ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast78c10
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1MBA2_ECOLI (P07112) Mobilization protein A 29 3.8
2B2L13_MOUSE (P59017) Bcl-2-like 13 protein (Mil1 protein) (Bcl-r... 28 5.0
3SPEG_HUMAN (Q15772) Striated muscle preferentially expressed pro... 28 8.5

>MBA2_ECOLI (P07112) Mobilization protein A|
          Length = 708

 Score = 28.9 bits (63), Expect = 3.8
 Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
 Frame = -2

Query: 133 PSPRVSAAWGEEERRRP--WGWPGASQTLAGGAESGDERRGDR 11
           P+ +  A  G  E   P   G  GA Q +AGG+  G++RR +R
Sbjct: 290 PAGQRGAGGGVAESPAPDRGGMGGAGQRVAGGSRRGEQRRAER 332



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>B2L13_MOUSE (P59017) Bcl-2-like 13 protein (Mil1 protein) (Bcl-rambo)|
          Length = 434

 Score = 28.5 bits (62), Expect = 5.0
 Identities = 15/41 (36%), Positives = 19/41 (46%)
 Frame = -2

Query: 133 PSPRVSAAWGEEERRRPWGWPGASQTLAGGAESGDERRGDR 11
           P+P V    GEEE       P A +   G A+  +ER G R
Sbjct: 344 PTPSVFVELGEEELEAVTARPEAVERAEGAAQLSEERAGSR 384



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>SPEG_HUMAN (Q15772) Striated muscle preferentially expressed protein kinase|
           (EC 2.7.11.1) (Aortic preferentially expressed protein
           1) (APEG-1)
          Length = 3223

 Score = 27.7 bits (60), Expect = 8.5
 Identities = 14/28 (50%), Positives = 15/28 (53%)
 Frame = -2

Query: 103 EEERRRPWGWPGASQTLAGGAESGDERR 20
           + ER  PWG PGASQ       S  ERR
Sbjct: 440 KSERGAPWGTPGASQEELRAPGSVAERR 467


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.314    0.125    0.356 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,253,542
Number of Sequences: 219361
Number of extensions: 171686
Number of successful extensions: 657
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 640
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 657
length of database: 80,573,946
effective HSP length: 45
effective length of database: 70,702,701
effective search space used: 1696864824
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
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