ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast78c08 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_197383.1| Oryza sativa (japonica cultivar-group) putaive mitochondrial inner membrane protein (OSJNBb0018B10.5), mRNA Length = 588 Score = 414 bits (209), Expect = e-112 Identities = 310/344 (90%) Strand = Plus / Plus Query: 139 ccccggccgccggaagtacagcccctaccaggacctcaacatgccctacaactacaagaa 198 |||||||||||||||||||| ||||||||| ||||||| || ||||||| |||| ||| Sbjct: 57 ccccggccgccggaagtacaacccctaccacgacctcagcaccccctacagctaccagac 116 Query: 199 cctctacgacctccccacctcgccggagttcctcttcgaggaggagtccgcggtgcagcg 258 ||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| Sbjct: 117 cctctacgacctccccacctcgccggagttcctcttccaggaggagtccgcggcgcagcg 176 Query: 259 ccgatcctggggcgagaacctcacgtactacacgggcatcgggtacctctctggcgccgt 318 ||| || ||||| ||||||||||| |||||||||||| ||||||||||||| |||||||| Sbjct: 177 ccgctcgtggggggagaacctcacctactacacgggcgtcgggtacctctccggcgccgt 236 Query: 319 gggtggcgccgccctcggcctccgcgacgccgccgccggcgcggagcccggggagaccgc 378 | |||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| Sbjct: 237 cgccggcgccgccctcggcctccgcgacgccgccgcgggcgcggagcccggggacaccgc 296 Query: 379 caagatccgcgccaaccgcttgctcaacgcctgcggcagctccggccgacgttacggcaa 438 ||||||||||||||||||| | |||||| |||||||| || |||||| || |||||| Sbjct: 297 caagatccgcgccaaccgcgtcctcaactcctgcggcggcggcggccgccggctcggcaa 356 Query: 439 caggctcggngtcattgggctgatgtacgccgggatggagagcg 482 |||||| || ||||| |||||||||||||||||||||||||||| Sbjct: 357 caggctgggcgtcatcgggctgatgtacgccgggatggagagcg 400 Score = 40.1 bits (20), Expect = 6.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 86 atggccgacccacgggtgttcccatcgggatc 117 ||||||||||| ||| ||||||| |||||||| Sbjct: 1 atggccgacccgcggctgttcccgtcgggatc 32
>gb|AC051634.6| Oryza sativa chromosome 10 BAC OSJNBb0018B10 genomic sequence, complete sequence Length = 135789 Score = 414 bits (209), Expect = e-112 Identities = 310/344 (90%) Strand = Plus / Minus Query: 139 ccccggccgccggaagtacagcccctaccaggacctcaacatgccctacaactacaagaa 198 |||||||||||||||||||| ||||||||| ||||||| || ||||||| |||| ||| Sbjct: 34394 ccccggccgccggaagtacaacccctaccacgacctcagcaccccctacagctaccagac 34335 Query: 199 cctctacgacctccccacctcgccggagttcctcttcgaggaggagtccgcggtgcagcg 258 ||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| Sbjct: 34334 cctctacgacctccccacctcgccggagttcctcttccaggaggagtccgcggcgcagcg 34275 Query: 259 ccgatcctggggcgagaacctcacgtactacacgggcatcgggtacctctctggcgccgt 318 ||| || ||||| ||||||||||| |||||||||||| ||||||||||||| |||||||| Sbjct: 34274 ccgctcgtggggggagaacctcacctactacacgggcgtcgggtacctctccggcgccgt 34215 Query: 319 gggtggcgccgccctcggcctccgcgacgccgccgccggcgcggagcccggggagaccgc 378 | |||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| Sbjct: 34214 cgccggcgccgccctcggcctccgcgacgccgccgcgggcgcggagcccggggacaccgc 34155 Query: 379 caagatccgcgccaaccgcttgctcaacgcctgcggcagctccggccgacgttacggcaa 438 ||||||||||||||||||| | |||||| |||||||| || |||||| || |||||| Sbjct: 34154 caagatccgcgccaaccgcgtcctcaactcctgcggcggcggcggccgccggctcggcaa 34095 Query: 439 caggctcggngtcattgggctgatgtacgccgggatggagagcg 482 |||||| || ||||| |||||||||||||||||||||||||||| Sbjct: 34094 caggctgggcgtcatcgggctgatgtacgccgggatggagagcg 34051 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 78 ccgccgccatggccgacccacgggtgttcccatcgggatc 117 ||||||||||||||||||| ||| ||||||| |||||||| Sbjct: 34458 ccgccgccatggccgacccgcggctgttcccgtcgggatc 34419
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 414 bits (209), Expect = e-112 Identities = 310/344 (90%) Strand = Plus / Minus Query: 139 ccccggccgccggaagtacagcccctaccaggacctcaacatgccctacaactacaagaa 198 |||||||||||||||||||| ||||||||| ||||||| || ||||||| |||| ||| Sbjct: 19577203 ccccggccgccggaagtacaacccctaccacgacctcagcaccccctacagctaccagac 19577144 Query: 199 cctctacgacctccccacctcgccggagttcctcttcgaggaggagtccgcggtgcagcg 258 ||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| Sbjct: 19577143 cctctacgacctccccacctcgccggagttcctcttccaggaggagtccgcggcgcagcg 19577084 Query: 259 ccgatcctggggcgagaacctcacgtactacacgggcatcgggtacctctctggcgccgt 318 ||| || ||||| ||||||||||| |||||||||||| ||||||||||||| |||||||| Sbjct: 19577083 ccgctcgtggggggagaacctcacctactacacgggcgtcgggtacctctccggcgccgt 19577024 Query: 319 gggtggcgccgccctcggcctccgcgacgccgccgccggcgcggagcccggggagaccgc 378 | |||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| Sbjct: 19577023 cgccggcgccgccctcggcctccgcgacgccgccgcgggcgcggagcccggggacaccgc 19576964 Query: 379 caagatccgcgccaaccgcttgctcaacgcctgcggcagctccggccgacgttacggcaa 438 ||||||||||||||||||| | |||||| |||||||| || |||||| || |||||| Sbjct: 19576963 caagatccgcgccaaccgcgtcctcaactcctgcggcggcggcggccgccggctcggcaa 19576904 Query: 439 caggctcggngtcattgggctgatgtacgccgggatggagagcg 482 |||||| || ||||| |||||||||||||||||||||||||||| Sbjct: 19576903 caggctgggcgtcatcgggctgatgtacgccgggatggagagcg 19576860 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 78 ccgccgccatggccgacccacgggtgttcccatcgggatc 117 ||||||||||||||||||| ||| ||||||| |||||||| Sbjct: 19577267 ccgccgccatggccgacccgcggctgttcccgtcgggatc 19577228 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 338 ctccgcgacgccgccgccggcgcgg 362 ||||||||||||||| ||||||||| Sbjct: 14169364 ctccgcgacgccgccaccggcgcgg 14169340 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 75 ccgccgccgccatggccgac 94 |||||||||||||||||||| Sbjct: 17845292 ccgccgccgccatggccgac 17845311 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 75 ccgccgccgccatggccgac 94 |||||||||||||||||||| Sbjct: 13404700 ccgccgccgccatggccgac 13404719
>dbj|AK107812.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-133-F03, full insert sequence Length = 944 Score = 414 bits (209), Expect = e-112 Identities = 310/344 (90%) Strand = Plus / Plus Query: 139 ccccggccgccggaagtacagcccctaccaggacctcaacatgccctacaactacaagaa 198 |||||||||||||||||||| ||||||||| ||||||| || ||||||| |||| ||| Sbjct: 162 ccccggccgccggaagtacaacccctaccacgacctcagcaccccctacagctaccagac 221 Query: 199 cctctacgacctccccacctcgccggagttcctcttcgaggaggagtccgcggtgcagcg 258 ||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| Sbjct: 222 cctctacgacctccccacctcgccggagttcctcttccaggaggagtccgcggcgcagcg 281 Query: 259 ccgatcctggggcgagaacctcacgtactacacgggcatcgggtacctctctggcgccgt 318 ||| || ||||| ||||||||||| |||||||||||| ||||||||||||| |||||||| Sbjct: 282 ccgctcgtggggggagaacctcacctactacacgggcgtcgggtacctctccggcgccgt 341 Query: 319 gggtggcgccgccctcggcctccgcgacgccgccgccggcgcggagcccggggagaccgc 378 | |||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| Sbjct: 342 cgccggcgccgccctcggcctccgcgacgccgccgcgggcgcggagcccggggacaccgc 401 Query: 379 caagatccgcgccaaccgcttgctcaacgcctgcggcagctccggccgacgttacggcaa 438 ||||||||||||||||||| | |||||| |||||||| || |||||| || |||||| Sbjct: 402 caagatccgcgccaaccgcgtcctcaactcctgcggcggcggcggccgccggctcggcaa 461 Query: 439 caggctcggngtcattgggctgatgtacgccgggatggagagcg 482 |||||| || ||||| |||||||||||||||||||||||||||| Sbjct: 462 caggctgggcgtcatcgggctgatgtacgccgggatggagagcg 505 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 78 ccgccgccatggccgacccacgggtgttcccatcgggatc 117 ||||||||||||||||||| ||| ||||||| |||||||| Sbjct: 98 ccgccgccatggccgacccgcggctgttcccgtcgggatc 137
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 414 bits (209), Expect = e-112 Identities = 310/344 (90%) Strand = Plus / Minus Query: 139 ccccggccgccggaagtacagcccctaccaggacctcaacatgccctacaactacaagaa 198 |||||||||||||||||||| ||||||||| ||||||| || ||||||| |||| ||| Sbjct: 19588479 ccccggccgccggaagtacaacccctaccacgacctcagcaccccctacagctaccagac 19588420 Query: 199 cctctacgacctccccacctcgccggagttcctcttcgaggaggagtccgcggtgcagcg 258 ||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| Sbjct: 19588419 cctctacgacctccccacctcgccggagttcctcttccaggaggagtccgcggcgcagcg 19588360 Query: 259 ccgatcctggggcgagaacctcacgtactacacgggcatcgggtacctctctggcgccgt 318 ||| || ||||| ||||||||||| |||||||||||| ||||||||||||| |||||||| Sbjct: 19588359 ccgctcgtggggggagaacctcacctactacacgggcgtcgggtacctctccggcgccgt 19588300 Query: 319 gggtggcgccgccctcggcctccgcgacgccgccgccggcgcggagcccggggagaccgc 378 | |||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| Sbjct: 19588299 cgccggcgccgccctcggcctccgcgacgccgccgcgggcgcggagcccggggacaccgc 19588240 Query: 379 caagatccgcgccaaccgcttgctcaacgcctgcggcagctccggccgacgttacggcaa 438 ||||||||||||||||||| | |||||| |||||||| || |||||| || |||||| Sbjct: 19588239 caagatccgcgccaaccgcgtcctcaactcctgcggcggcggcggccgccggctcggcaa 19588180 Query: 439 caggctcggngtcattgggctgatgtacgccgggatggagagcg 482 |||||| || ||||| |||||||||||||||||||||||||||| Sbjct: 19588179 caggctgggcgtcatcgggctgatgtacgccgggatggagagcg 19588136 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 78 ccgccgccatggccgacccacgggtgttcccatcgggatc 117 ||||||||||||||||||| ||| ||||||| |||||||| Sbjct: 19588543 ccgccgccatggccgacccgcggctgttcccgtcgggatc 19588504 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 338 ctccgcgacgccgccgccggcgcgg 362 ||||||||||||||| ||||||||| Sbjct: 14177606 ctccgcgacgccgccaccggcgcgg 14177582 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 75 ccgccgccgccatggccgac 94 |||||||||||||||||||| Sbjct: 17854545 ccgccgccgccatggccgac 17854564 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 75 ccgccgccgccatggccgac 94 |||||||||||||||||||| Sbjct: 13412040 ccgccgccgccatggccgac 13412059
>ref|NM_187549.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 585 Score = 202 bits (102), Expect = 8e-49 Identities = 245/293 (83%) Strand = Plus / Plus Query: 190 ctacaagaacctctacgacctccccacctcgccggagttcctcttcgaggaggagtccgc 249 ||||||| | |||||||||||||||||||| ||||||||||||||| |||||||||| Sbjct: 105 ctacaagcagctctacgacctccccacctccccggagttcctcttccaggaggagtcgct 164 Query: 250 ggtgcagcgccgatcctggggcgagaacctcacgtactacacgggcatcgggtacctctc 309 | |||||||| |||||||||||||||||||| |||||||| ||||| || |||||||| Sbjct: 165 cgcccagcgccgctcctggggcgagaacctcacctactacaccggcataggctacctctc 224 Query: 310 tggcgccgtgggtggcgccgccctcggcctccgcgacgccgccgccggcgcggagcccgg 369 |||||||| | ||||||||| ||||||||||||||||||| | ||| |||||||| Sbjct: 225 gggcgccgtcgccggcgccgccgtcggcctccgcgacgccgcgcgcaacgccgagcccgg 284 Query: 370 ggagaccgccaagatccgcgccaaccgcttgctcaacgcctgcggcagctccggccgacg 429 ||| |||||||||||||| || |||||| | |||||| | ||||||||| |||||| || Sbjct: 285 ggacaccgccaagatccgggcgaaccgcgtcctcaactcgtgcggcagcaacggccgccg 344 Query: 430 ttacggcaacaggctcggngtcattgggctgatgtacgccgggatggagagcg 482 || |||| |||||| ||||| || ||| | ||||||||||| ||||||| Sbjct: 345 catggggaacacgctcggggtcatcggcctgctctacgccgggatcgagagcg 397
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 202 bits (102), Expect = 8e-49 Identities = 245/293 (83%) Strand = Plus / Minus Query: 190 ctacaagaacctctacgacctccccacctcgccggagttcctcttcgaggaggagtccgc 249 ||||||| | |||||||||||||||||||| ||||||||||||||| |||||||||| Sbjct: 827309 ctacaagcagctctacgacctccccacctccccggagttcctcttccaggaggagtcgct 827250 Query: 250 ggtgcagcgccgatcctggggcgagaacctcacgtactacacgggcatcgggtacctctc 309 | |||||||| |||||||||||||||||||| |||||||| ||||| || |||||||| Sbjct: 827249 cgcccagcgccgctcctggggcgagaacctcacctactacaccggcataggctacctctc 827190 Query: 310 tggcgccgtgggtggcgccgccctcggcctccgcgacgccgccgccggcgcggagcccgg 369 |||||||| | ||||||||| ||||||||||||||||||| | ||| |||||||| Sbjct: 827189 gggcgccgtcgccggcgccgccgtcggcctccgcgacgccgcgcgcaacgccgagcccgg 827130 Query: 370 ggagaccgccaagatccgcgccaaccgcttgctcaacgcctgcggcagctccggccgacg 429 ||| |||||||||||||| || |||||| | |||||| | ||||||||| |||||| || Sbjct: 827129 ggacaccgccaagatccgggcgaaccgcgtcctcaactcgtgcggcagcaacggccgccg 827070 Query: 430 ttacggcaacaggctcggngtcattgggctgatgtacgccgggatggagagcg 482 || |||| |||||| ||||| || ||| | ||||||||||| ||||||| Sbjct: 827069 catggggaacacgctcggggtcatcggcctgctctacgccgggatcgagagcg 827017 Score = 56.0 bits (28), Expect = 1e-04 Identities = 46/52 (88%) Strand = Plus / Minus Query: 190 ctacaagaacctctacgacctccccacctcgccggagttcctcttcgaggag 241 ||||||| | ||||| |||||||||||||| | ||||||||||||| ||||| Sbjct: 26464878 ctacaagcagctctatgacctccccacctccctggagttcctcttccaggag 26464827 Score = 46.1 bits (23), Expect = 0.11 Identities = 78/95 (82%), Gaps = 1/95 (1%) Strand = Plus / Minus Query: 323 ggcgccgccctcggcctccgcgacgccgccgccggcgcggagcccggggagaccgccaag 382 ||||||||| ||| |||||||||||||||| | ||| |||||| |||| ||||| ||| Sbjct: 26464760 ggcgccgccgtcgacctccgcgacgccgcccgcaacgccgagccc-gggacaccgctaag 26464702 Query: 383 atccgcgccaaccgcttgctcaacgcctgcggcag 417 ||||| | |||||| | |||||| | |||||||| Sbjct: 26464701 atccgggtgaaccgcatcctcaactcatgcggcag 26464667 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 337 cctccgcgacgccgccgccg 356 |||||||||||||||||||| Sbjct: 33334800 cctccgcgacgccgccgccg 33334819 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 75 ccgccgccgccatggccgac 94 |||||||||||||||||||| Sbjct: 30593015 ccgccgccgccatggccgac 30592996 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 gccgccgccatggccgaccc 96 |||||||||||||||||||| Sbjct: 26730406 gccgccgccatggccgaccc 26730425 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 72 ccaccgccgccgccatggcc 91 |||||||||||||||||||| Sbjct: 13099908 ccaccgccgccgccatggcc 13099927 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 348 ccgccgccggcgcggagccc 367 |||||||||||||||||||| Sbjct: 12369419 ccgccgccggcgcggagccc 12369400 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 340 ccgcgacgccgccgccggcgcgga 363 ||||| |||||||||||||||||| Sbjct: 10961473 ccgcgtcgccgccgccggcgcgga 10961450
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 202 bits (102), Expect = 8e-49 Identities = 245/293 (83%) Strand = Plus / Minus Query: 190 ctacaagaacctctacgacctccccacctcgccggagttcctcttcgaggaggagtccgc 249 ||||||| | |||||||||||||||||||| ||||||||||||||| |||||||||| Sbjct: 827307 ctacaagcagctctacgacctccccacctccccggagttcctcttccaggaggagtcgct 827248 Query: 250 ggtgcagcgccgatcctggggcgagaacctcacgtactacacgggcatcgggtacctctc 309 | |||||||| |||||||||||||||||||| |||||||| ||||| || |||||||| Sbjct: 827247 cgcccagcgccgctcctggggcgagaacctcacctactacaccggcataggctacctctc 827188 Query: 310 tggcgccgtgggtggcgccgccctcggcctccgcgacgccgccgccggcgcggagcccgg 369 |||||||| | ||||||||| ||||||||||||||||||| | ||| |||||||| Sbjct: 827187 gggcgccgtcgccggcgccgccgtcggcctccgcgacgccgcgcgcaacgccgagcccgg 827128 Query: 370 ggagaccgccaagatccgcgccaaccgcttgctcaacgcctgcggcagctccggccgacg 429 ||| |||||||||||||| || |||||| | |||||| | ||||||||| |||||| || Sbjct: 827127 ggacaccgccaagatccgggcgaaccgcgtcctcaactcgtgcggcagcaacggccgccg 827068 Query: 430 ttacggcaacaggctcggngtcattgggctgatgtacgccgggatggagagcg 482 || |||| |||||| ||||| || ||| | ||||||||||| ||||||| Sbjct: 827067 catggggaacacgctcggggtcatcggcctgctctacgccgggatcgagagcg 827015 Score = 56.0 bits (28), Expect = 1e-04 Identities = 46/52 (88%) Strand = Plus / Minus Query: 190 ctacaagaacctctacgacctccccacctcgccggagttcctcttcgaggag 241 ||||||| | ||||| |||||||||||||| | ||||||||||||| ||||| Sbjct: 26556187 ctacaagcagctctatgacctccccacctccctggagttcctcttccaggag 26556136 Score = 46.1 bits (23), Expect = 0.11 Identities = 78/95 (82%), Gaps = 1/95 (1%) Strand = Plus / Minus Query: 323 ggcgccgccctcggcctccgcgacgccgccgccggcgcggagcccggggagaccgccaag 382 ||||||||| ||| |||||||||||||||| | ||| |||||| |||| ||||| ||| Sbjct: 26556069 ggcgccgccgtcgacctccgcgacgccgcccgcaacgccgagccc-gggacaccgctaag 26556011 Query: 383 atccgcgccaaccgcttgctcaacgcctgcggcag 417 ||||| | |||||| | |||||| | |||||||| Sbjct: 26556010 atccgggtgaaccgcatcctcaactcatgcggcag 26555976 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 337 cctccgcgacgccgccgccg 356 |||||||||||||||||||| Sbjct: 33425310 cctccgcgacgccgccgccg 33425329 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 75 ccgccgccgccatggccgac 94 |||||||||||||||||||| Sbjct: 30684437 ccgccgccgccatggccgac 30684418 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 gccgccgccatggccgaccc 96 |||||||||||||||||||| Sbjct: 26821729 gccgccgccatggccgaccc 26821748 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 72 ccaccgccgccgccatggcc 91 |||||||||||||||||||| Sbjct: 13096683 ccaccgccgccgccatggcc 13096702 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 348 ccgccgccggcgcggagccc 367 |||||||||||||||||||| Sbjct: 12366182 ccgccgccggcgcggagccc 12366163 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 340 ccgcgacgccgccgccggcgcgga 363 ||||| |||||||||||||||||| Sbjct: 10959574 ccgcgtcgccgccgccggcgcgga 10959551
>gb|AC134237.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0090O10, complete sequence Length = 162132 Score = 202 bits (102), Expect = 8e-49 Identities = 245/293 (83%) Strand = Plus / Minus Query: 190 ctacaagaacctctacgacctccccacctcgccggagttcctcttcgaggaggagtccgc 249 ||||||| | |||||||||||||||||||| ||||||||||||||| |||||||||| Sbjct: 122854 ctacaagcagctctacgacctccccacctccccggagttcctcttccaggaggagtcgct 122795 Query: 250 ggtgcagcgccgatcctggggcgagaacctcacgtactacacgggcatcgggtacctctc 309 | |||||||| |||||||||||||||||||| |||||||| ||||| || |||||||| Sbjct: 122794 cgcccagcgccgctcctggggcgagaacctcacctactacaccggcataggctacctctc 122735 Query: 310 tggcgccgtgggtggcgccgccctcggcctccgcgacgccgccgccggcgcggagcccgg 369 |||||||| | ||||||||| ||||||||||||||||||| | ||| |||||||| Sbjct: 122734 gggcgccgtcgccggcgccgccgtcggcctccgcgacgccgcgcgcaacgccgagcccgg 122675 Query: 370 ggagaccgccaagatccgcgccaaccgcttgctcaacgcctgcggcagctccggccgacg 429 ||| |||||||||||||| || |||||| | |||||| | ||||||||| |||||| || Sbjct: 122674 ggacaccgccaagatccgggcgaaccgcgtcctcaactcgtgcggcagcaacggccgccg 122615 Query: 430 ttacggcaacaggctcggngtcattgggctgatgtacgccgggatggagagcg 482 || |||| |||||| ||||| || ||| | ||||||||||| ||||||| Sbjct: 122614 catggggaacacgctcggggtcatcggcctgctctacgccgggatcgagagcg 122562
>dbj|AK103851.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033148L11, full insert sequence Length = 1089 Score = 202 bits (102), Expect = 8e-49 Identities = 245/293 (83%) Strand = Plus / Plus Query: 190 ctacaagaacctctacgacctccccacctcgccggagttcctcttcgaggaggagtccgc 249 ||||||| | |||||||||||||||||||| ||||||||||||||| |||||||||| Sbjct: 181 ctacaagcagctctacgacctccccacctccccggagttcctcttccaggaggagtcgct 240 Query: 250 ggtgcagcgccgatcctggggcgagaacctcacgtactacacgggcatcgggtacctctc 309 | |||||||| |||||||||||||||||||| |||||||| ||||| || |||||||| Sbjct: 241 cgcccagcgccgctcctggggcgagaacctcacctactacaccggcataggctacctctc 300 Query: 310 tggcgccgtgggtggcgccgccctcggcctccgcgacgccgccgccggcgcggagcccgg 369 |||||||| | ||||||||| ||||||||||||||||||| | ||| |||||||| Sbjct: 301 gggcgccgtcgccggcgccgccgtcggcctccgcgacgccgcgcgcaacgccgagcccgg 360 Query: 370 ggagaccgccaagatccgcgccaaccgcttgctcaacgcctgcggcagctccggccgacg 429 ||| |||||||||||||| || |||||| | |||||| | ||||||||| |||||| || Sbjct: 361 ggacaccgccaagatccgggcgaaccgcgtcctcaactcgtgcggcagcaacggccgccg 420 Query: 430 ttacggcaacaggctcggngtcattgggctgatgtacgccgggatggagagcg 482 || |||| |||||| ||||| || ||| | ||||||||||| ||||||| Sbjct: 421 catggggaacacgctcggggtcatcggcctgctctacgccgggatcgagagcg 473
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 71.9 bits (36), Expect = 2e-09 Identities = 42/44 (95%) Strand = Plus / Minus Query: 200 ctctacgacctccccacctcgccggagttcctcttcgaggagga 243 ||||||||||| |||||||||||||||| ||||||||||||||| Sbjct: 27377977 ctctacgacctgcccacctcgccggagtgcctcttcgaggagga 27377934 Score = 50.1 bits (25), Expect = 0.007 Identities = 46/53 (86%) Strand = Plus / Minus Query: 264 cctggggcgagaacctcacgtactacacgggcatcgggtacctctctggcgcc 316 ||||||||||||||||||||| |||||| ||| || | |||||| | |||||| Sbjct: 27377913 cctggggcgagaacctcacgttctacaccggcgtcagctacctcgccggcgcc 27377861 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 56 ccaaaccctaaccctaccaccgcc 79 ||||||||||||||||||| |||| Sbjct: 34637240 ccaaaccctaaccctaccatcgcc 34637217 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 75 ccgccgccgccatggccgac 94 |||||||||||||||||||| Sbjct: 34594635 ccgccgccgccatggccgac 34594616 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 accaccgccgccgccatggc 90 |||||||||||||||||||| Sbjct: 34251561 accaccgccgccgccatggc 34251580 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 accaccgccgccgccatggc 90 |||||||||||||||||||| Sbjct: 22393239 accaccgccgccgccatggc 22393258
>dbj|AP004160.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1197_E09 Length = 67368 Score = 71.9 bits (36), Expect = 2e-09 Identities = 42/44 (95%) Strand = Plus / Minus Query: 200 ctctacgacctccccacctcgccggagttcctcttcgaggagga 243 ||||||||||| |||||||||||||||| ||||||||||||||| Sbjct: 23915 ctctacgacctgcccacctcgccggagtgcctcttcgaggagga 23872 Score = 50.1 bits (25), Expect = 0.007 Identities = 46/53 (86%) Strand = Plus / Minus Query: 264 cctggggcgagaacctcacgtactacacgggcatcgggtacctctctggcgcc 316 ||||||||||||||||||||| |||||| ||| || | |||||| | |||||| Sbjct: 23851 cctggggcgagaacctcacgttctacaccggcgtcagctacctcgccggcgcc 23799
>dbj|AP004188.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1493_H11 Length = 106693 Score = 71.9 bits (36), Expect = 2e-09 Identities = 42/44 (95%) Strand = Plus / Minus Query: 200 ctctacgacctccccacctcgccggagttcctcttcgaggagga 243 ||||||||||| |||||||||||||||| ||||||||||||||| Sbjct: 92910 ctctacgacctgcccacctcgccggagtgcctcttcgaggagga 92867 Score = 50.1 bits (25), Expect = 0.007 Identities = 46/53 (86%) Strand = Plus / Minus Query: 264 cctggggcgagaacctcacgtactacacgggcatcgggtacctctctggcgcc 316 ||||||||||||||||||||| |||||| ||| || | |||||| | |||||| Sbjct: 92846 cctggggcgagaacctcacgttctacaccggcgtcagctacctcgccggcgcc 92794
>dbj|AK110845.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-172-B11, full insert sequence Length = 2070 Score = 71.9 bits (36), Expect = 2e-09 Identities = 42/44 (95%) Strand = Plus / Plus Query: 200 ctctacgacctccccacctcgccggagttcctcttcgaggagga 243 ||||||||||| |||||||||||||||| ||||||||||||||| Sbjct: 177 ctctacgacctgcccacctcgccggagtgcctcttcgaggagga 220 Score = 50.1 bits (25), Expect = 0.007 Identities = 46/53 (86%) Strand = Plus / Plus Query: 264 cctggggcgagaacctcacgtactacacgggcatcgggtacctctctggcgcc 316 ||||||||||||||||||||| |||||| ||| || | |||||| | |||||| Sbjct: 241 cctggggcgagaacctcacgttctacaccggcgtcagctacctcgccggcgcc 293
>dbj|AK109266.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-185-B07, full insert sequence Length = 842 Score = 71.9 bits (36), Expect = 2e-09 Identities = 42/44 (95%) Strand = Plus / Plus Query: 200 ctctacgacctccccacctcgccggagttcctcttcgaggagga 243 ||||||||||| |||||||||||||||| ||||||||||||||| Sbjct: 174 ctctacgacctgcccacctcgccggagtgcctcttcgaggagga 217 Score = 50.1 bits (25), Expect = 0.007 Identities = 46/53 (86%) Strand = Plus / Plus Query: 264 cctggggcgagaacctcacgtactacacgggcatcgggtacctctctggcgcc 316 ||||||||||||||||||||| |||||| ||| || | |||||| | |||||| Sbjct: 238 cctggggcgagaacctcacgttctacaccggcgtcagctacctcgccggcgcc 290
>gb|AC079830.9| Oryza sativa chromosome 3 BAC OSJNBb0009F04 genomic sequence, complete sequence Length = 129655 Score = 56.0 bits (28), Expect = 1e-04 Identities = 46/52 (88%) Strand = Plus / Minus Query: 190 ctacaagaacctctacgacctccccacctcgccggagttcctcttcgaggag 241 ||||||| | ||||| |||||||||||||| | ||||||||||||| ||||| Sbjct: 112918 ctacaagcagctctatgacctccccacctccctggagttcctcttccaggag 112867 Score = 46.1 bits (23), Expect = 0.11 Identities = 78/95 (82%), Gaps = 1/95 (1%) Strand = Plus / Minus Query: 323 ggcgccgccctcggcctccgcgacgccgccgccggcgcggagcccggggagaccgccaag 382 ||||||||| ||| |||||||||||||||| | ||| |||||| |||| ||||| ||| Sbjct: 112800 ggcgccgccgtcgacctccgcgacgccgcccgcaacgccgagccc-gggacaccgctaag 112742 Query: 383 atccgcgccaaccgcttgctcaacgcctgcggcag 417 ||||| | |||||| | |||||| | |||||||| Sbjct: 112741 atccgggtgaaccgcatcctcaactcatgcggcag 112707
>ref|XM_469269.1| Oryza sativa (japonica cultivar-group), mRNA Length = 426 Score = 56.0 bits (28), Expect = 1e-04 Identities = 46/52 (88%) Strand = Plus / Plus Query: 190 ctacaagaacctctacgacctccccacctcgccggagttcctcttcgaggag 241 ||||||| | ||||| |||||||||||||| | ||||||||||||| ||||| Sbjct: 93 ctacaagcagctctatgacctccccacctccctggagttcctcttccaggag 144
>ref|XM_473531.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 564 Score = 50.1 bits (25), Expect = 0.007 Identities = 40/45 (88%) Strand = Plus / Plus Query: 200 ctctacgacctccccacctcgccggagttcctcttcgaggaggag 244 ||||||||||| || ||||||||||||||||| ||| | |||||| Sbjct: 100 ctctacgacctgccgacctcgccggagttcctgttccacgaggag 144
>emb|AL662954.2|OSJN00155 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0005N02, complete sequence Length = 175163 Score = 50.1 bits (25), Expect = 0.007 Identities = 40/45 (88%) Strand = Plus / Minus Query: 200 ctctacgacctccccacctcgccggagttcctcttcgaggaggag 244 ||||||||||| || ||||||||||||||||| ||| | |||||| Sbjct: 102170 ctctacgacctgccgacctcgccggagttcctgttccacgaggag 102126
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 50.1 bits (25), Expect = 0.007 Identities = 40/45 (88%) Strand = Plus / Minus Query: 200 ctctacgacctccccacctcgccggagttcctcttcgaggaggag 244 ||||||||||| || ||||||||||||||||| ||| | |||||| Sbjct: 28453495 ctctacgacctgccgacctcgccggagttcctgttccacgaggag 28453451 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Plus Query: 331 cctcggcctccgcgacgccgccgccg 356 |||||||||||||| ||||||||||| Sbjct: 19501240 cctcggcctccgcgccgccgccgccg 19501265 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 72 ccaccgccgccgccatggccg 92 ||||||||||||||||||||| Sbjct: 5078200 ccaccgccgccgccatggccg 5078180 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 336 gcctccgcgacgccgccgccggcg 359 ||||||||| |||||||||||||| Sbjct: 34458586 gcctccgcgtcgccgccgccggcg 34458609 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 340 ccgcgacgccgccgccggcg 359 |||||||||||||||||||| Sbjct: 25432435 ccgcgacgccgccgccggcg 25432454
>dbj|AK108551.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-144-E05, full insert sequence Length = 851 Score = 50.1 bits (25), Expect = 0.007 Identities = 40/45 (88%) Strand = Plus / Plus Query: 200 ctctacgacctccccacctcgccggagttcctcttcgaggaggag 244 ||||||||||| || ||||||||||||||||| ||| | |||||| Sbjct: 130 ctctacgacctgccgacctcgccggagttcctgttccacgaggag 174
>gb|BT013350.1| Lycopersicon esculentum clone 135295R, mRNA sequence Length = 787 Score = 48.1 bits (24), Expect = 0.027 Identities = 48/56 (85%) Strand = Plus / Plus Query: 254 cagcgccgatcctggggcgagaacctcacgtactacacgggcatcgggtacctctc 309 ||||||||||| ||||| || ||||| |||| |||||| |||||||| || ||||| Sbjct: 201 cagcgccgatcgtggggagaaaacctaacgttctacactggcatcggttatctctc 256
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 337 cctccgcgacgccgccgccggcg 359 ||||||||||||||||||||||| Sbjct: 24215292 cctccgcgacgccgccgccggcg 24215270 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 337 cctccgcgacgccgccgccggcgc 360 ||||||||||||||||| |||||| Sbjct: 24190071 cctccgcgacgccgccggcggcgc 24190048 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 75 ccgccgccgccatggccgac 94 |||||||||||||||||||| Sbjct: 18349078 ccgccgccgccatggccgac 18349097
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Minus Query: 332 ctcggcctccgcgacgccgccgccggcgcgg 362 ||||||||| ||| ||||||||||||||||| Sbjct: 4545051 ctcggcctcggcggcgccgccgccggcgcgg 4545021 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 342 gcgacgccgccgccggcgcg 361 |||||||||||||||||||| Sbjct: 4168719 gcgacgccgccgccggcgcg 4168738
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 337 cctccgcgacgccgccgccggcg 359 ||||||||||||||||||||||| Sbjct: 24143498 cctccgcgacgccgccgccggcg 24143476 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 337 cctccgcgacgccgccgccggcgc 360 ||||||||||||||||| |||||| Sbjct: 24118277 cctccgcgacgccgccggcggcgc 24118254 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 75 ccgccgccgccatggccgac 94 |||||||||||||||||||| Sbjct: 18275399 ccgccgccgccatggccgac 18275418
>emb|AL772426.5|CNS08CA4 Oryza sativa chromosome 12, . BAC OJ1310_C03 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 132733 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 337 cctccgcgacgccgccgccggcg 359 ||||||||||||||||||||||| Sbjct: 99983 cctccgcgacgccgccgccggcg 99961 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 337 cctccgcgacgccgccgccggcgc 360 ||||||||||||||||| |||||| Sbjct: 74762 cctccgcgacgccgccggcggcgc 74739
>ref|XM_472327.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 567 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Plus Query: 331 cctcggcctccgcgacgccgccgccg 356 |||||||||||||| ||||||||||| Sbjct: 33 cctcggcctccgcgccgccgccgccg 58
>gb|CP000354.1| Ralstonia metallidurans CH34 plasmid pMOL30, complete sequence Length = 233720 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 329 gccctcggcctccgcgacgccg 350 |||||||||||||||||||||| Sbjct: 184041 gccctcggcctccgcgacgccg 184020
>ref|XM_531662.2| PREDICTED: Canis familiaris similar to Z-protein (S1R protein) (LOC474432), mRNA Length = 822 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 75 ccgccgccgccatggccgaccc 96 |||||||||||||||||||||| Sbjct: 35 ccgccgccgccatggccgaccc 56
>emb|X71400.2|AECZCOP5R Ralstonia metallidurans CH34 plasmid pMOL30 Length = 233755 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 329 gccctcggcctccgcgacgccg 350 |||||||||||||||||||||| Sbjct: 169531 gccctcggcctccgcgacgccg 169552
>gb|AC169376.2| Sorghum bicolor clone SB_BBc0046M17, complete sequence Length = 127914 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 71 accaccgccgccgccatggccg 92 |||||||||||||||||||||| Sbjct: 94254 accaccgccgccgccatggccg 94275
>tpg|BK004006.1| TPA: TPA_inf: Gallus gallus RTN3w (RTN3) mRNA, partial cds Length = 655 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 75 ccgccgccgccatggccgaccc 96 |||||||||||||||||||||| Sbjct: 39 ccgccgccgccatggccgaccc 60
>emb|AL662997.3|OSJN00205 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0039F02, complete sequence Length = 122499 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Plus Query: 331 cctcggcctccgcgacgccgccgccg 356 |||||||||||||| ||||||||||| Sbjct: 21887 cctcggcctccgcgccgccgccgccg 21912
>dbj|AK107750.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-132-H08, full insert sequence Length = 919 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Plus Query: 331 cctcggcctccgcgacgccgccgccg 356 |||||||||||||| ||||||||||| Sbjct: 79 cctcggcctccgcgccgccgccgccg 104
>gb|AY387684.1| Oryza sativa (indica cultivar-group) harpin binding protein 1 (HrBP1-2) mRNA, complete cds Length = 1112 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 72 ccaccgccgccgccatggccg 92 ||||||||||||||||||||| Sbjct: 102 ccaccgccgccgccatggccg 82
>gb|AY387683.1| Oryza sativa (indica cultivar-group) harpin binding protein 1 (HrBP1-1) mRNA, complete cds Length = 1123 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 72 ccaccgccgccgccatggccg 92 ||||||||||||||||||||| Sbjct: 101 ccaccgccgccgccatggccg 81
>gb|AC108762.2| Oryza sativa (japonica cultivar-group) chromosome 9 clone OSJNBb0052C07, complete sequence Length = 154528 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 71 accaccgccgccgccatggcc 91 ||||||||||||||||||||| Sbjct: 49424 accaccgccgccgccatggcc 49444
>ref|NM_189629.1| Oryza sativa (japonica cultivar-group), Ozsa8057 predicted mRNA Length = 1716 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 72 ccaccgccgccgccatggccg 92 ||||||||||||||||||||| Sbjct: 637 ccaccgccgccgccatggccg 617
>ref|XM_474637.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1674 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 72 ccaccgccgccgccatggccg 92 ||||||||||||||||||||| Sbjct: 147 ccaccgccgccgccatggccg 167
>ref|NM_196516.1| Oryza sativa (japonica cultivar-group) putative calcium-transporting ATPase (OSJNBa0061K21.21), mRNA Length = 3108 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 338 ctccgcgacgccgccgccggcgcgg 362 ||||||||||||||| ||||||||| Sbjct: 1696 ctccgcgacgccgccaccggcgcgg 1720
>gb|AC144700.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0017H17, complete sequence Length = 156331 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 72 ccaccgccgccgccatggccg 92 ||||||||||||||||||||| Sbjct: 17539 ccaccgccgccgccatggccg 17519
>gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 complete genome Length = 6397126 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 255 agcgccgatcctggggcgagaacctcacg 283 ||||||| |||||||||||||||||||| Sbjct: 156128 agcgccgcgcctggggcgagaacctcacg 156156
>ref|XM_753960.1| Ustilago maydis 521 hypothetical protein (UM02906.1) partial mRNA Length = 1467 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 375 ccgccaagatccgcgccaacc 395 ||||||||||||||||||||| Sbjct: 1376 ccgccaagatccgcgccaacc 1396
>gb|AC137744.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0074L11, complete sequence Length = 180703 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 72 ccaccgccgccgccatggccg 92 ||||||||||||||||||||| Sbjct: 158749 ccaccgccgccgccatggccg 158729
>gb|AE008761.1| Salmonella typhimurium LT2, section 65 of 220 of the complete genome Length = 27863 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 305 ctctctggcgccgtgggtggc 325 ||||||||||||||||||||| Sbjct: 1261 ctctctggcgccgtgggtggc 1241
>emb|AL731589.3|OSJN00239 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0039G19, complete sequence Length = 144144 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 72 ccaccgccgccgccatggccg 92 ||||||||||||||||||||| Sbjct: 54473 ccaccgccgccgccatggccg 54453
>emb|AL627271.1| Salmonella enterica serovar Typhi (Salmonella typhi) strain CT18, complete chromosome; segment 7/20 Length = 233050 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 305 ctctctggcgccgtgggtggc 325 ||||||||||||||||||||| Sbjct: 78676 ctctctggcgccgtgggtggc 78696
>emb|AJ224978.1|STY224978 Salmonella typhimurium, Salmonella Pathogenicity Island 2 (SPI2) genes, ttr gene cluster Length = 12121 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 305 ctctctggcgccgtgggtggc 325 ||||||||||||||||||||| Sbjct: 1040 ctctctggcgccgtgggtggc 1060
>gb|AF156984.1| Colletotrichum gloeosporioides f. sp. malvae pectin lyase 2 (pnl-2) mRNA, complete cds Length = 1414 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 400 gctcaacgcctgcggcagctccggc 424 ||||||||||| ||||||||||||| Sbjct: 1089 gctcaacgcctacggcagctccggc 1113
>gb|AE005766.1| Caulobacter crescentus CB15 section 92 of 359 of the complete genome Length = 10091 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 71 accaccgccgccgccatggccgacc 95 |||||||||||| |||||||||||| Sbjct: 4568 accaccgccgccaccatggccgacc 4544
>gb|AC016780.6| Genomic Sequence For Oryza sativa (japonica cultivar-group) cultivar Nipponbare Clone OSJNBa0061K21 From Chromosome 10, complete sequence Length = 112721 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 338 ctccgcgacgccgccgccggcgcgg 362 ||||||||||||||| ||||||||| Sbjct: 108892 ctccgcgacgccgccaccggcgcgg 108868
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 72 ccaccgccgccgccatggccg 92 ||||||||||||||||||||| Sbjct: 21806696 ccaccgccgccgccatggccg 21806676
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 75 ccgccgccgccatggccgacc 95 ||||||||||||||||||||| Sbjct: 5398010 ccgccgccgccatggccgacc 5397990 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 325 cgccgccctcggcctccgcg 344 |||||||||||||||||||| Sbjct: 26326847 cgccgccctcggcctccgcg 26326828
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 72 ccaccgccgccgccatggccg 92 ||||||||||||||||||||| Sbjct: 4645823 ccaccgccgccgccatggccg 4645803 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 333 tcggcctccgcgacgccgccgccg 356 ||||||||||| |||||||||||| Sbjct: 38017019 tcggcctccgccacgccgccgccg 38017042
>gb|AC027658.1| Oryza sativa (japonica cultivar-group) BAC nbxb0006I13 chromosome 10, complete sequence Length = 142737 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 338 ctccgcgacgccgccgccggcgcgg 362 ||||||||||||||| ||||||||| Sbjct: 41437 ctccgcgacgccgccaccggcgcgg 41413
>dbj|AP005441.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0056O06 Length = 151038 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 75 ccgccgccgccatggccgacc 95 ||||||||||||||||||||| Sbjct: 67821 ccgccgccgccatggccgacc 67801
>dbj|AP002836.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0512G09 Length = 146921 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 72 ccaccgccgccgccatggccg 92 ||||||||||||||||||||| Sbjct: 6068 ccaccgccgccgccatggccg 6048
>dbj|AP002816.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0695A04 Length = 158133 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 72 ccaccgccgccgccatggccg 92 ||||||||||||||||||||| Sbjct: 53039 ccaccgccgccgccatggccg 53019
>dbj|AK106168.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-208-B09, full insert sequence Length = 1205 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 72 ccaccgccgccgccatggccg 92 ||||||||||||||||||||| Sbjct: 72 ccaccgccgccgccatggccg 52
>dbj|AK106159.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-208-A08, full insert sequence Length = 1265 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 72 ccaccgccgccgccatggccg 92 ||||||||||||||||||||| Sbjct: 198 ccaccgccgccgccatggccg 178
>dbj|AK105331.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-118-C05, full insert sequence Length = 1182 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 72 ccaccgccgccgccatggccg 92 ||||||||||||||||||||| Sbjct: 390 ccaccgccgccgccatggccg 370
>dbj|AK105323.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-117-G12, full insert sequence Length = 1523 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 72 ccaccgccgccgccatggccg 92 ||||||||||||||||||||| Sbjct: 390 ccaccgccgccgccatggccg 370
>dbj|AK071115.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023080K06, full insert sequence Length = 1186 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 72 ccaccgccgccgccatggccg 92 ||||||||||||||||||||| Sbjct: 181 ccaccgccgccgccatggccg 161
>dbj|AK069787.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023030H18, full insert sequence Length = 2362 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 71 accaccgccgccgccatggcc 91 ||||||||||||||||||||| Sbjct: 104 accaccgccgccgccatggcc 124
>gb|AE014613.1| Salmonella enterica subsp. enterica serovar Typhi Ty2, complete genome Length = 4791961 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 305 ctctctggcgccgtgggtggc 325 ||||||||||||||||||||| Sbjct: 1329460 ctctctggcgccgtgggtggc 1329440
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 345 acgccgccgccggcgcggagc 365 ||||||||||||||||||||| Sbjct: 1131476 acgccgccgccggcgcggagc 1131496
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 72 ccaccgccgccgccatggccg 92 ||||||||||||||||||||| Sbjct: 22116895 ccaccgccgccgccatggccg 22116875
>gb|AC136520.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0017O06, complete sequence Length = 151656 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 accaccgccgccgccatggc 90 |||||||||||||||||||| Sbjct: 133805 accaccgccgccgccatggc 133824
>ref|XM_483458.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1629 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 325 cgccgccctcggcctccgcg 344 |||||||||||||||||||| Sbjct: 1050 cgccgccctcggcctccgcg 1069
>ref|XM_470012.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1912 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 337 cctccgcgacgccgccgccg 356 |||||||||||||||||||| Sbjct: 113 cctccgcgacgccgccgccg 132
>gb|DQ214992.1| Taeniopygia guttata clone 0065P0004C06 tubulin-specific chaperone A (tubulin-folding cofactor A)-like mRNA, complete sequence Length = 518 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 gccgccgccatggccgaccc 96 |||||||||||||||||||| Sbjct: 7 gccgccgccatggccgaccc 26
>gb|DQ214991.1| Taeniopygia guttata clone 0058P0011A09 tubulin-specific chaperone A (tubulin-folding cofactor A)-like mRNA, complete sequence Length = 524 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 gccgccgccatggccgaccc 96 |||||||||||||||||||| Sbjct: 5 gccgccgccatggccgaccc 24
>gb|DQ214990.1| Taeniopygia guttata clone 0058P0020A07 tubulin-specific chaperone A (tubulin-folding cofactor A)-like mRNA, complete sequence Length = 518 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 gccgccgccatggccgaccc 96 |||||||||||||||||||| Sbjct: 11 gccgccgccatggccgaccc 30
>gb|DQ214989.1| Taeniopygia guttata clone 0058P0016C06 tubulin-specific chaperone A (tubulin-folding cofactor A)-like mRNA, complete sequence Length = 1426 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 gccgccgccatggccgaccc 96 |||||||||||||||||||| Sbjct: 5 gccgccgccatggccgaccc 24
>gb|DQ214988.1| Taeniopygia guttata clone 0058P0019H04 tubulin-specific chaperone A (tubulin-folding cofactor A)-like mRNA, complete sequence Length = 424 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 gccgccgccatggccgaccc 96 |||||||||||||||||||| Sbjct: 23 gccgccgccatggccgaccc 42
>gb|DQ214987.1| Taeniopygia guttata clone 0058P0044G01 tubulin-specific chaperone A (tubulin-folding cofactor A)-like mRNA, complete sequence Length = 406 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 gccgccgccatggccgaccc 96 |||||||||||||||||||| Sbjct: 5 gccgccgccatggccgaccc 24
>gb|DQ214986.1| Taeniopygia guttata clone 0065P0015D09 tubulin-specific chaperone A (tubulin-folding cofactor A)-like mRNA, complete sequence Length = 1440 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 gccgccgccatggccgaccc 96 |||||||||||||||||||| Sbjct: 21 gccgccgccatggccgaccc 40
>gb|DQ213694.1| Taeniopygia guttata clone 0058P0058F04 phosphopantothenate-cysteine ligase-like mRNA, complete sequence Length = 1287 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 73 caccgccgccgccatggccg 92 |||||||||||||||||||| Sbjct: 38 caccgccgccgccatggccg 19
>ref|XM_518396.1| PREDICTED: Pan troglodytes similar to Ring finger protein 1 (LOC462604), mRNA Length = 2484 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 72 ccaccgccgccgccatggcc 91 |||||||||||||||||||| Sbjct: 1199 ccaccgccgccgccatggcc 1180
>ref|NM_190120.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1089 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 333 tcggcctccgcgacgccgccgccg 356 ||||||||||| |||||||||||| Sbjct: 278 tcggcctccgccacgccgccgccg 255
>ref|NM_194111.1| Oryza sativa (japonica cultivar-group), mRNA Length = 318 Score = 40.1 bits (20), Expect = 6.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 334 cggcctccgcgacgccgccgccggcgcg 361 ||||| ||||| |||||||||||||||| Sbjct: 273 cggccgccgcgccgccgccgccggcgcg 246
>ref|XM_473126.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2271 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 340 ccgcgacgccgccgccggcg 359 |||||||||||||||||||| Sbjct: 1970 ccgcgacgccgccgccggcg 1989
>gb|AY023278.1| Oryza sativa microsatellite MRG5603 containing (GGC)X8, closest to marker R707, genomic sequence Length = 224 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 337 cctccgcgacgccgccgccg 356 |||||||||||||||||||| Sbjct: 134 cctccgcgacgccgccgccg 115
>gb|AY023268.1| Oryza sativa microsatellite MRG5593 containing (GGC)X8, closest to marker C1439, genomic sequence Length = 224 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 333 tcggcctccgcgacgccgccgccg 356 ||||||||||| |||||||||||| Sbjct: 204 tcggcctccgccacgccgccgccg 181
>gb|AC079736.13| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0003G23, complete sequence Length = 135931 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 77 gccgccgccatggccgaccc 96 |||||||||||||||||||| Sbjct: 103806 gccgccgccatggccgaccc 103787
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 70 taccaccgccgccgccatggccga 93 |||||||| ||||||||||||||| Sbjct: 2792210 taccaccggcgccgccatggccga 2792233
>gb|AC130732.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0708D12, complete sequence Length = 172647 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 accaccgccgccgccatggc 90 |||||||||||||||||||| Sbjct: 16591 accaccgccgccgccatggc 16610
>ref|NM_002931.3| Homo sapiens ring finger protein 1 (RING1), mRNA Length = 1744 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 72 ccaccgccgccgccatggcc 91 |||||||||||||||||||| Sbjct: 29 ccaccgccgccgccatggcc 10
>gb|AC164179.7| Mus musculus 10 BAC RP24-63J23 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 209011 Score = 40.1 bits (20), Expect = 6.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 346 cgccgccgccggcgcggagcccggggag 373 ||||||||||| ||||||||||| |||| Sbjct: 13138 cgccgccgccgccgcggagcccgcggag 13165
>gb|AC135563.5| Oryza sativa chromosome 3 BAC OSJNBb0015I02 genomic sequence, complete sequence Length = 122815 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 337 cctccgcgacgccgccgccg 356 |||||||||||||||||||| Sbjct: 91316 cctccgcgacgccgccgccg 91335
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome Length = 5178466 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 73 caccgccgccgccatggccg 92 |||||||||||||||||||| Sbjct: 365309 caccgccgccgccatggccg 365328
>gb|AC135257.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OJ1113A07, from chromosome 3, complete sequence Length = 151173 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 72 ccaccgccgccgccatggcc 91 |||||||||||||||||||| Sbjct: 126730 ccaccgccgccgccatggcc 126711
>emb|AL844527.6| Human DNA sequence from clone DAQB-314F24 on chromosome 6 Contains the 5' end of the COL11A2 gene for collagen type XI alpha 2, the RXRB gene for retinoid X receptor, beta, the SLC39A7 gene for solute carrier family 39 (zinc transporter), member 7, the HSD17B8 gene for hydroxysteroid (17-beta) dehydrogenase 8, the RING1 gene for ring finger protein 1, the ZNF314P pseudogene for zinc finger protein 314, the HTATSF1P pseudogene for HIV TAT specific factor 1, the HCG25 gene for HLA complex group 25, the VPS52 gene for vacuolar protein sorting 52 (yeast), the RPS18 gene for ribosomal protein S18, the B3GALT4 gene for UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 4, the 3'end of the C6orf11 gene for chromosome 6 open reading frame 11, and 7 CpG islands, complete sequence Length = 109523 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 72 ccaccgccgccgccatggcc 91 |||||||||||||||||||| Sbjct: 36998 ccaccgccgccgccatggcc 36979
>emb|AL713971.7| Human DNA sequence from clone XXbac-269C15 on chromosome 6 contains the FABGL gene for hydroxysteroid (17-beta) dehydrogenase 8, the RING1 gene for ring finger protein 1, a zinger finger protein pseudogene, a HIV TAT specific factor 1 (HTATSF1) pseudogene, a novel transcript, the SACML2 gene for SAC2 suppressor of actin mutations 2-like (yeast), the 5' end of the RPS18 gene for ribosomal protein S18 and four CpG islands, complete sequence Length = 70621 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 72 ccaccgccgccgccatggcc 91 |||||||||||||||||||| Sbjct: 4188 ccaccgccgccgccatggcc 4169
>emb|AL645940.4| Human DNA sequence from clone XXbac-157A10 on chromosome 6 contains the 3' end of the gene for a novel protein similar to major histocompatibility complex, class II, DP beta 2 pseudogene, a major histocompatibility complex, class II, DP beta 1 pseudogene, two putative novel transcripts, the COL11A2 gene for collagen, type XI, alpha 2, the RXRB gene for retinoid X receptor, beta, the HKE4 gene for HLA-class II region expressed gene KE4, the FABGL gene for hydroxysteroid (17-beta) dehydrogenase 8, the RING1 gene for ring finger protein 1, a zinger finger protein pseudogene, a HIV TAT specific factor 1 (HTATSF1) pseudogene, a novel transcript, the SACM2L gene for SAC2 suppressor of actin mutations 2-like (yeast), the 5' end of the RPS18 gene for ribosomal protein S18 and six CpG islands, complete sequence Length = 158033 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 72 ccaccgccgccgccatggcc 91 |||||||||||||||||||| Sbjct: 93574 ccaccgccgccgccatggcc 93555
>gb|AC134769.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OJ1145F05, from chromosome 3, complete sequence Length = 127348 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 340 ccgcgacgccgccgccggcgcgga 363 ||||| |||||||||||||||||| Sbjct: 19556 ccgcgtcgccgccgccggcgcgga 19579
>emb|AL031228.1|HS1033B10 Human DNA sequence from clone RP5-1033B10 on chromosome 6p21.2-21.31 Contains the 3' end of the C6ORF11 gene for chromosome 6 open reading frame 11 (BING4), the B3GALT4 gene for UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase polypeptide 4 (GalT4,Gal-T2,beta3GALT4,beta3Gal-T4), the RPS18 gene for 40S ribosomal protein S18 (KE3,HKE3,KE-3), the SACM2L gene for SAC2 suppressor of actin mutations 2-like (yeast)(ARE1,SAC2,ARE-1,RP5-1033B10), a pseudogene similar to part of HTATSF1 (HIV TAT specific factor 1), the RING1 gene for ring finger protein 1 (RNF1), the HSD17B8 gene for hydroxysteroid (17-beta) dehydrogenase 8 (KE6,FABG,HKE6,FABGL,RING2,H2-KE6,D6S2245E), the HKE4 gene for HLA class II region protein KE4 (KE4,RING5,H2-KE4,D6S115E,D6S2244E), the RXRB gene for retinoid X receptor beta (NR2B2,RCoR-1,H-2RIIBP), the COL11A2 gene for collagen type XI alpha 2 (HKE5,PARP,STL3,DFNA13), an HLA class II histocompatability antigen D or S beta pseudogene,the gene for a novel protein similar to major histocompatibility complex class II DP beta 1 precursor, three novel genes and seven CpG islands, complete sequence Length = 175737 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 72 ccaccgccgccgccatggcc 91 |||||||||||||||||||| Sbjct: 77691 ccaccgccgccgccatggcc 77710
>gb|AY136627.1| Hordeum vulgare subsp. vulgare plasma membrane P-type proton pump ATPase (Ha1) mRNA, complete cds Length = 3446 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 75 ccgccgccgccatggccgac 94 |||||||||||||||||||| Sbjct: 171 ccgccgccgccatggccgac 190
>emb|X59045.1|BMCGTM B.macerans cgtM gene for cyclodextrin glucotransferase Length = 2631 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 191 tacaagaacctctacgacct 210 |||||||||||||||||||| Sbjct: 815 tacaagaacctctacgacct 834
>emb|BX883042.1| Rattus norvegicus chromosome 20, major histocompatibility complex, assembled from 40 BACs, strain Brown Norway (BN/ssNHsd), RT1n haplotype; segment 1/11 Length = 348780 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 72 ccaccgccgccgccatggcc 91 |||||||||||||||||||| Sbjct: 231049 ccaccgccgccgccatggcc 231068
>emb|BX842580.1| Mycobacterium tuberculosis H37Rv complete genome; segment 9/13 Length = 346051 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 70 taccaccgccgccgccatggccga 93 |||||||| ||||||||||||||| Sbjct: 23686 taccaccggcgccgccatggccga 23709
>emb|BX248342.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 9/14 Length = 306550 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 70 taccaccgccgccgccatggccga 93 |||||||| ||||||||||||||| Sbjct: 252522 taccaccggcgccgccatggccga 252545
>emb|AL939113.1|SCO939113 Streptomyces coelicolor A3(2) complete genome; segment 10/29 Length = 310550 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 131 gaccacgcccccggccgccg 150 |||||||||||||||||||| Sbjct: 271748 gaccacgcccccggccgccg 271729
>emb|AL662969.3|OSJN00169 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0043L24, complete sequence Length = 164577 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 340 ccgcgacgccgccgccggcg 359 |||||||||||||||||||| Sbjct: 158993 ccgcgacgccgccgccggcg 159012
>emb|AL606607.3|OSJN00068 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0065L13, complete sequence Length = 103039 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 340 ccgcgacgccgccgccggcg 359 |||||||||||||||||||| Sbjct: 9928 ccgcgacgccgccgccggcg 9947
>emb|AL606457.3|OSJN00002 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0018M05, complete sequence Length = 164943 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 336 gcctccgcgacgccgccgccggcg 359 ||||||||| |||||||||||||| Sbjct: 76071 gcctccgcgtcgccgccgccggcg 76094
>emb|AJ421778.1|MMU421778 Macaca mulatta znfl gene (partial), sacm2L gene (partial), htatsf1L gene (partial), ring1 gene, fabgl gene and ke4 gene (partial) Length = 67401 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 72 ccaccgccgccgccatggcc 91 |||||||||||||||||||| Sbjct: 62261 ccaccgccgccgccatggcc 62280
>emb|CR847841.4| Human DNA sequence from clone DAMA-222K3 on chromosome 6, complete sequence Length = 8399 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 72 ccaccgccgccgccatggcc 91 |||||||||||||||||||| Sbjct: 6648 ccaccgccgccgccatggcc 6629
>gb|BC051866.2| Homo sapiens ring finger protein 1, mRNA (cDNA clone MGC:60237 IMAGE:6142438), complete cds Length = 1739 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 72 ccaccgccgccgccatggcc 91 |||||||||||||||||||| Sbjct: 22 ccaccgccgccgccatggcc 3
>emb|CR547129.3| Human DNA sequence from clone DAMA-258A19 on chromosome 6, complete sequence Length = 49878 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 72 ccaccgccgccgccatggcc 91 |||||||||||||||||||| Sbjct: 249 ccaccgccgccgccatggcc 230
>gb|AC125496.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0098H14, complete sequence Length = 132560 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 348 ccgccgccggcgcggagccc 367 |||||||||||||||||||| Sbjct: 28437 ccgccgccggcgcggagccc 28418
>emb|CR759786.5| Human DNA sequence from clone DAMC-227D19 on chromosome 6, complete sequence Length = 123399 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 72 ccaccgccgccgccatggcc 91 |||||||||||||||||||| Sbjct: 7260 ccaccgccgccgccatggcc 7241
>emb|CR759733.4| Human DNA sequence from clone DADB-100D22 on chromosome 6, complete sequence Length = 104205 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 72 ccaccgccgccgccatggcc 91 |||||||||||||||||||| Sbjct: 80827 ccaccgccgccgccatggcc 80808
>ref|NM_031828.1| Rattus norvegicus potassium large conductance calcium-activated channel, subfamily M, alpha member 1 (Kcnma1), mRNA Length = 5453 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 347 gccgccgccggcgcggagcccggg 370 |||||||||| ||||||||||||| Sbjct: 394 gccgccgccgccgcggagcccggg 371
>emb|CR624041.1| full-length cDNA clone CS0DB005YB16 of Neuroblastoma Cot 10-normalized of Homo sapiens (human) Length = 1708 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 72 ccaccgccgccgccatggcc 91 |||||||||||||||||||| Sbjct: 26 ccaccgccgccgccatggcc 7
>emb|CR606762.1| full-length cDNA clone CS0DK001YE22 of HeLa cells Cot 25-normalized of Homo sapiens (human) Length = 1692 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 72 ccaccgccgccgccatggcc 91 |||||||||||||||||||| Sbjct: 29 ccaccgccgccgccatggcc 10
>emb|CR604365.1| full-length cDNA clone CS0DI076YE14 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1701 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 72 ccaccgccgccgccatggcc 91 |||||||||||||||||||| Sbjct: 29 ccaccgccgccgccatggcc 10
>emb|CR598354.1| full-length cDNA clone CS0DF008YB19 of Fetal brain of Homo sapiens (human) Length = 1658 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 72 ccaccgccgccgccatggcc 91 |||||||||||||||||||| Sbjct: 41 ccaccgccgccgccatggcc 22
>gb|AE011656.1| Xanthomonas axonopodis pv. citri str. 306, section 34 of 469 of the complete genome Length = 10029 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 73 caccgccgccgccatggccg 92 |||||||||||||||||||| Sbjct: 3824 caccgccgccgccatggccg 3843
>emb|CR594955.1| full-length cDNA clone CS0DL001YL13 of B cells (Ramos cell line) Cot 25-normalized of Homo sapiens (human) Length = 1687 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 72 ccaccgccgccgccatggcc 91 |||||||||||||||||||| Sbjct: 23 ccaccgccgccgccatggcc 4
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 accaccgccgccgccatggc 90 |||||||||||||||||||| Sbjct: 3673464 accaccgccgccgccatggc 3673445
>gb|AC087182.12| Oryza sativa chromosome 10 BAC OSJNBa0029C15 genomic sequence, complete sequence Length = 148816 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 75 ccgccgccgccatggccgac 94 |||||||||||||||||||| Sbjct: 86749 ccgccgccgccatggccgac 86730
>gb|AC091811.7| Oryza sativa chromosome 3 BAC OSJNBa0069E14 genomic sequence, complete sequence Length = 139872 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 75 ccgccgccgccatggccgac 94 |||||||||||||||||||| Sbjct: 124588 ccgccgccgccatggccgac 124569
>gb|AC021893.18|AC021893 Genomic Sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0060A14, from chromosome 10, complete sequence Length = 151343 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 75 ccgccgccgccatggccgac 94 |||||||||||||||||||| Sbjct: 97077 ccgccgccgccatggccgac 97096
>emb|BX248230.21| Zebrafish DNA sequence from clone CH211-213O11 in linkage group 11, complete sequence Length = 217432 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 54 caccaaaccctaaccctacc 73 |||||||||||||||||||| Sbjct: 11063 caccaaaccctaaccctacc 11044
>gb|AC157995.2| Mus musculus BAC clone RP24-364K9 from chromosome 9, complete sequence Length = 181542 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 307 ctctggcgccgtgggtggcg 326 |||||||||||||||||||| Sbjct: 105729 ctctggcgccgtgggtggcg 105748
>dbj|AK049438.1| Mus musculus 7 days embryo whole body cDNA, RIKEN full-length enriched library, clone:C430011F04 product:unclassifiable, full insert sequence Length = 2690 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 307 ctctggcgccgtgggtggcg 326 |||||||||||||||||||| Sbjct: 1522 ctctggcgccgtgggtggcg 1503
>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome Length = 2909809 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 341 cgcgacgccgccgccggcgc 360 |||||||||||||||||||| Sbjct: 625960 cgcgacgccgccgccggcgc 625941
>gb|AC148707.1| Macaca mulatta Major Histocompatibility Complex BAC MMU380B12, complete sequence Length = 171055 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 72 ccaccgccgccgccatggcc 91 |||||||||||||||||||| Sbjct: 25149 ccaccgccgccgccatggcc 25130
>gb|AC148674.1| Macaca mulatta Major Histocompatibility Complex BAC MMU103F20, complete sequence Length = 174172 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 72 ccaccgccgccgccatggcc 91 |||||||||||||||||||| Sbjct: 117710 ccaccgccgccgccatggcc 117691
>gb|AC153516.8| Mus musculus 10 BAC RP23-390D8 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 197506 Score = 40.1 bits (20), Expect = 6.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 346 cgccgccgccggcgcggagcccggggag 373 ||||||||||| ||||||||||| |||| Sbjct: 66148 cgccgccgccgccgcggagcccgcggag 66121
>emb|BX649289.11| Zebrafish DNA sequence from clone DKEY-231H5 in linkage group 20, complete sequence Length = 124708 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 54 caccaaaccctaaccctacc 73 |||||||||||||||||||| Sbjct: 23436 caccaaaccctaaccctacc 23417
>gb|AC084406.7|AC084406 Oryza sativa chromosome 3 BAC OSJNBa0067E01 genomic sequence, complete sequence Length = 140044 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 77 gccgccgccatggccgaccc 96 |||||||||||||||||||| Sbjct: 27434 gccgccgccatggccgaccc 27415
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 332 ctcggcctccgcgacgccgccgcc 355 |||||||||||| ||||||||||| Sbjct: 15040326 ctcggcctccgccacgccgccgcc 15040303
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 6.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 334 cggcctccgcgacgccgccgccggcgcg 361 ||||| ||||| |||||||||||||||| Sbjct: 689427 cggccgccgcgccgccgccgccggcgcg 689454
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 accaccgccgccgccatggc 90 |||||||||||||||||||| Sbjct: 6186236 accaccgccgccgccatggc 6186255
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 399 tgctcaacgcctgcggcagctccg 422 |||||| ||||||||||||||||| Sbjct: 7622058 tgctcaccgcctgcggcagctccg 7622081
>gb|AE004503.1| Pseudomonas aeruginosa PAO1, section 64 of 529 of the complete genome Length = 13197 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 339 tccgcgacgccgccgccggc 358 |||||||||||||||||||| Sbjct: 10071 tccgcgacgccgccgccggc 10090
>dbj|AP003297.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0698A10 Length = 137348 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 333 tcggcctccgcgacgccgccgccg 356 ||||||||||| |||||||||||| Sbjct: 97963 tcggcctccgccacgccgccgccg 97986
>dbj|AP003874.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1118_G09 Length = 115815 Score = 40.1 bits (20), Expect = 6.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 334 cggcctccgcgacgccgccgccggcgcg 361 ||||| ||||| |||||||||||||||| Sbjct: 27958 cggccgccgcgccgccgccgccggcgcg 27985
>dbj|AP006161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1267B06 Length = 156989 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 accaccgccgccgccatggc 90 |||||||||||||||||||| Sbjct: 151883 accaccgccgccgccatggc 151902
>dbj|AP003999.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1115_A05 Length = 113326 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 accaccgccgccgccatggc 90 |||||||||||||||||||| Sbjct: 49458 accaccgccgccgccatggc 49477
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 340 ccgcgacgccgccgccggcg 359 |||||||||||||||||||| Sbjct: 39237 ccgcgacgccgccgccggcg 39218
>dbj|AP005056.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0689B12 Length = 154745 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 accaccgccgccgccatggc 90 |||||||||||||||||||| Sbjct: 86834 accaccgccgccgccatggc 86853
>dbj|AP005426.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0668D04 Length = 148848 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 332 ctcggcctccgcgacgccgccgcc 355 |||||||||||| ||||||||||| Sbjct: 31969 ctcggcctccgccacgccgccgcc 31946
>dbj|AP005244.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1513_F02 Length = 126845 Score = 40.1 bits (20), Expect = 6.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 334 cggcctccgcgacgccgccgccggcgcg 361 ||||| ||||| |||||||||||||||| Sbjct: 9234 cggccgccgcgccgccgccgccggcgcg 9261
>dbj|AP005429.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0701F11 Length = 154950 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 332 ctcggcctccgcgacgccgccgcc 355 |||||||||||| ||||||||||| Sbjct: 109772 ctcggcctccgccacgccgccgcc 109749
>dbj|AP004064.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1520_C09 Length = 145553 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 75 ccgccgccgccatggccgac 94 |||||||||||||||||||| Sbjct: 105575 ccgccgccgccatggccgac 105556
>dbj|AP003996.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1112_G06 Length = 122580 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 56 ccaaaccctaaccctaccaccgcc 79 ||||||||||||||||||| |||| Sbjct: 103855 ccaaaccctaaccctaccatcgcc 103832 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 75 ccgccgccgccatggccgac 94 |||||||||||||||||||| Sbjct: 61250 ccgccgccgccatggccgac 61231
>dbj|AP004015.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1770_H02 Length = 170648 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 325 cgccgccctcggcctccgcg 344 |||||||||||||||||||| Sbjct: 56428 cgccgccctcggcctccgcg 56409
>emb|X97062.1|EVPORIN E.vacuolata gene encoding porin Length = 1125 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 75 ccgccgccgccatggccgac 94 |||||||||||||||||||| Sbjct: 50 ccgccgccgccatggccgac 69
>dbj|AK110985.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-174-D03, full insert sequence Length = 1747 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 gccgccgccatggccgaccc 96 |||||||||||||||||||| Sbjct: 119 gccgccgccatggccgaccc 138
>dbj|AK109631.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-138-D04, full insert sequence Length = 1495 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 340 ccgcgacgccgccgccggcg 359 |||||||||||||||||||| Sbjct: 679 ccgcgacgccgccgccggcg 698
>dbj|AK109320.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-188-G12, full insert sequence Length = 844 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 332 ctcggcctccgcgacgccgccgcc 355 |||||||||||| ||||||||||| Sbjct: 477 ctcggcctccgccacgccgccgcc 454
>dbj|AK105244.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-113-F08, full insert sequence Length = 1483 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 348 ccgccgccggcgcggagccc 367 |||||||||||||||||||| Sbjct: 882 ccgccgccggcgcggagccc 863
>dbj|AK100297.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023077B14, full insert sequence Length = 1629 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 325 cgccgccctcggcctccgcg 344 |||||||||||||||||||| Sbjct: 1050 cgccgccctcggcctccgcg 1069
>dbj|AK070495.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023052A01, full insert sequence Length = 962 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 340 ccgcgacgccgccgccggcgcgga 363 ||||| |||||||||||||||||| Sbjct: 458 ccgcgtcgccgccgccggcgcgga 435
>dbj|AK069276.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023015I05, full insert sequence Length = 1324 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 333 tcggcctccgcgacgccgccgccg 356 ||||||||||| |||||||||||| Sbjct: 382 tcggcctccgccacgccgccgccg 359
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 372 agaccgccaagatccgcgcc 391 |||||||||||||||||||| Sbjct: 834214 agaccgccaagatccgcgcc 834195
>gb|BC002922.2| Homo sapiens ring finger protein 1, mRNA (cDNA clone MGC:11356 IMAGE:3954313), complete cds Length = 1750 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 72 ccaccgccgccgccatggcc 91 |||||||||||||||||||| Sbjct: 24 ccaccgccgccgccatggcc 5
>dbj|AK065200.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002E22, full insert sequence Length = 1341 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 75 ccgccgccgccatggccgac 94 |||||||||||||||||||| Sbjct: 46 ccgccgccgccatggccgac 65
>dbj|AK065034.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001H04, full insert sequence Length = 1216 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 75 ccgccgccgccatggccgac 94 |||||||||||||||||||| Sbjct: 46 ccgccgccgccatggccgac 65
>dbj|AK061090.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-206-H03, full insert sequence Length = 1198 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 333 tcggcctccgcgacgccgccgccg 356 ||||||||||| |||||||||||| Sbjct: 251 tcggcctccgccacgccgccgccg 228
>emb|AL732344.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0403D02, complete sequence Length = 138387 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 336 gcctccgcgacgccgccgccggcg 359 ||||||||| |||||||||||||| Sbjct: 79910 gcctccgcgtcgccgccgccggcg 79933
>gb|AE017220.1| Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67, complete genome Length = 4755700 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 305 ctctctggcgccgtgggtgg 324 |||||||||||||||||||| Sbjct: 1512736 ctctctggcgccgtgggtgg 1512717
>gb|AC137071.3| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0042B10, from chromosome 3, complete sequence Length = 144205 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 340 ccgcgacgccgccgccggcgcgga 363 ||||| |||||||||||||||||| Sbjct: 6296 ccgcgtcgccgccgccggcgcgga 6273
>emb|AL831799.3|CNS08CAC Oryza sativa chromosome 12, . BAC OSJNBa0087A02 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 177034 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 75 ccgccgccgccatggccgac 94 |||||||||||||||||||| Sbjct: 21916 ccgccgccgccatggccgac 21897
>emb|AL845344.4|CNS08CB6 Oryza sativa chromosome 12, . BAC OSJNBb0108O14 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 138585 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 75 ccgccgccgccatggccgac 94 |||||||||||||||||||| Sbjct: 979 ccgccgccgccatggccgac 998
>gb|AF047363.1|AF047363 Paenibacillus macerans alpha-cyclodextrin glucanotransferase (cgt) gene, complete cds Length = 3025 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 191 tacaagaacctctacgacct 210 |||||||||||||||||||| Sbjct: 1355 tacaagaacctctacgacct 1374
>gb|U40603.1|RNU40603 Rattus norvegicus rat-slowpoke-alpha mRNA, complete cds Length = 5453 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 347 gccgccgccggcgcggagcccggg 370 |||||||||| ||||||||||||| Sbjct: 394 gccgccgccgccgcggagcccggg 371
>emb|CT030709.6| Mouse DNA sequence from clone RP23-268C22 on chromosome 9, complete sequence Length = 206089 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 307 ctctggcgccgtgggtggcg 326 |||||||||||||||||||| Sbjct: 204183 ctctggcgccgtgggtggcg 204164
>gb|M12777.1|BACCDG B.mecerans cyclodextrin glucanotransferase (CD) gene, complete cds Length = 2502 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 191 tacaagaacctctacgacct 210 |||||||||||||||||||| Sbjct: 686 tacaagaacctctacgacct 705
>dbj|D84401.1| Homo sapiens genomic DNA, 43 kb segment from chromosome6, complete sequence Length = 42398 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 72 ccaccgccgccgccatggcc 91 |||||||||||||||||||| Sbjct: 34832 ccaccgccgccgccatggcc 34851 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,706,382 Number of Sequences: 3902068 Number of extensions: 3706382 Number of successful extensions: 109947 Number of sequences better than 10.0: 173 Number of HSP's better than 10.0 without gapping: 190 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 101340 Number of HSP's gapped (non-prelim): 8597 length of query: 482 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 460 effective length of database: 17,147,199,772 effective search space: 7887711895120 effective search space used: 7887711895120 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
