>LEA29_GOSHI (P13940) Late embryogenesis abundant protein D-29 (LEA D-29)|
          Length = 302

 Score = 39.3 bits (90), Expect = 0.005
 Identities = 22/69 (31%), Positives = 32/69 (46%)
 Frame = +2

Query: 248 ESWAGWAKDKISEGLGLDKISEGLGLKHHADEEEAARKAGHNVKSARETAQHAASETXRQ 427
           ESW  WAK+KISEGLG  +  +  G       E+A           ++  Q  AS     
Sbjct: 95  ESWTEWAKEKISEGLGFKQDDDPKG-----SVEKAFDSVADTATKTKDKLQDMASGAGEY 149

Query: 428 ASGQASDAR 454
           ++G+A D +
Sbjct: 150 SAGKAKDMK 158

>SYFB_SILPO (Q5LMS3) Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20)|
           (Phenylalanine--tRNA ligase beta chain) (PheRS)
          Length = 798

 Score = 33.1 bits (74), Expect = 0.36
 Identities = 18/69 (26%), Positives = 33/69 (47%), Gaps = 3/69 (4%)
 Frame = +2

Query: 263 WAKDKISEGLGLDKISEGL---GLKHHADEEEAARKAGHNVKSARETAQHAASETXRQAS 433
           W KD +     +D+I+E L   GL+    E  AAR AG  +   +  +QH  ++  R   
Sbjct: 7   WLKDHLDTTASVDEIAEALTDLGLEVEGIENPAARLAGFTLAHVKSASQHPDADRLRVCV 66

Query: 434 GQASDARRR 460
            + ++  ++
Sbjct: 67  VETNEGEKQ 75

>ILVD_ZYMMO (Q5NLJ4) Dihydroxy-acid dehydratase (EC 4.2.1.9) (DAD)|
          Length = 618

 Score = 30.8 bits (68), Expect = 1.8
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = +2

Query: 278 ISEGLGLDKISEGLGLKHHADEEEAARKAGHNV 376
           ++E LGL     G  L  H+D E+  RKAGH +
Sbjct: 207 LTEALGLSFPGNGSMLATHSDREQLFRKAGHTI 239

>CAC1F_HUMAN (O60840) Voltage-dependent L-type calcium channel alpha-1F subunit|
           (Voltage-gated calcium channel alpha subunit Cav1.4)
          Length = 1966

 Score = 29.3 bits (64), Expect = 5.2
 Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 3/63 (4%)
 Frame = +2

Query: 257 AGWAKDKISEGLG---LDKISEGLGLKHHADEEEAARKAGHNVKSARETAQHAASETXRQ 427
           AG AKDK  E      L + +EGL      +EEE AR+ G +++   E  +    E   +
Sbjct: 755 AGTAKDKGGEKSNEKDLPQENEGLVPGVEKEEEEGARREGADMEEEEEEEEEEEEEEEEE 814

Query: 428 ASG 436
            +G
Sbjct: 815 GAG 817

>SYD_CORDI (Q6NGZ4) Aspartyl-tRNA synthetase (EC 6.1.1.12) (Aspartate--tRNA|
           ligase) (AspRS)
          Length = 601

 Score = 29.3 bits (64), Expect = 5.2
 Identities = 20/72 (27%), Positives = 31/72 (43%), Gaps = 4/72 (5%)
 Frame = +2

Query: 215 DGAEVAPGKEEESWAGWAKDKISEGLGLDKISEGLGL----KHHADEEEAARKAGHNVKS 382
           DG    P ++ ++W  WAK + ++GL    + E   L      +  +EE A  A H    
Sbjct: 324 DGGASQPRRQLDAWQEWAKQRGAKGLAYILVGENGELTGPVSKNITDEERAGIAAHVGAK 383

Query: 383 ARETAQHAASET 418
             +    AA ET
Sbjct: 384 PGDCIFFAAGET 395

>MIER1_XENLA (Q7T105) Mesoderm induction early response protein 1 (Mi-er1)|
           (Xmi-er1) (Early response 1) (Er1)
          Length = 495

 Score = 28.9 bits (63), Expect = 6.8
 Identities = 20/53 (37%), Positives = 25/53 (47%), Gaps = 11/53 (20%)
 Frame = +2

Query: 266 AKDKISEGLGLDKISEGLGLKHHA-----------DEEEAARKAGHNVKSARE 391
           A  +  E  GLD I EG  +K +            D EEA R+   NVK+ARE
Sbjct: 222 ASRRTCEERGLDAIPEGSHIKDNEQALYELVKCNFDTEEALRRLRFNVKAARE 274

>PLEC1_RAT (P30427) Plectin-1 (PLTN) (PCN)|
          Length = 4687

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 13/35 (37%), Positives = 21/35 (60%)
 Frame = +2

Query: 323  LKHHADEEEAARKAGHNVKSARETAQHAASETXRQ 427
            L+    E EAAR+A    + ARE A+  A+++ +Q
Sbjct: 2216 LERLRSEAEAARRAAEEAEEAREQAEREAAQSRKQ 2250


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 29,928,560
Number of Sequences: 219361
Number of extensions: 355632
Number of successful extensions: 1793
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1761
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1792
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3014947676
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)