length = 22449

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 179 ccgcggcgcgggccacggcgt 199
           |||||||||||||||||||||
Sbjct: 853 ccgcggcgcgggccacggcgt 833
to top
>emb|BX572608.1| Rhodopseudomonas palustris CGA009 complete genome; segment 16/16
          Length = 227214

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 284    tcgactacggcatcgaggacgccga 308
              |||||||||||||||||| ||||||
Sbjct: 208421 tcgactacggcatcgaggtcgccga 208397
to top
>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 228     cgatgaggccgcggcccgggt 248
               |||||||||||||||||||||
Sbjct: 3810057 cgatgaggccgcggcccgggt 3810037



 Score = 40.1 bits (20), Expect = 4.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 259    tggcgcggcggcatgggcgggatc 282
              |||||||||||||||| |||||||
Sbjct: 614960 tggcgcggcggcatggccgggatc 614983
to top
>emb|AJ243257.1|SNA243257 Streptomyces natalensis plasmid pSNA1 including spda, kora, spdb2 and
            rep genes
          Length = 9367

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 177  ggccgcggcgcgggccacggc 197
            |||||||||||||||||||||
Sbjct: 5981 ggccgcggcgcgggccacggc 5961
to top
>gb|AY720758.1| Harknessia hawaiiensis strain CBS 111122 beta-tubulin (tub2) gene,
           exons 2 through 6 and partial cds
          Length = 881

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 1   cagcagcagcaccaggtgctg 21
           |||||||||||||||||||||
Sbjct: 309 cagcagcagcaccaggtgctg 289
to top
>gb|AY720757.1| Harknessia hawaiiensis strain CBS 110728 beta-tubulin (tub2) gene,
           exons 2 through 6 and partial cds
          Length = 881

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 1   cagcagcagcaccaggtgctg 21
           |||||||||||||||||||||
Sbjct: 309 cagcagcagcaccaggtgctg 289
to top
>gb|AY720756.1| Harknessia hawaiiensis strain CBS 115650 beta-tubulin (tub2) gene,
           exons 2 through 6 and partial cds
          Length = 799

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 1   cagcagcagcaccaggtgctg 21
           |||||||||||||||||||||
Sbjct: 309 cagcagcagcaccaggtgctg 289
to top
>gb|AY720755.1| Harknessia hawaiiensis strain CBS 114811 beta-tubulin (tub2) gene,
           exons 2 through 6 and partial cds
          Length = 792

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 1   cagcagcagcaccaggtgctg 21
           |||||||||||||||||||||
Sbjct: 309 cagcagcagcaccaggtgctg 289
to top
>gb|CP000110.1| Synechococcus sp. CC9605, complete genome
          Length = 2510659

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 12      ccaggtgctggagtttgagg 31
               ||||||||||||||||||||
Sbjct: 1029332 ccaggtgctggagtttgagg 1029351
to top
>ref|XM_479975.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2487

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 88   gcgctgcagctcatgtccgc 107
            ||||||||||||||||||||
Sbjct: 1345 gcgctgcagctcatgtccgc 1364
to top
>gb|AY596298.1| Haloarcula marismortui ATCC 43049 chromosome II, complete sequence
          Length = 288050

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 224    ccgccgatgaggccgcggcc 243
              ||||||||||||||||||||
Sbjct: 242026 ccgccgatgaggccgcggcc 242007
to top
>gb|AF357202.1| Streptomyces nodosus amphotericin biosynthetic gene cluster, complete
             sequence
          Length = 113193

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 4     cagcagcaccaggtgctgga 23
             ||||||||||||||||||||
Sbjct: 32377 cagcagcaccaggtgctgga 32358
to top
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence
          Length = 3510148

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 260     ggcgcggcggcatgggcggg 279
               ||||||||||||||||||||
Sbjct: 1765758 ggcgcggcggcatgggcggg 1765739



 Score = 40.1 bits (20), Expect = 4.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 74      tgcgcacgctcgcggcgctgcagc 97
               ||||||||||||||| ||||||||
Sbjct: 1253299 tgcgcacgctcgcggggctgcagc 1253276
to top
>gb|AY729048.1| Crithidia fasciculata poly(A)-binding protein (RBP63) gene, complete
            cds
          Length = 2951

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 74   tgcgcacgctcgcggcgctg 93
            ||||||||||||||||||||
Sbjct: 1712 tgcgcacgctcgcggcgctg 1693
to top
>ref|XM_418083.1| PREDICTED: Gallus gallus similar to 1700081L11Rik protein
            (LOC419961), mRNA
          Length = 4119

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 1    cagcagcagcaccaggtgctggag 24
            ||||||||||| ||||||||||||
Sbjct: 2158 cagcagcagcagcaggtgctggag 2181
to top
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence
          Length = 4126292

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 260     ggcgcggcggcatgggcggg 279
               ||||||||||||||||||||
Sbjct: 3011244 ggcgcggcggcatgggcggg 3011225
to top
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 176      aggccgcggcgcgggccacg 195
                ||||||||||||||||||||
Sbjct: 12929149 aggccgcggcgcgggccacg 12929130
to top
>ref|XM_852801.1| PREDICTED: Canis familiaris similar to Polyadenylate-binding
           protein 4 (Poly(A)-binding protein 4) (PABP 4)
           (Inducible poly(A)-binding protein) (iPABP)
           (Activated-platelet protein-1) (APP-1), transcript
           variant 23 (LOC482464), mRNA
          Length = 2608

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 178 gccgcggcgcgggccacggc 197
           ||||||||||||||||||||
Sbjct: 285 gccgcggcgcgggccacggc 304
to top
>ref|XM_852766.1| PREDICTED: Canis familiaris similar to Polyadenylate-binding
           protein 4 (Poly(A)-binding protein 4) (PABP 4)
           (Inducible poly(A)-binding protein) (iPABP)
           (Activated-platelet protein-1) (APP-1), transcript
           variant 22 (LOC482464), mRNA
          Length = 2611

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 178 gccgcggcgcgggccacggc 197
           ||||||||||||||||||||
Sbjct: 285 gccgcggcgcgggccacggc 304
to top
>ref|XM_852728.1| PREDICTED: Canis familiaris similar to Polyadenylate-binding
           protein 4 (Poly(A)-binding protein 4) (PABP 4)
           (Inducible poly(A)-binding protein) (iPABP)
           (Activated-platelet protein-1) (APP-1), transcript
           variant 21 (LOC482464), mRNA
          Length = 2551

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 178 gccgcggcgcgggccacggc 197
           ||||||||||||||||||||
Sbjct: 285 gccgcggcgcgggccacggc 304
to top
>ref|XM_852688.1| PREDICTED: Canis familiaris similar to Polyadenylate-binding
           protein 4 (Poly(A)-binding protein 4) (PABP 4)
           (Inducible poly(A)-binding protein) (iPABP)
           (Activated-platelet protein-1) (APP-1), transcript
           variant 20 (LOC482464), mRNA
          Length = 2563

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 178 gccgcggcgcgggccacggc 197
           ||||||||||||||||||||
Sbjct: 285 gccgcggcgcgggccacggc 304
to top
>ref|XM_852646.1| PREDICTED: Canis familiaris similar to Polyadenylate-binding
           protein 4 (Poly(A)-binding protein 4) (PABP 4)
           (Inducible poly(A)-binding protein) (iPABP)
           (Activated-platelet protein-1) (APP-1), transcript
           variant 19 (LOC482464), mRNA
          Length = 2437

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 178 gccgcggcgcgggccacggc 197
           ||||||||||||||||||||
Sbjct: 285 gccgcggcgcgggccacggc 304
to top
>ref|XM_852075.1| PREDICTED: Canis familiaris similar to Polyadenylate-binding
           protein 4 (Poly(A)-binding protein 4) (PABP 4)
           (Inducible poly(A)-binding protein) (iPABP)
           (Activated-platelet protein-1) (APP-1), transcript
           variant 6 (LOC482464), mRNA
          Length = 2599

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 178 gccgcggcgcgggccacggc 197
           ||||||||||||||||||||
Sbjct: 285 gccgcggcgcgggccacggc 304
to top
>ref|XM_851990.1| PREDICTED: Canis familiaris similar to Polyadenylate-binding
           protein 4 (Poly(A)-binding protein 4) (PABP 4)
           (Inducible poly(A)-binding protein) (iPABP)
           (Activated-platelet protein-1) (APP-1), transcript
           variant 4 (LOC482464), mRNA
          Length = 1909

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 178 gccgcggcgcgggccacggc 197
           ||||||||||||||||||||
Sbjct: 285 gccgcggcgcgggccacggc 304
to top
>ref|XM_851907.1| PREDICTED: Canis familiaris similar to Polyadenylate-binding
           protein 4 (Poly(A)-binding protein 4) (PABP 4)
           (Inducible poly(A)-binding protein) (iPABP)
           (Activated-platelet protein-1) (APP-1), transcript
           variant 2 (LOC482464), mRNA
          Length = 2638

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 178 gccgcggcgcgggccacggc 197
           ||||||||||||||||||||
Sbjct: 285 gccgcggcgcgggccacggc 304
to top
>ref|XM_852603.1| PREDICTED: Canis familiaris similar to Polyadenylate-binding
           protein 4 (Poly(A)-binding protein 4) (PABP 4)
           (Inducible poly(A)-binding protein) (iPABP)
           (Activated-platelet protein-1) (APP-1), transcript
           variant 18 (LOC482464), mRNA
          Length = 2524

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 178 gccgcggcgcgggccacggc 197
           ||||||||||||||||||||
Sbjct: 285 gccgcggcgcgggccacggc 304
to top
>ref|XM_852563.1| PREDICTED: Canis familiaris similar to Polyadenylate-binding
           protein 4 (Poly(A)-binding protein 4) (PABP 4)
           (Inducible poly(A)-binding protein) (iPABP)
           (Activated-platelet protein-1) (APP-1), transcript
           variant 17 (LOC482464), mRNA
          Length = 2605

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 178 gccgcggcgcgggccacggc 197
           ||||||||||||||||||||
Sbjct: 285 gccgcggcgcgggccacggc 304
to top
>ref|XM_852524.1| PREDICTED: Canis familiaris similar to Polyadenylate-binding
           protein 4 (Poly(A)-binding protein 4) (PABP 4)
           (Inducible poly(A)-binding protein) (iPABP)
           (Activated-platelet protein-1) (APP-1), transcript
           variant 16 (LOC482464), mRNA
          Length = 2599

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 178 gccgcggcgcgggccacggc 197
           ||||||||||||||||||||
Sbjct: 285 gccgcggcgcgggccacggc 304
to top
>ref|XM_852486.1| PREDICTED: Canis familiaris similar to Polyadenylate-binding
           protein 4 (Poly(A)-binding protein 4) (PABP 4)
           (Inducible poly(A)-binding protein) (iPABP)
           (Activated-platelet protein-1) (APP-1), transcript
           variant 15 (LOC482464), mRNA
          Length = 2614

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 178 gccgcggcgcgggccacggc 197
           ||||||||||||||||||||
Sbjct: 285 gccgcggcgcgggccacggc 304
to top
>ref|XM_852446.1| PREDICTED: Canis familiaris similar to Polyadenylate-binding
           protein 4 (Poly(A)-binding protein 4) (PABP 4)
           (Inducible poly(A)-binding protein) (iPABP)
           (Activated-platelet protein-1) (APP-1), transcript
           variant 14 (LOC482464), mRNA
          Length = 2584

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 178 gccgcggcgcgggccacggc 197
           ||||||||||||||||||||
Sbjct: 285 gccgcggcgcgggccacggc 304
to top
>ref|XM_852406.1| PREDICTED: Canis familiaris similar to Polyadenylate-binding
           protein 4 (Poly(A)-binding protein 4) (PABP 4)
           (Inducible poly(A)-binding protein) (iPABP)
           (Activated-platelet protein-1) (APP-1), transcript
           variant 13 (LOC482464), mRNA
          Length = 2344

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 178 gccgcggcgcgggccacggc 197
           ||||||||||||||||||||
Sbjct: 285 gccgcggcgcgggccacggc 304
to top
>ref|XM_852365.1| PREDICTED: Canis familiaris similar to Polyadenylate-binding
           protein 4 (Poly(A)-binding protein 4) (PABP 4)
           (Inducible poly(A)-binding protein) (iPABP)
           (Activated-platelet protein-1) (APP-1), transcript
           variant 12 (LOC482464), mRNA
          Length = 2605

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 178 gccgcggcgcgggccacggc 197
           ||||||||||||||||||||
Sbjct: 285 gccgcggcgcgggccacggc 304
to top
>ref|XM_852327.1| PREDICTED: Canis familiaris similar to Polyadenylate-binding
           protein 4 (Poly(A)-binding protein 4) (PABP 4)
           (Inducible poly(A)-binding protein) (iPABP)
           (Activated-platelet protein-1) (APP-1), transcript
           variant 11 (LOC482464), mRNA
          Length = 2662

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 178 gccgcggcgcgggccacggc 197
           ||||||||||||||||||||
Sbjct: 285 gccgcggcgcgggccacggc 304
to top
>ref|XM_852281.1| PREDICTED: Canis familiaris similar to Polyadenylate-binding
           protein 4 (Poly(A)-binding protein 4) (PABP 4)
           (Inducible poly(A)-binding protein) (iPABP)
           (Activated-platelet protein-1) (APP-1), transcript
           variant 10 (LOC482464), mRNA
          Length = 2644

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 178 gccgcggcgcgggccacggc 197
           ||||||||||||||||||||
Sbjct: 285 gccgcggcgcgggccacggc 304
to top
>ref|XM_852244.1| PREDICTED: Canis familiaris similar to Polyadenylate-binding
           protein 4 (Poly(A)-binding protein 4) (PABP 4)
           (Inducible poly(A)-binding protein) (iPABP)
           (Activated-platelet protein-1) (APP-1), transcript
           variant 9 (LOC482464), mRNA
          Length = 2595

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 178 gccgcggcgcgggccacggc 197
           ||||||||||||||||||||
Sbjct: 285 gccgcggcgcgggccacggc 304
to top
>ref|XM_852203.1| PREDICTED: Canis familiaris similar to Polyadenylate-binding
           protein 4 (Poly(A)-binding protein 4) (PABP 4)
           (Inducible poly(A)-binding protein) (iPABP)
           (Activated-platelet protein-1) (APP-1), transcript
           variant 8 (LOC482464), mRNA
          Length = 2644

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 178 gccgcggcgcgggccacggc 197
           ||||||||||||||||||||
Sbjct: 285 gccgcggcgcgggccacggc 304
to top
>ref|XM_539581.2| PREDICTED: Canis familiaris similar to Polyadenylate-binding
           protein 4 (Poly(A)-binding protein 4) (PABP 4)
           (Inducible poly(A)-binding protein) (iPABP)
           (Activated-platelet protein-1) (APP-1), transcript
           variant 1 (LOC482464), mRNA
          Length = 2686

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 178 gccgcggcgcgggccacggc 197
           ||||||||||||||||||||
Sbjct: 285 gccgcggcgcgggccacggc 304
to top
>ref|XM_852122.1| PREDICTED: Canis familiaris similar to Polyadenylate-binding
           protein 4 (Poly(A)-binding protein 4) (PABP 4)
           (Inducible poly(A)-binding protein) (iPABP)
           (Activated-platelet protein-1) (APP-1), transcript
           variant 7 (LOC482464), mRNA
          Length = 2273

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 178 gccgcggcgcgggccacggc 197
           ||||||||||||||||||||
Sbjct: 285 gccgcggcgcgggccacggc 304
to top
>emb|CR956427.7| Pig DNA sequence from clone CH242-51O7 on chromosome 6, complete
            sequence
          Length = 187800

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 178  gccgcggcgcgggccacggc 197
            ||||||||||||||||||||
Sbjct: 9877 gccgcggcgcgggccacggc 9858
to top
>gb|CP000316.1| Polaromonas sp. JS666, complete genome
          Length = 5200264

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 173     tccaggccgcggcgcgggcc 192
               ||||||||||||||||||||
Sbjct: 3615845 tccaggccgcggcgcgggcc 3615864
to top
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence
          Length = 4074542

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 260     ggcgcggcggcatgggcggg 279
               ||||||||||||||||||||
Sbjct: 2741216 ggcgcggcggcatgggcggg 2741197
to top
>emb|AL939128.1|SCO939128 Streptomyces coelicolor A3(2) complete genome; segment 25/29
          Length = 296500

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 224    ccgccgatgaggccgcggcccggg 247
              ||||||| ||||||||||||||||
Sbjct: 103744 ccgccgaggaggccgcggcccggg 103767
to top
>gb|AC118675.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBb0094H06, from chromosome 3, complete sequence
          Length = 118075

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 176   aggccgcggcgcgggccacg 195
             ||||||||||||||||||||
Sbjct: 10360 aggccgcggcgcgggccacg 10379
to top
>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome
          Length = 2909809

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 173     tccaggccgcggcgcgggcc 192
               ||||||||||||||||||||
Sbjct: 2028685 tccaggccgcggcgcgggcc 2028704
to top
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 88      gcgctgcagctcatgtccgc 107
               ||||||||||||||||||||
Sbjct: 2029931 gcgctgcagctcatgtccgc 2029912
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 176      aggccgcggcgcgggccacg 195
                ||||||||||||||||||||
Sbjct: 12925912 aggccgcggcgcgggccacg 12925893
to top
>gb|AC134231.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone
            OSJNBa0006D11, complete sequence
          Length = 176637

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 176  aggccgcggcgcgggccacg 195
            ||||||||||||||||||||
Sbjct: 6847 aggccgcggcgcgggccacg 6828
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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 220     gagaccgccgatgaggccgcggcc 243
               ||||||||||| ||||||||||||
Sbjct: 1250921 gagaccgccgacgaggccgcggcc 1250944
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>dbj|AP003896.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1613_G04
          Length = 135357

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 88    gcgctgcagctcatgtccgc 107
             ||||||||||||||||||||
Sbjct: 23461 gcgctgcagctcatgtccgc 23442
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>dbj|AP005620.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0680F05
          Length = 185495

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 88     gcgctgcagctcatgtccgc 107
              ||||||||||||||||||||
Sbjct: 155129 gcgctgcagctcatgtccgc 155110
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>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence
          Length = 5888780

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 179     ccgcggcgcgggccacggcg 198
               ||||||||||||||||||||
Sbjct: 5788813 ccgcggcgcgggccacggcg 5788832
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>gb|AE015451.1| Pseudomonas putida KT2440 complete genome
          Length = 6181863

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 171    ggtccaggccgcggcgcggg 190
              ||||||||||||||||||||
Sbjct: 506123 ggtccaggccgcggcgcggg 506104
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>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence
          Length = 3809201

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 74      tgcgcacgctcgcggcgctgcagc 97
               ||||||||||||||| ||||||||
Sbjct: 2776366 tgcgcacgctcgcggggctgcagc 2776343



 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 260     ggcgcggcggcatgggcggg 279
               ||||||||||||||||||||
Sbjct: 2136340 ggcgcggcggcatgggcggg 2136359
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>gb|AC145927.3| Gallus gallus BAC clone CH261-29M22 from chromosome unknown, complete
              sequence
          Length = 227692

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 1      cagcagcagcaccaggtgct 20
              ||||||||||||||||||||
Sbjct: 189736 cagcagcagcaccaggtgct 189717
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>emb|CR956622.12| Pig DNA sequence from clone PigE-219N9 on chromosome 6, complete sequence
          Length = 174170

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 178    gccgcggcgcgggccacggc 197
              ||||||||||||||||||||
Sbjct: 119360 gccgcggcgcgggccacggc 119341


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,343,056
Number of Sequences: 3902068
Number of extensions: 2343056
Number of successful extensions: 55100
Number of sequences better than 10.0: 78
Number of HSP's better than 10.0 without gapping: 78
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 52747
Number of HSP's gapped (non-prelim): 2348
length of query: 312
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 290
effective length of database: 17,147,199,772
effective search space: 4972687933880
effective search space used: 4972687933880
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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