>HIRA_HUMAN (P54198) HIRA protein (TUP1-like enhancer of split protein 1)|
          Length = 1017

 Score = 33.1 bits (74), Expect = 0.38
 Identities = 26/70 (37%), Positives = 37/70 (52%), Gaps = 6/70 (8%)
 Frame = -1

Query: 469 SQVPL---LSGTMAETRAAPQLVTLMEKSPFLFLSS*NPTADFRAALALPAS---ARHSS 308
           + +PL   L+GTM  + ++PQL+ L   +P  F +S   T    AA A PA     + S 
Sbjct: 480 NSIPLSGSLAGTMLSSHSSPQLLPLDSSTPNSFGASKPCTEPVVAASARPAGDSVNKDSM 539

Query: 307 NATGRSAALA 278
           NAT   AAL+
Sbjct: 540 NATSTPAALS 549

>LRC24_HUMAN (Q50LG9) Leucine-rich repeat-containing protein 24 precursor|
          Length = 513

 Score = 32.0 bits (71), Expect = 0.85
 Identities = 21/45 (46%), Positives = 25/45 (55%)
 Frame = +1

Query: 304 RCCCALHWLAAPMLHGSQRSDSMNSRTRRGISPSRSPTGALPSSL 438
           RC CALHWL A +  G QR   + SR R+ I  +  P  AL S L
Sbjct: 207 RCDCALHWLGAWIKEGGQR--LLTSRDRK-IMCAEPPRLALQSLL 248

>NODQ_AZOBR (P28604) NodQ bifunctional enzyme (Nodulation protein Q) [Includes:|
           Sulfate adenylyltransferase subunit 1 (EC 2.7.7.4)
           (Sulfate adenylate transferase) (SAT) (ATP-sulfurylase
           large subunit); Adenylyl-sulfate kinase (EC 2.7.1.25)
           (APS kinase) (A
          Length = 620

 Score = 30.4 bits (67), Expect = 2.5
 Identities = 13/24 (54%), Positives = 16/24 (66%)
 Frame = -1

Query: 352 FRAALALPASARHSSNATGRSAAL 281
           FR+  A+P SARH  N   RSAA+
Sbjct: 178 FRSVTAIPLSARHGDNVVHRSAAM 201

>LRC24_MOUSE (Q8BHA1) Leucine-rich repeat-containing protein 24 precursor|
          Length = 521

 Score = 30.0 bits (66), Expect = 3.2
 Identities = 23/66 (34%), Positives = 34/66 (51%)
 Frame = +1

Query: 241 SAVQRPRATSQ*WPEQHFFLLRCCCALHWLAAPMLHGSQRSDSMNSRTRRGISPSRSPTG 420
           S++Q  R T   W        RC CALHWL + +  G +R   ++SR ++ I+ +  P  
Sbjct: 202 SSLQVLRLTENPW--------RCDCALHWLGSWIKEGGRR--LLSSRDKK-ITCAEPPRL 250

Query: 421 ALPSSL 438
           AL S L
Sbjct: 251 ALQSLL 256

>PURL_RHOPA (Q6N9F2) Phosphoribosylformylglycinamidine synthase II (EC 6.3.5.3)|
           (FGAM synthase II)
          Length = 736

 Score = 29.3 bits (64), Expect = 5.5
 Identities = 12/40 (30%), Positives = 21/40 (52%)
 Frame = -3

Query: 476 TTQPSALAIRHNGRDEGSAPVGDLDGEIPLLVLEFIESDR 357
           TT      ++H G+ +   P+ +L  E PL    ++ES+R
Sbjct: 346 TTPTKRFVVKHGGQVKADLPIKELGDEAPLYDRPWVESER 385

>FBPB_SERMA (P21409) Iron(III)-transport system permease protein sfuB|
          Length = 527

 Score = 28.9 bits (63), Expect = 7.2
 Identities = 25/62 (40%), Positives = 30/62 (48%), Gaps = 5/62 (8%)
 Frame = +1

Query: 298 LLRCCCALHWLAAPMLHGSQR-----SDSMNSRTRRGISPSRSPTGALPSSLPLCLIARA 462
           L+ CC  L  L A +  G  R     S S  S+T R +SP   P  AL   LP+ L A A
Sbjct: 243 LVLCCLGLLLLEA-ISRGRARYARVGSGSARSQTPRRLSP---PLAALALLLPIALTALA 298

Query: 463 LG 468
           LG
Sbjct: 299 LG 300

>DBP7_EMENI (Q5BGX6) ATP-dependent RNA helicase dbp7 (EC 3.6.1.-)|
          Length = 778

 Score = 28.5 bits (62), Expect = 9.4
 Identities = 15/47 (31%), Positives = 24/47 (51%)
 Frame = +1

Query: 298 LLRCCCALHWLAAPMLHGSQRSDSMNSRTRRGISPSRSPTGALPSSL 438
           LLRC    HW+ A  + G ++  S  +R R+G++   +  G L   L
Sbjct: 261 LLRCA---HWIVAGTVIGGEKKKSEKARLRKGLNILVATPGRLADHL 304

>DBP7_ASPOR (Q2UE66) ATP-dependent RNA helicase dbp7 (EC 3.6.1.-)|
          Length = 760

 Score = 28.5 bits (62), Expect = 9.4
 Identities = 15/47 (31%), Positives = 24/47 (51%)
 Frame = +1

Query: 298 LLRCCCALHWLAAPMLHGSQRSDSMNSRTRRGISPSRSPTGALPSSL 438
           LLRC    HW+ A  + G ++  S  +R R+G++   +  G L   L
Sbjct: 248 LLRCA---HWIVAGTVIGGEKKKSEKARLRKGLNILVATPGRLADHL 291

>DBP7_ASPFU (Q4WV71) ATP-dependent RNA helicase dbp7 (EC 3.6.1.-)|
          Length = 758

 Score = 28.5 bits (62), Expect = 9.4
 Identities = 15/47 (31%), Positives = 24/47 (51%)
 Frame = +1

Query: 298 LLRCCCALHWLAAPMLHGSQRSDSMNSRTRRGISPSRSPTGALPSSL 438
           LLRC    HW+ A  + G ++  S  +R R+G++   +  G L   L
Sbjct: 248 LLRCA---HWIVAGTVIGGEKKKSEKARLRKGLNILVATPGRLADHL 291

>COFD_NOCFA (Q5YQR9) LPPG:FO 2-phopspho-L-lactate transferase (EC 2.7.1.-)|
          Length = 332

 Score = 28.5 bits (62), Expect = 9.4
 Identities = 16/60 (26%), Positives = 29/60 (48%)
 Frame = -1

Query: 436 ETRAAPQLVTLMEKSPFLFLSS*NPTADFRAALALPASARHSSNATGRSAALAIIGLSHG 257
           E + AP ++ L+E +  + L+  NP     A LA+P      +  T R+  + + G+  G
Sbjct: 193 EAKPAPNVIDLIESADAVLLAPSNPVVSIGAILAVPGI--RGALRTTRAKVIGVSGVIDG 250

>5HTR_HELVI (Q25190) 5-hydroxytryptamine receptor (5-HT receptor) (Serotonin|
           receptor)
          Length = 466

 Score = 28.5 bits (62), Expect = 9.4
 Identities = 12/30 (40%), Positives = 20/30 (66%)
 Frame = +3

Query: 360 VGFYELKNKKGDFSIKVTNWGAALVSAIVP 449
           V +  ++N+K  F++ V  WGAALV ++ P
Sbjct: 167 VDYIHIRNEKRIFTMIVLVWGAALVVSLAP 196


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 47,055,907
Number of Sequences: 219361
Number of extensions: 743062
Number of successful extensions: 2391
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2357
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2391
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3188886965
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)