| Clone Name | bast78d12 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | CCMH_RHOCA (Q00501) Cytochrome c-type biogenesis protein ccl2 pr... | 30 | 2.3 | 2 | AL3B1_MOUSE (Q80VQ0) Aldehyde dehydrogenase 3B1 (EC 1.2.1.5) (Al... | 30 | 2.3 | 3 | L2GL_DROPS (Q08470) Protein lethal(2) giant larvae (P127) | 30 | 4.0 | 4 | COAT_BYDVN (P27578) Coat protein | 30 | 4.0 | 5 | NANH_MICVI (Q02834) Sialidase precursor (EC 3.2.1.18) (Neuramini... | 28 | 8.9 |
|---|
>CCMH_RHOCA (Q00501) Cytochrome c-type biogenesis protein ccl2 precursor| Length = 149 Score = 30.4 bits (67), Expect = 2.3 Identities = 26/69 (37%), Positives = 37/69 (53%) Frame = +2 Query: 173 RLASGDQLADVVYHEKGRVYCLTRYGDVHVLRLPERRRRKPIVVEDPAGPSEPVITLGSP 352 RL +GD A V+ + K R +G+ +VL PERR I+ GP+ V+ LG Sbjct: 68 RLVAGDSDAQVIDYIKDR------FGE-YVLFEPERRGANLILYW--IGPAVLVVALGGI 118 Query: 353 ALSLQGRRQ 379 L L+GRR+ Sbjct: 119 FLWLRGRRR 127
>AL3B1_MOUSE (Q80VQ0) Aldehyde dehydrogenase 3B1 (EC 1.2.1.5) (Aldehyde| dehydrogenase 7) Length = 468 Score = 30.4 bits (67), Expect = 2.3 Identities = 17/67 (25%), Positives = 33/67 (49%), Gaps = 2/67 (2%) Frame = +2 Query: 269 LPERRRRKPIVVEDPAGPSEPVITLGS--PALSLQGRRQRNLRMICYEHRRWREQQLPIA 442 L + + +P++ E+ GP P++T+ S A+ RR++ L + + R +Q+ Sbjct: 321 LVDVQETEPVMQEEIFGPILPLVTVRSLDEAIEFMNRREKPLALYAFSKRSQVIKQVLAR 380 Query: 443 TMKAAFC 463 T FC Sbjct: 381 TSSGGFC 387
>L2GL_DROPS (Q08470) Protein lethal(2) giant larvae (P127)| Length = 1166 Score = 29.6 bits (65), Expect = 4.0 Identities = 13/28 (46%), Positives = 19/28 (67%) Frame = +2 Query: 206 VYHEKGRVYCLTRYGDVHVLRLPERRRR 289 +YHE + CLT GD+ VL +PE +R+ Sbjct: 899 LYHEMALI-CLTNMGDIMVLSVPELKRQ 925
>COAT_BYDVN (P27578) Coat protein| Length = 204 Score = 29.6 bits (65), Expect = 4.0 Identities = 13/35 (37%), Positives = 22/35 (62%) Frame = +2 Query: 278 RRRRKPIVVEDPAGPSEPVITLGSPALSLQGRRQR 382 RRRR+ + PA ++PV+ + S + +GRR+R Sbjct: 14 RRRRQRVARRRPAARTQPVVVVASNGPARRGRRRR 48
>NANH_MICVI (Q02834) Sialidase precursor (EC 3.2.1.18) (Neuraminidase)| Length = 647 Score = 28.5 bits (62), Expect = 8.9 Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 4/62 (6%) Frame = +2 Query: 245 YGDVHVLR-LPERRRRKPIV---VEDPAGPSEPVITLGSPALSLQGRRQRNLRMICYEHR 412 YG V + R LP+ I+ + PAG + + L S A S R Q +RM C + + Sbjct: 296 YGPVTIDRDLPDPTNNASIIRAFPDAPAGSARAKVLLFSNAASQTSRSQGTIRMSCDDGQ 355 Query: 413 RW 418 W Sbjct: 356 TW 357 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 45,383,886 Number of Sequences: 219361 Number of extensions: 696193 Number of successful extensions: 1822 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 1795 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1821 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3014947676 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)