| Clone Name | bast78d08 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | UL35_HCMVA (P16766) Protein UL35 | 31 | 1.2 | 2 | LMO6_MOUSE (Q80VL3) LIM domain only protein 6 (Triple LIM domain... | 28 | 8.1 |
|---|
>UL35_HCMVA (P16766) Protein UL35| Length = 640 Score = 31.2 bits (69), Expect = 1.2 Identities = 14/27 (51%), Positives = 16/27 (59%) Frame = +1 Query: 250 AAASVHHRPHLQRRPVHPARRGPHHQR 330 + A HHR H +RR PA RGP H R Sbjct: 584 SVAYSHHRRHRRRRSPPPAPRGPAHTR 610
>LMO6_MOUSE (Q80VL3) LIM domain only protein 6 (Triple LIM domain protein 6)| Length = 624 Score = 28.5 bits (62), Expect = 8.1 Identities = 12/26 (46%), Positives = 13/26 (50%) Frame = +1 Query: 247 PAAASVHHRPHLQRRPVHPARRGPHH 324 P S HH H +RR RRG HH Sbjct: 505 PRTPSCHHHHHHRRRRQRHRRRGSHH 530 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 26,318,301 Number of Sequences: 219361 Number of extensions: 259761 Number of successful extensions: 1066 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 1049 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1065 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2735358828 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)