ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast78c07
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 161 3e-36
2dbj|AP005474.3| Oryza sativa (japonica cultivar-group) genomic D... 161 3e-36
3dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 151 3e-33
4dbj|AP005725.4| Oryza sativa (japonica cultivar-group) genomic D... 151 3e-33
5dbj|AP005563.3| Oryza sativa (japonica cultivar-group) genomic D... 151 3e-33
6ref|XM_450124.1| Oryza sativa (japonica cultivar-group), mRNA 147 4e-32
7gb|AC025448.6| Homo sapiens chromosome 5 clone CTD-2113L7, compl... 42 1.7
8dbj|AP000787.5| Homo sapiens genomic DNA, chromosome 11 clone:RP... 42 1.7
9gb|AC114642.6| Mus musculus chromosome 3, clone RP24-127D4, comp... 40 6.6
10gb|CP000024.1| Streptococcus thermophilus CNRZ1066, complete genome 40 6.6
11gb|AC119834.12| Mus musculus chromosome 5, clone RP24-383P24, co... 40 6.6
12gb|AC133003.3| Oryza sativa chromosome 3 BAC OSJNBa0010D22 genom... 40 6.6
13gb|AC147038.2| Pan troglodytes BAC clone RP43-112D23 from 7, com... 40 6.6
14gb|AC124475.3| Mus musculus BAC clone RP24-92F8 from chromosome ... 40 6.6
15gb|L11665.1|MTVNGHYPER Obuda pepper virus RNA 40 6.6
16gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 6.6
17gb|BC030398.1| Mus musculus RIKEN cDNA E230013L22 gene, mRNA (cD... 40 6.6
18emb|AL136987.11| Human DNA sequence from clone RP5-1011O1 on chr... 40 6.6
19gb|AF228661.4| Homo sapiens chromosome 8 clone CTD-3015B2 map q1... 40 6.6
20gb|AF149786.3| Homo sapiens chromosome 8 clone GS1-190e2 map q11... 40 6.6
21gb|AC104939.7| Homo sapiens chromosome 8, clone CTD-3015B2, comp... 40 6.6
22gb|AC104232.5| Homo sapiens chromosome 8, clone RP11-1D12, compl... 40 6.6
23gb|AC093182.3| Homo sapiens chromosome 7 clone RP11-19B3, comple... 40 6.6
24emb|BX005126.10| Zebrafish DNA sequence from clone CH211-129O9 i... 40 6.6
25gb|AC164078.4| Mus musculus chromosome 3, clone RP23-123C15, com... 40 6.6
26gb|AC158994.4| Mus musculus BAC clone RP24-79P8 from chromosome ... 40 6.6
27emb|BX510647.10| Zebrafish DNA sequence from clone CH211-87N9 in... 40 6.6
28dbj|AK054035.1| Mus musculus 2 days pregnant adult female oviduc... 40 6.6
29dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.6
30dbj|AB222209.1| Tetrahymena thermophila MYO4 mRNA for myosin 4, ... 40 6.6
31gb|AC009518.9| Homo sapiens chromosome 7 clone RP11-193I17, comp... 40 6.6
32gb|AC147103.3| Pan troglodytes BAC clone RP43-31L11 from chromos... 40 6.6
33gb|AC154742.2| Mus musculus BAC clone RP24-392F16 from 13, compl... 40 6.6
34dbj|D13438.1|MTVGRNA Obuda pepper virus genomic RNA for 130K pro... 40 6.6
35gb|CP000023.1| Streptococcus thermophilus LMG 18311, complete ge... 40 6.6

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score =  161 bits (81), Expect = 3e-36
 Identities = 132/149 (88%)
 Strand = Plus / Plus

                                                                           
Query: 219     ctgagaagcaagtagatgagactgaaaagagtgagaccgctgacaagtctgctgggtatg 278
               ||||||||||||||| ||| |||||||||  |||||  ||||||||||||||||  ||||
Sbjct: 1907343 ctgagaagcaagtaggtgatactgaaaaggatgagaatgctgacaagtctgctgaatatg 1907402

                                                                           
Query: 279     aactcccagagtccctttcttttgatgactatgctgaaagcctaggaaagatcaacatct 338
               | |||||||| ||||||||||| ||||||||||||||||||||||||||| ||||||| |
Sbjct: 1907403 agctcccagattccctttctttggatgactatgctgaaagcctaggaaagctcaacattt 1907462

                                            
Query: 339     ctaccgagtcatcatcaaaaggagaagct 367
               || | || || ||||||||||||||||||
Sbjct: 1907463 ctgcagaatcttcatcaaaaggagaagct 1907491



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 58/66 (87%)
 Strand = Plus / Plus

                                                                           
Query: 392     catctcgccgtggtggaatctctctcagtgatgttcccagatgtgtcagctgacttcatt 451
               ||||| || ||||| ||||||||||||  |||||||||||||||||| || |||||||||
Sbjct: 1907543 catcttgctgtggtagaatctctctcaaagatgttcccagatgtgtctgccgacttcatt 1907602

                     
Query: 452     cttgaa 457
                |||||
Sbjct: 1907603 gttgaa 1907608



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>dbj|AP005474.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBa0081C13
          Length = 144624

 Score =  161 bits (81), Expect = 3e-36
 Identities = 132/149 (88%)
 Strand = Plus / Plus

                                                                         
Query: 219   ctgagaagcaagtagatgagactgaaaagagtgagaccgctgacaagtctgctgggtatg 278
             ||||||||||||||| ||| |||||||||  |||||  ||||||||||||||||  ||||
Sbjct: 46904 ctgagaagcaagtaggtgatactgaaaaggatgagaatgctgacaagtctgctgaatatg 46963

                                                                         
Query: 279   aactcccagagtccctttcttttgatgactatgctgaaagcctaggaaagatcaacatct 338
             | |||||||| ||||||||||| ||||||||||||||||||||||||||| ||||||| |
Sbjct: 46964 agctcccagattccctttctttggatgactatgctgaaagcctaggaaagctcaacattt 47023

                                          
Query: 339   ctaccgagtcatcatcaaaaggagaagct 367
             || | || || ||||||||||||||||||
Sbjct: 47024 ctgcagaatcttcatcaaaaggagaagct 47052



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 58/66 (87%)
 Strand = Plus / Plus

                                                                         
Query: 392   catctcgccgtggtggaatctctctcagtgatgttcccagatgtgtcagctgacttcatt 451
             ||||| || ||||| ||||||||||||  |||||||||||||||||| || |||||||||
Sbjct: 47104 catcttgctgtggtagaatctctctcaaagatgttcccagatgtgtctgccgacttcatt 47163

                   
Query: 452   cttgaa 457
              |||||
Sbjct: 47164 gttgaa 47169



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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
               sequence
          Length = 22696651

 Score =  151 bits (76), Expect = 3e-33
 Identities = 199/240 (82%)
 Strand = Plus / Minus

                                                                           
Query: 123     caatggagcggtcttttaagttgaatccagatgccgctcctttcgtgcctgcctccaagt 182
               ||||||||||||||| | ||||||||||| ||||| |||| || |||||| || | | ||
Sbjct: 1865132 caatggagcggtcttctcagttgaatccaaatgccactccctttgtgcctcccccaaggt 1865073

                                                                           
Query: 183     ctccgttcgcggagagcttgaaaggaaagaaggaccctgagaagcaagtagatgagactg 242
               || |||| |  || |||||||  |||| ||||| | ||||||||||||||| |||  | |
Sbjct: 1865072 cttcgtttgaagaaagcttgagcggaaggaaggcctctgagaagcaagtaggtgattcag 1865013

                                                                           
Query: 243     aaaagagtgagaccgctgacaagtctgctgggtatgaactcccagagtccctttcttttg 302
               |||||  |||||| |||||||||||| |||  ||||| |||||||| ||||||||||| |
Sbjct: 1865012 aaaaggatgagactgctgacaagtcttctgaatatgagctcccagattccctttctttgg 1864953

                                                                           
Query: 303     atgactatgctgaaagcctaggaaagatcaacatctctaccgagtcatcatcaaaaggag 362
               | ||||||| |||||||||||||||| ||||||| ||| | || || |||||||||||||
Sbjct: 1864952 acgactatggtgaaagcctaggaaagctcaacatttctgcagaatcttcatcaaaaggag 1864893



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 67/76 (88%), Gaps = 1/76 (1%)
 Strand = Plus / Minus

                                                                           
Query: 392     catctcgccgtggtggaatctctctcagtgatgttcccagatgtgtcagctgacttcatt 451
               ||||| || ||||| |||||||||||   |||||||||||||||||| ||||||||||||
Sbjct: 1864839 catcttgctgtggtagaatctctctcgaagatgttcccagatgtgtctgctgacttcatt 1864780

                               
Query: 452     cttgaaagcactgagg 467
                ||| |||||||||||
Sbjct: 1864779 gttg-aagcactgagg 1864765



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>dbj|AP005725.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OSJNBa0025H18
          Length = 176201

 Score =  151 bits (76), Expect = 3e-33
 Identities = 199/240 (82%)
 Strand = Plus / Minus

                                                                         
Query: 123   caatggagcggtcttttaagttgaatccagatgccgctcctttcgtgcctgcctccaagt 182
             ||||||||||||||| | ||||||||||| ||||| |||| || |||||| || | | ||
Sbjct: 14300 caatggagcggtcttctcagttgaatccaaatgccactccctttgtgcctcccccaaggt 14241

                                                                         
Query: 183   ctccgttcgcggagagcttgaaaggaaagaaggaccctgagaagcaagtagatgagactg 242
             || |||| |  || |||||||  |||| ||||| | ||||||||||||||| |||  | |
Sbjct: 14240 cttcgtttgaagaaagcttgagcggaaggaaggcctctgagaagcaagtaggtgattcag 14181

                                                                         
Query: 243   aaaagagtgagaccgctgacaagtctgctgggtatgaactcccagagtccctttcttttg 302
             |||||  |||||| |||||||||||| |||  ||||| |||||||| ||||||||||| |
Sbjct: 14180 aaaaggatgagactgctgacaagtcttctgaatatgagctcccagattccctttctttgg 14121

                                                                         
Query: 303   atgactatgctgaaagcctaggaaagatcaacatctctaccgagtcatcatcaaaaggag 362
             | ||||||| |||||||||||||||| ||||||| ||| | || || |||||||||||||
Sbjct: 14120 acgactatggtgaaagcctaggaaagctcaacatttctgcagaatcttcatcaaaaggag 14061



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 67/76 (88%), Gaps = 1/76 (1%)
 Strand = Plus / Minus

                                                                         
Query: 392   catctcgccgtggtggaatctctctcagtgatgttcccagatgtgtcagctgacttcatt 451
             ||||| || ||||| |||||||||||   |||||||||||||||||| ||||||||||||
Sbjct: 14007 catcttgctgtggtagaatctctctcgaagatgttcccagatgtgtctgctgacttcatt 13948

                             
Query: 452   cttgaaagcactgagg 467
              ||| |||||||||||
Sbjct: 13947 gttg-aagcactgagg 13933



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>dbj|AP005563.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:OJ1227_D07
          Length = 118358

 Score =  151 bits (76), Expect = 3e-33
 Identities = 199/240 (82%)
 Strand = Plus / Minus

                                                                          
Query: 123    caatggagcggtcttttaagttgaatccagatgccgctcctttcgtgcctgcctccaagt 182
              ||||||||||||||| | ||||||||||| ||||| |||| || |||||| || | | ||
Sbjct: 103794 caatggagcggtcttctcagttgaatccaaatgccactccctttgtgcctcccccaaggt 103735

                                                                          
Query: 183    ctccgttcgcggagagcttgaaaggaaagaaggaccctgagaagcaagtagatgagactg 242
              || |||| |  || |||||||  |||| ||||| | ||||||||||||||| |||  | |
Sbjct: 103734 cttcgtttgaagaaagcttgagcggaaggaaggcctctgagaagcaagtaggtgattcag 103675

                                                                          
Query: 243    aaaagagtgagaccgctgacaagtctgctgggtatgaactcccagagtccctttcttttg 302
              |||||  |||||| |||||||||||| |||  ||||| |||||||| ||||||||||| |
Sbjct: 103674 aaaaggatgagactgctgacaagtcttctgaatatgagctcccagattccctttctttgg 103615

                                                                          
Query: 303    atgactatgctgaaagcctaggaaagatcaacatctctaccgagtcatcatcaaaaggag 362
              | ||||||| |||||||||||||||| ||||||| ||| | || || |||||||||||||
Sbjct: 103614 acgactatggtgaaagcctaggaaagctcaacatttctgcagaatcttcatcaaaaggag 103555



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 67/76 (88%), Gaps = 1/76 (1%)
 Strand = Plus / Minus

                                                                          
Query: 392    catctcgccgtggtggaatctctctcagtgatgttcccagatgtgtcagctgacttcatt 451
              ||||| || ||||| |||||||||||   |||||||||||||||||| ||||||||||||
Sbjct: 103501 catcttgctgtggtagaatctctctcgaagatgttcccagatgtgtctgctgacttcatt 103442

                              
Query: 452    cttgaaagcactgagg 467
               ||| |||||||||||
Sbjct: 103441 gttg-aagcactgagg 103427



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>ref|XM_450124.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 444

 Score =  147 bits (74), Expect = 4e-32
 Identities = 197/238 (82%)
 Strand = Plus / Plus

                                                                       
Query: 125 atggagcggtcttttaagttgaatccagatgccgctcctttcgtgcctgcctccaagtct 184
           ||||||||||||| | ||||||||||| ||||| |||| || |||||| || | | ||||
Sbjct: 1   atggagcggtcttctcagttgaatccaaatgccactccctttgtgcctcccccaaggtct 60

                                                                       
Query: 185 ccgttcgcggagagcttgaaaggaaagaaggaccctgagaagcaagtagatgagactgaa 244
            |||| |  || |||||||  |||| ||||| | ||||||||||||||| |||  | |||
Sbjct: 61  tcgtttgaagaaagcttgagcggaaggaaggcctctgagaagcaagtaggtgattcagaa 120

                                                                       
Query: 245 aagagtgagaccgctgacaagtctgctgggtatgaactcccagagtccctttcttttgat 304
           |||  |||||| |||||||||||| |||  ||||| |||||||| ||||||||||| || 
Sbjct: 121 aaggatgagactgctgacaagtcttctgaatatgagctcccagattccctttctttggac 180

                                                                     
Query: 305 gactatgctgaaagcctaggaaagatcaacatctctaccgagtcatcatcaaaaggag 362
           ||||||| |||||||||||||||| ||||||| ||| | || || |||||||||||||
Sbjct: 181 gactatggtgaaagcctaggaaagctcaacatttctgcagaatcttcatcaaaaggag 238



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 67/76 (88%), Gaps = 1/76 (1%)
 Strand = Plus / Plus

                                                                       
Query: 392 catctcgccgtggtggaatctctctcagtgatgttcccagatgtgtcagctgacttcatt 451
           ||||| || ||||| |||||||||||   |||||||||||||||||| ||||||||||||
Sbjct: 292 catcttgctgtggtagaatctctctcgaagatgttcccagatgtgtctgctgacttcatt 351

                           
Query: 452 cttgaaagcactgagg 467
            ||| |||||||||||
Sbjct: 352 gttg-aagcactgagg 366



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>gb|AC025448.6| Homo sapiens chromosome 5 clone CTD-2113L7, complete sequence
          Length = 164190

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 260   gacaagtctgctgggtatgaa 280
             |||||||||||||||||||||
Sbjct: 66240 gacaagtctgctgggtatgaa 66220



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>dbj|AP000787.5| Homo sapiens genomic DNA, chromosome 11 clone:RP11-712B9, complete
              sequence
          Length = 173441

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 206    ggaaagaaggaccctgagaagcaag 230
              |||||||||||||||||| ||||||
Sbjct: 103930 ggaaagaaggaccctgagtagcaag 103906



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>gb|AC114642.6| Mus musculus chromosome 3, clone RP24-127D4, complete sequence
          Length = 189320

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 444    acttcattcttgaaagcact 463
              ||||||||||||||||||||
Sbjct: 177585 acttcattcttgaaagcact 177604



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>gb|CP000024.1| Streptococcus thermophilus CNRZ1066, complete genome
          Length = 1796226

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 337     ctctaccgagtcatcatcaa 356
               ||||||||||||||||||||
Sbjct: 1222679 ctctaccgagtcatcatcaa 1222660



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>gb|AC119834.12| Mus musculus chromosome 5, clone RP24-383P24, complete sequence
          Length = 223764

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 349  atcatcaaaaggagaagctg 368
            ||||||||||||||||||||
Sbjct: 4111 atcatcaaaaggagaagctg 4092



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>gb|AC133003.3| Oryza sativa chromosome 3 BAC OSJNBa0010D22 genomic sequence, complete
              sequence
          Length = 190055

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 388    tagccatctcgccgtggtgg 407
              ||||||||||||||||||||
Sbjct: 122998 tagccatctcgccgtggtgg 123017



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>gb|AC147038.2| Pan troglodytes BAC clone RP43-112D23 from 7, complete sequence
          Length = 192615

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 290   tccctttcttttgatgacta 309
             ||||||||||||||||||||
Sbjct: 31333 tccctttcttttgatgacta 31352



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>gb|AC124475.3| Mus musculus BAC clone RP24-92F8 from chromosome 8, complete sequence
          Length = 212858

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 387   gtagccatctcgccgtggtggaatctct 414
             ||||||||||||||  ||||||||||||
Sbjct: 92166 gtagccatctcgcctcggtggaatctct 92139



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>gb|L11665.1|MTVNGHYPER Obuda pepper virus RNA
          Length = 6506

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 230  gtagatgagactgaaaagag 249
            ||||||||||||||||||||
Sbjct: 2934 gtagatgagactgaaaagag 2953



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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 388      tagccatctcgccgtggtgg 407
                ||||||||||||||||||||
Sbjct: 21430087 tagccatctcgccgtggtgg 21430106



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>gb|BC030398.1| Mus musculus RIKEN cDNA E230013L22 gene, mRNA (cDNA clone
            IMAGE:4189084), with apparent retained intron
          Length = 1862

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 387  gtagccatctcgccgtggtggaatctct 414
            ||||||||||||||  ||||||||||||
Sbjct: 1333 gtagccatctcgcctcggtggaatctct 1306



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>emb|AL136987.11| Human DNA sequence from clone RP5-1011O1 on chromosome 1 Contains the
             RGS1 gene for regulator of G-protein signalling 1,
             complete sequence
          Length = 122562

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 448   cattcttgaaagcactgagg 467
             ||||||||||||||||||||
Sbjct: 87131 cattcttgaaagcactgagg 87112



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>gb|AF228661.4| Homo sapiens chromosome 8 clone CTD-3015B2 map q11-q13, complete sequence
          Length = 140374

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 432    atgtgtcagctgacttcatt 451
              ||||||||||||||||||||
Sbjct: 134234 atgtgtcagctgacttcatt 134253



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>gb|AF149786.3| Homo sapiens chromosome 8 clone GS1-190e2 map q11-q13, complete
             sequence
          Length = 60767

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 432   atgtgtcagctgacttcatt 451
             ||||||||||||||||||||
Sbjct: 48892 atgtgtcagctgacttcatt 48911



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>gb|AC104939.7| Homo sapiens chromosome 8, clone CTD-3015B2, complete sequence
          Length = 140375

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 432    atgtgtcagctgacttcatt 451
              ||||||||||||||||||||
Sbjct: 134008 atgtgtcagctgacttcatt 134027



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>gb|AC104232.5| Homo sapiens chromosome 8, clone RP11-1D12, complete sequence
          Length = 148933

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 432    atgtgtcagctgacttcatt 451
              ||||||||||||||||||||
Sbjct: 143145 atgtgtcagctgacttcatt 143126



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>gb|AC093182.3| Homo sapiens chromosome 7 clone RP11-19B3, complete sequence
          Length = 155164

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 290   tccctttcttttgatgacta 309
             ||||||||||||||||||||
Sbjct: 49731 tccctttcttttgatgacta 49712



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>emb|BX005126.10| Zebrafish DNA sequence from clone CH211-129O9 in linkage group 5,
             complete sequence
          Length = 160487

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 354   caaaaggagaagctgctgag 373
             ||||||||||||||||||||
Sbjct: 22535 caaaaggagaagctgctgag 22516



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>gb|AC164078.4| Mus musculus chromosome 3, clone RP23-123C15, complete sequence
          Length = 188095

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 444    acttcattcttgaaagcact 463
              ||||||||||||||||||||
Sbjct: 179734 acttcattcttgaaagcact 179715



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>gb|AC158994.4| Mus musculus BAC clone RP24-79P8 from chromosome 5, complete sequence
          Length = 201330

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 349   atcatcaaaaggagaagctg 368
             ||||||||||||||||||||
Sbjct: 35115 atcatcaaaaggagaagctg 35134



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>emb|BX510647.10| Zebrafish DNA sequence from clone CH211-87N9 in linkage group 5,
             complete sequence
          Length = 198695

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 354   caaaaggagaagctgctgag 373
             ||||||||||||||||||||
Sbjct: 45427 caaaaggagaagctgctgag 45446



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>dbj|AK054035.1| Mus musculus 2 days pregnant adult female oviduct cDNA, RIKEN
            full-length enriched library, clone:E230013L22
            product:unclassifiable, full insert sequence
          Length = 1857

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 387  gtagccatctcgccgtggtggaatctct 414
            ||||||||||||||  ||||||||||||
Sbjct: 1356 gtagccatctcgcctcggtggaatctct 1329



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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 388      tagccatctcgccgtggtgg 407
                ||||||||||||||||||||
Sbjct: 21423116 tagccatctcgccgtggtgg 21423135



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>dbj|AB222209.1| Tetrahymena thermophila MYO4 mRNA for myosin 4, complete cds
          Length = 5391

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 349  atcatcaaaaggagaagctg 368
            ||||||||||||||||||||
Sbjct: 3018 atcatcaaaaggagaagctg 3037



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>gb|AC009518.9| Homo sapiens chromosome 7 clone RP11-193I17, complete sequence
          Length = 176209

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 290   tccctttcttttgatgacta 309
             ||||||||||||||||||||
Sbjct: 30820 tccctttcttttgatgacta 30839



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>gb|AC147103.3| Pan troglodytes BAC clone RP43-31L11 from chromosome 7, complete
             sequence
          Length = 222089

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 290   tccctttcttttgatgacta 309
             ||||||||||||||||||||
Sbjct: 48974 tccctttcttttgatgacta 48955



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>gb|AC154742.2| Mus musculus BAC clone RP24-392F16 from 13, complete sequence
          Length = 129749

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 197    agcttgaaaggaaagaaggaccct 220
              ||||| ||||||||||||||||||
Sbjct: 118715 agcttcaaaggaaagaaggaccct 118692



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>dbj|D13438.1|MTVGRNA Obuda pepper virus genomic RNA for 130K protein, 180K protein, 30K
            protein and coat protein, complete cds
          Length = 6507

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 230  gtagatgagactgaaaagag 249
            ||||||||||||||||||||
Sbjct: 2934 gtagatgagactgaaaagag 2953



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>gb|CP000023.1| Streptococcus thermophilus LMG 18311, complete genome
          Length = 1796846

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 337     ctctaccgagtcatcatcaa 356
               ||||||||||||||||||||
Sbjct: 1216703 ctctaccgagtcatcatcaa 1216684


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,022,212
Number of Sequences: 3902068
Number of extensions: 4022212
Number of successful extensions: 74985
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 74857
Number of HSP's gapped (non-prelim): 124
length of query: 490
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 468
effective length of database: 17,147,199,772
effective search space: 8024889493296
effective search space used: 8024889493296
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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