ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast78c02 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_190667.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1479 Score = 680 bits (343), Expect = 0.0 Identities = 409/431 (94%) Strand = Plus / Plus Query: 1 catcaacgaccggctggacaagcggacgtggacatacatcttcggcgcgtgctgcgcgac 60 ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| || Sbjct: 513 catcaacgaccggctggacaagcggacgtggacgtacatcttcggcgcgtgctgcgccac 572 Query: 61 gacggtgttcatcccgtcgttccacaactaccggatctggtccttcctggggctgggcat 120 |||||||||||||||||||||||||||||||||||||||||||||||||| || ||||| Sbjct: 573 cacggtgttcatcccgtcgttccacaactaccggatctggtccttcctgggcctcggcat 632 Query: 121 gaccacctacaccgcctggtacctcgccatcgccgcgctcatcaacggccaggtcgaggg 180 ||||||||| ||||| |||||||||||||||||||| ||| |||||||||||| ||| || Sbjct: 633 gaccacctataccgcttggtacctcgccatcgccgccctcctcaacggccaggccgaagg 692 Query: 181 cgtcacccacaccggaccaaacaagctcgtcctctacttcaccggcgccaccaacatcct 240 | ||||||||||||| |||| |||||| || || |||||||||||||||||||||||||| Sbjct: 693 catcacccacaccggtccaaccaagctggtgctgtacttcaccggcgccaccaacatcct 752 Query: 241 ctacaccttcggcggccacgccgtcacagtggagatcatgcacgcgatgtggaagccggc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 753 ctacaccttcggcggccacgccgtcacagtggagatcatgcacgcgatgtggaaaccggc 812 Query: 301 caagttcaagtacatctacctgctggcgacgctgtacgtgttcacgctgacgctgccgtc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 813 caagttcaagtacatctacctgctggcgacgctgtacgtgttcacgctgacgctgccgtc 872 Query: 361 ggcgtcggccatgtactgggcgtacggggacgagctgctggcgcacgccaacgccttctc 420 ||||||||||||||||||||||| |||||||||||||||| | ||| ||||||||||||| Sbjct: 873 ggcgtcggccatgtactgggcgttcggggacgagctgctgacccactccaacgccttctc 932 Query: 421 gctgctgccca 431 ||||||||||| Sbjct: 933 gctgctgccca 943
>dbj|AK103981.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-017-C03, full insert sequence Length = 1494 Score = 680 bits (343), Expect = 0.0 Identities = 409/431 (94%) Strand = Plus / Plus Query: 1 catcaacgaccggctggacaagcggacgtggacatacatcttcggcgcgtgctgcgcgac 60 ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| || Sbjct: 1 catcaacgaccggctggacaagcggacgtggacgtacatcttcggcgcgtgctgcgccac 60 Query: 61 gacggtgttcatcccgtcgttccacaactaccggatctggtccttcctggggctgggcat 120 |||||||||||||||||||||||||||||||||||||||||||||||||| || ||||| Sbjct: 61 cacggtgttcatcccgtcgttccacaactaccggatctggtccttcctgggcctcggcat 120 Query: 121 gaccacctacaccgcctggtacctcgccatcgccgcgctcatcaacggccaggtcgaggg 180 ||||||||| ||||| |||||||||||||||||||| ||| |||||||||||| ||| || Sbjct: 121 gaccacctataccgcttggtacctcgccatcgccgccctcctcaacggccaggccgaagg 180 Query: 181 cgtcacccacaccggaccaaacaagctcgtcctctacttcaccggcgccaccaacatcct 240 | ||||||||||||| |||| |||||| || || |||||||||||||||||||||||||| Sbjct: 181 catcacccacaccggtccaaccaagctggtgctgtacttcaccggcgccaccaacatcct 240 Query: 241 ctacaccttcggcggccacgccgtcacagtggagatcatgcacgcgatgtggaagccggc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 241 ctacaccttcggcggccacgccgtcacagtggagatcatgcacgcgatgtggaaaccggc 300 Query: 301 caagttcaagtacatctacctgctggcgacgctgtacgtgttcacgctgacgctgccgtc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 caagttcaagtacatctacctgctggcgacgctgtacgtgttcacgctgacgctgccgtc 360 Query: 361 ggcgtcggccatgtactgggcgtacggggacgagctgctggcgcacgccaacgccttctc 420 ||||||||||||||||||||||| |||||||||||||||| | ||| ||||||||||||| Sbjct: 361 ggcgtcggccatgtactgggcgttcggggacgagctgctgacccactccaacgccttctc 420 Query: 421 gctgctgccca 431 ||||||||||| Sbjct: 421 gctgctgccca 431
>dbj|AK103239.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033123G17, full insert sequence Length = 1968 Score = 680 bits (343), Expect = 0.0 Identities = 409/431 (94%) Strand = Plus / Plus Query: 1 catcaacgaccggctggacaagcggacgtggacatacatcttcggcgcgtgctgcgcgac 60 ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| || Sbjct: 639 catcaacgaccggctggacaagcggacgtggacgtacatcttcggcgcgtgctgcgccac 698 Query: 61 gacggtgttcatcccgtcgttccacaactaccggatctggtccttcctggggctgggcat 120 |||||||||||||||||||||||||||||||||||||||||||||||||| || ||||| Sbjct: 699 cacggtgttcatcccgtcgttccacaactaccggatctggtccttcctgggcctcggcat 758 Query: 121 gaccacctacaccgcctggtacctcgccatcgccgcgctcatcaacggccaggtcgaggg 180 ||||||||| ||||| |||||||||||||||||||| ||| |||||||||||| ||| || Sbjct: 759 gaccacctataccgcttggtacctcgccatcgccgccctcctcaacggccaggccgaagg 818 Query: 181 cgtcacccacaccggaccaaacaagctcgtcctctacttcaccggcgccaccaacatcct 240 | ||||||||||||| |||| |||||| || || |||||||||||||||||||||||||| Sbjct: 819 catcacccacaccggtccaaccaagctggtgctgtacttcaccggcgccaccaacatcct 878 Query: 241 ctacaccttcggcggccacgccgtcacagtggagatcatgcacgcgatgtggaagccggc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 879 ctacaccttcggcggccacgccgtcacagtggagatcatgcacgcgatgtggaaaccggc 938 Query: 301 caagttcaagtacatctacctgctggcgacgctgtacgtgttcacgctgacgctgccgtc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 939 caagttcaagtacatctacctgctggcgacgctgtacgtgttcacgctgacgctgccgtc 998 Query: 361 ggcgtcggccatgtactgggcgtacggggacgagctgctggcgcacgccaacgccttctc 420 ||||||||||||||||||||||| |||||||||||||||| | ||| ||||||||||||| Sbjct: 999 ggcgtcggccatgtactgggcgttcggggacgagctgctgacccactccaacgccttctc 1058 Query: 421 gctgctgccca 431 ||||||||||| Sbjct: 1059 gctgctgccca 1069
>dbj|AK100090.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023003J03, full insert sequence Length = 2409 Score = 680 bits (343), Expect = 0.0 Identities = 409/431 (94%) Strand = Plus / Plus Query: 1 catcaacgaccggctggacaagcggacgtggacatacatcttcggcgcgtgctgcgcgac 60 ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| || Sbjct: 1047 catcaacgaccggctggacaagcggacgtggacgtacatcttcggcgcgtgctgcgccac 1106 Query: 61 gacggtgttcatcccgtcgttccacaactaccggatctggtccttcctggggctgggcat 120 |||||||||||||||||||||||||||||||||||||||||||||||||| || ||||| Sbjct: 1107 cacggtgttcatcccgtcgttccacaactaccggatctggtccttcctgggcctcggcat 1166 Query: 121 gaccacctacaccgcctggtacctcgccatcgccgcgctcatcaacggccaggtcgaggg 180 ||||||||| ||||| |||||||||||||||||||| ||| |||||||||||| ||| || Sbjct: 1167 gaccacctataccgcttggtacctcgccatcgccgccctcctcaacggccaggccgaagg 1226 Query: 181 cgtcacccacaccggaccaaacaagctcgtcctctacttcaccggcgccaccaacatcct 240 | ||||||||||||| |||| |||||| || || |||||||||||||||||||||||||| Sbjct: 1227 catcacccacaccggtccaaccaagctggtgctgtacttcaccggcgccaccaacatcct 1286 Query: 241 ctacaccttcggcggccacgccgtcacagtggagatcatgcacgcgatgtggaagccggc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 1287 ctacaccttcggcggccacgccgtcacagtggagatcatgcacgcgatgtggaaaccggc 1346 Query: 301 caagttcaagtacatctacctgctggcgacgctgtacgtgttcacgctgacgctgccgtc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1347 caagttcaagtacatctacctgctggcgacgctgtacgtgttcacgctgacgctgccgtc 1406 Query: 361 ggcgtcggccatgtactgggcgtacggggacgagctgctggcgcacgccaacgccttctc 420 ||||||||||||||||||||||| |||||||||||||||| | ||| ||||||||||||| Sbjct: 1407 ggcgtcggccatgtactgggcgttcggggacgagctgctgacccactccaacgccttctc 1466 Query: 421 gctgctgccca 431 ||||||||||| Sbjct: 1467 gctgctgccca 1477
>dbj|AK068536.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013152G03, full insert sequence Length = 1542 Score = 680 bits (343), Expect = 0.0 Identities = 409/431 (94%) Strand = Plus / Plus Query: 1 catcaacgaccggctggacaagcggacgtggacatacatcttcggcgcgtgctgcgcgac 60 ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| || Sbjct: 213 catcaacgaccggctggacaagcggacgtggacgtacatcttcggcgcgtgctgcgccac 272 Query: 61 gacggtgttcatcccgtcgttccacaactaccggatctggtccttcctggggctgggcat 120 |||||||||||||||||||||||||||||||||||||||||||||||||| || ||||| Sbjct: 273 cacggtgttcatcccgtcgttccacaactaccggatctggtccttcctgggcctcggcat 332 Query: 121 gaccacctacaccgcctggtacctcgccatcgccgcgctcatcaacggccaggtcgaggg 180 ||||||||| ||||| |||||||||||||||||||| ||| |||||||||||| ||| || Sbjct: 333 gaccacctataccgcttggtacctcgccatcgccgccctcctcaacggccaggccgaagg 392 Query: 181 cgtcacccacaccggaccaaacaagctcgtcctctacttcaccggcgccaccaacatcct 240 | ||||||||||||| |||| |||||| || || |||||||||||||||||||||||||| Sbjct: 393 catcacccacaccggtccaaccaagctggtgctgtacttcaccggcgccaccaacatcct 452 Query: 241 ctacaccttcggcggccacgccgtcacagtggagatcatgcacgcgatgtggaagccggc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 453 ctacaccttcggcggccacgccgtcacagtggagatcatgcacgcgatgtggaaaccggc 512 Query: 301 caagttcaagtacatctacctgctggcgacgctgtacgtgttcacgctgacgctgccgtc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 513 caagttcaagtacatctacctgctggcgacgctgtacgtgttcacgctgacgctgccgtc 572 Query: 361 ggcgtcggccatgtactgggcgtacggggacgagctgctggcgcacgccaacgccttctc 420 ||||||||||||||||||||||| |||||||||||||||| | ||| ||||||||||||| Sbjct: 573 ggcgtcggccatgtactgggcgttcggggacgagctgctgacccactccaacgccttctc 632 Query: 421 gctgctgccca 431 ||||||||||| Sbjct: 633 gctgctgccca 643
>gb|AY109327.1| Zea mays CL468_1 mRNA sequence Length = 2907 Score = 609 bits (307), Expect = e-171 Identities = 400/431 (92%) Strand = Plus / Plus Query: 1 catcaacgaccggctggacaagcggacgtggacatacatcttcggcgcgtgctgcgcgac 60 ||||||||||||||||||||||||||| ||||| |||||||||||||| |||||||| || Sbjct: 1259 catcaacgaccggctggacaagcggacatggacgtacatcttcggcgcctgctgcgccac 1318 Query: 61 gacggtgttcatcccgtcgttccacaactaccggatctggtccttcctggggctgggcat 120 ||||||||||||||||| |||||||||||||||||||||||||||||||| || ||||| Sbjct: 1319 cacggtgttcatcccgtccttccacaactaccggatctggtccttcctgggcctcggcat 1378 Query: 121 gaccacctacaccgcctggtacctcgccatcgccgcgctcatcaacggccaggtcgaggg 180 ||||||||||||||| |||||||||||||||||||||||| |||||||||||| ||| || Sbjct: 1379 gaccacctacaccgcgtggtacctcgccatcgccgcgctcctcaacggccaggccgaagg 1438 Query: 181 cgtcacccacaccggaccaaacaagctcgtcctctacttcaccggcgccaccaacatcct 240 ||| | ||| |||| || | ||||||||| ||||||||||||||||||||||||||||| Sbjct: 1439 cgtggcgcactccggccccaccaagctcgtgctctacttcaccggcgccaccaacatcct 1498 Query: 241 ctacaccttcggcggccacgccgtcacagtggagatcatgcacgcgatgtggaagccggc 300 |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 1499 ctacaccttcggcggccacgccgtcacagtcgagatcatgcacgcgatgtggaagcccgc 1558 Query: 301 caagttcaagtacatctacctgctggcgacgctgtacgtgttcacgctgacgctgccgtc 360 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1559 caagttcaaatacatctacctgctggcgacgctgtacgtgttcacgctgacgctgccgtc 1618 Query: 361 ggcgtcggccatgtactgggcgtacggggacgagctgctggcgcacgccaacgccttctc 420 | || |||||||||||||||||| ||| |||||||||||| | ||| | ||||||||||| Sbjct: 1619 gtcggcggccatgtactgggcgttcggcgacgagctgctgacccactcgaacgccttctc 1678 Query: 421 gctgctgccca 431 ||||||||||| Sbjct: 1679 gctgctgccca 1689
>gb|BT008974.1| Triticum aestivum clone wdk2c.pk0002.a4:fis, full insert mRNA sequence Length = 1248 Score = 529 bits (267), Expect = e-147 Identities = 308/319 (96%), Gaps = 2/319 (0%) Strand = Plus / Plus Query: 138 ggtacctcgccatcgccgcgctcatcaacggccaggtcgagggcgtcacccacaccggac 197 ||||||| ||||||||||||||||||||||| ||||| |||||||||||||||||||| | Sbjct: 8 ggtacctggccatcgccgcgctcatcaacgggcaggtggagggcgtcacccacaccggcc 67 Query: 198 caaacaagctcgtcctctacttcaccggcgccaccaacatcctctacaccttcggcggcc 257 | |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | Sbjct: 68 ccaacaagctcgtcctctacttcaccggcgccaccaacatcctctacaccttcg-cggac 126 Query: 258 acgccgtcacagtggagatcatgcacgcgatgtggaagccggccaagttcaagtacatct 317 |||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127 acgcagtcactgtggagatcatgcacgcgatgtggaagccggccaagttcaagtacatct 186 Query: 318 acctgctggcgacgctgtacgtgttcacgctgacgctgccgtcggcgtcggccatgtact 377 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 187 acctgctggcgacgctgtacgtgttcacgctgacgctgccgtcggcgtcggccatgtact 246 Query: 378 gggcgtacggggacgagctgctggcgcacgccaacgccttctcgctgctgccc-agacgg 436 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 247 gggcgtacggggacgagctgctggcgcacgccaacgccttctcgctgctgcccaagacgg 306 Query: 437 cgtggcgggacgccgccgt 455 ||||||||||||| ||||| Sbjct: 307 cgtggcgggacgcggccgt 325
>dbj|AK111849.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023145B14, full insert sequence Length = 1961 Score = 494 bits (249), Expect = e-136 Identities = 384/429 (89%) Strand = Plus / Plus Query: 1 catcaacgaccggctggacaagcggacgtggacatacatcttcggcgcgtgctgcgcgac 60 |||||||||||||||||||||| |||| ||||| ||||| ||||| ||||||||| | || Sbjct: 677 catcaacgaccggctggacaagaggacatggacgtacatattcggggcgtgctgctccac 736 Query: 61 gacggtgttcatcccgtcgttccacaactaccggatctggtccttcctggggctgggcat 120 |||||||||||||| || |||||||||||||| |||||||||||||| || || ||||| Sbjct: 737 cacggtgttcatcccctccttccacaactaccgcatctggtccttccttggcctcggcat 796 Query: 121 gaccacctacaccgcctggtacctcgccatcgccgcgctcatcaacggccaggtcgaggg 180 |||||||||||||||||||||||||||||||||||| | || ||||||||||||| || Sbjct: 797 gaccacctacaccgcctggtacctcgccatcgccgccgccgtccacggccaggtcgacgg 856 Query: 181 cgtcacccacaccggaccaaacaagctcgtcctctacttcaccggcgccaccaacatcct 240 ||| || ||| | || || | |||| | || ||||||||||| ||||||||||||||||| Sbjct: 857 cgtgacgcactcgggcccgagcaagatggtgctctacttcactggcgccaccaacatcct 916 Query: 241 ctacaccttcggcggccacgccgtcacagtggagatcatgcacgcgatgtggaagccggc 300 |||||| |||||||| ||||||||||| || ||||||||||||||||||||||||||| Sbjct: 917 ctacactttcggcggacacgccgtcactgtagagatcatgcacgcgatgtggaagccgca 976 Query: 301 caagttcaagtacatctacctgctggcgacgctgtacgtgttcacgctgacgctgccgtc 360 ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 977 gaagttcaagtacatctacctggtggcgacgctgtacgtgttcacgctgacgctgccgtc 1036 Query: 361 ggcgtcggccatgtactgggcgtacggggacgagctgctggcgcacgccaacgccttctc 420 ||||||||||||||||||||||| ||| |||| ||||||| ||||| | ||||||||||| Sbjct: 1037 ggcgtcggccatgtactgggcgttcggcgacgcgctgctgacgcactcgaacgccttctc 1096 Query: 421 gctgctgcc 429 ||||||||| Sbjct: 1097 gctgctgcc 1105
>dbj|AK111659.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013151H06, full insert sequence Length = 2264 Score = 494 bits (249), Expect = e-136 Identities = 384/429 (89%) Strand = Plus / Plus Query: 1 catcaacgaccggctggacaagcggacgtggacatacatcttcggcgcgtgctgcgcgac 60 |||||||||||||||||||||| |||| ||||| ||||| ||||| ||||||||| | || Sbjct: 980 catcaacgaccggctggacaagaggacatggacgtacatattcggggcgtgctgctccac 1039 Query: 61 gacggtgttcatcccgtcgttccacaactaccggatctggtccttcctggggctgggcat 120 |||||||||||||| || |||||||||||||| |||||||||||||| || || ||||| Sbjct: 1040 cacggtgttcatcccctccttccacaactaccgcatctggtccttccttggcctcggcat 1099 Query: 121 gaccacctacaccgcctggtacctcgccatcgccgcgctcatcaacggccaggtcgaggg 180 |||||||||||||||||||||||||||||||||||| | || ||||||||||||| || Sbjct: 1100 gaccacctacaccgcctggtacctcgccatcgccgccgccgtccacggccaggtcgacgg 1159 Query: 181 cgtcacccacaccggaccaaacaagctcgtcctctacttcaccggcgccaccaacatcct 240 ||| || ||| | || || | |||| | || ||||||||||| ||||||||||||||||| Sbjct: 1160 cgtgacgcactcgggcccgagcaagatggtgctctacttcactggcgccaccaacatcct 1219 Query: 241 ctacaccttcggcggccacgccgtcacagtggagatcatgcacgcgatgtggaagccggc 300 |||||| |||||||| ||||||||||| || ||||||||||||||||||||||||||| Sbjct: 1220 ctacactttcggcggacacgccgtcactgtagagatcatgcacgcgatgtggaagccgca 1279 Query: 301 caagttcaagtacatctacctgctggcgacgctgtacgtgttcacgctgacgctgccgtc 360 ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 1280 gaagttcaagtacatctacctggtggcgacgctgtacgtgttcacgctgacgctgccgtc 1339 Query: 361 ggcgtcggccatgtactgggcgtacggggacgagctgctggcgcacgccaacgccttctc 420 ||||||||||||||||||||||| ||| |||| ||||||| ||||| | ||||||||||| Sbjct: 1340 ggcgtcggccatgtactgggcgttcggcgacgcgctgctgacgcactcgaacgccttctc 1399 Query: 421 gctgctgcc 429 ||||||||| Sbjct: 1400 gctgctgcc 1408
>dbj|AK103524.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033131K12, full insert sequence Length = 1964 Score = 387 bits (195), Expect = e-104 Identities = 348/399 (87%) Strand = Plus / Plus Query: 1 catcaacgaccggctggacaagcggacgtggacatacatcttcggcgcgtgctgcgcgac 60 |||||||||| |||||||||| |||||||||| |||||||||||||||||||||||||| Sbjct: 617 catcaacgacaagctggacaagaggacgtggacctacatcttcggcgcgtgctgcgcgac 676 Query: 61 gacggtgttcatcccgtcgttccacaactaccggatctggtccttcctggggctgggcat 120 |||||||||||||||||||||||||||||||||||||||||| ||||| || || | ||| Sbjct: 677 gacggtgttcatcccgtcgttccacaactaccggatctggtcattcctcggcctcgtcat 736 Query: 121 gaccacctacaccgcctggtacctcgccatcgccgcgctcatcaacggccaggtcgaggg 180 |||||||||||| ||||||||||||||| ||||| | |||||| | ||||||||||| || Sbjct: 737 gaccacctacacggcctggtacctcgccgtcgcctccctcatccatggccaggtcgatgg 796 Query: 181 cgtcacccacaccggaccaaacaagctcgtcctctacttcaccggcgccaccaacatcct 240 || | ||| | || || | ||| | ||||||||||||||||| ||||| ||||| || Sbjct: 797 agtgaagcactcgggccctacaaagatggtcctctacttcaccggggccacaaacattct 856 Query: 241 ctacaccttcggcggccacgccgtcacagtggagatcatgcacgcgatgtggaagccggc 300 |||||||||||| || ||||| || || ||||||||||||||||||||||||| |||| Sbjct: 857 ctacaccttcggtgggcacgctgttactgtggagatcatgcacgcgatgtggaggccgca 916 Query: 301 caagttcaagtacatctacctgctggcgacgctgtacgtgttcacgctgacgctgccgtc 360 ||||||||| ||||||||| ||||||||||||||||| | ||||||||||||||||| Sbjct: 917 gaagttcaaggcgatctacctgatggcgacgctgtacgtgctgacgctgacgctgccgtc 976 Query: 361 ggcgtcggccatgtactgggcgtacggggacgagctgct 399 |||| || | |||||||||||| ||||||||||||||| Sbjct: 977 ggcggcgagcgtgtactgggcgttcggggacgagctgct 1015
>ref|NM_194844.1| Oryza sativa (japonica cultivar-group) putative AUX1-like permease (OSJNBb0016M10.2), mRNA Length = 1644 Score = 337 bits (170), Expect = 2e-89 Identities = 386/454 (85%), Gaps = 3/454 (0%) Strand = Plus / Plus Query: 1 catcaacgaccggctggacaagcggacgtggacatacatcttcggcgcgtgctgcgcgac 60 ||||||||||| |||||||||||||| ||||| |||||||||||||| |||||||| || Sbjct: 534 catcaacgaccatctggacaagcggacatggacgtacatcttcggcgcctgctgcgccac 593 Query: 61 gacggtgttcatcccgtcgttccacaactaccggatctggtccttcctggggctgggcat 120 || || ||||||||||| |||||||||||||| || ||||||||||| || || ||| Sbjct: 594 caccgtcttcatcccgtcattccacaactaccgcatttggtccttcctcggcctcctcat 653 Query: 121 gaccacctacaccgcctggtacctcgccatcgccgcgctcatcaacggccaggtcgaggg 180 |||||||||||||||||||||| ||||| ||||| | |||||| |||| ||||| ||||| Sbjct: 654 gaccacctacaccgcctggtacatcgccgtcgcctccctcatccacggacaggtggaggg 713 Query: 181 cgtcacccacaccggaccaaacaagc-tcgtcctctacttcaccggcgccaccaacatcc 239 || | ||| | || || | ||||| |||| ||||||||||| || ||||||||||||| Sbjct: 714 tgtggcgcactctgggccca-caagcatcgtgctctacttcacgggggccaccaacatcc 772 Query: 240 tctacaccttcggcggccacgccgtcacagtggagatcatgcacgcgatgtggaagccgg 299 ||||||||||||| |||||||| ||||| |||||||| ||||||||||||||| |||| Sbjct: 773 tctacaccttcgggggccacgctgtcaccgtggagataatgcacgcgatgtggcggccgc 832 Query: 300 ccaagttcaagtacatctacctgctggcgacgctgtacgtgttcacgctgacgctgccgt 359 ||||||||| |||||||||||||||||| |||||||| | |||||||||||||||| Sbjct: 833 agaagttcaaggcgatctacctgctggcgacggtgtacgtgctgacgctgacgctgccgt 892 Query: 360 cggcgtcggccatgtactgggcgtacggggacgagctgctggcgcacgccaacgccttct 419 |||||||||| ||||||||||| |||||||| ||||||| ||||| | ||||| | Sbjct: 893 cggcgtcggcggcgtactgggcgttcggggacgcgctgctgacgcactcgaacgcgctgg 952 Query: 420 cgctgctgcc-cagacggcgtggcgggacgccgc 452 |||||||||| | |||| ||||||| |||||||| Sbjct: 953 cgctgctgccgcggacgccgtggcgcgacgccgc 986
>dbj|AK102729.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033105O21, full insert sequence Length = 2015 Score = 337 bits (170), Expect = 2e-89 Identities = 386/454 (85%), Gaps = 3/454 (0%) Strand = Plus / Plus Query: 1 catcaacgaccggctggacaagcggacgtggacatacatcttcggcgcgtgctgcgcgac 60 ||||||||||| |||||||||||||| ||||| |||||||||||||| |||||||| || Sbjct: 654 catcaacgaccatctggacaagcggacatggacgtacatcttcggcgcctgctgcgccac 713 Query: 61 gacggtgttcatcccgtcgttccacaactaccggatctggtccttcctggggctgggcat 120 || || ||||||||||| |||||||||||||| || ||||||||||| || || ||| Sbjct: 714 caccgtcttcatcccgtcattccacaactaccgcatttggtccttcctcggcctcctcat 773 Query: 121 gaccacctacaccgcctggtacctcgccatcgccgcgctcatcaacggccaggtcgaggg 180 |||||||||||||||||||||| ||||| ||||| | |||||| |||| ||||| ||||| Sbjct: 774 gaccacctacaccgcctggtacatcgccgtcgcctccctcatccacggacaggtggaggg 833 Query: 181 cgtcacccacaccggaccaaacaagc-tcgtcctctacttcaccggcgccaccaacatcc 239 || | ||| | || || | ||||| |||| ||||||||||| || ||||||||||||| Sbjct: 834 tgtggcgcactctgggccca-caagcatcgtgctctacttcacgggggccaccaacatcc 892 Query: 240 tctacaccttcggcggccacgccgtcacagtggagatcatgcacgcgatgtggaagccgg 299 ||||||||||||| |||||||| ||||| |||||||| ||||||||||||||| |||| Sbjct: 893 tctacaccttcgggggccacgctgtcaccgtggagataatgcacgcgatgtggcggccgc 952 Query: 300 ccaagttcaagtacatctacctgctggcgacgctgtacgtgttcacgctgacgctgccgt 359 ||||||||| |||||||||||||||||| |||||||| | |||||||||||||||| Sbjct: 953 agaagttcaaggcgatctacctgctggcgacggtgtacgtgctgacgctgacgctgccgt 1012 Query: 360 cggcgtcggccatgtactgggcgtacggggacgagctgctggcgcacgccaacgccttct 419 |||||||||| ||||||||||| |||||||| ||||||| ||||| | ||||| | Sbjct: 1013 cggcgtcggcggcgtactgggcgttcggggacgcgctgctgacgcactcgaacgcgctgg 1072 Query: 420 cgctgctgcc-cagacggcgtggcgggacgccgc 452 |||||||||| | |||| ||||||| |||||||| Sbjct: 1073 cgctgctgccgcggacgccgtggcgcgacgccgc 1106
>dbj|AK102295.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033089L08, full insert sequence Length = 2106 Score = 337 bits (170), Expect = 2e-89 Identities = 386/454 (85%), Gaps = 3/454 (0%) Strand = Plus / Plus Query: 1 catcaacgaccggctggacaagcggacgtggacatacatcttcggcgcgtgctgcgcgac 60 ||||||||||| |||||||||||||| ||||| |||||||||||||| |||||||| || Sbjct: 659 catcaacgaccatctggacaagcggacatggacgtacatcttcggcgcctgctgcgccac 718 Query: 61 gacggtgttcatcccgtcgttccacaactaccggatctggtccttcctggggctgggcat 120 || || ||||||||||| |||||||||||||| || ||||||||||| || || ||| Sbjct: 719 caccgtcttcatcccgtcattccacaactaccgcatttggtccttcctcggcctcctcat 778 Query: 121 gaccacctacaccgcctggtacctcgccatcgccgcgctcatcaacggccaggtcgaggg 180 |||||||||||||||||||||| ||||| ||||| | |||||| |||| ||||| ||||| Sbjct: 779 gaccacctacaccgcctggtacatcgccgtcgcctccctcatccacggacaggtggaggg 838 Query: 181 cgtcacccacaccggaccaaacaagc-tcgtcctctacttcaccggcgccaccaacatcc 239 || | ||| | || || | ||||| |||| ||||||||||| || ||||||||||||| Sbjct: 839 tgtggcgcactctgggccca-caagcatcgtgctctacttcacgggggccaccaacatcc 897 Query: 240 tctacaccttcggcggccacgccgtcacagtggagatcatgcacgcgatgtggaagccgg 299 ||||||||||||| |||||||| ||||| |||||||| ||||||||||||||| |||| Sbjct: 898 tctacaccttcgggggccacgctgtcaccgtggagataatgcacgcgatgtggcggccgc 957 Query: 300 ccaagttcaagtacatctacctgctggcgacgctgtacgtgttcacgctgacgctgccgt 359 ||||||||| |||||||||||||||||| |||||||| | |||||||||||||||| Sbjct: 958 agaagttcaaggcgatctacctgctggcgacggtgtacgtgctgacgctgacgctgccgt 1017 Query: 360 cggcgtcggccatgtactgggcgtacggggacgagctgctggcgcacgccaacgccttct 419 |||||||||| ||||||||||| |||||||| ||||||| ||||| | ||||| | Sbjct: 1018 cggcgtcggcggcgtactgggcgttcggggacgcgctgctgacgcactcgaacgcgctgg 1077 Query: 420 cgctgctgcc-cagacggcgtggcgggacgccgc 452 |||||||||| | |||| ||||||| |||||||| Sbjct: 1078 cgctgctgccgcggacgccgtggcgcgacgccgc 1111
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 280 bits (141), Expect = 4e-72 Identities = 156/161 (96%) Strand = Plus / Plus Query: 271 ggagatcatgcacgcgatgtggaagccggccaagttcaagtacatctacctgctggcgac 330 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 36995563 ggagatcatgcacgcgatgtggaaaccggccaagttcaagtacatctacctgctggcgac 36995622 Query: 331 gctgtacgtgttcacgctgacgctgccgtcggcgtcggccatgtactgggcgtacgggga 390 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 36995623 gctgtacgtgttcacgctgacgctgccgtcggcgtcggccatgtactgggcgttcgggga 36995682 Query: 391 cgagctgctggcgcacgccaacgccttctcgctgctgccca 431 |||||||||| | ||| |||||||||||||||||||||||| Sbjct: 36995683 cgagctgctgacccactccaacgccttctcgctgctgccca 36995723 Score = 274 bits (138), Expect = 2e-70 Identities = 165/174 (94%) Strand = Plus / Plus Query: 1 catcaacgaccggctggacaagcggacgtggacatacatcttcggcgcgtgctgcgcgac 60 ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| || Sbjct: 36993516 catcaacgaccggctggacaagcggacgtggacgtacatcttcggcgcgtgctgcgccac 36993575 Query: 61 gacggtgttcatcccgtcgttccacaactaccggatctggtccttcctggggctgggcat 120 |||||||||||||||||||||||||||||||||||||||||||||||||| || ||||| Sbjct: 36993576 cacggtgttcatcccgtcgttccacaactaccggatctggtccttcctgggcctcggcat 36993635 Query: 121 gaccacctacaccgcctggtacctcgccatcgccgcgctcatcaacggccaggt 174 ||||||||| ||||| |||||||||||||||||||| ||| ||||||||||||| Sbjct: 36993636 gaccacctataccgcttggtacctcgccatcgccgccctcctcaacggccaggt 36993689 Score = 139 bits (70), Expect = 9e-30 Identities = 94/102 (92%) Strand = Plus / Plus Query: 170 caggtcgagggcgtcacccacaccggaccaaacaagctcgtcctctacttcaccggcgcc 229 |||| ||| ||| ||||||||||||| |||| |||||| || || ||||||||||||||| Sbjct: 36993796 caggccgaaggcatcacccacaccggtccaaccaagctggtgctgtacttcaccggcgcc 36993855 Query: 230 accaacatcctctacaccttcggcggccacgccgtcacagtg 271 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 36993856 accaacatcctctacaccttcggcggccacgccgtcacagtg 36993897
>dbj|AP003415.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1402_H07 Length = 140620 Score = 280 bits (141), Expect = 4e-72 Identities = 156/161 (96%) Strand = Plus / Plus Query: 271 ggagatcatgcacgcgatgtggaagccggccaagttcaagtacatctacctgctggcgac 330 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 85867 ggagatcatgcacgcgatgtggaaaccggccaagttcaagtacatctacctgctggcgac 85926 Query: 331 gctgtacgtgttcacgctgacgctgccgtcggcgtcggccatgtactgggcgtacgggga 390 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 85927 gctgtacgtgttcacgctgacgctgccgtcggcgtcggccatgtactgggcgttcgggga 85986 Query: 391 cgagctgctggcgcacgccaacgccttctcgctgctgccca 431 |||||||||| | ||| |||||||||||||||||||||||| Sbjct: 85987 cgagctgctgacccactccaacgccttctcgctgctgccca 86027 Score = 274 bits (138), Expect = 2e-70 Identities = 165/174 (94%) Strand = Plus / Plus Query: 1 catcaacgaccggctggacaagcggacgtggacatacatcttcggcgcgtgctgcgcgac 60 ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| || Sbjct: 83820 catcaacgaccggctggacaagcggacgtggacgtacatcttcggcgcgtgctgcgccac 83879 Query: 61 gacggtgttcatcccgtcgttccacaactaccggatctggtccttcctggggctgggcat 120 |||||||||||||||||||||||||||||||||||||||||||||||||| || ||||| Sbjct: 83880 cacggtgttcatcccgtcgttccacaactaccggatctggtccttcctgggcctcggcat 83939 Query: 121 gaccacctacaccgcctggtacctcgccatcgccgcgctcatcaacggccaggt 174 ||||||||| ||||| |||||||||||||||||||| ||| ||||||||||||| Sbjct: 83940 gaccacctataccgcttggtacctcgccatcgccgccctcctcaacggccaggt 83993 Score = 139 bits (70), Expect = 9e-30 Identities = 94/102 (92%) Strand = Plus / Plus Query: 170 caggtcgagggcgtcacccacaccggaccaaacaagctcgtcctctacttcaccggcgcc 229 |||| ||| ||| ||||||||||||| |||| |||||| || || ||||||||||||||| Sbjct: 84100 caggccgaaggcatcacccacaccggtccaaccaagctggtgctgtacttcaccggcgcc 84159 Query: 230 accaacatcctctacaccttcggcggccacgccgtcacagtg 271 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 84160 accaacatcctctacaccttcggcggccacgccgtcacagtg 84201
>gb|AC135421.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0012G21, complete sequence Length = 135750 Score = 234 bits (118), Expect = 2e-58 Identities = 148/158 (93%) Strand = Plus / Minus Query: 272 gagatcatgcacgcgatgtggaagccggccaagttcaagtacatctacctgctggcgacg 331 ||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||| Sbjct: 35904 gagatcatgcacgcgatgtggaagccgcagaagttcaagtacatctacctggtggcgacg 35845 Query: 332 ctgtacgtgttcacgctgacgctgccgtcggcgtcggccatgtactgggcgtacggggac 391 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||| Sbjct: 35844 ctgtacgtgttcacgctgacgctgccgtcggcgtcggccatgtactgggcgttcggcgac 35785 Query: 392 gagctgctggcgcacgccaacgccttctcgctgctgcc 429 | ||||||| ||||| | |||||||||||||||||||| Sbjct: 35784 gcgctgctgacgcactcgaacgccttctcgctgctgcc 35747 Score = 198 bits (100), Expect = 1e-47 Identities = 142/156 (91%) Strand = Plus / Minus Query: 1 catcaacgaccggctggacaagcggacgtggacatacatcttcggcgcgtgctgcgcgac 60 |||||||||||||||||||||| |||| ||||| ||||| ||||| ||||||||| | || Sbjct: 37759 catcaacgaccggctggacaagaggacatggacgtacatattcggggcgtgctgctccac 37700 Query: 61 gacggtgttcatcccgtcgttccacaactaccggatctggtccttcctggggctgggcat 120 |||||||||||||| || |||||||||||||| |||||||||||||| || || ||||| Sbjct: 37699 cacggtgttcatcccctccttccacaactaccgcatctggtccttccttggcctcggcat 37640 Query: 121 gaccacctacaccgcctggtacctcgccatcgccgc 156 |||||||||||||||||||||||||||||||||||| Sbjct: 37639 gaccacctacaccgcctggtacctcgccatcgccgc 37604 Score = 87.7 bits (44), Expect = 3e-14 Identities = 53/56 (94%) Strand = Plus / Minus Query: 212 ctctacttcaccggcgccaccaacatcctctacaccttcggcggccacgccgtcac 267 ||||||||||| ||||||||||||||||||||||| |||||||| ||||||||||| Sbjct: 37363 ctctacttcactggcgccaccaacatcctctacactttcggcggacacgccgtcac 37308
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 234 bits (118), Expect = 2e-58 Identities = 148/158 (93%) Strand = Plus / Minus Query: 272 gagatcatgcacgcgatgtggaagccggccaagttcaagtacatctacctgctggcgacg 331 ||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||| Sbjct: 21783495 gagatcatgcacgcgatgtggaagccgcagaagttcaagtacatctacctggtggcgacg 21783436 Query: 332 ctgtacgtgttcacgctgacgctgccgtcggcgtcggccatgtactgggcgtacggggac 391 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||| Sbjct: 21783435 ctgtacgtgttcacgctgacgctgccgtcggcgtcggccatgtactgggcgttcggcgac 21783376 Query: 392 gagctgctggcgcacgccaacgccttctcgctgctgcc 429 | ||||||| ||||| | |||||||||||||||||||| Sbjct: 21783375 gcgctgctgacgcactcgaacgccttctcgctgctgcc 21783338 Score = 198 bits (100), Expect = 1e-47 Identities = 142/156 (91%) Strand = Plus / Minus Query: 1 catcaacgaccggctggacaagcggacgtggacatacatcttcggcgcgtgctgcgcgac 60 |||||||||||||||||||||| |||| ||||| ||||| ||||| ||||||||| | || Sbjct: 21785350 catcaacgaccggctggacaagaggacatggacgtacatattcggggcgtgctgctccac 21785291 Query: 61 gacggtgttcatcccgtcgttccacaactaccggatctggtccttcctggggctgggcat 120 |||||||||||||| || |||||||||||||| |||||||||||||| || || ||||| Sbjct: 21785290 cacggtgttcatcccctccttccacaactaccgcatctggtccttccttggcctcggcat 21785231 Query: 121 gaccacctacaccgcctggtacctcgccatcgccgc 156 |||||||||||||||||||||||||||||||||||| Sbjct: 21785230 gaccacctacaccgcctggtacctcgccatcgccgc 21785195 Score = 87.7 bits (44), Expect = 3e-14 Identities = 53/56 (94%) Strand = Plus / Minus Query: 212 ctctacttcaccggcgccaccaacatcctctacaccttcggcggccacgccgtcac 267 ||||||||||| ||||||||||||||||||||||| |||||||| ||||||||||| Sbjct: 21784954 ctctacttcactggcgccaccaacatcctctacactttcggcggacacgccgtcac 21784899
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 226 bits (114), Expect = 5e-56 Identities = 159/174 (91%) Strand = Plus / Plus Query: 1 catcaacgaccggctggacaagcggacgtggacatacatcttcggcgcgtgctgcgcgac 60 |||||||||| |||||||||| |||||||||| |||||||||||||||||||||||||| Sbjct: 7617200 catcaacgacaagctggacaagaggacgtggacctacatcttcggcgcgtgctgcgcgac 7617259 Query: 61 gacggtgttcatcccgtcgttccacaactaccggatctggtccttcctggggctgggcat 120 |||||||||||||||||||||||||||||||||||||||||| ||||| || || | ||| Sbjct: 7617260 gacggtgttcatcccgtcgttccacaactaccggatctggtcattcctcggcctcgtcat 7617319 Query: 121 gaccacctacaccgcctggtacctcgccatcgccgcgctcatcaacggccaggt 174 |||||||||||| ||||||||||||||| ||||| | |||||| | |||||||| Sbjct: 7617320 gaccacctacacggcctggtacctcgccgtcgcctccctcatccatggccaggt 7617373 Score = 137 bits (69), Expect = 4e-29 Identities = 114/129 (88%) Strand = Plus / Plus Query: 271 ggagatcatgcacgcgatgtggaagccggccaagttcaagtacatctacctgctggcgac 330 ||||||||||||||||||||||| |||| ||||||||| ||||||||| ||||||| Sbjct: 7618278 ggagatcatgcacgcgatgtggaggccgcagaagttcaaggcgatctacctgatggcgac 7618337 Query: 331 gctgtacgtgttcacgctgacgctgccgtcggcgtcggccatgtactgggcgtacgggga 390 |||||||||| | ||||||||||||||||||||| || | |||||||||||| |||||| Sbjct: 7618338 gctgtacgtgctgacgctgacgctgccgtcggcggcgagcgtgtactgggcgttcgggga 7618397 Query: 391 cgagctgct 399 ||||||||| Sbjct: 7618398 cgagctgct 7618406 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 209 gtcctctacttcaccggcgccaccaacatcctctacaccttcggcggccacgc 261 ||||||||||||||||| ||||| ||||| |||||||||||||| || ||||| Sbjct: 7617544 gtcctctacttcaccggggccacaaacattctctacaccttcggtgggcacgc 7617596
>gb|AC129008.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0096L14, from chromosome 3, complete sequence Length = 131142 Score = 226 bits (114), Expect = 5e-56 Identities = 159/174 (91%) Strand = Plus / Minus Query: 1 catcaacgaccggctggacaagcggacgtggacatacatcttcggcgcgtgctgcgcgac 60 |||||||||| |||||||||| |||||||||| |||||||||||||||||||||||||| Sbjct: 98090 catcaacgacaagctggacaagaggacgtggacctacatcttcggcgcgtgctgcgcgac 98031 Query: 61 gacggtgttcatcccgtcgttccacaactaccggatctggtccttcctggggctgggcat 120 |||||||||||||||||||||||||||||||||||||||||| ||||| || || | ||| Sbjct: 98030 gacggtgttcatcccgtcgttccacaactaccggatctggtcattcctcggcctcgtcat 97971 Query: 121 gaccacctacaccgcctggtacctcgccatcgccgcgctcatcaacggccaggt 174 |||||||||||| ||||||||||||||| ||||| | |||||| | |||||||| Sbjct: 97970 gaccacctacacggcctggtacctcgccgtcgcctccctcatccatggccaggt 97917 Score = 137 bits (69), Expect = 4e-29 Identities = 114/129 (88%) Strand = Plus / Minus Query: 271 ggagatcatgcacgcgatgtggaagccggccaagttcaagtacatctacctgctggcgac 330 ||||||||||||||||||||||| |||| ||||||||| ||||||||| ||||||| Sbjct: 97012 ggagatcatgcacgcgatgtggaggccgcagaagttcaaggcgatctacctgatggcgac 96953 Query: 331 gctgtacgtgttcacgctgacgctgccgtcggcgtcggccatgtactgggcgtacgggga 390 |||||||||| | ||||||||||||||||||||| || | |||||||||||| |||||| Sbjct: 96952 gctgtacgtgctgacgctgacgctgccgtcggcggcgagcgtgtactgggcgttcgggga 96893 Query: 391 cgagctgct 399 ||||||||| Sbjct: 96892 cgagctgct 96884 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Minus Query: 209 gtcctctacttcaccggcgccaccaacatcctctacaccttcggcggccacgc 261 ||||||||||||||||| ||||| ||||| |||||||||||||| || ||||| Sbjct: 97746 gtcctctacttcaccggggccacaaacattctctacaccttcggtgggcacgc 97694
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 226 bits (114), Expect = 5e-56 Identities = 159/174 (91%) Strand = Plus / Plus Query: 1 catcaacgaccggctggacaagcggacgtggacatacatcttcggcgcgtgctgcgcgac 60 |||||||||| |||||||||| |||||||||| |||||||||||||||||||||||||| Sbjct: 7615035 catcaacgacaagctggacaagaggacgtggacctacatcttcggcgcgtgctgcgcgac 7615094 Query: 61 gacggtgttcatcccgtcgttccacaactaccggatctggtccttcctggggctgggcat 120 |||||||||||||||||||||||||||||||||||||||||| ||||| || || | ||| Sbjct: 7615095 gacggtgttcatcccgtcgttccacaactaccggatctggtcattcctcggcctcgtcat 7615154 Query: 121 gaccacctacaccgcctggtacctcgccatcgccgcgctcatcaacggccaggt 174 |||||||||||| ||||||||||||||| ||||| | |||||| | |||||||| Sbjct: 7615155 gaccacctacacggcctggtacctcgccgtcgcctccctcatccatggccaggt 7615208 Score = 137 bits (69), Expect = 4e-29 Identities = 114/129 (88%) Strand = Plus / Plus Query: 271 ggagatcatgcacgcgatgtggaagccggccaagttcaagtacatctacctgctggcgac 330 ||||||||||||||||||||||| |||| ||||||||| ||||||||| ||||||| Sbjct: 7616113 ggagatcatgcacgcgatgtggaggccgcagaagttcaaggcgatctacctgatggcgac 7616172 Query: 331 gctgtacgtgttcacgctgacgctgccgtcggcgtcggccatgtactgggcgtacgggga 390 |||||||||| | ||||||||||||||||||||| || | |||||||||||| |||||| Sbjct: 7616173 gctgtacgtgctgacgctgacgctgccgtcggcggcgagcgtgtactgggcgttcgggga 7616232 Query: 391 cgagctgct 399 ||||||||| Sbjct: 7616233 cgagctgct 7616241 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 209 gtcctctacttcaccggcgccaccaacatcctctacaccttcggcggccacgc 261 ||||||||||||||||| ||||| ||||| |||||||||||||| || ||||| Sbjct: 7615379 gtcctctacttcaccggggccacaaacattctctacaccttcggtgggcacgc 7615431
>gb|AC147812.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0073K23 map near R10571S, complete sequence Length = 161073 Score = 210 bits (106), Expect = 3e-51 Identities = 209/242 (86%), Gaps = 1/242 (0%) Strand = Plus / Plus Query: 212 ctctacttcaccggcgccaccaacatcctctacaccttcggcggccacgccgtcacagtg 271 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| || ||| Sbjct: 90206 ctctacttcaccggcgccaccaacatcctctacacgttcggcggccacgccgtgacggtg 90265 Query: 272 gagatcatgcacgcgatgtggaagccggccaagttcaagtacatctacctgctggcgacg 331 |||||||||||||| ||||||| |||| ||||||| |||||||| |||||| Sbjct: 90266 gagatcatgcacgccatgtggaggccgcggcggttcaagatgatctacctcgccgcgacg 90325 Query: 332 ctgtacgtgttcacgctgacgctgccgtcggcgtcggccatgtactgggcgtacggggac 391 ||||||| | ||||||||||||||||||||| |||| ||||||||||||| ||||||| Sbjct: 90326 gcgtacgtgctgacgctgacgctgccgtcggcggcggcgatgtactgggcgttcggggac 90385 Query: 392 gagctgctggcgcacgccaacgccttctcgctgctgcc-cagacggcgtggcgggacgcc 450 | |||||||| ||| ||||||||||| |||||||||| | |||| ||||||| |||||| Sbjct: 90386 gcgctgctggaccactccaacgccttcgcgctgctgccgcggacgccgtggcgcgacgcc 90445 Query: 451 gc 452 || Sbjct: 90446 gc 90447 Score = 135 bits (68), Expect = 1e-28 Identities = 134/156 (85%) Strand = Plus / Plus Query: 1 catcaacgaccggctggacaagcggacgtggacatacatcttcggcgcgtgctgcgcgac 60 |||||||||||| || ||||||||||| ||||| ||||||||||| || |||||||| || Sbjct: 89989 catcaacgaccgcctcgacaagcggacatggacctacatcttcggggcttgctgcgccac 90048 Query: 61 gacggtgttcatcccgtcgttccacaactaccggatctggtccttcctggggctgggcat 120 ||||||||| ||||||| |||||||||||||| ||||||||||||| || || ||| Sbjct: 90049 cacggtgttcgtcccgtccttccacaactaccgcgtctggtccttcctcggcctcctcat 90108 Query: 121 gaccacctacaccgcctggtacctcgccatcgccgc 156 ||| |||||||||| ||||||||| || ||||||| Sbjct: 90109 gacgtcctacaccgcgtggtacctcaccgtcgccgc 90144
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 210 bits (106), Expect = 3e-51 Identities = 209/242 (86%), Gaps = 1/242 (0%) Strand = Plus / Minus Query: 212 ctctacttcaccggcgccaccaacatcctctacaccttcggcggccacgccgtcacagtg 271 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| || ||| Sbjct: 3324088 ctctacttcaccggcgccaccaacatcctctacacgttcggcggccacgccgtgacggtg 3324029 Query: 272 gagatcatgcacgcgatgtggaagccggccaagttcaagtacatctacctgctggcgacg 331 |||||||||||||| ||||||| |||| ||||||| |||||||| |||||| Sbjct: 3324028 gagatcatgcacgccatgtggaggccgcggcggttcaagatgatctacctcgccgcgacg 3323969 Query: 332 ctgtacgtgttcacgctgacgctgccgtcggcgtcggccatgtactgggcgtacggggac 391 ||||||| | ||||||||||||||||||||| |||| ||||||||||||| ||||||| Sbjct: 3323968 gcgtacgtgctgacgctgacgctgccgtcggcggcggcgatgtactgggcgttcggggac 3323909 Query: 392 gagctgctggcgcacgccaacgccttctcgctgctgcc-cagacggcgtggcgggacgcc 450 | |||||||| ||| ||||||||||| |||||||||| | |||| ||||||| |||||| Sbjct: 3323908 gcgctgctggaccactccaacgccttcgcgctgctgccgcggacgccgtggcgcgacgcc 3323849 Query: 451 gc 452 || Sbjct: 3323848 gc 3323847 Score = 135 bits (68), Expect = 1e-28 Identities = 134/156 (85%) Strand = Plus / Minus Query: 1 catcaacgaccggctggacaagcggacgtggacatacatcttcggcgcgtgctgcgcgac 60 |||||||||||| || ||||||||||| ||||| ||||||||||| || |||||||| || Sbjct: 3324305 catcaacgaccgcctcgacaagcggacatggacctacatcttcggggcttgctgcgccac 3324246 Query: 61 gacggtgttcatcccgtcgttccacaactaccggatctggtccttcctggggctgggcat 120 ||||||||| ||||||| |||||||||||||| ||||||||||||| || || ||| Sbjct: 3324245 cacggtgttcgtcccgtccttccacaactaccgcgtctggtccttcctcggcctcctcat 3324186 Query: 121 gaccacctacaccgcctggtacctcgccatcgccgc 156 ||| |||||||||| ||||||||| || ||||||| Sbjct: 3324185 gacgtcctacaccgcgtggtacctcaccgtcgccgc 3324150
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 210 bits (106), Expect = 3e-51 Identities = 209/242 (86%), Gaps = 1/242 (0%) Strand = Plus / Minus Query: 212 ctctacttcaccggcgccaccaacatcctctacaccttcggcggccacgccgtcacagtg 271 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| || ||| Sbjct: 3332793 ctctacttcaccggcgccaccaacatcctctacacgttcggcggccacgccgtgacggtg 3332734 Query: 272 gagatcatgcacgcgatgtggaagccggccaagttcaagtacatctacctgctggcgacg 331 |||||||||||||| ||||||| |||| ||||||| |||||||| |||||| Sbjct: 3332733 gagatcatgcacgccatgtggaggccgcggcggttcaagatgatctacctcgccgcgacg 3332674 Query: 332 ctgtacgtgttcacgctgacgctgccgtcggcgtcggccatgtactgggcgtacggggac 391 ||||||| | ||||||||||||||||||||| |||| ||||||||||||| ||||||| Sbjct: 3332673 gcgtacgtgctgacgctgacgctgccgtcggcggcggcgatgtactgggcgttcggggac 3332614 Query: 392 gagctgctggcgcacgccaacgccttctcgctgctgcc-cagacggcgtggcgggacgcc 450 | |||||||| ||| ||||||||||| |||||||||| | |||| ||||||| |||||| Sbjct: 3332613 gcgctgctggaccactccaacgccttcgcgctgctgccgcggacgccgtggcgcgacgcc 3332554 Query: 451 gc 452 || Sbjct: 3332553 gc 3332552 Score = 135 bits (68), Expect = 1e-28 Identities = 134/156 (85%) Strand = Plus / Minus Query: 1 catcaacgaccggctggacaagcggacgtggacatacatcttcggcgcgtgctgcgcgac 60 |||||||||||| || ||||||||||| ||||| ||||||||||| || |||||||| || Sbjct: 3333010 catcaacgaccgcctcgacaagcggacatggacctacatcttcggggcttgctgcgccac 3332951 Query: 61 gacggtgttcatcccgtcgttccacaactaccggatctggtccttcctggggctgggcat 120 ||||||||| ||||||| |||||||||||||| ||||||||||||| || || ||| Sbjct: 3332950 cacggtgttcgtcccgtccttccacaactaccgcgtctggtccttcctcggcctcctcat 3332891 Query: 121 gaccacctacaccgcctggtacctcgccatcgccgc 156 ||| |||||||||| ||||||||| || ||||||| Sbjct: 3332890 gacgtcctacaccgcgtggtacctcaccgtcgccgc 3332855
>gb|AY109836.1| Zea mays CL468_-5 mRNA sequence Length = 884 Score = 208 bits (105), Expect = 1e-50 Identities = 141/153 (92%) Strand = Plus / Plus Query: 1 catcaacgaccggctggacaagcggacgtggacatacatcttcggcgcgtgctgcgcgac 60 |||||||||| ||||||||||||||||||||| |||||||||||||| |||||||| || Sbjct: 595 catcaacgacaagctggacaagcggacgtggacgtacatcttcggcgcctgctgcgccac 654 Query: 61 gacggtgttcatcccgtcgttccacaactaccggatctggtccttcctggggctgggcat 120 |||||||||||||||||||||||||||||||||||||||||| |||||||| || | ||| Sbjct: 655 gacggtgttcatcccgtcgttccacaactaccggatctggtcgttcctgggcctcgtcat 714 Query: 121 gaccacctacaccgcctggtacctcgccatcgc 153 |||||||||||| || |||||||||||| |||| Sbjct: 715 gaccacctacacggcgtggtacctcgccgtcgc 747 Score = 85.7 bits (43), Expect = 1e-13 Identities = 70/79 (88%) Strand = Plus / Plus Query: 212 ctctacttcaccggcgccaccaacatcctctacaccttcggcggccacgccgtcacagtg 271 |||||||||||||| ||||| ||||| |||||||| ||||| || ||||| || || ||| Sbjct: 806 ctctacttcaccggggccacaaacattctctacactttcggagggcacgctgttaccgtg 865 Query: 272 gagatcatgcacgcgatgt 290 ||||||||||||||||||| Sbjct: 866 gagatcatgcacgcgatgt 884
>emb|AJ011794.1|ZMA011794 Zea mays mRNA for AUX1 protein Length = 2108 Score = 194 bits (98), Expect = 2e-46 Identities = 161/182 (88%) Strand = Plus / Plus Query: 3 tcaacgaccggctggacaagcggacgtggacatacatcttcggcgcgtgctgcgcgacga 62 ||||||||||||||||||||||||||||||| ||| |||||||||| |||||||| || | Sbjct: 568 tcaacgaccggctggacaagcggacgtggacctacgtcttcggcgcctgctgcgccacca 627 Query: 63 cggtgttcatcccgtcgttccacaactaccggatctggtccttcctggggctgggcatga 122 | || |||||||| || |||||||||||||| |||||||||||||||| || | ||||| Sbjct: 628 ccgtcttcatcccctccttccacaactaccgcgtctggtccttcctgggcctcgtcatga 687 Query: 123 ccacctacaccgcctggtacctcgccatcgccgcgctcatcaacggccaggtcgagggcg 182 |||||||||||||||||||| | ||| ||||| ||||| || |||| ||||||||||||| Sbjct: 688 ccacctacaccgcctggtacatggccgtcgcctcgctcgtccacggacaggtcgagggcg 747 Query: 183 tc 184 || Sbjct: 748 tc 749 Score = 151 bits (76), Expect = 2e-33 Identities = 175/208 (84%) Strand = Plus / Plus Query: 207 tcgtcctctacttcaccggcgccaccaacatcctctacaccttcggcggccacgccgtca 266 |||| |||||||||||||| || |||||||| |||||||| ||||| || ||||| |||| Sbjct: 772 tcgtactctacttcaccggggcgaccaacatactctacacgttcgggggacacgcggtca 831 Query: 267 cagtggagatcatgcacgcgatgtggaagccggccaagttcaagtacatctacctgctgg 326 |||||||||||||||||||||||||| || ||||||||| |||||||||||||| Sbjct: 832 cagtggagatcatgcacgcgatgtggcgtcctcagaagttcaaggccatctacctgctgg 891 Query: 327 cgacgctgtacgtgttcacgctgacgctgccgtcggcgtcggccatgtactgggcgtacg 386 |||||||||||||| | |||||||| || || || || | ||| |||||||||| || Sbjct: 892 cgacgctgtacgtgctgacgctgaccctcccttccgccgccgcctcctactgggcgttcg 951 Query: 387 gggacgagctgctggcgcacgccaacgc 414 | |||||||||||| ||||| ||||||| Sbjct: 952 gcgacgagctgctgacgcactccaacgc 979
>gb|AY109689.1| Zea mays CL468_2 mRNA sequence Length = 2108 Score = 194 bits (98), Expect = 2e-46 Identities = 161/182 (88%) Strand = Plus / Plus Query: 3 tcaacgaccggctggacaagcggacgtggacatacatcttcggcgcgtgctgcgcgacga 62 ||||||||||||||||||||||||||||||| ||| |||||||||| |||||||| || | Sbjct: 568 tcaacgaccggctggacaagcggacgtggacctacgtcttcggcgcctgctgcgccacca 627 Query: 63 cggtgttcatcccgtcgttccacaactaccggatctggtccttcctggggctgggcatga 122 | || |||||||| || |||||||||||||| |||||||||||||||| || | ||||| Sbjct: 628 ccgtcttcatcccctccttccacaactaccgcgtctggtccttcctgggcctcgtcatga 687 Query: 123 ccacctacaccgcctggtacctcgccatcgccgcgctcatcaacggccaggtcgagggcg 182 |||||||||||||||||||| | ||| ||||| ||||| || |||| ||||||||||||| Sbjct: 688 ccacctacaccgcctggtacatggccgtcgcctcgctcgtccacggacaggtcgagggcg 747 Query: 183 tc 184 || Sbjct: 748 tc 749 Score = 111 bits (56), Expect = 2e-21 Identities = 120/143 (83%) Strand = Plus / Plus Query: 207 tcgtcctctacttcaccggcgccaccaacatcctctacaccttcggcggccacgccgtca 266 |||| |||||||||||||| || |||||||| |||||||| ||| ||||| |||| Sbjct: 772 tcgtactctacttcaccggggcgaccaacatactctacacgttcnnnnnacacgcggtca 831 Query: 267 cagtggagatcatgcacgcgatgtggaagccggccaagttcaagtacatctacctgctgg 326 |||||||||||||||||||||||||| || ||||||||| |||||||||||||| Sbjct: 832 cagtggagatcatgcacgcgatgtggcgtcctcagaagttcaaggccatctacctgctgg 891 Query: 327 cgacgctgtacgtgttcacgctg 349 |||||||||||||| | |||||| Sbjct: 892 cgacgctgtacgtgctgacgctg 914 Score = 46.1 bits (23), Expect = 0.100 Identities = 35/39 (89%) Strand = Plus / Plus Query: 376 ctgggcgtacggggacgagctgctggcgcacgccaacgc 414 |||||||| ||| |||||||||||| ||||| ||||||| Sbjct: 941 ctgggcgttcggcgacgagctgctgacgcactccaacgc 979
>gb|AF522029.1| Momordica charantia auxin influx carrier-like protein 2 (AIC2) mRNA, complete cds Length = 2787 Score = 182 bits (92), Expect = 7e-43 Identities = 299/368 (81%) Strand = Plus / Plus Query: 29 tggacatacatcttcggcgcgtgctgcgcgacgacggtgttcatcccgtcgttccacaac 88 ||||||||||| ||||| || || ||||| || || || ||||| || || ||||||||| Sbjct: 1163 tggacatacattttcggagcatgttgcgccaccaccgttttcattccctctttccacaac 1222 Query: 89 taccggatctggtccttcctggggctgggcatgaccacctacaccgcctggtacctcgcc 148 || ||||| ||||| || || || || ||||||||||| ||||||||||||||| | ||| Sbjct: 1223 tatcggatttggtcatttctcggcctcggcatgaccacttacaccgcctggtacatggcc 1282 Query: 149 atcgccgcgctcatcaacggccaggtcgagggcgtcacccacaccggaccaaacaagctc 208 ||||||| || ||| |||||||||| || ||||| ||||| | || || | ||||| Sbjct: 1283 gtcgccgcccttatccacggccaggtggaaggcgttacccattcggggccgacaaagctg 1342 Query: 209 gtcctctacttcaccggcgccaccaacatcctctacaccttcggcggccacgccgtcaca 268 || ||||||||||| ||||||||||| || || ||||||||||||||||| || ||||| Sbjct: 1343 gtgctctacttcactggcgccaccaatattctttacaccttcggcggccatgctgtcact 1402 Query: 269 gtggagatcatgcacgcgatgtggaagccggccaagttcaagtacatctacctgctggcg 328 ||||| || |||||||| ||||||||||| |||||||||| ||| ||| || |||| Sbjct: 1403 gtggaaataatgcacgctatgtggaagcctcagaagttcaagtccatttacttgatggcc 1462 Query: 329 acgctgtacgtgttcacgctgacgctgccgtcggcgtcggccatgtactgggcgtacggg 388 ||||||||||| ||||| | ||||| ||||| || || ||| | |||||||| | ||| Sbjct: 1463 acgctgtacgttttcactttaacgcttccgtcagcttccgccgtctactgggccttcggc 1522 Query: 389 gacgagct 396 |||||||| Sbjct: 1523 gacgagct 1530 Score = 117 bits (59), Expect = 3e-23 Identities = 200/247 (80%) Strand = Plus / Plus Query: 150 tcgccgcgctcatcaacggccaggtcgagggcgtcacccacaccggaccaaacaagctcg 209 ||||||| || ||| |||||||||| || ||||| ||||| | || || | ||||| | Sbjct: 1671 tcgccgcccttatccacggccaggtggaaggcgttacccattcggggccgacaaagctgg 1730 Query: 210 tcctctacttcaccggcgccaccaacatcctctacaccttcggcggccacgccgtcacag 269 | ||||||||||| ||||||||||| || || ||||||||||||||||| || ||||| | Sbjct: 1731 tgctctacttcactggcgccaccaatattctttacaccttcggcggccatgctgtcactg 1790 Query: 270 tggagatcatgcacgcgatgtggaagccggccaagttcaagtacatctacctgctggcga 329 |||| || |||||||| ||||||||||| |||||||||| ||| ||| || |||| | Sbjct: 1791 tggaaataatgcacgctatgtggaagcctcagaagttcaagtccatttacttgatggcca 1850 Query: 330 cgctgtacgtgttcacgctgacgctgccgtcggcgtcggccatgtactgggcgtacgggg 389 |||||||||| ||||| | ||||| ||||| || || ||| | |||||||| | ||| | Sbjct: 1851 cgctgtacgttttcactttaacgcttccgtcagcttccgccgtctactgggccttcggcg 1910 Query: 390 acgagct 396 ||||||| Sbjct: 1911 acgagct 1917
>gb|AC091665.3| Oryza sativa chromosome 10 clone OSJNBb0016M10, complete sequence Length = 118101 Score = 163 bits (82), Expect = 6e-37 Identities = 151/174 (86%) Strand = Plus / Minus Query: 1 catcaacgaccggctggacaagcggacgtggacatacatcttcggcgcgtgctgcgcgac 60 ||||||||||| |||||||||||||| ||||| |||||||||||||| |||||||| || Sbjct: 14985 catcaacgaccatctggacaagcggacatggacgtacatcttcggcgcctgctgcgccac 14926 Query: 61 gacggtgttcatcccgtcgttccacaactaccggatctggtccttcctggggctgggcat 120 || || ||||||||||| |||||||||||||| || ||||||||||| || || ||| Sbjct: 14925 caccgtcttcatcccgtcattccacaactaccgcatttggtccttcctcggcctcctcat 14866 Query: 121 gaccacctacaccgcctggtacctcgccatcgccgcgctcatcaacggccaggt 174 |||||||||||||||||||||| ||||| ||||| | |||||| |||| ||||| Sbjct: 14865 gaccacctacaccgcctggtacatcgccgtcgcctccctcatccacggacaggt 14812 Score = 133 bits (67), Expect = 6e-28 Identities = 155/183 (84%), Gaps = 1/183 (0%) Strand = Plus / Minus Query: 271 ggagatcatgcacgcgatgtggaagccggccaagttcaagtacatctacctgctggcgac 330 |||||| ||||||||||||||| |||| ||||||||| ||||||||||||||||| Sbjct: 12661 ggagataatgcacgcgatgtggcggccgcagaagttcaaggcgatctacctgctggcgac 12602 Query: 331 gctgtacgtgttcacgctgacgctgccgtcggcgtcggccatgtactgggcgtacgggga 390 | |||||||| | |||||||||||||||||||||||||| ||||||||||| |||||| Sbjct: 12601 ggtgtacgtgctgacgctgacgctgccgtcggcgtcggcggcgtactgggcgttcgggga 12542 Query: 391 cgagctgctggcgcacgccaacgccttctcgctgctgcc-cagacggcgtggcgggacgc 449 || ||||||| ||||| | ||||| | |||||||||| | |||| ||||||| ||||| Sbjct: 12541 cgcgctgctgacgcactcgaacgcgctggcgctgctgccgcggacgccgtggcgcgacgc 12482 Query: 450 cgc 452 ||| Sbjct: 12481 cgc 12479 Score = 81.8 bits (41), Expect = 2e-12 Identities = 56/61 (91%) Strand = Plus / Minus Query: 207 tcgtcctctacttcaccggcgccaccaacatcctctacaccttcggcggccacgccgtca 266 |||| ||||||||||| || |||||||||||||||||||||||||| |||||||| |||| Sbjct: 14485 tcgtgctctacttcacgggggccaccaacatcctctacaccttcgggggccacgctgtca 14426 Query: 267 c 267 | Sbjct: 14425 c 14425
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 163 bits (82), Expect = 6e-37 Identities = 151/174 (86%) Strand = Plus / Minus Query: 1 catcaacgaccggctggacaagcggacgtggacatacatcttcggcgcgtgctgcgcgac 60 ||||||||||| |||||||||||||| ||||| |||||||||||||| |||||||| || Sbjct: 2833953 catcaacgaccatctggacaagcggacatggacgtacatcttcggcgcctgctgcgccac 2833894 Query: 61 gacggtgttcatcccgtcgttccacaactaccggatctggtccttcctggggctgggcat 120 || || ||||||||||| |||||||||||||| || ||||||||||| || || ||| Sbjct: 2833893 caccgtcttcatcccgtcattccacaactaccgcatttggtccttcctcggcctcctcat 2833834 Query: 121 gaccacctacaccgcctggtacctcgccatcgccgcgctcatcaacggccaggt 174 |||||||||||||||||||||| ||||| ||||| | |||||| |||| ||||| Sbjct: 2833833 gaccacctacaccgcctggtacatcgccgtcgcctccctcatccacggacaggt 2833780 Score = 133 bits (67), Expect = 6e-28 Identities = 155/183 (84%), Gaps = 1/183 (0%) Strand = Plus / Minus Query: 271 ggagatcatgcacgcgatgtggaagccggccaagttcaagtacatctacctgctggcgac 330 |||||| ||||||||||||||| |||| ||||||||| ||||||||||||||||| Sbjct: 2831629 ggagataatgcacgcgatgtggcggccgcagaagttcaaggcgatctacctgctggcgac 2831570 Query: 331 gctgtacgtgttcacgctgacgctgccgtcggcgtcggccatgtactgggcgtacgggga 390 | |||||||| | |||||||||||||||||||||||||| ||||||||||| |||||| Sbjct: 2831569 ggtgtacgtgctgacgctgacgctgccgtcggcgtcggcggcgtactgggcgttcgggga 2831510 Query: 391 cgagctgctggcgcacgccaacgccttctcgctgctgcc-cagacggcgtggcgggacgc 449 || ||||||| ||||| | ||||| | |||||||||| | |||| ||||||| ||||| Sbjct: 2831509 cgcgctgctgacgcactcgaacgcgctggcgctgctgccgcggacgccgtggcgcgacgc 2831450 Query: 450 cgc 452 ||| Sbjct: 2831449 cgc 2831447 Score = 81.8 bits (41), Expect = 2e-12 Identities = 56/61 (91%) Strand = Plus / Minus Query: 207 tcgtcctctacttcaccggcgccaccaacatcctctacaccttcggcggccacgccgtca 266 |||| ||||||||||| || |||||||||||||||||||||||||| |||||||| |||| Sbjct: 2833453 tcgtgctctacttcacgggggccaccaacatcctctacaccttcgggggccacgctgtca 2833394 Query: 267 c 267 | Sbjct: 2833393 c 2833393
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 163 bits (82), Expect = 6e-37 Identities = 151/174 (86%) Strand = Plus / Minus Query: 1 catcaacgaccggctggacaagcggacgtggacatacatcttcggcgcgtgctgcgcgac 60 ||||||||||| |||||||||||||| ||||| |||||||||||||| |||||||| || Sbjct: 2833904 catcaacgaccatctggacaagcggacatggacgtacatcttcggcgcctgctgcgccac 2833845 Query: 61 gacggtgttcatcccgtcgttccacaactaccggatctggtccttcctggggctgggcat 120 || || ||||||||||| |||||||||||||| || ||||||||||| || || ||| Sbjct: 2833844 caccgtcttcatcccgtcattccacaactaccgcatttggtccttcctcggcctcctcat 2833785 Query: 121 gaccacctacaccgcctggtacctcgccatcgccgcgctcatcaacggccaggt 174 |||||||||||||||||||||| ||||| ||||| | |||||| |||| ||||| Sbjct: 2833784 gaccacctacaccgcctggtacatcgccgtcgcctccctcatccacggacaggt 2833731 Score = 133 bits (67), Expect = 6e-28 Identities = 155/183 (84%), Gaps = 1/183 (0%) Strand = Plus / Minus Query: 271 ggagatcatgcacgcgatgtggaagccggccaagttcaagtacatctacctgctggcgac 330 |||||| ||||||||||||||| |||| ||||||||| ||||||||||||||||| Sbjct: 2831580 ggagataatgcacgcgatgtggcggccgcagaagttcaaggcgatctacctgctggcgac 2831521 Query: 331 gctgtacgtgttcacgctgacgctgccgtcggcgtcggccatgtactgggcgtacgggga 390 | |||||||| | |||||||||||||||||||||||||| ||||||||||| |||||| Sbjct: 2831520 ggtgtacgtgctgacgctgacgctgccgtcggcgtcggcggcgtactgggcgttcgggga 2831461 Query: 391 cgagctgctggcgcacgccaacgccttctcgctgctgcc-cagacggcgtggcgggacgc 449 || ||||||| ||||| | ||||| | |||||||||| | |||| ||||||| ||||| Sbjct: 2831460 cgcgctgctgacgcactcgaacgcgctggcgctgctgccgcggacgccgtggcgcgacgc 2831401 Query: 450 cgc 452 ||| Sbjct: 2831400 cgc 2831398 Score = 81.8 bits (41), Expect = 2e-12 Identities = 56/61 (91%) Strand = Plus / Minus Query: 207 tcgtcctctacttcaccggcgccaccaacatcctctacaccttcggcggccacgccgtca 266 |||| ||||||||||| || |||||||||||||||||||||||||| |||||||| |||| Sbjct: 2833404 tcgtgctctacttcacgggggccaccaacatcctctacaccttcgggggccacgctgtca 2833345 Query: 267 c 267 | Sbjct: 2833344 c 2833344
>dbj|AK101329.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033034G17, full insert sequence Length = 1153 Score = 137 bits (69), Expect = 4e-29 Identities = 114/129 (88%) Strand = Plus / Plus Query: 271 ggagatcatgcacgcgatgtggaagccggccaagttcaagtacatctacctgctggcgac 330 ||||||||||||||||||||||| |||| ||||||||| ||||||||| ||||||| Sbjct: 95 ggagatcatgcacgcgatgtggaggccgcagaagttcaaggcgatctacctgatggcgac 154 Query: 331 gctgtacgtgttcacgctgacgctgccgtcggcgtcggccatgtactgggcgtacgggga 390 |||||||||| | ||||||||||||||||||||| || | |||||||||||| |||||| Sbjct: 155 gctgtacgtgctgacgctgacgctgccgtcggcggcgagcgtgtactgggcgttcgggga 214 Query: 391 cgagctgct 399 ||||||||| Sbjct: 215 cgagctgct 223
>ref|NM_106418.3| Arabidopsis thaliana amino acid permease/ transporter AT1G77690 mRNA, complete cds Length = 1727 Score = 111 bits (56), Expect = 2e-21 Identities = 74/80 (92%) Strand = Plus / Plus Query: 215 tacttcaccggcgccaccaacatcctctacaccttcggcggccacgccgtcacagtggag 274 ||||||||||| ||||||||||| ||||||||||| || ||||||||||||||||||||| Sbjct: 720 tacttcaccggagccaccaacattctctacacctttggtggccacgccgtcacagtggag 779 Query: 275 atcatgcacgcgatgtggaa 294 || |||||||| |||||||| Sbjct: 780 ataatgcacgctatgtggaa 799 Score = 40.1 bits (20), Expect = 6.1 Identities = 35/40 (87%) Strand = Plus / Plus Query: 15 tggacaagcggacgtggacatacatcttcggcgcgtgctg 54 |||||||| |||| ||||||||||| || || |||||||| Sbjct: 520 tggacaagaggacatggacatacatatttggggcgtgctg 559
>gb|BT008300.1| Arabidopsis thaliana At1g77690/T32E8_2 gene, complete cds Length = 1413 Score = 111 bits (56), Expect = 2e-21 Identities = 74/80 (92%) Strand = Plus / Plus Query: 215 tacttcaccggcgccaccaacatcctctacaccttcggcggccacgccgtcacagtggag 274 ||||||||||| ||||||||||| ||||||||||| || ||||||||||||||||||||| Sbjct: 697 tacttcaccggagccaccaacattctctacacctttggtggccacgccgtcacagtggag 756 Query: 275 atcatgcacgcgatgtggaa 294 || |||||||| |||||||| Sbjct: 757 ataatgcacgctatgtggaa 776 Score = 40.1 bits (20), Expect = 6.1 Identities = 35/40 (87%) Strand = Plus / Plus Query: 15 tggacaagcggacgtggacatacatcttcggcgcgtgctg 54 |||||||| |||| ||||||||||| || || |||||||| Sbjct: 497 tggacaagaggacatggacatacatatttggggcgtgctg 536
>gb|AY054266.1| Arabidopsis thaliana At1g77690/T32E8_2 mRNA, complete cds Length = 1649 Score = 111 bits (56), Expect = 2e-21 Identities = 74/80 (92%) Strand = Plus / Plus Query: 215 tacttcaccggcgccaccaacatcctctacaccttcggcggccacgccgtcacagtggag 274 ||||||||||| ||||||||||| ||||||||||| || ||||||||||||||||||||| Sbjct: 720 tacttcaccggagccaccaacattctctacacctttggtggccacgccgtcacagtggag 779 Query: 275 atcatgcacgcgatgtggaa 294 || |||||||| |||||||| Sbjct: 780 ataatgcacgctatgtggaa 799 Score = 40.1 bits (20), Expect = 6.1 Identities = 35/40 (87%) Strand = Plus / Plus Query: 15 tggacaagcggacgtggacatacatcttcggcgcgtgctg 54 |||||||| |||| ||||||||||| || || |||||||| Sbjct: 520 tggacaagaggacatggacatacatatttggggcgtgctg 559
>ref|NM_202990.1| Arabidopsis thaliana unknown protein AT5G01240 transcript variant AT5G01240.2 mRNA, complete cds Length = 1695 Score = 107 bits (54), Expect = 3e-20 Identities = 222/278 (79%) Strand = Plus / Plus Query: 17 gacaagcggacgtggacatacatcttcggcgcgtgctgcgcgacgacggtgttcatcccg 76 |||||| |||| ||||| || || || || || ||||| || ||||| || ||||| || Sbjct: 413 gacaagaggacatggacttatatatttggggcttgctgtgccacgaccgttttcatacca 472 Query: 77 tcgttccacaactaccggatctggtccttcctggggctgggcatgaccacctacaccgcc 136 || |||||||| ||||| || ||||| ||||| || || |||||||||||||||||||| Sbjct: 473 tctttccacaattaccgtatttggtctttcctcggccttggcatgaccacctacaccgct 532 Query: 137 tggtacctcgccatcgccgcgctcatcaacggccaggtcgagggcgtcacccacaccgga 196 ||||||||| |||||||| | | || | || |||| ||||| || || || |||| Sbjct: 533 tggtacctcaccatcgcctcttttctccatggtcaggcggagggtgtgacacattccggt 592 Query: 197 ccaaacaagctcgtcctctacttcaccggcgccaccaacatcctctacaccttcggcggc 256 |||| |||||| || | ||||| ||||| ||||||||||||||||| |||||||| || Sbjct: 593 ccaaccaagcttgtgttgtactttaccggagccaccaacatcctctataccttcggtgga 652 Query: 257 cacgccgtcacagtggagatcatgcacgcgatgtggaa 294 ||||| || || ||||| || ||||| ||||||||||| Sbjct: 653 cacgctgtgaccgtggaaataatgcatgcgatgtggaa 690
>ref|NM_120202.3| Arabidopsis thaliana transporter AT5G01240 transcript variant AT5G01240.1 mRNA, complete cds Length = 2001 Score = 107 bits (54), Expect = 3e-20 Identities = 222/278 (79%) Strand = Plus / Plus Query: 17 gacaagcggacgtggacatacatcttcggcgcgtgctgcgcgacgacggtgttcatcccg 76 |||||| |||| ||||| || || || || || ||||| || ||||| || ||||| || Sbjct: 719 gacaagaggacatggacttatatatttggggcttgctgtgccacgaccgttttcatacca 778 Query: 77 tcgttccacaactaccggatctggtccttcctggggctgggcatgaccacctacaccgcc 136 || |||||||| ||||| || ||||| ||||| || || |||||||||||||||||||| Sbjct: 779 tctttccacaattaccgtatttggtctttcctcggccttggcatgaccacctacaccgct 838 Query: 137 tggtacctcgccatcgccgcgctcatcaacggccaggtcgagggcgtcacccacaccgga 196 ||||||||| |||||||| | | || | || |||| ||||| || || || |||| Sbjct: 839 tggtacctcaccatcgcctcttttctccatggtcaggcggagggtgtgacacattccggt 898 Query: 197 ccaaacaagctcgtcctctacttcaccggcgccaccaacatcctctacaccttcggcggc 256 |||| |||||| || | ||||| ||||| ||||||||||||||||| |||||||| || Sbjct: 899 ccaaccaagcttgtgttgtactttaccggagccaccaacatcctctataccttcggtgga 958 Query: 257 cacgccgtcacagtggagatcatgcacgcgatgtggaa 294 ||||| || || ||||| || ||||| ||||||||||| Sbjct: 959 cacgctgtgaccgtggaaataatgcatgcgatgtggaa 996
>emb|BX830786.1|CNS09ZGE Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS22ZH06 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1457 Score = 107 bits (54), Expect = 3e-20 Identities = 222/278 (79%) Strand = Plus / Plus Query: 17 gacaagcggacgtggacatacatcttcggcgcgtgctgcgcgacgacggtgttcatcccg 76 |||||| |||| ||||| || || || || || ||||| || ||||| || ||||| || Sbjct: 413 gacaagaggacatggacttatatatttggggcttgctgtgccacgaccgttttcatacca 472 Query: 77 tcgttccacaactaccggatctggtccttcctggggctgggcatgaccacctacaccgcc 136 || |||||||| ||||| || ||||| ||||| || || |||||||||||||||||||| Sbjct: 473 tctttccacaattaccgtatttggtctttcctcggccttggcatgaccacctacaccgct 532 Query: 137 tggtacctcgccatcgccgcgctcatcaacggccaggtcgagggcgtcacccacaccgga 196 ||||||||| |||||||| | | || | || |||| ||||| || || || |||| Sbjct: 533 tggtacctcaccatcgcctcttttctccatggtcaggcggagggtgtgacacattccggt 592 Query: 197 ccaaacaagctcgtcctctacttcaccggcgccaccaacatcctctacaccttcggcggc 256 |||| |||||| || | ||||| ||||| ||||||||||||||||| |||||||| || Sbjct: 593 ccaaccaagcttgtgttgtactttaccggagccaccaacatcctctataccttcggtgga 652 Query: 257 cacgccgtcacagtggagatcatgcacgcgatgtggaa 294 ||||| || || ||||| || ||||| ||||||||||| Sbjct: 653 cacgctgtgaccgtggaaataatgcatgcgatgtggaa 690
>emb|AJ249442.1|ATH249442 Arabidopsis thaliana mRNA for putative AUX1-like permease (LAX1 gene) Length = 1644 Score = 107 bits (54), Expect = 3e-20 Identities = 222/278 (79%) Strand = Plus / Plus Query: 17 gacaagcggacgtggacatacatcttcggcgcgtgctgcgcgacgacggtgttcatcccg 76 |||||| |||| ||||| || || || || || ||||| || ||||| || ||||| || Sbjct: 571 gacaagaggacatggacttatatatttggggcttgctgtgccacgaccgttttcatacca 630 Query: 77 tcgttccacaactaccggatctggtccttcctggggctgggcatgaccacctacaccgcc 136 || |||||||| ||||| || ||||| ||||| || || |||||||||||||||||||| Sbjct: 631 tctttccacaattaccgtatttggtctttcctcggccttggcatgaccacctacaccgct 690 Query: 137 tggtacctcgccatcgccgcgctcatcaacggccaggtcgagggcgtcacccacaccgga 196 ||||||||| |||||||| | | || | || |||| ||||| || || || |||| Sbjct: 691 tggtacctcaccatcgcctcttttctccatggtcaggcggagggtgtgacacattccggt 750 Query: 197 ccaaacaagctcgtcctctacttcaccggcgccaccaacatcctctacaccttcggcggc 256 |||| |||||| || | ||||| ||||| ||||||||||||||||| |||||||| || Sbjct: 751 ccaaccaagcttgtgttgtactttaccggagccaccaacatcctctataccttcggtgga 810 Query: 257 cacgccgtcacagtggagatcatgcacgcgatgtggaa 294 ||||| || || ||||| || ||||| ||||||||||| Sbjct: 811 cacgctgtgaccgtggaaataatgcatgcgatgtggaa 848
>emb|BX813477.1|CNS0ADGZ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB19ZG11 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1707 Score = 95.6 bits (48), Expect = 1e-16 Identities = 63/68 (92%) Strand = Plus / Plus Query: 215 tacttcaccggcgccaccaacatcctctacaccttcggcggccacgccgtcacagtggag 274 ||||||||||| ||||||||||| ||||||||||| || ||||||||||||||||||||| Sbjct: 708 tacttcaccggagccaccaacattctctacacctttggtggccacgccgtcacagtggag 767 Query: 275 atcatgca 282 || ||||| Sbjct: 768 ataatgca 775 Score = 40.1 bits (20), Expect = 6.1 Identities = 35/40 (87%) Strand = Plus / Plus Query: 15 tggacaagcggacgtggacatacatcttcggcgcgtgctg 54 |||||||| |||| ||||||||||| || || |||||||| Sbjct: 510 tggacaagaggacatggacatacatatttggggcgtgctg 549
>emb|BX831209.1|CNS09ZCQ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS69ZA08 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1745 Score = 93.7 bits (47), Expect = 5e-16 Identities = 222/279 (79%), Gaps = 1/279 (0%) Strand = Plus / Plus Query: 17 gacaagcggacgtggacatacatcttcggcgcgtgctgcgcgacgacggtgttcatcccg 76 |||||| |||| ||||| || || || || || ||||| || ||||| || ||||| || Sbjct: 719 gacaagaggacatggacttatatatttggggcttgctgtgccacgaccgttttcatacca 778 Query: 77 tcgttccacaactaccggatctggtccttcctggggctgggcatgaccacctacaccgcc 136 || |||||||| ||||| || ||||| ||||| || || |||||||||||||||||||| Sbjct: 779 tctttccacaattaccgtatttggtctttcctcggccttggcatgaccacctacaccgct 838 Query: 137 tggtacctcgccatcgccgcgctcatcaacggccaggtcgagggcgtcacccacaccgga 196 ||||||||| |||||||| | | || | || |||| ||||| || || || |||| Sbjct: 839 tggtacctcaccatcgcctctttactccatggtcaggcggagggtgtgacacattccggt 898 Query: 197 ccaaacaagctcgtcctctacttcaccggcgccaccaacatcctct-acaccttcggcgg 255 |||| |||||| || | ||||| ||||| |||||||||||||||| | |||||||| || Sbjct: 899 ccaaccaagcttgtgttgtactttaccggagccaccaacatcctctaataccttcggtgg 958 Query: 256 ccacgccgtcacagtggagatcatgcacgcgatgtggaa 294 ||||| || || ||||| || ||||| ||||||||||| Sbjct: 959 acacgctgtgaccgtggaaataatgcatgcgatgtggaa 997
>gb|AF115543.1| Populus tremula x Populus tremuloides AUX1-like protein (LAX1) mRNA, complete cds Length = 1811 Score = 85.7 bits (43), Expect = 1e-13 Identities = 223/283 (78%) Strand = Plus / Plus Query: 15 tggacaagcggacgtggacatacatcttcggcgcgtgctgcgcgacgacggtgttcatcc 74 |||||||| |||| ||||| ||||| || || || ||||| || || || || ||||| | Sbjct: 569 tggacaagaggacttggacttacatttttggagcttgctgtgccacaacagttttcatac 628 Query: 75 cgtcgttccacaactaccggatctggtccttcctggggctgggcatgaccacctacaccg 134 | || || || |||||||| || ||||| || || || || ||||||||||| || |||| Sbjct: 629 cctcttttcataactaccgtatttggtcttttcttggtctaggcatgaccacatataccg 688 Query: 135 cctggtacctcgccatcgccgcgctcatcaacggccaggtcgagggcgtcacccacaccg 194 |||||||| | ||||| || || || || | |||||||| | |||||||| || | | Sbjct: 689 cctggtacatggccatagcagctcttattcatggccaggtaggaggcgtcacacattctg 748 Query: 195 gaccaaacaagctcgtcctctacttcaccggcgccaccaacatcctctacaccttcggcg 254 || | ||||| || || ||||||||||| ||||||||||||||||||||||| || | Sbjct: 749 ctccgacaaagctggtgctttacttcaccggagccaccaacatcctctacacctttggtg 808 Query: 255 gccacgccgtcacagtggagatcatgcacgcgatgtggaagcc 297 | || || ||||| ||||| |||||||| || ||||||||||| Sbjct: 809 gacatgctgtcaccgtggaaatcatgcatgccatgtggaagcc 851
>gb|AY864733.1| Populus tomentosa auxin influx protein (AUX1) mRNA, complete cds Length = 1760 Score = 85.7 bits (43), Expect = 1e-13 Identities = 73/83 (87%) Strand = Plus / Plus Query: 215 tacttcaccggcgccaccaacatcctctacaccttcggcggccacgccgtcacagtggag 274 ||||||||||| ||||||||||||||||||||||| || || || || | ||| ||||| Sbjct: 761 tacttcaccggagccaccaacatcctctacacctttggtggacatgctgacaccgtggaa 820 Query: 275 atcatgcacgcgatgtggaagcc 297 |||||||| |||||||||||||| Sbjct: 821 atcatgcatgcgatgtggaagcc 843 Score = 42.1 bits (21), Expect = 1.6 Identities = 48/57 (84%) Strand = Plus / Plus Query: 86 aactaccggatctggtccttcctggggctgggcatgaccacctacaccgcctggtac 142 |||||||| || ||||| || || || || ||||||||||| || |||||||||||| Sbjct: 632 aactaccgtatttggtcttttcttggtcttggcatgaccacatataccgcctggtac 688
>emb|AL137189.2|ATF7J8 Arabidopsis thaliana DNA chromosome 5, BAC clone F7J8 (ESSA project) Length = 118507 Score = 83.8 bits (42), Expect = 5e-13 Identities = 114/138 (82%) Strand = Plus / Plus Query: 17 gacaagcggacgtggacatacatcttcggcgcgtgctgcgcgacgacggtgttcatcccg 76 |||||| |||| ||||| || || || || || ||||| || ||||| || ||||| || Sbjct: 94621 gacaagaggacatggacttatatatttggggcttgctgtgccacgaccgttttcatacca 94680 Query: 77 tcgttccacaactaccggatctggtccttcctggggctgggcatgaccacctacaccgcc 136 || |||||||| ||||| || ||||| ||||| || || |||||||||||||||||||| Sbjct: 94681 tctttccacaattaccgtatttggtctttcctcggccttggcatgaccacctacaccgct 94740 Query: 137 tggtacctcgccatcgcc 154 ||||||||| |||||||| Sbjct: 94741 tggtacctcaccatcgcc 94758 Score = 54.0 bits (27), Expect = 4e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 215 tacttcaccggcgccaccaacatcctctacaccttcggcggccacgc 261 ||||| ||||| ||||||||||||||||| |||||||| || ||||| Sbjct: 94900 tactttaccggagccaccaacatcctctataccttcggtggacacgc 94946
>emb|AJ862887.1| Prunus avium mRNA for putative auxin influx carrier protein (lax1 gene) Length = 2004 Score = 83.8 bits (42), Expect = 5e-13 Identities = 87/102 (85%) Strand = Plus / Plus Query: 218 ttcaccggcgccaccaacatcctctacaccttcggcggccacgccgtcacagtggagatc 277 |||||||||||||||||||| || ||||| || || ||||| || ||||||||||| ||| Sbjct: 995 ttcaccggcgccaccaacatactatacacgtttggtggccatgctgtcacagtggaaatc 1054 Query: 278 atgcacgcgatgtggaagccggccaagttcaagtacatctac 319 ||||| || ||||||||||| || ||||||||||||||| Sbjct: 1055 atgcatgccatgtggaagccacagaaattcaagtacatctac 1096 Score = 71.9 bits (36), Expect = 2e-09 Identities = 105/128 (82%) Strand = Plus / Plus Query: 15 tggacaagcggacgtggacatacatcttcggcgcgtgctgcgcgacgacggtgttcatcc 74 |||||||| |||| ||||| ||||||||||| || ||||| || || || || ||||| | Sbjct: 792 tggacaagaggacatggacctacatcttcggagcttgctgtgccactacagttttcatac 851 Query: 75 cgtcgttccacaactaccggatctggtccttcctggggctgggcatgaccacctacaccg 134 | || ||||| ||||| ||||| |||||||| || || || || |||||||| ||||| | Sbjct: 852 cttctttccataactatcggatttggtcctttcttggccttggaatgaccacttacacag 911 Query: 135 cctggtac 142 |||||||| Sbjct: 912 cctggtac 919
>gb|AY127575.1| Arabidopsis thaliana putative AUX1-like permease (LAX3) gene, complete cds Length = 2475 Score = 81.8 bits (41), Expect = 2e-12 Identities = 53/57 (92%) Strand = Plus / Plus Query: 215 tacttcaccggcgccaccaacatcctctacaccttcggcggccacgccgtcacagtg 271 ||||||||||| ||||||||||| ||||||||||| || |||||||||||||||||| Sbjct: 1107 tacttcaccggagccaccaacattctctacacctttggtggccacgccgtcacagtg 1163 Score = 40.1 bits (20), Expect = 6.1 Identities = 35/40 (87%) Strand = Plus / Plus Query: 15 tggacaagcggacgtggacatacatcttcggcgcgtgctg 54 |||||||| |||| ||||||||||| || || |||||||| Sbjct: 807 tggacaagaggacatggacatacatatttggggcgtgctg 846
>emb|BX830652.1|CNS09ZCA Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS10ZB01 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1684 Score = 81.8 bits (41), Expect = 2e-12 Identities = 89/105 (84%) Strand = Plus / Plus Query: 50 tgctgcgcgacgacggtgttcatcccgtcgttccacaactaccggatctggtccttcctg 109 ||||| || ||||| || ||||| || || |||||||| ||||| || ||||| ||||| Sbjct: 696 tgctgtgccacgaccgttttcataccatctttccacaattaccgtatttggtctttcctc 755 Query: 110 gggctgggcatgaccacctacaccgcctggtacctcgccatcgcc 154 || || |||||||||||||||||||| ||||||||| |||||||| Sbjct: 756 ggccttggcatgaccacctacaccgcttggtacctcaccatcgcc 800 Score = 48.1 bits (24), Expect = 0.025 Identities = 66/80 (82%) Strand = Plus / Plus Query: 215 tacttcaccggcgccaccaacatcctctacaccttcggcggccacgccgtcacagtggag 274 ||||| ||||| |||||||||||||||| |||||| || ||||| || || ||||| Sbjct: 864 tactttaccggagccaccaacatcctcttatacttcggtggacacgctgtgaccgtggaa 923 Query: 275 atcatgcacgcgatgtggaa 294 || ||||| ||||||||||| Sbjct: 924 ataatgcatgcgatgtggaa 943
>gb|AC012193.6|AC012193 Arabidopsis thaliana chromosome 1 BAC T32E8 genomic sequence, complete sequence Length = 82454 Score = 81.8 bits (41), Expect = 2e-12 Identities = 53/57 (92%) Strand = Plus / Minus Query: 215 tacttcaccggcgccaccaacatcctctacaccttcggcggccacgccgtcacagtg 271 ||||||||||| ||||||||||| ||||||||||| || |||||||||||||||||| Sbjct: 9610 tacttcaccggagccaccaacattctctacacctttggtggccacgccgtcacagtg 9554 Score = 40.1 bits (20), Expect = 6.1 Identities = 35/40 (87%) Strand = Plus / Minus Query: 15 tggacaagcggacgtggacatacatcttcggcgcgtgctg 54 |||||||| |||| ||||||||||| || || |||||||| Sbjct: 9910 tggacaagaggacatggacatacatatttggggcgtgctg 9871
>dbj|AB085896.1| Cucumis sativus CS-AUX1 mRNA for AUX1-like auxin transport protein, complete cds Length = 2121 Score = 75.8 bits (38), Expect = 1e-10 Identities = 95/114 (83%) Strand = Plus / Plus Query: 29 tggacatacatcttcggcgcgtgctgcgcgacgacggtgttcatcccgtcgttccacaac 88 ||||||||||| ||||| || || ||||| || || || |||||||| || || ||||| Sbjct: 857 tggacatacattttcggagcatgttgcgccaccactgtcttcatcccttcttttcacaat 916 Query: 89 taccggatctggtccttcctggggctgggcatgaccacctacaccgcctggtac 142 |||||||| |||||||| || || || || |||||||| ||||||||||||||| Sbjct: 917 taccggatttggtcctttctcggccttggtatgaccacttacaccgcctggtac 970 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 212 ctctacttcaccggcgccaccaacatcctctacaccttcggcggccacgc 261 ||||||||||| ||||||||||| || || ||||||||||| || ||||| Sbjct: 1040 ctctacttcactggcgccaccaatattctttacaccttcgggggacacgc 1089
>emb|AJ299397.1|MTR299397 Medicago truncatula mRNA for putative AUX1-like permease (lax1 gene) Length = 1676 Score = 73.8 bits (37), Expect = 4e-10 Identities = 67/77 (87%) Strand = Plus / Plus Query: 218 ttcaccggcgccaccaacatcctctacaccttcggcggccacgccgtcacagtggagatc 277 ||||| |||||||| ||||| ||||| || |||||||| ||||| ||||||||||| ||| Sbjct: 725 ttcactggcgccacaaacatactctatactttcggcgggcacgcagtcacagtggaaatc 784 Query: 278 atgcacgcgatgtggaa 294 ||||| || |||||||| Sbjct: 785 atgcatgcaatgtggaa 801
>gb|AY849386.1| Vitis vinifera cultivar Riesling AUX-1-like protein (LAX1) mRNA, partial cds Length = 499 Score = 69.9 bits (35), Expect = 7e-09 Identities = 62/71 (87%) Strand = Plus / Plus Query: 224 ggcgccaccaacatcctctacaccttcggcggccacgccgtcacagtggagatcatgcac 283 |||||||||||||||||||||||||| ||||| || || || || ||||| ||||||||| Sbjct: 403 ggcgccaccaacatcctctacacctttggcggacatgctgttactgtggaaatcatgcac 462 Query: 284 gcgatgtggaa 294 || ||| |||| Sbjct: 463 gccatgcggaa 473 Score = 69.9 bits (35), Expect = 7e-09 Identities = 113/139 (81%) Strand = Plus / Plus Query: 15 tggacaagcggacgtggacatacatcttcggcgcgtgctgcgcgacgacggtgttcatcc 74 |||| ||| |||| ||||| ||||| || || || ||||| || || || |||||||| | Sbjct: 194 tggataagaggacatggacttacatatttggagcttgctgtgctactactgtgttcatac 253 Query: 75 cgtcgttccacaactaccggatctggtccttcctggggctgggcatgaccacctacaccg 134 | || || ||||||||||| || ||||| || ||||| || ||||||||||||||||| | Sbjct: 254 cctcctttcacaactaccgtatttggtcttttctgggtcttggcatgaccacctacacag 313 Query: 135 cctggtacctcgccatcgc 153 | |||||| | |||||||| Sbjct: 314 catggtacttggccatcgc 332
>emb|AM235386.1| Dianthus caryophyllus mRNA for auxin influx carrier (aux1 gene) Length = 1521 Score = 65.9 bits (33), Expect = 1e-07 Identities = 66/77 (85%) Strand = Plus / Plus Query: 15 tggacaagcggacgtggacatacatcttcggcgcgtgctgcgcgacgacggtgttcatcc 74 ||||||||||||| ||||||||||| || || || ||||||||||| || |||||||| | Sbjct: 523 tggacaagcggacatggacatacatatttggagcatgctgcgcgacaacagtgttcatac 582 Query: 75 cgtcgttccacaactac 91 | || ||||| |||||| Sbjct: 583 catccttccataactac 599 Score = 46.1 bits (23), Expect = 0.100 Identities = 77/95 (81%) Strand = Plus / Plus Query: 224 ggcgccaccaacatcctctacaccttcggcggccacgccgtcacagtggagatcatgcac 283 ||||||||||| ||||||||||| || || || || || ||||| ||||| || ||||| Sbjct: 732 ggcgccaccaatatcctctacacttttggaggacatgctgtcactgtggaaataatgcat 791 Query: 284 gcgatgtggaagccggccaagttcaagtacatcta 318 || |||||||| || || |||||||||||||| Sbjct: 792 gccatgtggaaaccaaggaaattcaagtacatcta 826
>gb|AF522030.1| Momordica charantia auxin influx carrier-like protein 3 (AIC3) mRNA, complete cds Length = 2025 Score = 63.9 bits (32), Expect = 4e-07 Identities = 68/80 (85%) Strand = Plus / Plus Query: 218 ttcaccggcgccaccaacatcctctacaccttcggcggccacgccgtcacagtggagatc 277 ||||| ||||||||||| || || ||||| || || ||||| |||||||| ||||| ||| Sbjct: 1138 ttcactggcgccaccaatattctttacacatttggaggccatgccgtcactgtggaaatc 1197 Query: 278 atgcacgcgatgtggaagcc 297 ||||| || ||||||||||| Sbjct: 1198 atgcatgccatgtggaagcc 1217 Score = 44.1 bits (22), Expect = 0.39 Identities = 61/74 (82%) Strand = Plus / Plus Query: 68 ttcatcccgtcgttccacaactaccggatctggtccttcctggggctgggcatgaccacc 127 |||||||| || || ||||||||| | || ||||| || || || || || ||||||||| Sbjct: 988 ttcatcccttcttttcacaactacagaatttggtcatttcttggcctcggaatgaccacc 1047 Query: 128 tacaccgcctggta 141 ||||| |||||||| Sbjct: 1048 tacactgcctggta 1061
>gb|AF522028.1| Momordica charantia auxin influx carrier-like protein 1 (AIC1) mRNA, complete cds Length = 1866 Score = 63.9 bits (32), Expect = 4e-07 Identities = 68/80 (85%) Strand = Plus / Plus Query: 218 ttcaccggcgccaccaacatcctctacaccttcggcggccacgccgtcacagtggagatc 277 ||||| ||||||||||| || || ||||| || || ||||| |||||||| ||||| ||| Sbjct: 808 ttcactggcgccaccaatattctttacacatttggaggccatgccgtcactgtggaaatc 867 Query: 278 atgcacgcgatgtggaagcc 297 ||||| || ||||||||||| Sbjct: 868 atgcatgccatgtggaagcc 887 Score = 44.1 bits (22), Expect = 0.39 Identities = 61/74 (82%) Strand = Plus / Plus Query: 68 ttcatcccgtcgttccacaactaccggatctggtccttcctggggctgggcatgaccacc 127 |||||||| || || ||||||||| | || ||||| || || || || || ||||||||| Sbjct: 658 ttcatcccttcttttcacaactacagaatttggtcatttcttggcctcggaatgaccacc 717 Query: 128 tacaccgcctggta 141 ||||| |||||||| Sbjct: 718 tacactgcctggta 731
>gb|AF263100.1| Populus tremula x Populus tremuloides putative AUX1-like permease (lax3) mRNA, complete cds Length = 1952 Score = 61.9 bits (31), Expect = 2e-06 Identities = 70/83 (84%) Strand = Plus / Plus Query: 215 tacttcaccggcgccaccaacatcctctacaccttcggcggccacgccgtcacagtggag 274 |||||||| || ||||| ||||| |||||||| ||||| || || ||||| || ||||| Sbjct: 809 tacttcactggggccacaaacattctctacacattcgggggacatgccgttactgtggaa 868 Query: 275 atcatgcacgcgatgtggaagcc 297 || |||||||| ||||||||||| Sbjct: 869 ataatgcacgctatgtggaagcc 891
>gb|AF190880.1| Populus tremula x Populus tremuloides putative AUX1-like permease (lax2) mRNA, complete cds Length = 2174 Score = 54.0 bits (27), Expect = 4e-04 Identities = 60/71 (84%) Strand = Plus / Plus Query: 227 gccaccaacatcctctacaccttcggcggccacgccgtcacagtggagatcatgcacgcg 286 |||||||| ||||||||||| || || || || || ||||| ||||| || |||||||| Sbjct: 1305 gccaccaatatcctctacacgtttggtgggcatgctgtcactgtggaaattatgcacgcc 1364 Query: 287 atgtggaagcc 297 ||||||||||| Sbjct: 1365 atgtggaagcc 1375 Score = 50.1 bits (25), Expect = 0.006 Identities = 100/125 (80%) Strand = Plus / Plus Query: 17 gacaagcggacgtggacatacatcttcggcgcgtgctgcgcgacgacggtgttcatcccg 76 ||||||||||| ||||| || || || || || ||||| || || || |||||||| || Sbjct: 1095 gacaagcggacatggacttatatttttggagcttgctgtgccaccacagtgttcattcct 1154 Query: 77 tcgttccacaactaccggatctggtccttcctggggctgggcatgaccacctacaccgcc 136 ||||| ||||||||| | || ||||| || || ||||| || ||||| |||||||| || Sbjct: 1155 tcgtttcacaactacagaatttggtcatttcttgggcttggaatgacgacctacacagct 1214 Query: 137 tggta 141 ||||| Sbjct: 1215 tggta 1219
>gb|AY115843.1| Medicago truncatula auxin influx carrier protein (LAX2) gene, complete cds Length = 5768 Score = 48.1 bits (24), Expect = 0.025 Identities = 66/80 (82%) Strand = Plus / Plus Query: 65 gtgttcatcccgtcgttccacaactaccggatctggtccttcctggggctgggcatgacc 124 |||||||| || || |||||||| ||||| || ||||||||||| || || || ||||| Sbjct: 1278 gtgttcataccatccttccacaattaccgtatttggtccttccttggacttggaatgact 1337 Query: 125 acctacaccgcctggtacct 144 || ||||| || |||||||| Sbjct: 1338 acatacactgcttggtacct 1357
>emb|AJ299399.1|MTR299399 Medicago truncatula mRNA for putative AUX1-like permease (lax3 gene) Length = 1585 Score = 48.1 bits (24), Expect = 0.025 Identities = 66/80 (82%) Strand = Plus / Plus Query: 215 tacttcaccggcgccaccaacatcctctacaccttcggcggccacgccgtcacagtggag 274 ||||||||||| || |||||||| ||||| ||||| || || || || || |||||||| Sbjct: 776 tacttcaccggagctaccaacattctctatacctttggtggacatgctgttacagtggaa 835 Query: 275 atcatgcacgcgatgtggaa 294 || ||||| || |||||||| Sbjct: 836 attatgcatgcaatgtggaa 855 Score = 40.1 bits (20), Expect = 6.1 Identities = 71/88 (80%) Strand = Plus / Plus Query: 15 tggacaagcggacgtggacatacatcttcggcgcgtgctgcgcgacgacggtgttcatcc 74 |||||||| | || |||||||||||||| || || || || || || || || ||||||| Sbjct: 576 tggacaagagaacttggacatacatctttggagcttgttgtgccacaacagttttcatcc 635 Query: 75 cgtcgttccacaactaccggatctggtc 102 | || |||||||| ||| | |||||||| Sbjct: 636 cttctttccacaattacagaatctggtc 663
>emb|AJ299398.1|MTR299398 Medicago truncatula mRNA for putative AUX1-like permease (lax2 gene) Length = 2121 Score = 48.1 bits (24), Expect = 0.025 Identities = 66/80 (82%) Strand = Plus / Plus Query: 65 gtgttcatcccgtcgttccacaactaccggatctggtccttcctggggctgggcatgacc 124 |||||||| || || |||||||| ||||| || ||||||||||| || || || ||||| Sbjct: 910 gtgttcataccatccttccacaattaccgtatttggtccttccttggacttggaatgact 969 Query: 125 acctacaccgcctggtacct 144 || ||||| || |||||||| Sbjct: 970 acatacactgcttggtacct 989 Score = 40.1 bits (20), Expect = 6.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 266 acagtggagatcatgcacgcgatgtggaagcc 297 ||||| ||||| |||||||| ||||||||||| Sbjct: 1111 acagtagagattatgcacgccatgtggaagcc 1142
>emb|CT030165.7| M.truncatula DNA sequence from clone MTH2-150K22 on chromosome 3, complete sequence Length = 134390 Score = 48.1 bits (24), Expect = 0.025 Identities = 66/80 (82%) Strand = Plus / Minus Query: 65 gtgttcatcccgtcgttccacaactaccggatctggtccttcctggggctgggcatgacc 124 |||||||| || || |||||||| ||||| || ||||||||||| || || || ||||| Sbjct: 42361 gtgttcataccatccttccacaattaccgtatttggtccttccttggacttggaatgact 42302 Query: 125 acctacaccgcctggtacct 144 || ||||| || |||||||| Sbjct: 42301 acatacactgcttggtacct 42282
>ref|NM_129368.2| Arabidopsis thaliana AUX1 (AUXIN RESISTANT 1); amino acid permease/ transporter AT2G38120 (AUX1) mRNA, complete cds Length = 2135 Score = 46.1 bits (23), Expect = 0.100 Identities = 41/47 (87%) Strand = Plus / Plus Query: 302 aagttcaagtacatctacctgctggcgacgctgtacgtgttcacgct 348 ||||| |||||||| ||| || |||||||| | |||||||||||||| Sbjct: 1079 aagtttaagtacatttacttgatggcgacgttatacgtgttcacgct 1125
>gb|AY093300.1| Arabidopsis thaliana unknown protein (At2g38120) mRNA, complete cds Length = 1638 Score = 46.1 bits (23), Expect = 0.100 Identities = 41/47 (87%) Strand = Plus / Plus Query: 302 aagttcaagtacatctacctgctggcgacgctgtacgtgttcacgct 348 ||||| |||||||| ||| || |||||||| | |||||||||||||| Sbjct: 790 aagtttaagtacatttacttgatggcgacgttatacgtgttcacgct 836
>gb|AC003028.3| Arabidopsis thaliana chromosome 2 clone F16M14 map ve018, complete sequence Length = 115359 Score = 46.1 bits (23), Expect = 0.100 Identities = 41/47 (87%) Strand = Plus / Plus Query: 302 aagttcaagtacatctacctgctggcgacgctgtacgtgttcacgct 348 ||||| |||||||| ||| || |||||||| | |||||||||||||| Sbjct: 43085 aagtttaagtacatttacttgatggcgacgttatacgtgttcacgct 43131
>gb|AY054488.1| Arabidopsis thaliana Unknown protein (At2g38120; F16M14.5) mRNA, complete cds Length = 2068 Score = 46.1 bits (23), Expect = 0.100 Identities = 41/47 (87%) Strand = Plus / Plus Query: 302 aagttcaagtacatctacctgctggcgacgctgtacgtgttcacgct 348 ||||| |||||||| ||| || |||||||| | |||||||||||||| Sbjct: 1079 aagtttaagtacatttacttgatggcgacgttatacgtgttcacgct 1125
>gb|AY087092.1| Arabidopsis thaliana clone 31586 mRNA, complete sequence Length = 2047 Score = 46.1 bits (23), Expect = 0.100 Identities = 41/47 (87%) Strand = Plus / Plus Query: 302 aagttcaagtacatctacctgctggcgacgctgtacgtgttcacgct 348 ||||| |||||||| ||| || |||||||| | |||||||||||||| Sbjct: 1074 aagtttaagtacatttacttgatggcgacgttatacgtgttcacgct 1120
>emb|X98772.1|ATAUX1 A.thaliana AUX1 gene Length = 4464 Score = 46.1 bits (23), Expect = 0.100 Identities = 41/47 (87%) Strand = Plus / Plus Query: 302 aagttcaagtacatctacctgctggcgacgctgtacgtgttcacgct 348 ||||| |||||||| ||| || |||||||| | |||||||||||||| Sbjct: 2829 aagtttaagtacatttacttgatggcgacgttatacgtgttcacgct 2875
>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence Length = 4895836 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 43 cggcgcgtgctgcgcgacgacg 64 |||||||||||||||||||||| Sbjct: 2165656 cggcgcgtgctgcgcgacgacg 2165635
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 147 ccatcgccgcgctcatcaacg 167 ||||||||||||||||||||| Sbjct: 91047 ccatcgccgcgctcatcaacg 91027
>gb|AY236224.1| Uncultured bacterium cosmid IIIF2 sequence Length = 28034 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 327 cgacgctgtacgtgttcacgctgacgctg 355 ||||||||||||||||| ||||| ||||| Sbjct: 26734 cgacgctgtacgtgttcgcgctggcgctg 26706
>gb|CP000316.1| Polaromonas sp. JS666, complete genome Length = 5200264 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 315 tctacctgctggcgacgctgt 335 ||||||||||||||||||||| Sbjct: 2608318 tctacctgctggcgacgctgt 2608298
>emb|BX842572.1| Mycobacterium tuberculosis H37Rv complete genome; segment 1/13 Length = 341957 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 147 ccatcgccgcgctcatcaacg 167 ||||||||||||||||||||| Sbjct: 91057 ccatcgccgcgctcatcaacg 91037
>emb|BX248334.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 1/14 Length = 343050 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 147 ccatcgccgcgctcatcaacg 167 ||||||||||||||||||||| Sbjct: 91092 ccatcgccgcgctcatcaacg 91072
>dbj|D26094.1|FVBPOAD2A Flavobacterium sp. plasmid pOAD2 DNA, whole sequence Length = 45519 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 116 ggcatgaccacctacaccgcc 136 ||||||||||||||||||||| Sbjct: 4471 ggcatgaccacctacaccgcc 4451
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 338 gtgttcacgctgacgctgccg 358 ||||||||||||||||||||| Sbjct: 4179360 gtgttcacgctgacgctgccg 4179340
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome Length = 4940217 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 223 cggcgccaccaacatcctctacacc 247 ||||||||||||| ||||||||||| Sbjct: 4769208 cggcgccaccaacctcctctacacc 4769184
>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome Length = 4941439 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 223 cggcgccaccaacatcctctacacc 247 ||||||||||||| ||||||||||| Sbjct: 4774118 cggcgccaccaacctcctctacacc 4774094
>gb|AY115842.1| Medicago truncatula auxin influx carrier protein (LAX3) gene, complete cds Length = 2979 Score = 40.1 bits (20), Expect = 6.1 Identities = 71/88 (80%) Strand = Plus / Plus Query: 15 tggacaagcggacgtggacatacatcttcggcgcgtgctgcgcgacgacggtgttcatcc 74 |||||||| | || |||||||||||||| || || || || || || || || ||||||| Sbjct: 1126 tggacaagagaacttggacatacatctttggagcttgttgtgccacaacagttttcatcc 1185 Query: 75 cgtcgttccacaactaccggatctggtc 102 | || |||||||| ||| | |||||||| Sbjct: 1186 cttctttccacaattacagaatctggtc 1213
>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence Length = 3587082 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 45 gcgcgtgctgcgcgacgacg 64 |||||||||||||||||||| Sbjct: 2309448 gcgcgtgctgcgcgacgacg 2309429
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome Length = 6438405 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 144 tcgccatcgccgcgctcatc 163 |||||||||||||||||||| Sbjct: 6341371 tcgccatcgccgcgctcatc 6341390
>emb|CR538722.1| M.truncatula DNA sequence from clone MTH2-11A20 on chromosome 3, complete sequence Length = 118829 Score = 40.1 bits (20), Expect = 6.1 Identities = 71/88 (80%) Strand = Plus / Minus Query: 15 tggacaagcggacgtggacatacatcttcggcgcgtgctgcgcgacgacggtgttcatcc 74 |||||||| | || |||||||||||||| || || || || || || || || ||||||| Sbjct: 107295 tggacaagagaacttggacatacatctttggagcttgttgtgccacaacagttttcatcc 107236 Query: 75 cgtcgttccacaactaccggatctggtc 102 | || |||||||| ||| | |||||||| Sbjct: 107235 cttctttccacaattacagaatctggtc 107208
>ref|XM_538870.2| PREDICTED: Canis familiaris similar to Metabotropic glutamate receptor 4 precursor (mGluR4) (LOC481749), mRNA Length = 2598 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 103 cttcctggggctgggcatga 122 |||||||||||||||||||| Sbjct: 1830 cttcctggggctgggcatga 1849
>emb|AJ011500.1|SVI011500 Streptomyces violaceoruber Tu22 granaticin biosynthetic gene cluster Length = 39250 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 345 cgctgacgctgccgtcggcg 364 |||||||||||||||||||| Sbjct: 2755 cgctgacgctgccgtcggcg 2774
>ref|XM_501689.1| Yarrowia lipolytica CLIB122, YALI0C10692g predicted mRNA Length = 1620 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 366 cggccatgtactgggcgtac 385 |||||||||||||||||||| Sbjct: 316 cggccatgtactgggcgtac 297
>emb|Z18946.1|MLCGA Mycobacteriophage L5 complete genome Length = 52297 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 165 acggccaggtcgagggcgtc 184 |||||||||||||||||||| Sbjct: 20283 acggccaggtcgagggcgtc 20302
>emb|BX640420.1| Bordetella pertussis strain Tohama I, complete genome; segment 10/12 Length = 348134 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 338 gtgttcacgctgacgctgcc 357 |||||||||||||||||||| Sbjct: 91721 gtgttcacgctgacgctgcc 91702
>emb|BX088700.1|CNS09S4S DNA centromeric region sequence from BAC DP26B06, DP34F04, DP16D11, DP09G08, DP35C12 of chromosome 5 of Podospora anserina Length = 322194 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 141 acctcgccatcgccgcgctc 160 |||||||||||||||||||| Sbjct: 204042 acctcgccatcgccgcgctc 204023
>emb|AJ344068.1|PPU344068 Pseudomonas putida plasmid pWW0 complete genome Length = 116580 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 321 tgctggcgacgctgtacgtg 340 |||||||||||||||||||| Sbjct: 27480 tgctggcgacgctgtacgtg 27461
>gb|DQ298255.1| Chlamydomonas reinhardtii radial spoke protein 7 (RSP7) mRNA, complete cds Length = 2209 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 351 cgctgccgtcggcgtcggcc 370 |||||||||||||||||||| Sbjct: 859 cgctgccgtcggcgtcggcc 840
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 355 gccgtcggcgtcggccatgt 374 |||||||||||||||||||| Sbjct: 6794776 gccgtcggcgtcggccatgt 6794795
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 383 tacggggacgagctgctggcgcacgcca 410 ||||| |||||||||||||||| ||||| Sbjct: 39867 tacggcgacgagctgctggcgctcgcca 39840
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 274 gatcatgcacgcgatgtgga 293 |||||||||||||||||||| Sbjct: 5010653 gatcatgcacgcgatgtgga 5010672 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 341 ttcacgctgacgctgccgtcggcg 364 |||| ||||||||||||||||||| Sbjct: 1990977 ttcaggctgacgctgccgtcggcg 1991000
>dbj|AB042755.1| Taeniopygia guttata mRNA for metabotropic GluR4, partial cds Length = 2041 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 103 cttcctggggctgggcatga 122 |||||||||||||||||||| Sbjct: 1648 cttcctggggctgggcatga 1667
>emb|X83687.1|PPTNPATIR P.putida transposase Tn4652 (left end) and terminal inverted repeat DNA Length = 604 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 321 tgctggcgacgctgtacgtg 340 |||||||||||||||||||| Sbjct: 255 tgctggcgacgctgtacgtg 236
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 350 acgctgccgtcggcgtcggc 369 |||||||||||||||||||| Sbjct: 2589877 acgctgccgtcggcgtcggc 2589896
>gb|AF151431.1|AF151431 Pseudomonas putida transposon Tn4652 transposase (tnpA), putative tpnA repressor protein (tnpC), and putative cointegrate resolution proteins S and T genes, complete cds; insertion sequence IS1246 putative transposase gene, complete cds; and putative insertion sequence transposase subunits A and B genes, complete cds Length = 17029 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 321 tgctggcgacgctgtacgtg 340 |||||||||||||||||||| Sbjct: 16775 tgctggcgacgctgtacgtg 16794
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome Length = 6181863 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 321 tgctggcgacgctgtacgtg 340 |||||||||||||||||||| Sbjct: 3383307 tgctggcgacgctgtacgtg 3383326
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 352 gctgccgtcggcgtcggcca 371 |||||||||||||||||||| Sbjct: 4687861 gctgccgtcggcgtcggcca 4687880
>emb|CR382129.1| Yarrowia lipolytica chromosome C of strain CLIB122 of Yarrowia lipolytica Length = 3272609 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 366 cggccatgtactgggcgtac 385 |||||||||||||||||||| Sbjct: 1486375 cggccatgtactgggcgtac 1486394
>dbj|AP006075.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT46K10, TM0112, complete sequence Length = 103522 Score = 40.1 bits (20), Expect = 6.1 Identities = 74/92 (80%) Strand = Plus / Plus Query: 14 ctggacaagcggacgtggacatacatcttcggcgcgtgctgcgcgacgacggtgttcatc 73 ||||||||| |||| ||||| ||||||||||| || || || || || || || || || Sbjct: 90352 ctggacaagaggacttggacttacatcttcggagcttgttgtgccaccactgtctttatt 90411 Query: 74 ccgtcgttccacaactaccggatctggtcctt 105 || || || ||||||||| | ||||||||||| Sbjct: 90412 ccttcctttcacaactacagaatctggtcctt 90443 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,750,133 Number of Sequences: 3902068 Number of extensions: 2750133 Number of successful extensions: 59104 Number of sequences better than 10.0: 98 Number of HSP's better than 10.0 without gapping: 98 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 56255 Number of HSP's gapped (non-prelim): 2839 length of query: 456 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 434 effective length of database: 17,147,199,772 effective search space: 7441884701048 effective search space used: 7441884701048 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
