ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast78d01 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC112160.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1579_G03, complete sequence Length = 121466 Score = 381 bits (192), Expect = e-102 Identities = 259/280 (92%), Gaps = 1/280 (0%) Strand = Plus / Plus Query: 201 catgtcggagtcggtgctccgcaaggtgctcgtctcctactgctacgtcgcggtgtggat 260 ||||||||||||||||||||||||||||||| |||||||||||||||||| || ||||| Sbjct: 28749 catgtcggagtcggtgctccgcaaggtgctcctctcctactgctacgtcggcgtctggat 28808 Query: 261 cttcctctccttcaccgtcatcgtctacaacaagtacatcctcgaccccaagatgtacaa 320 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28809 cttcctctccttcgccgtcatcgtctacaacaagtacatcctcgaccccaagatgtacaa 28868 Query: 321 ctggcccttccccatctccctcaccatggtgcacatggccttctgctcctccctcgccgt 380 |||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 28869 ctggcccttcccgatctccctcaccatggtccacatggccttctgctcctccctcgccgt 28928 Query: 381 cgcgctcgtccgcgtcttccgcgtcgtcgacctcccctcctcgcccgccatgaccacgca 440 ||| ||||||||| || ||||||||||||| | ||||| ||||||||||||||| |||| Sbjct: 28929 cgccctcgtccgcctcctccgcgtcgtcgagccgccctcgtcgcccgccatgaccccgca 28988 Query: 441 gctctacaccagctccgtcctccccatc-gcgcgctctac 479 |||||||||| |||||| | |||||| ||||||||||| Sbjct: 28989 gctctacacctcctccgttgttcccatcggcgcgctctac 29028
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 381 bits (192), Expect = e-102 Identities = 259/280 (92%), Gaps = 1/280 (0%) Strand = Plus / Plus Query: 201 catgtcggagtcggtgctccgcaaggtgctcgtctcctactgctacgtcgcggtgtggat 260 ||||||||||||||||||||||||||||||| |||||||||||||||||| || ||||| Sbjct: 24142510 catgtcggagtcggtgctccgcaaggtgctcctctcctactgctacgtcggcgtctggat 24142569 Query: 261 cttcctctccttcaccgtcatcgtctacaacaagtacatcctcgaccccaagatgtacaa 320 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 24142570 cttcctctccttcgccgtcatcgtctacaacaagtacatcctcgaccccaagatgtacaa 24142629 Query: 321 ctggcccttccccatctccctcaccatggtgcacatggccttctgctcctccctcgccgt 380 |||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 24142630 ctggcccttcccgatctccctcaccatggtccacatggccttctgctcctccctcgccgt 24142689 Query: 381 cgcgctcgtccgcgtcttccgcgtcgtcgacctcccctcctcgcccgccatgaccacgca 440 ||| ||||||||| || ||||||||||||| | ||||| ||||||||||||||| |||| Sbjct: 24142690 cgccctcgtccgcctcctccgcgtcgtcgagccgccctcgtcgcccgccatgaccccgca 24142749 Query: 441 gctctacaccagctccgtcctccccatc-gcgcgctctac 479 |||||||||| |||||| | |||||| ||||||||||| Sbjct: 24142750 gctctacacctcctccgttgttcccatcggcgcgctctac 24142789
>dbj|AK059987.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-H01, full insert sequence Length = 1312 Score = 381 bits (192), Expect = e-102 Identities = 259/280 (92%), Gaps = 1/280 (0%) Strand = Plus / Plus Query: 201 catgtcggagtcggtgctccgcaaggtgctcgtctcctactgctacgtcgcggtgtggat 260 ||||||||||||||||||||||||||||||| |||||||||||||||||| || ||||| Sbjct: 117 catgtcggagtcggtgctccgcaaggtgctcctctcctactgctacgtcggcgtctggat 176 Query: 261 cttcctctccttcaccgtcatcgtctacaacaagtacatcctcgaccccaagatgtacaa 320 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 177 cttcctctccttcgccgtcatcgtctacaacaagtacatcctcgaccccaagatgtacaa 236 Query: 321 ctggcccttccccatctccctcaccatggtgcacatggccttctgctcctccctcgccgt 380 |||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 237 ctggcccttcccgatctccctcaccatggtccacatggccttctgctcctccctcgccgt 296 Query: 381 cgcgctcgtccgcgtcttccgcgtcgtcgacctcccctcctcgcccgccatgaccacgca 440 ||| ||||||||| || ||||||||||||| | ||||| ||||||||||||||| |||| Sbjct: 297 cgccctcgtccgcctcctccgcgtcgtcgagccgccctcgtcgcccgccatgaccccgca 356 Query: 441 gctctacaccagctccgtcctccccatc-gcgcgctctac 479 |||||||||| |||||| | |||||| ||||||||||| Sbjct: 357 gctctacacctcctccgttgttcccatcggcgcgctctac 396
>dbj|AK071846.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023120O09, full insert sequence Length = 1576 Score = 373 bits (188), Expect = e-100 Identities = 258/280 (92%), Gaps = 1/280 (0%) Strand = Plus / Plus Query: 201 catgtcggagtcggtgctccgcaaggtgctcgtctcctactgctacgtcgcggtgtggat 260 ||||||||||||||||||||||||||||||| |||||||||||||||||| || ||||| Sbjct: 127 catgtcggagtcggtgctccgcaaggtgctcctctcctactgctacgtcggcgtctggat 186 Query: 261 cttcctctccttcaccgtcatcgtctacaacaagtacatcctcgaccccaagatgtacaa 320 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 187 cttcctctccttcgccgtcatcgtctacaacaagtacatcctcgaccccaagatgtacaa 246 Query: 321 ctggcccttccccatctccctcaccatggtgcacatggccttctgctcctccctcgccgt 380 |||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 247 ctggcccttcccgatctccctcaccatggtccacatggccttctgctcctccctcgccgt 306 Query: 381 cgcgctcgtccgcgtcttccgcgtcgtcgacctcccctcctcgcccgccatgaccacgca 440 ||| ||||||||| || ||||||||| ||| | ||||| ||||||||||||||| |||| Sbjct: 307 cgccctcgtccgcctcctccgcgtcgccgagccgccctcgtcgcccgccatgaccccgca 366 Query: 441 gctctacaccagctccgtcctccccatc-gcgcgctctac 479 |||||||||| |||||| | |||||| ||||||||||| Sbjct: 367 gctctacacctcctccgttgttcccatcggcgcgctctac 406
>ref|NM_190949.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1086 Score = 357 bits (180), Expect = 2e-95 Identities = 268/296 (90%), Gaps = 1/296 (0%) Strand = Plus / Plus Query: 187 ggcggcgagggggccatgtcggagtcggtgctccgcaaggtgctcgtctcctactgctac 246 ||||||||||||| ||||||||| |||||| |||| |||||||| || || ||| ||| Sbjct: 34 ggcggcgaggggggcatgtcggattcggtgatccggaaggtgctggtgtcgtacatgtac 93 Query: 247 gtcgcggtgtggatcttcctctccttcaccgtcatcgtctacaacaagtacatcctcgac 306 || |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 94 gtggcggtgtggatcttcctctccttcacggtcatcgtctacaacaagtacatcctcgac 153 Query: 307 cccaagatgtacaactggcccttccccatctccctcaccatggtgcacatggccttctgc 366 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 154 cccaagatgtacaactggcccttccccatctcgctcaccatggtgcacatggccttctgc 213 Query: 367 tcctccctcgccgtcgcgctcgtccgcgtcttccgcgtcgtcgacctcccctcctcgccc 426 || ||||||||| |||||||||||||| || ||||||||||||| ||||| || || ||| Sbjct: 214 tcgtccctcgccatcgcgctcgtccgcctcctccgcgtcgtcgagctcccgtcgtccccc 273 Query: 427 gccatgaccacgcagctctacaccagctccgtcctccccatc-gcgcgctctactc 481 |||||||| |||||||||||||| ||| || ||||||||| ||||||||||||| Sbjct: 274 gccatgacgccgcagctctacacctcctcggtgctccccatcggcgcgctctactc 329
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 357 bits (180), Expect = 2e-95 Identities = 268/296 (90%), Gaps = 1/296 (0%) Strand = Plus / Minus Query: 187 ggcggcgagggggccatgtcggagtcggtgctccgcaaggtgctcgtctcctactgctac 246 ||||||||||||| ||||||||| |||||| |||| |||||||| || || ||| ||| Sbjct: 34012185 ggcggcgaggggggcatgtcggattcggtgatccggaaggtgctggtgtcgtacatgtac 34012126 Query: 247 gtcgcggtgtggatcttcctctccttcaccgtcatcgtctacaacaagtacatcctcgac 306 || |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 34012125 gtggcggtgtggatcttcctctccttcacggtcatcgtctacaacaagtacatcctcgac 34012066 Query: 307 cccaagatgtacaactggcccttccccatctccctcaccatggtgcacatggccttctgc 366 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 34012065 cccaagatgtacaactggcccttccccatctcgctcaccatggtgcacatggccttctgc 34012006 Query: 367 tcctccctcgccgtcgcgctcgtccgcgtcttccgcgtcgtcgacctcccctcctcgccc 426 || ||||||||| |||||||||||||| || ||||||||||||| ||||| || || ||| Sbjct: 34012005 tcgtccctcgccatcgcgctcgtccgcctcctccgcgtcgtcgagctcccgtcgtccccc 34011946 Query: 427 gccatgaccacgcagctctacaccagctccgtcctccccatc-gcgcgctctactc 481 |||||||| |||||||||||||| ||| || ||||||||| ||||||||||||| Sbjct: 34011945 gccatgacgccgcagctctacacctcctcggtgctccccatcggcgcgctctactc 34011890 Score = 40.1 bits (20), Expect = 6.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 171 catggcgaaggaggccggcggcgagggg 198 ||||| ||||||||||| |||||||||| Sbjct: 41200834 catggggaaggaggccgtcggcgagggg 41200807
>dbj|AP003232.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0034E02 Length = 165497 Score = 357 bits (180), Expect = 2e-95 Identities = 268/296 (90%), Gaps = 1/296 (0%) Strand = Plus / Minus Query: 187 ggcggcgagggggccatgtcggagtcggtgctccgcaaggtgctcgtctcctactgctac 246 ||||||||||||| ||||||||| |||||| |||| |||||||| || || ||| ||| Sbjct: 8663 ggcggcgaggggggcatgtcggattcggtgatccggaaggtgctggtgtcgtacatgtac 8604 Query: 247 gtcgcggtgtggatcttcctctccttcaccgtcatcgtctacaacaagtacatcctcgac 306 || |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 8603 gtggcggtgtggatcttcctctccttcacggtcatcgtctacaacaagtacatcctcgac 8544 Query: 307 cccaagatgtacaactggcccttccccatctccctcaccatggtgcacatggccttctgc 366 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 8543 cccaagatgtacaactggcccttccccatctcgctcaccatggtgcacatggccttctgc 8484 Query: 367 tcctccctcgccgtcgcgctcgtccgcgtcttccgcgtcgtcgacctcccctcctcgccc 426 || ||||||||| |||||||||||||| || ||||||||||||| ||||| || || ||| Sbjct: 8483 tcgtccctcgccatcgcgctcgtccgcctcctccgcgtcgtcgagctcccgtcgtccccc 8424 Query: 427 gccatgaccacgcagctctacaccagctccgtcctccccatc-gcgcgctctactc 481 |||||||| |||||||||||||| ||| || ||||||||| ||||||||||||| Sbjct: 8423 gccatgacgccgcagctctacacctcctcggtgctccccatcggcgcgctctactc 8368
>dbj|AP003221.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0003D09 Length = 161970 Score = 357 bits (180), Expect = 2e-95 Identities = 268/296 (90%), Gaps = 1/296 (0%) Strand = Plus / Minus Query: 187 ggcggcgagggggccatgtcggagtcggtgctccgcaaggtgctcgtctcctactgctac 246 ||||||||||||| ||||||||| |||||| |||| |||||||| || || ||| ||| Sbjct: 143628 ggcggcgaggggggcatgtcggattcggtgatccggaaggtgctggtgtcgtacatgtac 143569 Query: 247 gtcgcggtgtggatcttcctctccttcaccgtcatcgtctacaacaagtacatcctcgac 306 || |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 143568 gtggcggtgtggatcttcctctccttcacggtcatcgtctacaacaagtacatcctcgac 143509 Query: 307 cccaagatgtacaactggcccttccccatctccctcaccatggtgcacatggccttctgc 366 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 143508 cccaagatgtacaactggcccttccccatctcgctcaccatggtgcacatggccttctgc 143449 Query: 367 tcctccctcgccgtcgcgctcgtccgcgtcttccgcgtcgtcgacctcccctcctcgccc 426 || ||||||||| |||||||||||||| || ||||||||||||| ||||| || || ||| Sbjct: 143448 tcgtccctcgccatcgcgctcgtccgcctcctccgcgtcgtcgagctcccgtcgtccccc 143389 Query: 427 gccatgaccacgcagctctacaccagctccgtcctccccatc-gcgcgctctactc 481 |||||||| |||||||||||||| ||| || ||||||||| ||||||||||||| Sbjct: 143388 gccatgacgccgcagctctacacctcctcggtgctccccatcggcgcgctctactc 143333
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 170 bits (86), Expect = 3e-39 Identities = 119/130 (91%) Strand = Plus / Plus Query: 280 atcgtctacaacaagtacatcctcgaccccaagatgtacaactggcccttccccatctcc 339 ||||| ||||||||||||||||| || |||||||||||||||||||| |||||||||||| Sbjct: 1751087 atcgtgtacaacaagtacatccttgatcccaagatgtacaactggccattccccatctcc 1751146 Query: 340 ctcaccatggtgcacatggccttctgctcctccctcgccgtcgcgctcgtccgcgtcttc 399 ||||||||| | |||||||| |||||| ||||||||||||| | ||||||||||||| || Sbjct: 1751147 ctcaccatgatccacatggcgttctgcgcctccctcgccgtggtgctcgtccgcgtcctc 1751206 Query: 400 cgcgtcgtcg 409 |||||||||| Sbjct: 1751207 cgcgtcgtcg 1751216
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 170 bits (86), Expect = 3e-39 Identities = 119/130 (91%) Strand = Plus / Plus Query: 280 atcgtctacaacaagtacatcctcgaccccaagatgtacaactggcccttccccatctcc 339 ||||| ||||||||||||||||| || |||||||||||||||||||| |||||||||||| Sbjct: 1751064 atcgtgtacaacaagtacatccttgatcccaagatgtacaactggccattccccatctcc 1751123 Query: 340 ctcaccatggtgcacatggccttctgctcctccctcgccgtcgcgctcgtccgcgtcttc 399 ||||||||| | |||||||| |||||| ||||||||||||| | ||||||||||||| || Sbjct: 1751124 ctcaccatgatccacatggcgttctgcgcctccctcgccgtggtgctcgtccgcgtcctc 1751183 Query: 400 cgcgtcgtcg 409 |||||||||| Sbjct: 1751184 cgcgtcgtcg 1751193
>emb|BX000502.2|CNS08CDS Oryza sativa chromosome 12, . BAC OSJNBb0041E01 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 132026 Score = 170 bits (86), Expect = 3e-39 Identities = 119/130 (91%) Strand = Plus / Minus Query: 280 atcgtctacaacaagtacatcctcgaccccaagatgtacaactggcccttccccatctcc 339 ||||| ||||||||||||||||| || |||||||||||||||||||| |||||||||||| Sbjct: 89396 atcgtgtacaacaagtacatccttgatcccaagatgtacaactggccattccccatctcc 89337 Query: 340 ctcaccatggtgcacatggccttctgctcctccctcgccgtcgcgctcgtccgcgtcttc 399 ||||||||| | |||||||| |||||| ||||||||||||| | ||||||||||||| || Sbjct: 89336 ctcaccatgatccacatggcgttctgcgcctccctcgccgtggtgctcgtccgcgtcctc 89277 Query: 400 cgcgtcgtcg 409 |||||||||| Sbjct: 89276 cgcgtcgtcg 89267
>emb|BX000504.2|CNS08CDU Oryza sativa chromosome 12, . BAC OJ1239_F07 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 104307 Score = 170 bits (86), Expect = 3e-39 Identities = 119/130 (91%) Strand = Plus / Minus Query: 280 atcgtctacaacaagtacatcctcgaccccaagatgtacaactggcccttccccatctcc 339 ||||| ||||||||||||||||| || |||||||||||||||||||| |||||||||||| Sbjct: 15834 atcgtgtacaacaagtacatccttgatcccaagatgtacaactggccattccccatctcc 15775 Query: 340 ctcaccatggtgcacatggccttctgctcctccctcgccgtcgcgctcgtccgcgtcttc 399 ||||||||| | |||||||| |||||| ||||||||||||| | ||||||||||||| || Sbjct: 15774 ctcaccatgatccacatggcgttctgcgcctccctcgccgtggtgctcgtccgcgtcctc 15715 Query: 400 cgcgtcgtcg 409 |||||||||| Sbjct: 15714 cgcgtcgtcg 15705
>gb|AC123527.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0068G15, complete sequence Length = 146175 Score = 163 bits (82), Expect = 7e-37 Identities = 118/130 (90%) Strand = Plus / Plus Query: 280 atcgtctacaacaagtacatcctcgaccccaagatgtacaactggcccttccccatctcc 339 ||||| ||||||||||||||||| || |||||||||||||||||||| |||||||||||| Sbjct: 29847 atcgtgtacaacaagtacatccttgatcccaagatgtacaactggccattccccatctcc 29906 Query: 340 ctcaccatggtgcacatggccttctgctcctccctcgccgtcgcgctcgtccgcgtcttc 399 ||||||||| | |||||||| |||||| ||||||||||||| | |||||| |||||| || Sbjct: 29907 ctcaccatgatccacatggcgttctgcgcctccctcgccgtggtgctcgttcgcgtcctc 29966 Query: 400 cgcgtcgtcg 409 |||||||||| Sbjct: 29967 cgcgtcgtcg 29976
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 163 bits (82), Expect = 7e-37 Identities = 118/130 (90%) Strand = Plus / Plus Query: 280 atcgtctacaacaagtacatcctcgaccccaagatgtacaactggcccttccccatctcc 339 ||||| ||||||||||||||||| || |||||||||||||||||||| |||||||||||| Sbjct: 1812017 atcgtgtacaacaagtacatccttgatcccaagatgtacaactggccattccccatctcc 1812076 Query: 340 ctcaccatggtgcacatggccttctgctcctccctcgccgtcgcgctcgtccgcgtcttc 399 ||||||||| | |||||||| |||||| ||||||||||||| | |||||| |||||| || Sbjct: 1812077 ctcaccatgatccacatggcgttctgcgcctccctcgccgtggtgctcgttcgcgtcctc 1812136 Query: 400 cgcgtcgtcg 409 |||||||||| Sbjct: 1812137 cgcgtcgtcg 1812146
>dbj|AK107562.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-130-B12, full insert sequence Length = 1589 Score = 163 bits (82), Expect = 7e-37 Identities = 118/130 (90%) Strand = Plus / Plus Query: 280 atcgtctacaacaagtacatcctcgaccccaagatgtacaactggcccttccccatctcc 339 ||||| ||||||||||||||||| || |||||||||||||||||||| |||||||||||| Sbjct: 278 atcgtgtacaacaagtacatccttgatcccaagatgtacaactggccattccccatctcc 337 Query: 340 ctcaccatggtgcacatggccttctgctcctccctcgccgtcgcgctcgtccgcgtcttc 399 ||||||||| | |||||||| |||||| ||||||||||||| | |||||| |||||| || Sbjct: 338 ctcaccatgatccacatggcgttctgcgcctccctcgccgtggtgctcgttcgcgtcctc 397 Query: 400 cgcgtcgtcg 409 |||||||||| Sbjct: 398 cgcgtcgtcg 407
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 163 bits (82), Expect = 7e-37 Identities = 118/130 (90%) Strand = Plus / Plus Query: 280 atcgtctacaacaagtacatcctcgaccccaagatgtacaactggcccttccccatctcc 339 ||||| ||||||||||||||||| || |||||||||||||||||||| |||||||||||| Sbjct: 1809738 atcgtgtacaacaagtacatccttgatcccaagatgtacaactggccattccccatctcc 1809797 Query: 340 ctcaccatggtgcacatggccttctgctcctccctcgccgtcgcgctcgtccgcgtcttc 399 ||||||||| | |||||||| |||||| ||||||||||||| | |||||| |||||| || Sbjct: 1809798 ctcaccatgatccacatggcgttctgcgcctccctcgccgtggtgctcgttcgcgtcctc 1809857 Query: 400 cgcgtcgtcg 409 |||||||||| Sbjct: 1809858 cgcgtcgtcg 1809867
>ref|NM_119391.1| Arabidopsis thaliana organic anion transporter AT4G32390 mRNA, complete cds Length = 1053 Score = 121 bits (61), Expect = 2e-24 Identities = 127/149 (85%) Strand = Plus / Plus Query: 233 tctcctactgctacgtcgcggtgtggatcttcctctccttcaccgtcatcgtctacaaca 292 |||||||| |||||||||| | ||||||||||| ||||||||||||||||||||||| Sbjct: 50 tctcctacacctacgtcgcgatctggatcttcctgagcttcaccgtcatcgtctacaaca 109 Query: 293 agtacatcctcgaccccaagatgtacaactggcccttccccatctccctcaccatggtgc 352 | |||||||||||| ||||||||||| ||||| || || ||| | ||||||||| | | Sbjct: 110 aatacatcctcgacaagaagatgtacaattggccttttccgatcacactcaccatgatcc 169 Query: 353 acatggccttctgctcctccctcgccgtc 381 ||||||| || ||||| |||||||||||| Sbjct: 170 acatggctttttgctcttccctcgccgtc 198
>emb|AL161581.2|ATCHRIV77 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 77 Length = 197252 Score = 121 bits (61), Expect = 2e-24 Identities = 127/149 (85%) Strand = Plus / Plus Query: 233 tctcctactgctacgtcgcggtgtggatcttcctctccttcaccgtcatcgtctacaaca 292 |||||||| |||||||||| | ||||||||||| ||||||||||||||||||||||| Sbjct: 50608 tctcctacacctacgtcgcgatctggatcttcctgagcttcaccgtcatcgtctacaaca 50667 Query: 293 agtacatcctcgaccccaagatgtacaactggcccttccccatctccctcaccatggtgc 352 | |||||||||||| ||||||||||| ||||| || || ||| | ||||||||| | | Sbjct: 50668 aatacatcctcgacaagaagatgtacaattggccttttccgatcacactcaccatgatcc 50727 Query: 353 acatggccttctgctcctccctcgccgtc 381 ||||||| || ||||| |||||||||||| Sbjct: 50728 acatggctttttgctcttccctcgccgtc 50756
>emb|AL034567.1|ATF8B4 Arabidopsis thaliana DNA chromosome 4, BAC clone F8B4 (ESSA project) Length = 93257 Score = 121 bits (61), Expect = 2e-24 Identities = 127/149 (85%) Strand = Plus / Plus Query: 233 tctcctactgctacgtcgcggtgtggatcttcctctccttcaccgtcatcgtctacaaca 292 |||||||| |||||||||| | ||||||||||| ||||||||||||||||||||||| Sbjct: 36891 tctcctacacctacgtcgcgatctggatcttcctgagcttcaccgtcatcgtctacaaca 36950 Query: 293 agtacatcctcgaccccaagatgtacaactggcccttccccatctccctcaccatggtgc 352 | |||||||||||| ||||||||||| ||||| || || ||| | ||||||||| | | Sbjct: 36951 aatacatcctcgacaagaagatgtacaattggccttttccgatcacactcaccatgatcc 37010 Query: 353 acatggccttctgctcctccctcgccgtc 381 ||||||| || ||||| |||||||||||| Sbjct: 37011 acatggctttttgctcttccctcgccgtc 37039
>ref|NM_197083.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBa0029C15.18), mRNA Length = 1005 Score = 119 bits (60), Expect = 9e-24 Identities = 108/124 (87%) Strand = Plus / Plus Query: 286 tacaacaagtacatcctcgaccccaagatgtacaactggcccttccccatctccctcacc 345 |||||||||||||||||||| |||| ||||||||||||||| |||||||| || |||||| Sbjct: 358 tacaacaagtacatcctcgatcccacgatgtacaactggccattccccatatcgctcacc 417 Query: 346 atggtgcacatggccttctgctcctccctcgccgtcgcgctcgtccgcgtcttccgcgtc 405 ||||| ||||||| || ||| | |||||||| || | ||||||||||||| ||||||| Sbjct: 418 atggtccacatggtgttttgcgcttccctcgctgtggtgctcgtccgcgtcctccgcgtt 477 Query: 406 gtcg 409 |||| Sbjct: 478 gtcg 481
>gb|AC087182.12| Oryza sativa chromosome 10 BAC OSJNBa0029C15 genomic sequence, complete sequence Length = 148816 Score = 119 bits (60), Expect = 9e-24 Identities = 108/124 (87%) Strand = Plus / Minus Query: 286 tacaacaagtacatcctcgaccccaagatgtacaactggcccttccccatctccctcacc 345 |||||||||||||||||||| |||| ||||||||||||||| |||||||| || |||||| Sbjct: 44647 tacaacaagtacatcctcgatcccacgatgtacaactggccattccccatatcgctcacc 44588 Query: 346 atggtgcacatggccttctgctcctccctcgccgtcgcgctcgtccgcgtcttccgcgtc 405 ||||| ||||||| || ||| | |||||||| || | ||||||||||||| ||||||| Sbjct: 44587 atggtccacatggtgttttgcgcttccctcgctgtggtgctcgtccgcgtcctccgcgtt 44528 Query: 406 gtcg 409 |||| Sbjct: 44527 gtcg 44524
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 119 bits (60), Expect = 9e-24 Identities = 108/124 (87%) Strand = Plus / Plus Query: 286 tacaacaagtacatcctcgaccccaagatgtacaactggcccttccccatctccctcacc 345 |||||||||||||||||||| |||| ||||||||||||||| |||||||| || |||||| Sbjct: 17887394 tacaacaagtacatcctcgatcccacgatgtacaactggccattccccatatcgctcacc 17887453 Query: 346 atggtgcacatggccttctgctcctccctcgccgtcgcgctcgtccgcgtcttccgcgtc 405 ||||| ||||||| || ||| | |||||||| || | ||||||||||||| ||||||| Sbjct: 17887454 atggtccacatggtgttttgcgcttccctcgctgtggtgctcgtccgcgtcctccgcgtt 17887513 Query: 406 gtcg 409 |||| Sbjct: 17887514 gtcg 17887517 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 177 gaaggaggccggcggcgagg 196 |||||||||||||||||||| Sbjct: 12988385 gaaggaggccggcggcgagg 12988404
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 119 bits (60), Expect = 9e-24 Identities = 108/124 (87%) Strand = Plus / Plus Query: 286 tacaacaagtacatcctcgaccccaagatgtacaactggcccttccccatctccctcacc 345 |||||||||||||||||||| |||| ||||||||||||||| |||||||| || |||||| Sbjct: 17896647 tacaacaagtacatcctcgatcccacgatgtacaactggccattccccatatcgctcacc 17896706 Query: 346 atggtgcacatggccttctgctcctccctcgccgtcgcgctcgtccgcgtcttccgcgtc 405 ||||| ||||||| || ||| | |||||||| || | ||||||||||||| ||||||| Sbjct: 17896707 atggtccacatggtgttttgcgcttccctcgctgtggtgctcgtccgcgtcctccgcgtt 17896766 Query: 406 gtcg 409 |||| Sbjct: 17896767 gtcg 17896770 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 177 gaaggaggccggcggcgagg 196 |||||||||||||||||||| Sbjct: 12995725 gaaggaggccggcggcgagg 12995744
>ref|XM_463210.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1110 Score = 103 bits (52), Expect = 5e-19 Identities = 106/124 (85%) Strand = Plus / Plus Query: 286 tacaacaagtacatcctcgaccccaagatgtacaactggcccttccccatctccctcacc 345 |||||||||||||||||| | |||| ||||||||||||||| |||||| | || |||||| Sbjct: 520 tacaacaagtacatcctcaatcccacgatgtacaactggccattccccgtatcgctcacc 579 Query: 346 atggtgcacatggccttctgctcctccctcgccgtcgcgctcgtccgcgtcttccgcgtc 405 ||||| |||| ||| || ||| |||||||| | || | |||| |||||||| |||||||| Sbjct: 580 atggtccacacggcgttttgcgcctccctcactgtggtgctcatccgcgtcctccgcgtc 639 Query: 406 gtcg 409 |||| Sbjct: 640 gtcg 643
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 103 bits (52), Expect = 5e-19 Identities = 106/124 (85%) Strand = Plus / Plus Query: 286 tacaacaagtacatcctcgaccccaagatgtacaactggcccttccccatctccctcacc 345 |||||||||||||||||| | |||| ||||||||||||||| |||||| | || |||||| Sbjct: 23444341 tacaacaagtacatcctcaatcccacgatgtacaactggccattccccgtatcgctcacc 23444400 Query: 346 atggtgcacatggccttctgctcctccctcgccgtcgcgctcgtccgcgtcttccgcgtc 405 ||||| |||| ||| || ||| |||||||| | || | |||| |||||||| |||||||| Sbjct: 23444401 atggtccacacggcgttttgcgcctccctcactgtggtgctcatccgcgtcctccgcgtc 23444460 Query: 406 gtcg 409 |||| Sbjct: 23444461 gtcg 23444464 Score = 40.1 bits (20), Expect = 6.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 173 tggcgaaggaggccggcggcgagggggc 200 |||||| |||||||||||||| |||||| Sbjct: 4477373 tggcgacggaggccggcggcgtgggggc 4477400
>gb|AC092780.6| Oryza sativa chromosome 3 BAC OSJNBb0079B16 genomic sequence, complete sequence Length = 144383 Score = 103 bits (52), Expect = 5e-19 Identities = 106/124 (85%) Strand = Plus / Minus Query: 286 tacaacaagtacatcctcgaccccaagatgtacaactggcccttccccatctccctcacc 345 |||||||||||||||||| | |||| ||||||||||||||| |||||| | || |||||| Sbjct: 137916 tacaacaagtacatcctcaatcccacgatgtacaactggccattccccgtatcgctcacc 137857 Query: 346 atggtgcacatggccttctgctcctccctcgccgtcgcgctcgtccgcgtcttccgcgtc 405 ||||| |||| ||| || ||| |||||||| | || | |||| |||||||| |||||||| Sbjct: 137856 atggtccacacggcgttttgcgcctccctcactgtggtgctcatccgcgtcctccgcgtc 137797 Query: 406 gtcg 409 |||| Sbjct: 137796 gtcg 137793
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 103 bits (52), Expect = 5e-19 Identities = 106/124 (85%) Strand = Plus / Plus Query: 286 tacaacaagtacatcctcgaccccaagatgtacaactggcccttccccatctccctcacc 345 |||||||||||||||||| | |||| ||||||||||||||| |||||| | || |||||| Sbjct: 23437369 tacaacaagtacatcctcaatcccacgatgtacaactggccattccccgtatcgctcacc 23437428 Query: 346 atggtgcacatggccttctgctcctccctcgccgtcgcgctcgtccgcgtcttccgcgtc 405 ||||| |||| ||| || ||| |||||||| | || | |||| |||||||| |||||||| Sbjct: 23437429 atggtccacacggcgttttgcgcctccctcactgtggtgctcatccgcgtcctccgcgtc 23437488 Query: 406 gtcg 409 |||| Sbjct: 23437489 gtcg 23437492 Score = 40.1 bits (20), Expect = 6.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 173 tggcgaaggaggccggcggcgagggggc 200 |||||| |||||||||||||| |||||| Sbjct: 4477488 tggcgacggaggccggcggcgtgggggc 4477515
>gb|AC097280.8| Oryza sativa chromosome 3 BAC OSJNBb0111B07 genomic sequence, complete sequence Length = 129647 Score = 103 bits (52), Expect = 5e-19 Identities = 106/124 (85%) Strand = Plus / Plus Query: 286 tacaacaagtacatcctcgaccccaagatgtacaactggcccttccccatctccctcacc 345 |||||||||||||||||| | |||| ||||||||||||||| |||||| | || |||||| Sbjct: 126997 tacaacaagtacatcctcaatcccacgatgtacaactggccattccccgtatcgctcacc 127056 Query: 346 atggtgcacatggccttctgctcctccctcgccgtcgcgctcgtccgcgtcttccgcgtc 405 ||||| |||| ||| || ||| |||||||| | || | |||| |||||||| |||||||| Sbjct: 127057 atggtccacacggcgttttgcgcctccctcactgtggtgctcatccgcgtcctccgcgtc 127116 Query: 406 gtcg 409 |||| Sbjct: 127117 gtcg 127120
>dbj|AB190773.1| Mesembryanthemum crystallinum PTL1 mRNA for plastidic phosphate translocator-like protein1, complete cds Length = 1661 Score = 91.7 bits (46), Expect = 2e-15 Identities = 76/86 (88%) Strand = Plus / Plus Query: 247 gtcgcggtgtggatcttcctctccttcaccgtcatcgtctacaacaagtacatcctcgac 306 |||||| | |||||||||||| |||||| |||||||| |||||||||||||||||||| Sbjct: 242 gtcgcgatatggatcttcctcagcttcactgtcatcgtttacaacaagtacatcctcgat 301 Query: 307 cccaagatgtacaactggcccttccc 332 | ||||||||||| ||||||||||| Sbjct: 302 cgtaagatgtacaattggcccttccc 327
>ref|NM_122449.1| Arabidopsis thaliana organic anion transporter AT5G25400 mRNA, complete cds Length = 1050 Score = 81.8 bits (41), Expect = 2e-12 Identities = 95/113 (84%) Strand = Plus / Plus Query: 256 tggatcttcctctccttcaccgtcatcgtctacaacaagtacatcctcgaccccaagatg 315 ||||||||||| |||||||||||||||||||||||| || ||||||||| |||||| Sbjct: 73 tggatcttcctaagcttcaccgtcatcgtctacaacaaatatatcctcgacaagaagatg 132 Query: 316 tacaactggcccttccccatctccctcaccatggtgcacatggccttctgctc 368 ||| | ||||| ||||| ||||| ||||| ||| | |||||| |||| ||||| Sbjct: 133 tacgattggccattcccgatctcactcacaatgatccacatgtccttttgctc 185
>gb|AC006258.1| Arabidopsis thaliana BAC F18G18 from chromosome V near 60.5 cM, complete sequence Length = 110469 Score = 81.8 bits (41), Expect = 2e-12 Identities = 95/113 (84%) Strand = Plus / Plus Query: 256 tggatcttcctctccttcaccgtcatcgtctacaacaagtacatcctcgaccccaagatg 315 ||||||||||| |||||||||||||||||||||||| || ||||||||| |||||| Sbjct: 65424 tggatcttcctaagcttcaccgtcatcgtctacaacaaatatatcctcgacaagaagatg 65483 Query: 316 tacaactggcccttccccatctccctcaccatggtgcacatggccttctgctc 368 ||| | ||||| ||||| ||||| ||||| ||| | |||||| |||| ||||| Sbjct: 65484 tacgattggccattcccgatctcactcacaatgatccacatgtccttttgctc 65536
>ref|NM_128109.2| Arabidopsis thaliana organic anion transporter AT2G25520 mRNA, complete cds Length = 1530 Score = 77.8 bits (39), Expect = 3e-11 Identities = 87/103 (84%) Strand = Plus / Plus Query: 256 tggatcttcctctccttcaccgtcatcgtctacaacaagtacatcctcgaccccaagatg 315 |||||||||||| |||||| ||||||||||||||||| |||||||||||| |||||| Sbjct: 195 tggatcttcctcagcttcacagtcatcgtctacaacaaatacatcctcgacaagaagatg 254 Query: 316 tacaactggcccttccccatctccctcaccatggtgcacatgg 358 || || ||||| ||||| || | ||||||||| | ||||||| Sbjct: 255 tataattggccattcccaataactctcaccatgatccacatgg 297
>gb|AY056179.1| Arabidopsis thaliana putative phosphate/phosphoenolpyruvate translocator protein (At2g25520) mRNA, complete cds Length = 1547 Score = 77.8 bits (39), Expect = 3e-11 Identities = 87/103 (84%) Strand = Plus / Plus Query: 256 tggatcttcctctccttcaccgtcatcgtctacaacaagtacatcctcgaccccaagatg 315 |||||||||||| |||||| ||||||||||||||||| |||||||||||| |||||| Sbjct: 195 tggatcttcctcagcttcacagtcatcgtctacaacaaatacatcctcgacaagaagatg 254 Query: 316 tacaactggcccttccccatctccctcaccatggtgcacatgg 358 || || ||||| ||||| || | ||||||||| | ||||||| Sbjct: 255 tataattggccattcccaataactctcaccatgatccacatgg 297
>gb|AC006300.4| Arabidopsis thaliana chromosome 2 clone F13B15 map mi238, complete sequence Length = 88770 Score = 77.8 bits (39), Expect = 3e-11 Identities = 87/103 (84%) Strand = Plus / Plus Query: 256 tggatcttcctctccttcaccgtcatcgtctacaacaagtacatcctcgaccccaagatg 315 |||||||||||| |||||| ||||||||||||||||| |||||||||||| |||||| Sbjct: 60238 tggatcttcctcagcttcacagtcatcgtctacaacaaatacatcctcgacaagaagatg 60297 Query: 316 tacaactggcccttccccatctccctcaccatggtgcacatgg 358 || || ||||| ||||| || | ||||||||| | ||||||| Sbjct: 60298 tataattggccattcccaataactctcaccatgatccacatgg 60340
>gb|AY054267.1| Arabidopsis thaliana At2g25520/F13B15.18 mRNA, complete cds Length = 1489 Score = 77.8 bits (39), Expect = 3e-11 Identities = 87/103 (84%) Strand = Plus / Plus Query: 256 tggatcttcctctccttcaccgtcatcgtctacaacaagtacatcctcgaccccaagatg 315 |||||||||||| |||||| ||||||||||||||||| |||||||||||| |||||| Sbjct: 195 tggatcttcctcagcttcacagtcatcgtctacaacaaatacatcctcgacaagaagatg 254 Query: 316 tacaactggcccttccccatctccctcaccatggtgcacatgg 358 || || ||||| ||||| || | ||||||||| | ||||||| Sbjct: 255 tataattggccattcccaataactctcaccatgatccacatgg 297
>gb|BT002645.1| Arabidopsis thaliana At2g25520/F13B15.18 gene, complete cds Length = 1044 Score = 77.8 bits (39), Expect = 3e-11 Identities = 87/103 (84%) Strand = Plus / Plus Query: 256 tggatcttcctctccttcaccgtcatcgtctacaacaagtacatcctcgaccccaagatg 315 |||||||||||| |||||| ||||||||||||||||| |||||||||||| |||||| Sbjct: 73 tggatcttcctcagcttcacagtcatcgtctacaacaaatacatcctcgacaagaagatg 132 Query: 316 tacaactggcccttccccatctccctcaccatggtgcacatgg 358 || || ||||| ||||| || | ||||||||| | ||||||| Sbjct: 133 tataattggccattcccaataactctcaccatgatccacatgg 175
>ref|NM_121161.1| Arabidopsis thaliana organic anion transporter AT5G11230 mRNA, complete cds Length = 1056 Score = 67.9 bits (34), Expect = 3e-08 Identities = 106/130 (81%) Strand = Plus / Plus Query: 233 tctcctactgctacgtcgcggtgtggatcttcctctccttcaccgtcatcgtctacaaca 292 |||| ||| ||||||| ||| | ||||||||| | |||||| || || |||||||||| Sbjct: 50 tctcatacagctacgtagcgatatggatcttcttaagcttcacagtaattgtctacaaca 109 Query: 293 agtacatcctcgaccccaagatgtacaactggcccttccccatctccctcaccatggtgc 352 | |||||||||||| ||||||||||| ||||| ||||| ||||| ||||| ||| | | Sbjct: 110 aatacatcctcgacaagaagatgtacaattggccattcccgatctcactcacaatgatcc 169 Query: 353 acatggcctt 362 ||||| |||| Sbjct: 170 acatgtcctt 179
>emb|AL360314.1|ATF2I11 Arabidopsis thaliana DNA chromosome 5, BAC clone F2I11 (ESSA project) Length = 110992 Score = 67.9 bits (34), Expect = 3e-08 Identities = 106/130 (81%) Strand = Plus / Plus Query: 233 tctcctactgctacgtcgcggtgtggatcttcctctccttcaccgtcatcgtctacaaca 292 |||| ||| ||||||| ||| | ||||||||| | |||||| || || |||||||||| Sbjct: 43372 tctcatacagctacgtagcgatatggatcttcttaagcttcacagtaattgtctacaaca 43431 Query: 293 agtacatcctcgaccccaagatgtacaactggcccttccccatctccctcaccatggtgc 352 | |||||||||||| ||||||||||| ||||| ||||| ||||| ||||| ||| | | Sbjct: 43432 aatacatcctcgacaagaagatgtacaattggccattcccgatctcactcacaatgatcc 43491 Query: 353 acatggcctt 362 ||||| |||| Sbjct: 43492 acatgtcctt 43501
>gb|BT013372.1| Lycopersicon esculentum clone 135397F, mRNA sequence Length = 1426 Score = 50.1 bits (25), Expect = 0.007 Identities = 49/57 (85%) Strand = Plus / Plus Query: 256 tggatcttcctctccttcaccgtcatcgtctacaacaagtacatcctcgaccccaag 312 |||||||||||||| ||||| ||||| || |||||||| ||||| || |||| |||| Sbjct: 154 tggatcttcctctctttcactgtcattgtttacaacaaatacattcttgaccgcaag 210
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 389 tccgcgtcttccgcgtcgtcgac 411 ||||||||||||||||||||||| Sbjct: 2590007 tccgcgtcttccgcgtcgtcgac 2590029
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 389 tccgcgtcttccgcgtcgtcgac 411 ||||||||||||||||||||||| Sbjct: 770049 tccgcgtcttccgcgtcgtcgac 770071
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 389 tccgcgtcttccgcgtcgtcgac 411 ||||||||||||||||||||||| Sbjct: 500832 tccgcgtcttccgcgtcgtcgac 500854
>gb|AC150787.15| Medicago truncatula clone mth2-171n13, complete sequence Length = 82665 Score = 44.1 bits (22), Expect = 0.42 Identities = 70/86 (81%) Strand = Plus / Plus Query: 256 tggatcttcctctccttcaccgtcatcgtctacaacaagtacatcctcgaccccaagatg 315 ||||||||| | || ||||| || ||||| |||||||| |||||| | ||| |||||| Sbjct: 34224 tggatcttcttatcattcactgttatcgtttacaacaaatacatcttagacaaaaagatg 34283 Query: 316 tacaactggcccttccccatctccct 341 ||||| ||||| ||||| || ||||| Sbjct: 34284 tacaattggccattcccaatttccct 34309
>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome Length = 3561584 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 228 gctcgtctcctactgctacgtcgcg 252 ||||||||||||| ||||||||||| Sbjct: 3244844 gctcgtctcctaccgctacgtcgcg 3244868
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 363 ctgctcctccctcgccgtcgc 383 ||||||||||||||||||||| Sbjct: 17742940 ctgctcctccctcgccgtcgc 17742920
>dbj|AP005399.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0676H02 Length = 144252 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 363 ctgctcctccctcgccgtcgc 383 ||||||||||||||||||||| Sbjct: 51574 ctgctcctccctcgccgtcgc 51554
>ref|NM_196376.1| Oryza sativa (japonica cultivar-group) putative selenium-binding protein-like (OSJNBa0050N08.17), mRNA Length = 1956 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 177 gaaggaggccggcggcgagg 196 |||||||||||||||||||| Sbjct: 118 gaaggaggccggcggcgagg 99
>gb|BT017565.1| Zea mays clone EL01N0425H11.c mRNA sequence Length = 922 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 206 cggagtcggtgctccgcaag 225 |||||||||||||||||||| Sbjct: 27 cggagtcggtgctccgcaag 46
>gb|AC021891.6| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0050N08, complete sequence Length = 144593 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 177 gaaggaggccggcggcgagg 196 |||||||||||||||||||| Sbjct: 87301 gaaggaggccggcggcgagg 87320
>ref|XM_362482.1| Magnaporthe grisea 70-15 hypothetical protein (MG08065.4) partial mRNA Length = 1455 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 425 ccgccatgaccacgcagctc 444 |||||||||||||||||||| Sbjct: 1085 ccgccatgaccacgcagctc 1066
>gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome Length = 3814139 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 327 cttccccatctccctcacca 346 |||||||||||||||||||| Sbjct: 877221 cttccccatctccctcacca 877240
>gb|CP000353.1| Ralstonia metallidurans CH34 megaplasmid, complete sequence Length = 2580084 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 421 tcgcccgccatgaccacgca 440 |||||||||||||||||||| Sbjct: 1629394 tcgcccgccatgaccacgca 1629413
>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome Length = 3928089 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 390 ccgcgtcttccgcgtcgtcgacct 413 |||||||||||||| ||||||||| Sbjct: 1214093 ccgcgtcttccgcgccgtcgacct 1214070
>emb|CR812477.10| Human DNA sequence from clone XXyac-25IG7 on chromosome 1, complete sequence Length = 31273 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 326 ccttccccatctccctcaccatgg 349 ||||||||||||||||| |||||| Sbjct: 28117 ccttccccatctccctcgccatgg 28140
>emb|AL672032.6| Human DNA sequence from clone RP11-308B5 on chromosome X Contains a novel gene, the 5' end of the PLAC1 gene for placenta-specific 1, a ribosomal protein L21 (RPL21) pseudogene, a ribosomal protein S7 (RPS7) pseudogene and the 3' end of the LOC169090 gene, complete sequence Length = 209317 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 352 cacatggccttctgctcctccctc 375 |||||||||||||||| ||||||| Sbjct: 170868 cacatggccttctgcttctccctc 170845
>ref|XM_504157.1| Yarrowia lipolytica CLIB122, YALI0E19679g predicted mRNA Length = 1278 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 385 ctcgtccgcgtcttccgcgtcgtc 408 |||||||||||| ||||||||||| Sbjct: 144 ctcgtccgcgtcgtccgcgtcgtc 167
>emb|AL939114.1|SCO939114 Streptomyces coelicolor A3(2) complete genome; segment 11/29 Length = 313800 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 272 tcaccgtcatcgtctacaac 291 |||||||||||||||||||| Sbjct: 232298 tcaccgtcatcgtctacaac 232317
>dbj|AP007154.1| Aspergillus oryzae RIB40 genomic DNA, SC001 Length = 2005935 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 363 ctgctcctccctcgccgtcg 382 |||||||||||||||||||| Sbjct: 977598 ctgctcctccctcgccgtcg 977579
>gb|AC125471.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0042J17, complete sequence Length = 171442 Score = 40.1 bits (20), Expect = 6.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 173 tggcgaaggaggccggcggcgagggggc 200 |||||| |||||||||||||| |||||| Sbjct: 82665 tggcgacggaggccggcggcgtgggggc 82692
>dbj|AP003412.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1150F11 Length = 130355 Score = 40.1 bits (20), Expect = 6.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 171 catggcgaaggaggccggcggcgagggg 198 ||||| ||||||||||| |||||||||| Sbjct: 17749 catggggaaggaggccgtcggcgagggg 17722
>dbj|AP003269.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0504E02 Length = 137468 Score = 40.1 bits (20), Expect = 6.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 171 catggcgaaggaggccggcggcgagggg 198 ||||| ||||||||||| |||||||||| Sbjct: 97889 catggggaaggaggccgtcggcgagggg 97862
>dbj|BA000013.4| Mesorhizobium loti MAFF303099 pMLa DNA, cpmplete genome Length = 351911 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 427 gccatgaccacgcagctcta 446 |||||||||||||||||||| Sbjct: 267180 gccatgaccacgcagctcta 267199
>dbj|AK073733.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033059B18, full insert sequence Length = 2240 Score = 40.1 bits (20), Expect = 6.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 171 catggcgaaggaggccggcggcgagggg 198 ||||| ||||||||||| |||||||||| Sbjct: 220 catggggaaggaggccgtcggcgagggg 247
>gb|AY109992.1| Zea mays CL9168_1 mRNA sequence Length = 1226 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 206 cggagtcggtgctccgcaag 225 |||||||||||||||||||| Sbjct: 1159 cggagtcggtgctccgcaag 1140
>gb|AY105378.1| Zea mays PCO101520 mRNA sequence Length = 500 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 206 cggagtcggtgctccgcaag 225 |||||||||||||||||||| Sbjct: 96 cggagtcggtgctccgcaag 115
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 373 ctcgccgtcgcgctcgtccg 392 |||||||||||||||||||| Sbjct: 2348893 ctcgccgtcgcgctcgtccg 2348912
>emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB 122 of Yarrowia lipolytica Length = 4224103 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 385 ctcgtccgcgtcttccgcgtcgtc 408 |||||||||||| ||||||||||| Sbjct: 2348145 ctcgtccgcgtcgtccgcgtcgtc 2348168 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,760,197 Number of Sequences: 3902068 Number of extensions: 2760197 Number of successful extensions: 73109 Number of sequences better than 10.0: 68 Number of HSP's better than 10.0 without gapping: 73 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 71356 Number of HSP's gapped (non-prelim): 1753 length of query: 482 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 460 effective length of database: 17,147,199,772 effective search space: 7887711895120 effective search space used: 7887711895120 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
