ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast78c10 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AE016817.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome IV, complete sequence Length = 1466886 Score = 46.1 bits (23), Expect = 0.043 Identities = 23/23 (100%) Strand = Plus / Minus Query: 175 tcttcgagctcagcgacgtgctc 197 ||||||||||||||||||||||| Sbjct: 855718 tcttcgagctcagcgacgtgctc 855696
>ref|NM_209532.1| Eremothecium gossypii ADR083Wp (ADR083W), mRNA Length = 1590 Score = 46.1 bits (23), Expect = 0.043 Identities = 23/23 (100%) Strand = Plus / Minus Query: 175 tcttcgagctcagcgacgtgctc 197 ||||||||||||||||||||||| Sbjct: 487 tcttcgagctcagcgacgtgctc 465
>ref|XM_469320.1| Oryza sativa (japonica cultivar-group), mRNA Length = 762 Score = 44.1 bits (22), Expect = 0.17 Identities = 32/34 (94%), Gaps = 1/34 (2%) Strand = Plus / Minus Query: 71 cggccacccccacg-gccgccgccgctcctcctc 103 ||||| |||||||| ||||||||||||||||||| Sbjct: 609 cggccccccccacgcgccgccgccgctcctcctc 576
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 44.1 bits (22), Expect = 0.17 Identities = 32/34 (94%), Gaps = 1/34 (2%) Strand = Plus / Minus Query: 71 cggccacccccacg-gccgccgccgctcctcctc 103 ||||| |||||||| ||||||||||||||||||| Sbjct: 26942102 cggccccccccacgcgccgccgccgctcctcctc 26942069 Score = 42.1 bits (21), Expect = 0.67 Identities = 21/21 (100%) Strand = Plus / Minus Query: 156 gccgccgccagatccgccgtc 176 ||||||||||||||||||||| Sbjct: 33299516 gccgccgccagatccgccgtc 33299496 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 143 tgccgagccccctgccgccg 162 |||||||||||||||||||| Sbjct: 27552696 tgccgagccccctgccgccg 27552677 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 85 gccgccgccgctcctcctctcccc 108 |||||||||||||| ||||||||| Sbjct: 2801346 gccgccgccgctccgcctctcccc 2801323
>gb|AC087412.14| Oryza sativa chromosome 3 BAC OSJNBb0070O09 genomic sequence, complete sequence Length = 149303 Score = 44.1 bits (22), Expect = 0.17 Identities = 32/34 (94%), Gaps = 1/34 (2%) Strand = Plus / Minus Query: 71 cggccacccccacg-gccgccgccgctcctcctc 103 ||||| |||||||| ||||||||||||||||||| Sbjct: 121102 cggccccccccacgcgccgccgccgctcctcctc 121069
>emb|BX548154.1|CNS09SBK clone A24K23, A41I8 of Tetraodon nigroviridis Length = 265677 Score = 44.1 bits (22), Expect = 0.17 Identities = 22/22 (100%) Strand = Plus / Plus Query: 85 gccgccgccgctcctcctctcc 106 |||||||||||||||||||||| Sbjct: 21219 gccgccgccgctcctcctctcc 21240
>emb|BX572609.1|CNS09SBP Tetraodon nigroviridis BAC sequence Length = 265677 Score = 44.1 bits (22), Expect = 0.17 Identities = 22/22 (100%) Strand = Plus / Plus Query: 85 gccgccgccgctcctcctctcc 106 |||||||||||||||||||||| Sbjct: 21219 gccgccgccgctcctcctctcc 21240
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 44.1 bits (22), Expect = 0.17 Identities = 22/22 (100%) Strand = Plus / Plus Query: 153 cctgccgccgccagatccgccg 174 |||||||||||||||||||||| Sbjct: 3703470 cctgccgccgccagatccgccg 3703491 Score = 42.1 bits (21), Expect = 0.67 Identities = 21/21 (100%) Strand = Plus / Plus Query: 153 cctgccgccgccagatccgcc 173 ||||||||||||||||||||| Sbjct: 14978176 cctgccgccgccagatccgcc 14978196 Score = 40.1 bits (20), Expect = 2.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 85 gccgccgccgctcctcctctccccaagc 112 ||||||||||||| ||||||||||||| Sbjct: 25314648 gccgccgccgctcagcctctccccaagc 25314621 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 79 cccacggccgccgccgctcc 98 |||||||||||||||||||| Sbjct: 19867276 cccacggccgccgccgctcc 19867295 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 85 gccgccgccgctcctcctctcccc 108 |||||||||||||| ||||||||| Sbjct: 15051799 gccgccgccgctccgcctctcccc 15051822
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 44.1 bits (22), Expect = 0.17 Identities = 25/26 (96%) Strand = Plus / Plus Query: 70 ccggccacccccacggccgccgccgc 95 ||||||||| |||||||||||||||| Sbjct: 20638177 ccggccaccaccacggccgccgccgc 20638202 Score = 42.1 bits (21), Expect = 0.67 Identities = 24/25 (96%) Strand = Plus / Minus Query: 76 acccccacggccgccgccgctcctc 100 |||||||| |||||||||||||||| Sbjct: 918131 acccccaccgccgccgccgctcctc 918107
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 44.1 bits (22), Expect = 0.17 Identities = 32/34 (94%), Gaps = 1/34 (2%) Strand = Plus / Minus Query: 71 cggccacccccacg-gccgccgccgctcctcctc 103 ||||| |||||||| ||||||||||||||||||| Sbjct: 27033425 cggccccccccacgcgccgccgccgctcctcctc 27033392 Score = 42.1 bits (21), Expect = 0.67 Identities = 21/21 (100%) Strand = Plus / Minus Query: 156 gccgccgccagatccgccgtc 176 ||||||||||||||||||||| Sbjct: 33390026 gccgccgccagatccgccgtc 33390006 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 143 tgccgagccccctgccgccg 162 |||||||||||||||||||| Sbjct: 27644019 tgccgagccccctgccgccg 27644000 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 85 gccgccgccgctcctcctctcccc 108 |||||||||||||| ||||||||| Sbjct: 2801457 gccgccgccgctccgcctctcccc 2801434
>emb|BX936166.1| Gallus gallus finished cDNA, clone ChEST143h17 Length = 1058 Score = 44.1 bits (22), Expect = 0.17 Identities = 25/26 (96%) Strand = Plus / Minus Query: 78 ccccacggccgccgccgctcctcctc 103 |||| ||||||||||||||||||||| Sbjct: 65 ccccgcggccgccgccgctcctcctc 40
>emb|BX934492.1| Gallus gallus finished cDNA, clone ChEST606k15 Length = 1052 Score = 44.1 bits (22), Expect = 0.17 Identities = 25/26 (96%) Strand = Plus / Minus Query: 78 ccccacggccgccgccgctcctcctc 103 |||| ||||||||||||||||||||| Sbjct: 60 ccccgcggccgccgccgctcctcctc 35
>dbj|AP005092.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1112_E07 Length = 132055 Score = 44.1 bits (22), Expect = 0.17 Identities = 25/26 (96%) Strand = Plus / Plus Query: 70 ccggccacccccacggccgccgccgc 95 ||||||||| |||||||||||||||| Sbjct: 31788 ccggccaccaccacggccgccgccgc 31813
>dbj|AP005314.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0515E01 Length = 140063 Score = 44.1 bits (22), Expect = 0.17 Identities = 25/26 (96%) Strand = Plus / Plus Query: 70 ccggccacccccacggccgccgccgc 95 ||||||||| |||||||||||||||| Sbjct: 103835 ccggccaccaccacggccgccgccgc 103860
>dbj|AK070942.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023067J04, full insert sequence Length = 451 Score = 44.1 bits (22), Expect = 0.17 Identities = 22/22 (100%) Strand = Plus / Minus Query: 85 gccgccgccgctcctcctctcc 106 |||||||||||||||||||||| Sbjct: 95 gccgccgccgctcctcctctcc 74
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 44.1 bits (22), Expect = 0.17 Identities = 22/22 (100%) Strand = Plus / Plus Query: 153 cctgccgccgccagatccgccg 174 |||||||||||||||||||||| Sbjct: 3703444 cctgccgccgccagatccgccg 3703465 Score = 42.1 bits (21), Expect = 0.67 Identities = 21/21 (100%) Strand = Plus / Plus Query: 153 cctgccgccgccagatccgcc 173 ||||||||||||||||||||| Sbjct: 14932459 cctgccgccgccagatccgcc 14932479 Score = 40.1 bits (20), Expect = 2.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 85 gccgccgccgctcctcctctccccaagc 112 ||||||||||||| ||||||||||||| Sbjct: 25242824 gccgccgccgctcagcctctccccaagc 25242797 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 79 cccacggccgccgccgctcc 98 |||||||||||||||||||| Sbjct: 19793490 cccacggccgccgccgctcc 19793509 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 85 gccgccgccgctcctcctctcccc 108 |||||||||||||| ||||||||| Sbjct: 15006082 gccgccgccgctccgcctctcccc 15006105
>emb|AL713933.6|CNS07YPE Oryza sativa chromosome 12, . BAC OJ1041_D02 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 104421 Score = 44.1 bits (22), Expect = 0.17 Identities = 22/22 (100%) Strand = Plus / Minus Query: 153 cctgccgccgccagatccgccg 174 |||||||||||||||||||||| Sbjct: 46203 cctgccgccgccagatccgccg 46182
>gb|AY632421.1| Streptomyces viridochromogenes PTT biosynthetic gene Length = 40241 Score = 42.1 bits (21), Expect = 0.67 Identities = 24/25 (96%) Strand = Plus / Minus Query: 67 cgcccggccacccccacggccgccg 91 ||||||||| ||||||||||||||| Sbjct: 27477 cgcccggcctcccccacggccgccg 27453
>ref|XM_475421.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 570 Score = 42.1 bits (21), Expect = 0.67 Identities = 21/21 (100%) Strand = Plus / Minus Query: 83 cggccgccgccgctcctcctc 103 ||||||||||||||||||||| Sbjct: 277 cggccgccgccgctcctcctc 257
>ref|XM_516043.1| PREDICTED: Pan troglodytes similar to Abi2 protein (LOC459892), mRNA Length = 1596 Score = 42.1 bits (21), Expect = 0.67 Identities = 21/21 (100%) Strand = Plus / Plus Query: 87 cgccgccgctcctcctctccc 107 ||||||||||||||||||||| Sbjct: 94 cgccgccgctcctcctctccc 114
>ref|NM_186809.1| Oryza sativa (japonica cultivar-group), mRNA Length = 366 Score = 42.1 bits (21), Expect = 0.67 Identities = 24/25 (96%) Strand = Plus / Plus Query: 73 gccacccccacggccgccgccgctc 97 ||||||||||| ||||||||||||| Sbjct: 153 gccacccccacagccgccgccgctc 177
>gb|AC135421.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0012G21, complete sequence Length = 135750 Score = 42.1 bits (21), Expect = 0.67 Identities = 21/21 (100%) Strand = Plus / Minus Query: 84 ggccgccgccgctcctcctct 104 ||||||||||||||||||||| Sbjct: 77737 ggccgccgccgctcctcctct 77717
>gb|AE009400.1| Agrobacterium tumefaciens str. C58 linear chromosome, section 170 of 187 of the complete sequence Length = 11620 Score = 42.1 bits (21), Expect = 0.67 Identities = 21/21 (100%) Strand = Plus / Minus Query: 149 gccccctgccgccgccagatc 169 ||||||||||||||||||||| Sbjct: 3884 gccccctgccgccgccagatc 3864
>gb|AE008214.1| Agrobacterium tumefaciens str. C58 linear chromosome, section 18 of 187 of the complete sequence Length = 10609 Score = 42.1 bits (21), Expect = 0.67 Identities = 21/21 (100%) Strand = Plus / Plus Query: 149 gccccctgccgccgccagatc 169 ||||||||||||||||||||| Sbjct: 8574 gccccctgccgccgccagatc 8594
>gb|AC144737.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0018K15, complete sequence Length = 168519 Score = 42.1 bits (21), Expect = 0.67 Identities = 21/21 (100%) Strand = Plus / Minus Query: 83 cggccgccgccgctcctcctc 103 ||||||||||||||||||||| Sbjct: 52248 cggccgccgccgctcctcctc 52228
>gb|CP000058.1| Pseudomonas syringae pv. phaseolicola 1448A, complete genome Length = 5928787 Score = 42.1 bits (21), Expect = 0.67 Identities = 21/21 (100%) Strand = Plus / Plus Query: 73 gccacccccacggccgccgcc 93 ||||||||||||||||||||| Sbjct: 4794553 gccacccccacggccgccgcc 4794573
>gb|AC135563.5| Oryza sativa chromosome 3 BAC OSJNBb0015I02 genomic sequence, complete sequence Length = 122815 Score = 42.1 bits (21), Expect = 0.67 Identities = 21/21 (100%) Strand = Plus / Minus Query: 156 gccgccgccagatccgccgtc 176 ||||||||||||||||||||| Sbjct: 56032 gccgccgccagatccgccgtc 56012
>gb|AC104846.2| Oryza sativa (japonica cultivar-group) chromosome 11 PAC clone P0004C07, complete sequence Length = 135425 Score = 42.1 bits (21), Expect = 0.67 Identities = 21/21 (100%) Strand = Plus / Plus Query: 86 ccgccgccgctcctcctctcc 106 ||||||||||||||||||||| Sbjct: 64619 ccgccgccgctcctcctctcc 64639
>emb|X65195.2|SVPTT Streptomyces viridochromogenes strain Tue494 phosphinothricin tripeptide biosynthetic gene cluster: ORFB1, ORFB2, ORF1, phsB gene, ORFM, phsC gene, pmi gene, adhP gene, ORF3, pgdP gene, ppm gene, ppd gene, ORFx, pgmP gene, cpps gene, cppm gene, aldP gene, pmet gene, pms gene, phsA gene, pat gene, dea gene, the1 gene, the2 gene, trs gene, prpA gene, ORFE1, ORFE2 and ORFE3 (partial) Length = 37823 Score = 42.1 bits (21), Expect = 0.67 Identities = 24/25 (96%) Strand = Plus / Minus Query: 67 cgcccggccacccccacggccgccg 91 ||||||||| ||||||||||||||| Sbjct: 29079 cgcccggcctcccccacggccgccg 29055
>emb|CR857714.1| Pongo pygmaeus mRNA; cDNA DKFZp459H161 (from clone DKFZp459H161) Length = 1738 Score = 42.1 bits (21), Expect = 0.67 Identities = 21/21 (100%) Strand = Plus / Plus Query: 87 cgccgccgctcctcctctccc 107 ||||||||||||||||||||| Sbjct: 27 cgccgccgctcctcctctccc 47
>dbj|AK125205.1| Homo sapiens cDNA FLJ43215 fis, clone FEBRA2021908 Length = 2387 Score = 42.1 bits (21), Expect = 0.67 Identities = 21/21 (100%) Strand = Plus / Minus Query: 87 cgccgccgctcctcctctccc 107 ||||||||||||||||||||| Sbjct: 794 cgccgccgctcctcctctccc 774
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 42.1 bits (21), Expect = 0.67 Identities = 21/21 (100%) Strand = Plus / Plus Query: 86 ccgccgccgctcctcctctcc 106 ||||||||||||||||||||| Sbjct: 24463528 ccgccgccgctcctcctctcc 24463548 Score = 40.1 bits (20), Expect = 2.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 73 gccacccccacggccgccgccgctcctc 100 |||||| |||| |||||||||||||||| Sbjct: 21770241 gccaccgccaccgccgccgccgctcctc 21770214 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 83 cggccgccgccgctcctcct 102 |||||||||||||||||||| Sbjct: 5317156 cggccgccgccgctcctcct 5317175
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 42.1 bits (21), Expect = 0.67 Identities = 21/21 (100%) Strand = Plus / Plus Query: 85 gccgccgccgctcctcctctc 105 ||||||||||||||||||||| Sbjct: 6110708 gccgccgccgctcctcctctc 6110728 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 ccgccgctcctcctctcccc 108 |||||||||||||||||||| Sbjct: 23641013 ccgccgctcctcctctcccc 23640994 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 87 cgccgccgctcctcctctccccaa 110 ||||||||| |||||||||||||| Sbjct: 19705071 cgccgccgcccctcctctccccaa 19705094
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 42.1 bits (21), Expect = 0.67 Identities = 24/25 (96%) Strand = Plus / Plus Query: 73 gccacccccacggccgccgccgctc 97 ||||||||||| ||||||||||||| Sbjct: 7979535 gccacccccacagccgccgccgctc 7979559 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 86 ccgccgccgctcctcctctcccca 109 |||||||||||||||||| ||||| Sbjct: 23357439 ccgccgccgctcctcctcacccca 23357462
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 42.1 bits (21), Expect = 0.67 Identities = 21/21 (100%) Strand = Plus / Minus Query: 83 cggccgccgccgctcctcctc 103 ||||||||||||||||||||| Sbjct: 23366712 cggccgccgccgctcctcctc 23366692 Score = 42.1 bits (21), Expect = 0.67 Identities = 21/21 (100%) Strand = Plus / Minus Query: 84 ggccgccgccgctcctcctct 104 ||||||||||||||||||||| Sbjct: 21825328 ggccgccgccgctcctcctct 21825308 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 79 cccacggccgccgccgctcc 98 |||||||||||||||||||| Sbjct: 17176108 cccacggccgccgccgctcc 17176089
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 42.1 bits (21), Expect = 0.67 Identities = 21/21 (100%) Strand = Plus / Minus Query: 85 gccgccgccgctcctcctctc 105 ||||||||||||||||||||| Sbjct: 35478303 gccgccgccgctcctcctctc 35478283 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 84 ggccgccgccgctcctcctc 103 |||||||||||||||||||| Sbjct: 26067599 ggccgccgccgctcctcctc 26067618 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 cggccgccgccgctcctcct 102 |||||||||||||||||||| Sbjct: 14120060 cggccgccgccgctcctcct 14120041
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 0.67 Identities = 21/21 (100%) Strand = Plus / Minus Query: 85 gccgccgccgctcctcctctc 105 ||||||||||||||||||||| Sbjct: 25424539 gccgccgccgctcctcctctc 25424519 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 85 gccgccgccgctcctcctct 104 |||||||||||||||||||| Sbjct: 22557751 gccgccgccgctcctcctct 22557732 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 85 gccgccgccgctcctcctctcccc 108 |||||||||||||| ||||||||| Sbjct: 8743849 gccgccgccgctccacctctcccc 8743872 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 85 gccgccgccgctcctcctctcccc 108 |||||||||||||| ||||||||| Sbjct: 8743820 gccgccgccgctccgcctctcccc 8743843
>gb|AC011481.4|AC011481 Homo sapiens chromosome 19 clone CTB-129P6, complete sequence Length = 107567 Score = 42.1 bits (21), Expect = 0.67 Identities = 21/21 (100%) Strand = Plus / Minus Query: 92 ccgctcctcctctccccaagc 112 ||||||||||||||||||||| Sbjct: 48797 ccgctcctcctctccccaagc 48777
>gb|AC080075.7| Homo sapiens BAC clone RP11-363J17 from 2, complete sequence Length = 99370 Score = 42.1 bits (21), Expect = 0.67 Identities = 21/21 (100%) Strand = Plus / Plus Query: 87 cgccgccgctcctcctctccc 107 ||||||||||||||||||||| Sbjct: 35799 cgccgccgctcctcctctccc 35819
>gb|AF261280.1|AF261280 Pan troglodytes apolipoprotein-E gene, complete cds Length = 5413 Score = 42.1 bits (21), Expect = 0.67 Identities = 21/21 (100%) Strand = Plus / Minus Query: 92 ccgctcctcctctccccaagc 112 ||||||||||||||||||||| Sbjct: 1216 ccgctcctcctctccccaagc 1196
>gb|AF261279.1|AF261279 Homo sapiens apolipoprotein-E gene, complete cds Length = 5491 Score = 42.1 bits (21), Expect = 0.67 Identities = 21/21 (100%) Strand = Plus / Minus Query: 92 ccgctcctcctctccccaagc 112 ||||||||||||||||||||| Sbjct: 1226 ccgctcctcctctccccaagc 1206
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 42.1 bits (21), Expect = 0.67 Identities = 21/21 (100%) Strand = Plus / Minus Query: 34 ccgactccgcgccgccggcga 54 ||||||||||||||||||||| Sbjct: 474159 ccgactccgcgccgccggcga 474139
>dbj|AP005709.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0646B04 Length = 178896 Score = 42.1 bits (21), Expect = 0.67 Identities = 24/25 (96%) Strand = Plus / Minus Query: 76 acccccacggccgccgccgctcctc 100 |||||||| |||||||||||||||| Sbjct: 82258 acccccaccgccgccgccgctcctc 82234
>dbj|AP004317.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0663E10 Length = 162297 Score = 42.1 bits (21), Expect = 0.67 Identities = 21/21 (100%) Strand = Plus / Minus Query: 85 gccgccgccgctcctcctctc 105 ||||||||||||||||||||| Sbjct: 114539 gccgccgccgctcctcctctc 114519
>dbj|AP003754.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1341_A08 Length = 128955 Score = 42.1 bits (21), Expect = 0.67 Identities = 24/25 (96%) Strand = Plus / Plus Query: 73 gccacccccacggccgccgccgctc 97 ||||||||||| ||||||||||||| Sbjct: 17732 gccacccccacagccgccgccgctc 17756
>dbj|AP003989.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1063_D06 Length = 102439 Score = 42.1 bits (21), Expect = 0.67 Identities = 21/21 (100%) Strand = Plus / Minus Query: 85 gccgccgccgctcctcctctc 105 ||||||||||||||||||||| Sbjct: 89824 gccgccgccgctcctcctctc 89804
>dbj|AP004565.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0486F07 Length = 154926 Score = 42.1 bits (21), Expect = 0.67 Identities = 21/21 (100%) Strand = Plus / Plus Query: 85 gccgccgccgctcctcctctc 105 ||||||||||||||||||||| Sbjct: 66725 gccgccgccgctcctcctctc 66745
>dbj|AP004382.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0418E08 Length = 141040 Score = 42.1 bits (21), Expect = 0.67 Identities = 24/25 (96%) Strand = Plus / Plus Query: 73 gccacccccacggccgccgccgctc 97 ||||||||||| ||||||||||||| Sbjct: 95894 gccacccccacagccgccgccgctc 95918
>dbj|AK111029.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-174-H07, full insert sequence Length = 888 Score = 42.1 bits (21), Expect = 0.67 Identities = 21/21 (100%) Strand = Plus / Minus Query: 83 cggccgccgccgctcctcctc 103 ||||||||||||||||||||| Sbjct: 327 cggccgccgccgctcctcctc 307
>dbj|AK103499.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033131B09, full insert sequence Length = 1714 Score = 42.1 bits (21), Expect = 0.67 Identities = 24/25 (96%) Strand = Plus / Plus Query: 76 acccccacggccgccgccgctcctc 100 |||||||| |||||||||||||||| Sbjct: 252 acccccaccgccgccgccgctcctc 276
>emb|AJ324801.1|HSA324801 Homo sapiens genomic sequence surrounding NotI site, clone NR5-IE8R Length = 795 Score = 42.1 bits (21), Expect = 0.67 Identities = 21/21 (100%) Strand = Plus / Minus Query: 87 cgccgccgctcctcctctccc 107 ||||||||||||||||||||| Sbjct: 51 cgccgccgctcctcctctccc 31
>dbj|AK066738.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013087I11, full insert sequence Length = 2277 Score = 42.1 bits (21), Expect = 0.67 Identities = 21/21 (100%) Strand = Plus / Plus Query: 85 gccgccgccgctcctcctctc 105 ||||||||||||||||||||| Sbjct: 87 gccgccgccgctcctcctctc 107
>gb|AF050154.1|AF050154 Homo sapiens clone F19374 APO E-C2 gene cluster, complete sequence Length = 41907 Score = 42.1 bits (21), Expect = 0.67 Identities = 21/21 (100%) Strand = Plus / Minus Query: 92 ccgctcctcctctccccaagc 112 ||||||||||||||||||||| Sbjct: 18539 ccgctcctcctctccccaagc 18519
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 42.1 bits (21), Expect = 0.67 Identities = 21/21 (100%) Strand = Plus / Plus Query: 86 ccgccgccgctcctcctctcc 106 ||||||||||||||||||||| Sbjct: 24775197 ccgccgccgctcctcctctcc 24775217 Score = 40.1 bits (20), Expect = 2.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 73 gccacccccacggccgccgccgctcctc 100 |||||| |||| |||||||||||||||| Sbjct: 22080440 gccaccgccaccgccgccgccgctcctc 22080413 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 83 cggccgccgccgctcctcct 102 |||||||||||||||||||| Sbjct: 5383633 cggccgccgccgctcctcct 5383652
>emb|AL731873.5|CNS08C8D Oryza sativa chromosome 12, . BAC OSJNBa0068D20 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 174521 Score = 42.1 bits (21), Expect = 0.67 Identities = 21/21 (100%) Strand = Plus / Minus Query: 153 cctgccgccgccagatccgcc 173 ||||||||||||||||||||| Sbjct: 103671 cctgccgccgccagatccgcc 103651 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 85 gccgccgccgctcctcctctcccc 108 |||||||||||||| ||||||||| Sbjct: 30048 gccgccgccgctccgcctctcccc 30025
>gb|AF055343.1|AF055343 Homo sapiens apolipoprotein E (APOE) gene, 5' regulatory region, partial sequence Length = 1426 Score = 42.1 bits (21), Expect = 0.67 Identities = 21/21 (100%) Strand = Plus / Minus Query: 92 ccgctcctcctctccccaagc 112 ||||||||||||||||||||| Sbjct: 1195 ccgctcctcctctccccaagc 1175
>gb|M10065.1|HUMAPOE4 Human apolipoprotein E (epsilon-4 allele) gene, complete cds Length = 5515 Score = 42.1 bits (21), Expect = 0.67 Identities = 21/21 (100%) Strand = Plus / Minus Query: 92 ccgctcctcctctccccaagc 112 ||||||||||||||||||||| Sbjct: 1222 ccgctcctcctctccccaagc 1202
>gb|M29322.1|BABAPOE Baboon apolipoprotein E (ApoE) gene, complete cds Length = 4762 Score = 42.1 bits (21), Expect = 0.67 Identities = 21/21 (100%) Strand = Plus / Minus Query: 92 ccgctcctcctctccccaagc 112 ||||||||||||||||||||| Sbjct: 195 ccgctcctcctctccccaagc 175
>ref|NM_200598.2| Danio rerio interferon regulatory factor 6 (irf6), mRNA Length = 2752 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 83 cggccgccgccgctcctcct 102 |||||||||||||||||||| Sbjct: 866 cggccgccgccgctcctcct 885
>ref|NM_187946.1| Oryza sativa (japonica cultivar-group), Ozsa8366 predicted mRNA Length = 885 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 85 gccgccgccgctcctcctctcccc 108 |||||||||||||| ||||||||| Sbjct: 406 gccgccgccgctccacctctcccc 429
>ref|XM_482973.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1880 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 ccgccgctcctcctctcccc 108 |||||||||||||||||||| Sbjct: 248 ccgccgctcctcctctcccc 229
>ref|XM_463355.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2661 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 85 gccgccgccgctcctcctct 104 |||||||||||||||||||| Sbjct: 35 gccgccgccgctcctcctct 54
>ref|XM_469363.1| Oryza sativa (japonica cultivar-group), mRNA Length = 921 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 143 tgccgagccccctgccgccg 162 |||||||||||||||||||| Sbjct: 495 tgccgagccccctgccgccg 514
>gb|AC135929.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0692D12, complete sequence Length = 164064 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 79 cccacggccgccgccgctcc 98 |||||||||||||||||||| Sbjct: 120243 cccacggccgccgccgctcc 120224
>gb|AY017853.1| Oryza sativa microsatellite MRG0178 containing (AG)X13, closest to marker S10576, genomic sequence Length = 226 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 cggccgccgccgctcctcct 102 |||||||||||||||||||| Sbjct: 70 cggccgccgccgctcctcct 51
>ref|XM_429441.1| PREDICTED: Gallus gallus LOC416557 (LOC416557), mRNA Length = 705 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 78 ccccacggccgccgccgctc 97 |||||||||||||||||||| Sbjct: 306 ccccacggccgccgccgctc 287
>ref|XM_367307.1| Magnaporthe grisea 70-15 hypothetical protein (MG07232.4) partial mRNA Length = 1023 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 121 ccctcggcgacgggcgcgcg 140 |||||||||||||||||||| Sbjct: 119 ccctcggcgacgggcgcgcg 100
>gb|AC137744.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0074L11, complete sequence Length = 180703 Score = 40.1 bits (20), Expect = 2.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 73 gccacccccacggccgccgccgctcctc 100 |||||| |||| |||||||||||||||| Sbjct: 122294 gccaccgccaccgccgccgccgctcctc 122267
>gb|AC137998.2| Oryza sativa chromosome 3 BAC OSJNBa0010B01 genomic sequence, complete sequence Length = 27470 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 143 tgccgagccccctgccgccg 162 |||||||||||||||||||| Sbjct: 10078 tgccgagccccctgccgccg 10097
>ref|XM_546506.2| PREDICTED: Canis familiaris similar to Down syndrome cell adhesion molecule like 1 (LOC489388), mRNA Length = 6726 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 143 tgccgagccccctgccgccgccag 166 ||||||||||||||||||| |||| Sbjct: 5961 tgccgagccccctgccgcccccag 5984
>gb|AC123518.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0088N01, complete sequence Length = 123954 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 cggccgccgccgctcctcct 102 |||||||||||||||||||| Sbjct: 33059 cggccgccgccgctcctcct 33040
>gb|CP000088.1| Thermobifida fusca YX, complete genome Length = 3642249 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 182 gctcagcgacgtgctccggc 201 |||||||||||||||||||| Sbjct: 1254299 gctcagcgacgtgctccggc 1254280
>gb|CP000142.2| Pelobacter carbinolicus DSM 2380, complete genome Length = 3665893 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 cgactccgcgccgccggcga 54 |||||||||||||||||||| Sbjct: 1686423 cgactccgcgccgccggcga 1686404
>gb|BC056772.1| Danio rerio interferon regulatory factor 6, mRNA (cDNA clone MGC:63500 IMAGE:2640695), complete cds Length = 2451 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 83 cggccgccgccgctcctcct 102 |||||||||||||||||||| Sbjct: 820 cggccgccgccgctcctcct 839
>gb|AY660573.1| Oryza sativa (japonica cultivar-group) cultivar TP309 putative D type cyclin gene, partial cds Length = 1036 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 ccgccgctcctcctctcccc 108 |||||||||||||||||||| Sbjct: 586 ccgccgctcctcctctcccc 567
>gb|AC022681.8| Homo sapiens chromosome 8, clone RP11-731D24, complete sequence Length = 219658 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 95 ctcctcctctccccaagcag 114 |||||||||||||||||||| Sbjct: 45320 ctcctcctctccccaagcag 45301
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 37 actccgcgccgccggcgagg 56 |||||||||||||||||||| Sbjct: 403091 actccgcgccgccggcgagg 403110
>gb|AY857644.1|AY857643S2 Danio rerio interferon regulatory factor 6 (irf6) gene, partial sequence Length = 2313 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 83 cggccgccgccgctcctcct 102 |||||||||||||||||||| Sbjct: 220 cggccgccgccgctcctcct 239
>gb|AY725802.2| Danio rerio strain AB interferon regulatory factor 6 (irf6) mRNA, complete cds Length = 2752 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 83 cggccgccgccgctcctcct 102 |||||||||||||||||||| Sbjct: 866 cggccgccgccgctcctcct 885
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 85 gccgccgccgctcctcctctcccc 108 ||||||||||||||||||| |||| Sbjct: 27818507 gccgccgccgctcctcctcacccc 27818484 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 85 gccgccgccgctcctcctct 104 |||||||||||||||||||| Sbjct: 8109400 gccgccgccgctcctcctct 8109419
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 69 cccggccacccccacggccgccgc 92 |||||||||| ||||||||||||| Sbjct: 6158798 cccggccacctccacggccgccgc 6158775
>ref|XM_580056.1| PREDICTED: Rattus norvegicus LOC500296 (LOC500296), mRNA Length = 1472 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 70 ccggccacccccacggccgccgcc 93 |||||||||||| ||||||||||| Sbjct: 800 ccggccacccccgcggccgccgcc 777
>gb|AC137635.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0038D20, from chromosome 3, complete sequence Length = 165395 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 85 gccgccgccgctcctcctctcccc 108 |||||||||||||| ||||||||| Sbjct: 73302 gccgccgccgctccgcctctcccc 73279
>dbj|AP002817.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0699D11 Length = 140825 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 85 gccgccgccgctcctcctctcccc 108 |||||||||||||| ||||||||| Sbjct: 61306 gccgccgccgctccacctctcccc 61329 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 85 gccgccgccgctcctcctctcccc 108 |||||||||||||| ||||||||| Sbjct: 61277 gccgccgccgctccgcctctcccc 61300
>dbj|BA000022.2| Synechocystis sp. PCC 6803 DNA, complete genome Length = 3573470 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 76 acccccacggccgccgccgc 95 |||||||||||||||||||| Sbjct: 977427 acccccacggccgccgccgc 977408
>dbj|AP004643.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1113_A10 Length = 160089 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 ccgccgctcctcctctcccc 108 |||||||||||||||||||| Sbjct: 48609 ccgccgctcctcctctcccc 48590
>dbj|AP004182.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1199_H01 Length = 107252 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 86 ccgccgccgctcctcctctcccca 109 |||||||||||||||||| ||||| Sbjct: 38663 ccgccgccgctcctcctcacccca 38686
>dbj|AP003804.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1065_B06 Length = 113170 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 86 ccgccgccgctcctcctctcccca 109 |||||||||||||||||| ||||| Sbjct: 112697 ccgccgccgctcctcctcacccca 112720
>dbj|AP003332.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1097D05 Length = 144879 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 85 gccgccgccgctcctcctct 104 |||||||||||||||||||| Sbjct: 73488 gccgccgccgctcctcctct 73469
>dbj|AP005619.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0624H09 Length = 158719 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 85 gccgccgccgctcctcctct 104 |||||||||||||||||||| Sbjct: 1763 gccgccgccgctcctcctct 1782
>dbj|AP003490.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0592E11 Length = 153734 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 85 gccgccgccgctcctcctct 104 |||||||||||||||||||| Sbjct: 133169 gccgccgccgctcctcctct 133188
>dbj|AP004989.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:B1153E06 Length = 174588 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 85 gccgccgccgctcctcctctcccc 108 ||||||||||||||||||| |||| Sbjct: 167762 gccgccgccgctcctcctcacccc 167739
>dbj|AP003728.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0710B08 Length = 186991 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 85 gccgccgccgctcctcctctcccc 108 ||||||||||||||||||| |||| Sbjct: 121016 gccgccgccgctcctcctcacccc 120993
>dbj|AP004839.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0519A12 Length = 156676 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 84 ggccgccgccgctcctcctc 103 |||||||||||||||||||| Sbjct: 75045 ggccgccgccgctcctcctc 75064
>dbj|AP005306.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0030D07 Length = 133321 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 84 ggccgccgccgctcctcctc 103 |||||||||||||||||||| Sbjct: 131472 ggccgccgccgctcctcctc 131491
>dbj|AP004856.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1570_H12 Length = 129767 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 cggccgccgccgctcctcct 102 |||||||||||||||||||| Sbjct: 20080 cggccgccgccgctcctcct 20061
>dbj|AP005158.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0007M04 Length = 176293 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 87 cgccgccgctcctcctctccccaa 110 ||||||||| |||||||||||||| Sbjct: 34022 cgccgccgcccctcctctccccaa 34045
>dbj|AK120147.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013029E20, full insert sequence Length = 3668 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 85 gccgccgccgctcctcctct 104 |||||||||||||||||||| Sbjct: 1704 gccgccgccgctcctcctct 1723
>dbj|AK107927.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-134-H10, full insert sequence Length = 490 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 cggccgccgccgctcctcct 102 |||||||||||||||||||| Sbjct: 292 cggccgccgccgctcctcct 273
>dbj|AK070025.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023039C11, full insert sequence Length = 1880 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 ccgccgctcctcctctcccc 108 |||||||||||||||||||| Sbjct: 248 ccgccgctcctcctctcccc 229
>dbj|AK068030.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013134K08, full insert sequence Length = 2828 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 85 gccgccgccgctcctcctct 104 |||||||||||||||||||| Sbjct: 39 gccgccgccgctcctcctct 58
>emb|AL713931.5|CNS07YP8 Oryza sativa chromosome 12, . BAC OSJNBa0035B12 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 161160 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 79 cccacggccgccgccgctcc 98 |||||||||||||||||||| Sbjct: 144162 cccacggccgccgccgctcc 144181
>emb|AL731888.5|CNS08C8S Oryza sativa chromosome 12, . BAC OJ1118_C12 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 165433 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 79 cccacggccgccgccgctcc 98 |||||||||||||||||||| Sbjct: 159984 cccacggccgccgccgctcc 159965
>emb|AL732535.4|CNS08C9A Oryza sativa chromosome 12, . BAC OSJNBa0035N13 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 158927 Score = 40.1 bits (20), Expect = 2.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 85 gccgccgccgctcctcctctccccaagc 112 ||||||||||||| ||||||||||||| Sbjct: 22542 gccgccgccgctcagcctctccccaagc 22569 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,015,858 Number of Sequences: 3902068 Number of extensions: 2015858 Number of successful extensions: 176887 Number of sequences better than 10.0: 104 Number of HSP's better than 10.0 without gapping: 124 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 167026 Number of HSP's gapped (non-prelim): 9863 length of query: 209 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 187 effective length of database: 17,147,199,772 effective search space: 3206526357364 effective search space used: 3206526357364 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
