>Y657_MYCPN (P75134) Hypothetical protein MG443 homolog (K05_orf401)|
          Length = 401

 Score = 32.0 bits (71), Expect = 0.91
 Identities = 15/37 (40%), Positives = 20/37 (54%)
 Frame = -3

Query: 227 ASQGPSFLSSSPRTETWRQARKERHLDST*KTAPLLW 117
           A+Q PS LS+   TE W  A+K   +D +    P LW
Sbjct: 152 ANQLPSMLSAVHHTEFWEDAKKAEGVDQSALFVPFLW 188

>NCAP_IBVSA (Q8JMI6) Nucleocapsid protein (N structural protein) (NC)|
          Length = 409

 Score = 30.8 bits (68), Expect = 2.0
 Identities = 17/45 (37%), Positives = 26/45 (57%)
 Frame = +2

Query: 173 ASKSPFAESLKGKKDPEKQVDETEKSETADKSAGYELPESLSFDD 307
           +S +P  + LK +K P+KQ DE +K+ T+D+         L FDD
Sbjct: 351 SSPAPRQQRLKKEKRPKKQDDEVDKALTSDEERN---NAQLEFDD 392

>NCAP_IBVG (P32923) Nucleocapsid protein (N structural protein) (NC)|
          Length = 409

 Score = 30.8 bits (68), Expect = 2.0
 Identities = 17/45 (37%), Positives = 26/45 (57%)
 Frame = +2

Query: 173 ASKSPFAESLKGKKDPEKQVDETEKSETADKSAGYELPESLSFDD 307
           +S +P  + LK +K P+KQ DE +K+ T+D+         L FDD
Sbjct: 351 SSPAPRQQRLKKEKRPKKQDDEVDKALTSDEERN---NAQLEFDD 392

>NCAP_CVTIN (Q9PZ51) Nucleocapsid protein (N structural protein) (NC)|
          Length = 409

 Score = 30.8 bits (68), Expect = 2.0
 Identities = 17/44 (38%), Positives = 25/44 (56%)
 Frame = +2

Query: 176 SKSPFAESLKGKKDPEKQVDETEKSETADKSAGYELPESLSFDD 307
           S +P  + LK +K P+KQ DE +K+ T+D+         L FDD
Sbjct: 352 SPAPRQQRLKKEKKPKKQDDEVDKALTSDEERN---NAQLEFDD 392

>RMUC_RICPR (Q9ZCN3) DNA recombination protein rmuC homolog|
          Length = 426

 Score = 30.4 bits (67), Expect = 2.7
 Identities = 21/61 (34%), Positives = 31/61 (50%)
 Frame = +2

Query: 140 KLNPDAAPFVPASKSPFAESLKGKKDPEKQVDETEKSETADKSAGYELPESLSFDDYAES 319
           KL PDA  F+P+      +S    K  +  VD  + S    K+  Y L +SL+  DYAE+
Sbjct: 204 KLRPDAIIFLPSGNLMVIDS----KASKFLVDSQDNSVNLSKTMNYHL-KSLANKDYAEN 258

Query: 320 L 322
           +
Sbjct: 259 I 259

>YEO0_YEAST (P40033) Hypothetical 23.4 kDa protein in CAJ1-HOM3 intergenic|
           region
          Length = 202

 Score = 29.6 bits (65), Expect = 4.5
 Identities = 12/46 (26%), Positives = 28/46 (60%)
 Frame = +2

Query: 200 LKGKKDPEKQVDETEKSETADKSAGYELPESLSFDDYAESLGKINI 337
           +K KK    ++  T++++  D+S   +LP+   +D +  S+G+I++
Sbjct: 86  IKEKKSVNIEMGRTQQTKKIDQSLSKKLPKGTIYDPFDFSMGRIHL 131

>CDSN_MOUSE (Q7TPC1) Corneodesmosin precursor|
          Length = 561

 Score = 29.3 bits (64), Expect = 5.9
 Identities = 16/35 (45%), Positives = 20/35 (57%)
 Frame = +1

Query: 73  SPAPLPPVGVEVC*IQSNGAVF*VESRCRSFRACL 177
           SP P+P VGV++C + S G V      CRS R  L
Sbjct: 502 SPQPVPSVGVKLCGLNSPGRV-----PCRSIRNIL 531


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 49,150,389
Number of Sequences: 219361
Number of extensions: 781118
Number of successful extensions: 2638
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2558
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2637
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3420806017
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)