Clone Information

BLAST Search Result

Clone Name	bast78c01
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	RF2B_ORYSA (Q6S4P4) Transcription factor RF2b	51	1e-06
2	RF2A_ORYSA (Q69IL4) Transcription factor RF2a	45	1e-04
3	HY5_LYCES (Q9SM50) Transcription factor HY5 (LeHY5) (tHY5)	36	0.047
4	POF21_ARATH (Q04088) Probable transcription factor PosF21 (AtbZI...	36	0.061
5	OCS1_MAIZE (P24068) Ocs element-binding factor 1 (OCSBF-1)	35	0.14
6	CPRF2_PETCR (Q99090) Light-inducible protein CPRF-2	34	0.18
7	HBP1A_WHEAT (P23922) Transcription factor HBP-1a (Histone-specif...	33	0.52
8	WASF1_MOUSE (Q8R5H6) Wiskott-Aldrich syndrome protein family mem...	28	0.60
9	WASF1_HUMAN (Q92558) Wiskott-Aldrich syndrome protein family mem...	28	0.60
10	RIR1_HHV11 (P08543) Ribonucleoside-diphosphate reductase large c...	32	0.88
11	TGA4_ARATH (Q39162) Transcription factor TGA4 (Ocs element-bindi...	32	0.88
12	GBF1_ARATH (P42774) G-box-binding factor 1 (AtbZIP41)	32	1.2
13	PKP3_MOUSE (Q9QY23) Plakophilin-3	31	1.5
14	TEGU_EBV (P03186) Large tegument protein	31	2.0
15	YIF5_YEAST (P40523) Hypothetical 70.7 kDa protein in SNP1-GPP1 i...	31	2.0
16	CPRF3_PETCR (Q99091) Light-inducible protein CPRF-3	30	2.6
17	EMBP1_WHEAT (P25032) DNA-binding protein EMBP-1 (Histone promote...	30	2.6
18	IF2_STRCO (Q8CJQ8) Translation initiation factor IF-2	26	3.3
19	CNC_DROME (P20482) Segmentation protein cap'n'collar	30	3.3
20	NOL9_HUMAN (Q5SY16) Nucleolar protein 9	30	4.4
21	FUT3_PANTR (O19058) Galactoside 3(4)-L-fucosyltransferase (EC 2....	30	4.4
22	SC24B_ARATH (Q9M081) Putative protein transport protein Sec24-li...	30	4.4
23	CI150_RAT (Q5BJW5) Protein C9orf150 homolog	30	4.4
24	CI150_MOUSE (Q8K2P1) Protein C9orf150 homolog	30	4.4
25	TGA1_ARATH (Q39237) Transcription factor TGA1 (DNA-binding prote...	30	4.4
26	TGA1B_TOBAC (P14233) TGACG-sequence-specific DNA-binding protein...	30	4.4
27	TAF1_TOBAC (Q99142) Transcriptional activator TAF-1 (Fragment)	30	4.4
28	GBF2_ARATH (P42775) G-box-binding factor 2 (AtbZIP54)	29	5.7
29	PMP3_MOUSE (P05143) Proline-rich protein MP-3 (Fragment)	25	6.0
30	GUNF_CLOTM (P26224) Endoglucanase F precursor (EC 3.2.1.4) (EGF)...	29	7.5
31	SAMD6_MOUSE (Q6GQX6) Sterile alpha motif domain-containing prote...	29	7.5
32	CPRF1_PETCR (Q99089) Common plant regulatory factor CPRF-1	29	7.5
33	HY5_ARATH (O24646) Transcription factor HY5 (Protein LONG HYPOCO...	29	7.5
34	CRTC_MAIZE (Q9SP22) Calreticulin precursor	29	7.5
35	ZN703_HUMAN (Q9H7S9) Zinc finger protein 703	29	7.5
36	GBF3_ARATH (P42776) G-box-binding factor 3 (AtbZIP55)	29	7.5
37	MAST3_HUMAN (O60307) Microtubule-associated serine/threonine-pro...	24	8.6
38	GDF6_BOVIN (P55106) Growth/differentiation factor 6 precursor (G...	28	9.7
39	CO4A1_CAEEL (P17139) Collagen alpha-1(IV) chain precursor	28	9.7
40	BMP1_MOUSE (P98063) Bone morphogenetic protein 1 precursor (EC 3...	28	9.7
41	TARA_MOUSE (Q99KW3) TRIO and F-actin-binding protein (Protein Ta...	28	9.7
42	TGA7_ARATH (Q93ZE2) Transcription factor TGA7 (AtbZIP50)	28	9.7

>RF2B_ORYSA (Q6S4P4) Transcription factor RF2b|
          Length = 329

 Score = 51.2 bits (121), Expect = 1e-06
 Identities = 48/148 (32%), Positives = 55/148 (37%), Gaps = 42/148 (28%)
 Frame = +1

Query: 130 AARRGVHRRSASDSAAFLEAVPMDHILSGGGGG--------DDEFDRLDDEQLMSMFSNV 285
           AA RG H R A    AF   +P D  L GGG G        DD F    D + +S     
Sbjct: 10  AAMRGAHHRRARSEVAF--RLPDDLDLGGGGAGAFDEIGSEDDLFSTFMDIEKISSGPAA 67

Query: 286 DGGCDRPGFMDTGEAEEGTPSAGAMAATDGFG---------------------------- 381
            GG DR    +T       P     ++ DG G                            
Sbjct: 68  AGGSDRDRAAETSSPPR--PKHRHSSSVDGSGFFAAARKDAAASLAEVMEAKKAMTPEQL 125

Query: 382 ------DPKRVKRILANRQSAQRSRVRK 447
                 DPKR KRILANRQSA RS+ RK
Sbjct: 126 SDLAAIDPKRAKRILANRQSAARSKERK 153

to top

>RF2A_ORYSA (Q69IL4) Transcription factor RF2a|
          Length = 380

 Score = 45.1 bits (105), Expect = 1e-04
 Identities = 52/194 (26%), Positives = 69/194 (35%), Gaps = 56/194 (28%)
 Frame = +1

Query: 64  PPRAPSGVEQDWPVAGEFLGFAAARRGVHRRSASDSAAFLEAVPMDHILSGGGGGDDEFD 243
           PP A +  E D     +F      R   HRR+ S+  +  E   +D   +GGG G    D
Sbjct: 26  PPAAAAAAEYDISRMPDF----PTRNPGHRRAHSEILSLPE--DLDLCAAGGGDGPSLSD 79

Query: 244 RLDDEQLMSMFSNVDGGCDRPGFMDTGEAEEGTPSA------------------------ 351
             +DE+L SMF +V+      G     EAE  +  A                        
Sbjct: 80  E-NDEELFSMFLDVEKLNSTCGASSEAEAESSSAGAAAAVAAAAAAAAHGARPKHQHSLS 138

Query: 352 -------------GAMAATDGFG-------------------DPKRVKRILANRQSAQRS 435
                        GA   T+G                     DPKR KRI ANRQSA RS
Sbjct: 139 MDESMSIKAEELVGASPGTEGMSSAEAKKAVSAAKLAELALVDPKRAKRIWANRQSAARS 198

Query: 436 RVRKLHTSQSLTQR 477
           + RK+     L ++
Sbjct: 199 KERKMRYIAELERK 212

to top

>HY5_LYCES (Q9SM50) Transcription factor HY5 (LeHY5) (tHY5)|
          Length = 158

 Score = 36.2 bits (82), Expect = 0.047
 Identities = 28/87 (32%), Positives = 38/87 (43%), Gaps = 3/87 (3%)
 Frame = +1

Query: 196 MDHILSGGGGGDDEFDRLDDEQLMSMFSNVDGGCDRPGFMDTGEAEEGTPSAGAM---AA 366
           + H L  G   DDE  R+ +     M     G     G      A +  PSAG       
Sbjct: 26  LHHELKEGMESDDEIRRVPE-----MGGEATGTTSASGRDGVSAAGQAQPSAGTQRKRGR 80

Query: 367 TDGFGDPKRVKRILANRQSAQRSRVRK 447
           +    + KR+KR+L NR SAQ++R RK
Sbjct: 81  SPADKENKRLKRLLRNRVSAQQARERK 107

to top

>POF21_ARATH (Q04088) Probable transcription factor PosF21 (AtbZIP59)|
          Length = 398

 Score = 35.8 bits (81), Expect = 0.061
 Identities = 17/22 (77%), Positives = 18/22 (81%)
 Frame = +1

Query: 382 DPKRVKRILANRQSAQRSRVRK 447
           DPKR KRI ANRQSA RS+ RK
Sbjct: 201 DPKRAKRIWANRQSAARSKERK 222

to top

>OCS1_MAIZE (P24068) Ocs element-binding factor 1 (OCSBF-1)|
          Length = 151

 Score = 34.7 bits (78), Expect = 0.14
 Identities = 20/48 (41%), Positives = 29/48 (60%), Gaps = 3/48 (6%)
 Frame = +1

Query: 340 TPSAGAMAATDGFGDP---KRVKRILANRQSAQRSRVRKLHTSQSLTQ 474
           +P+AG  + +DG       +R KR L+NR+SA+RSR+RK      L Q
Sbjct: 7   SPTAGRTSGSDGDSAADTHRREKRRLSNRESARRSRLRKQQHLDELVQ 54

to top

>CPRF2_PETCR (Q99090) Light-inducible protein CPRF-2|
          Length = 401

 Score = 34.3 bits (77), Expect = 0.18
 Identities = 18/32 (56%), Positives = 25/32 (78%), Gaps = 1/32 (3%)
 Frame = +1

Query: 382 DPKRVKRILANRQSAQRSRVRK-LHTSQSLTQ 474
           D KRV+R+L+NR+SA+RSR RK  H ++  TQ
Sbjct: 198 DAKRVRRMLSNRESARRSRRRKQAHMTELETQ 229

to top

>HBP1A_WHEAT (P23922) Transcription factor HBP-1a (Histone-specific|
           transcription factor HBP1)
          Length = 349

 Score = 32.7 bits (73), Expect = 0.52
 Identities = 19/45 (42%), Positives = 26/45 (57%)
 Frame = +1

Query: 343 PSAGAMAATDGFGDPKRVKRILANRQSAQRSRVRKLHTSQSLTQR 477
           PS  A        + K+ KR L+NR+SA+RSR+RK    + L QR
Sbjct: 239 PSGSARGEQWDERELKKQKRKLSNRESARRSRLRKQAECEELGQR 283

to top

>WASF1_MOUSE (Q8R5H6) Wiskott-Aldrich syndrome protein family member 1|
           (WASP-family protein member 1) (WAVE-1 protein)
          Length = 559

 Score = 27.7 bits (60), Expect(2) = 0.60
 Identities = 13/30 (43%), Positives = 18/30 (60%)
 Frame = -1

Query: 380 PKPSVAAIAPALGVPSSASPVSMKPGLSHP 291
           P P+ A  APA  VP   +P+ + PG+ HP
Sbjct: 357 PPPATALQAPA--VPPPPAPLQIAPGVLHP 384



 Score = 23.5 bits (49), Expect(2) = 0.60
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = -2

Query: 187 PPGKPPNRWPSAGARPAGP 131
           PP  PP   P  G RP+ P
Sbjct: 424 PPPPPPPPLPPPGIRPSSP 442

to top

>WASF1_HUMAN (Q92558) Wiskott-Aldrich syndrome protein family member 1|
           (WASP-family protein member 1) (WAVE-1 protein)
           (Verprolin homology domain-containing protein 1)
          Length = 559

 Score = 27.7 bits (60), Expect(2) = 0.60
 Identities = 13/30 (43%), Positives = 18/30 (60%)
 Frame = -1

Query: 380 PKPSVAAIAPALGVPSSASPVSMKPGLSHP 291
           P P+ A  APA  VP   +P+ + PG+ HP
Sbjct: 357 PPPATALQAPA--VPPPPAPLQIAPGVLHP 384



 Score = 23.5 bits (49), Expect(2) = 0.60
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = -2

Query: 187 PPGKPPNRWPSAGARPAGP 131
           PP  PP   P  G RP+ P
Sbjct: 424 PPPPPPPPLPPPGIRPSSP 442

to top

>RIR1_HHV11 (P08543) Ribonucleoside-diphosphate reductase large chain (EC|
           1.17.4.1) (Ribonucleotide reductase) (136 kDa subunit)
          Length = 1137

 Score = 32.0 bits (71), Expect = 0.88
 Identities = 24/79 (30%), Positives = 31/79 (39%), Gaps = 2/79 (2%)
 Frame = +1

Query: 157 SASDSAAFLEAVPMDHILSGGGGGDDEFDRLDDEQLMSMFSNVDGGCDRPGFMDTGEAE- 333
           S SD +   ++  + H  S   GG    D LD +        +DG   RP   DT   + 
Sbjct: 196 SDSDDSEDTDSETLSHASSDVSGGATYDDALDSDSSSDDSLQIDGPVCRPWSNDTAPLDV 255

Query: 334 -EGTPSAGAMAATDGFGDP 387
             GTP  GA A      DP
Sbjct: 256 CPGTPGPGADAGGPSAVDP 274

to top

>TGA4_ARATH (Q39162) Transcription factor TGA4 (Ocs element-binding factor 4)|
           (OBF4) (AtbZIP57)
          Length = 364

 Score = 32.0 bits (71), Expect = 0.88
 Identities = 18/51 (35%), Positives = 26/51 (50%)
 Frame = +1

Query: 316 DTGEAEEGTPSAGAMAATDGFGDPKRVKRILANRQSAQRSRVRKLHTSQSL 468
           DT    EGTP      A+      K  +R+  NR++A++SR+RK    Q L
Sbjct: 56  DTSHGTEGTPHKFDQEASTSRHPDKIQRRLAQNREAARKSRLRKKAYVQQL 106

to top

>GBF1_ARATH (P42774) G-box-binding factor 1 (AtbZIP41)|
          Length = 315

 Score = 31.6 bits (70), Expect = 1.2
 Identities = 16/30 (53%), Positives = 21/30 (70%)
 Frame = +1

Query: 388 KRVKRILANRQSAQRSRVRKLHTSQSLTQR 477
           KR KR  +NR+SA+RSR+RK    + L QR
Sbjct: 224 KRQKRKQSNRESARRSRLRKQAECEQLQQR 253

to top

>PKP3_MOUSE (Q9QY23) Plakophilin-3|
          Length = 797

 Score = 31.2 bits (69), Expect = 1.5
 Identities = 27/106 (25%), Positives = 40/106 (37%), Gaps = 9/106 (8%)
 Frame = +1

Query: 148 HRRSASDSAAFLEAVPMDHILSGGGGGDDEFDRLDDE---------QLMSMFSNVDGGCD 300
           H R  + S A  + + +  +  G GG DD +  + ++         +  +       G  
Sbjct: 165 HERGGAASRADYDTLSLPSLRLGPGGLDDRYSVVSEQLEPAAASTYRAYAYKRQASSGSS 224

Query: 301 RPGFMDTGEAEEGTPSAGAMAATDGFGDPKRVKRILANRQSAQRSR 438
           R G +D  EA EG PS    A            R L   QS+ RSR
Sbjct: 225 RAGGLDWPEATEGPPSRTIRAP---------AMRTLQRFQSSHRSR 261

to top

>TEGU_EBV (P03186) Large tegument protein|
          Length = 3149

 Score = 30.8 bits (68), Expect = 2.0
 Identities = 15/33 (45%), Positives = 19/33 (57%)
 Frame = -1

Query: 383 SPKPSVAAIAPALGVPSSASPVSMKPGLSHPPS 285
           SP  S A+ APA   P+SA+P S  P  + P S
Sbjct: 330 SPPSSPASAAPASAAPASAAPASAAPASAAPAS 362

to top

>YIF5_YEAST (P40523) Hypothetical 70.7 kDa protein in SNP1-GPP1 intergenic|
           region
          Length = 627

 Score = 30.8 bits (68), Expect = 2.0
 Identities = 16/45 (35%), Positives = 20/45 (44%)
 Frame = -1

Query: 398 LTLLGSPKPSVAAIAPALGVPSSASPVSMKPGLSHPPSTLENMDM 264
           +T L +P P    + P    P      SM P L  PP T+ NM M
Sbjct: 204 ITPLPTPVPVPVGVPPLAPPPHGPFSTSMLPMLGAPPGTVPNMQM 248

to top

>CPRF3_PETCR (Q99091) Light-inducible protein CPRF-3|
          Length = 296

 Score = 30.4 bits (67), Expect = 2.6
 Identities = 15/30 (50%), Positives = 21/30 (70%)
 Frame = +1

Query: 388 KRVKRILANRQSAQRSRVRKLHTSQSLTQR 477
           KR +R  +NR+SA+RSR+RK   S  L +R
Sbjct: 198 KRQRRKQSNRESARRSRLRKQAKSDELQER 227

to top

>EMBP1_WHEAT (P25032) DNA-binding protein EMBP-1 (Histone promoter-binding|
           protein 1a(1)) (HBP-1a(1))
          Length = 354

 Score = 30.4 bits (67), Expect = 2.6
 Identities = 14/30 (46%), Positives = 21/30 (70%)
 Frame = +1

Query: 388 KRVKRILANRQSAQRSRVRKLHTSQSLTQR 477
           KR +R  +NR+SA+RSR+RK    + L Q+
Sbjct: 252 KRERRKQSNRESARRSRLRKQQECEELAQK 281

to top

>IF2_STRCO (Q8CJQ8) Translation initiation factor IF-2|
          Length = 1033

 Score = 25.8 bits (55), Expect(2) = 3.3
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = -2

Query: 190 RPPGKPPNRWPSAGARPAGPQRTRG 116
           +P G  P      GARP+GP + RG
Sbjct: 165 KPGGARPGAPKPGGARPSGPGQDRG 189



 Score = 22.7 bits (47), Expect(2) = 3.3
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = -1

Query: 383 SPKPSVAAIAPALGVPSSASPVSMKPGLSHPPS 285
           +P+PS A  APA   P++ S  +  P     P+
Sbjct: 96  APRPSAAPKAPAAQQPAAPSAPAPAPSQGPRPT 128

to top

>CNC_DROME (P20482) Segmentation protein cap'n'collar|
          Length = 1383

 Score = 30.0 bits (66), Expect = 3.3
 Identities = 26/76 (34%), Positives = 32/76 (42%), Gaps = 3/76 (3%)
 Frame = +1

Query: 133  ARRGVHRRSASDSAAFLEAVPMDHILSGGGGGDDEFDRLD---DEQLMSMFSNVDGGCDR 303
            A  GV   S S   A    +  D + SGG G     DRLD   D  + SM      G +R
Sbjct: 894  ASGGVGSMSGSAVGAGATGMTADLLASGGAGAQGGADRLDASSDSAVSSM------GSER 947

Query: 304  PGFMDTGEAEEGTPSA 351
               +  GE  EG+ SA
Sbjct: 948  VPSLSDGEWGEGSDSA 963

to top

>NOL9_HUMAN (Q5SY16) Nucleolar protein 9|
          Length = 702

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 19/50 (38%), Positives = 24/50 (48%), Gaps = 14/50 (28%)
 Frame = -3

Query: 183 QESRRIAGR-------APVHAPPGRSEPEE-------LSCHRPVLLHPAR 76
           Q SR  A R       +P+ +P   SEPE         SCHRP+L+ P R
Sbjct: 68  QVSRAAAARRPNTATPSPIPSPTPASEPESEPELESASSCHRPLLIPPVR 117

to top

>FUT3_PANTR (O19058) Galactoside 3(4)-L-fucosyltransferase (EC 2.4.1.65) (Blood|
           group Lewis alpha-4-fucosyltransferase) (Lewis FT)
           (Fucosyltransferase 3) (FUCT-III)
           (Alpha-3/4-fucosyltransferase)
          Length = 372

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
 Frame = -1

Query: 431 LCADCLFANILLT---LLGSPKPSVAAIAPALGVPSSASPVSMKP 306
           L A C F+ + ++     GSP+P + A+ P  G PS +S     P
Sbjct: 25  LVAVCFFSYLRVSRDDATGSPRPGLMAVEPVTGAPSGSSRQDTTP 69

to top

>SC24B_ARATH (Q9M081) Putative protein transport protein Sec24-like At4g32640|
          Length = 1069

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 14/23 (60%), Positives = 17/23 (73%)
 Frame = -2

Query: 199 PLARPPGKPPNRWPSAGARPAGP 131
           PL RP G PP+R PS G+RP+ P
Sbjct: 114 PLNRPTG-PPSRQPSFGSRPSMP 135

to top

>CI150_RAT (Q5BJW5) Protein C9orf150 homolog|
          Length = 221

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 16/39 (41%), Positives = 23/39 (58%)
 Frame = -1

Query: 383 SPKPSVAAIAPALGVPSSASPVSMKPGLSHPPSTLENMD 267
           S   S ++ AP++   SS+SP S  P  SH PS LE ++
Sbjct: 50  SSSSSCSSFAPSVSSSSSSSPASGSPRRSH-PSALERLE 87

to top

>CI150_MOUSE (Q8K2P1) Protein C9orf150 homolog|
          Length = 221

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 16/39 (41%), Positives = 23/39 (58%)
 Frame = -1

Query: 383 SPKPSVAAIAPALGVPSSASPVSMKPGLSHPPSTLENMD 267
           S   S ++ AP++   SS+SP S  P  SH PS LE ++
Sbjct: 50  SSSSSCSSFAPSVSSSSSSSPASGSPRRSH-PSALERLE 87

to top

>TGA1_ARATH (Q39237) Transcription factor TGA1 (DNA-binding protein TGA1a-like|
           protein) (AtbZIP47)
          Length = 368

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 17/51 (33%), Positives = 25/51 (49%)
 Frame = +1

Query: 316 DTGEAEEGTPSAGAMAATDGFGDPKRVKRILANRQSAQRSRVRKLHTSQSL 468
           DT     GTP      A+      K  +R+  NR++A++SR+RK    Q L
Sbjct: 60  DTSHGTAGTPHMFDQEASTSRHPDKIQRRLAQNREAARKSRLRKKAYVQQL 110

to top

>TGA1B_TOBAC (P14233) TGACG-sequence-specific DNA-binding protein TGA-1B (TGA1b)|
           (HSBF) (Fragment)
          Length = 242

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 14/32 (43%), Positives = 20/32 (62%)
 Frame = +1

Query: 382 DPKRVKRILANRQSAQRSRVRKLHTSQSLTQR 477
           D K+  R++ NR+SAQ SR RK H  + L  +
Sbjct: 183 DEKKRARLVRNRESAQLSRQRKKHYVEELEDK 214

to top

>TAF1_TOBAC (Q99142) Transcriptional activator TAF-1 (Fragment)|
          Length = 265

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 15/30 (50%), Positives = 21/30 (70%)
 Frame = +1

Query: 388 KRVKRILANRQSAQRSRVRKLHTSQSLTQR 477
           KR KR  +NR+SA+RSR+RK   ++ L  R
Sbjct: 196 KREKRKQSNRESARRSRLRKQAEAEELAIR 225

to top

>GBF2_ARATH (P42775) G-box-binding factor 2 (AtbZIP54)|
          Length = 360

 Score = 29.3 bits (64), Expect = 5.7
 Identities = 14/28 (50%), Positives = 21/28 (75%)
 Frame = +1

Query: 388 KRVKRILANRQSAQRSRVRKLHTSQSLT 471
           KR KR  +NR+SA+RSR+RK   ++ L+
Sbjct: 251 KREKRKQSNRESARRSRLRKQAETEQLS 278

to top

>PMP3_MOUSE (P05143) Proline-rich protein MP-3 (Fragment)|
          Length = 296

 Score = 25.4 bits (54), Expect(2) = 6.0
 Identities = 13/30 (43%), Positives = 15/30 (50%), Gaps = 5/30 (16%)
 Frame = -2

Query: 202 GPLARPPGKPP-----NRWPSAGARPAGPQ 128
           GP  RPP  PP     +  P+ G  P GPQ
Sbjct: 190 GPQPRPPQGPPPPGGPHPRPTQGPPPTGPQ 219



 Score = 22.3 bits (46), Expect(2) = 6.0
 Identities = 10/33 (30%), Positives = 13/33 (39%)
 Frame = -1

Query: 386 GSPKPSVAAIAPALGVPSSASPVSMKPGLSHPP 288
           G P P+   + P  G P +  P    P    PP
Sbjct: 156 GPPPPAGPHLRPTQGPPPTGGPQQRYPQSPPPP 188

to top

>GUNF_CLOTM (P26224) Endoglucanase F precursor (EC 3.2.1.4) (EGF)|
           (Endo-1,4-beta-glucanase) (Cellulase F)
          Length = 739

 Score = 28.9 bits (63), Expect = 7.5
 Identities = 22/59 (37%), Positives = 29/59 (49%), Gaps = 7/59 (11%)
 Frame = +1

Query: 139 RGVHRRSASDSAAFLEAVPMD--HILSG---GG--GGDDEFDRLDDEQLMSMFSNVDGG 294
           R  H R+A  S + L   P +  HIL G   GG  G D   DRLDD Q   + ++ + G
Sbjct: 397 RNPHHRTAHSSWSALMTEPAECRHILVGALVGGPDGSDSYVDRLDDYQCNEVANDYNAG 455

to top

>SAMD6_MOUSE (Q6GQX6) Sterile alpha motif domain-containing protein 6|
          Length = 883

 Score = 28.9 bits (63), Expect = 7.5
 Identities = 12/22 (54%), Positives = 13/22 (59%)
 Frame = -2

Query: 184 PGKPPNRWPSAGARPAGPQRTR 119
           PG  P   P AGA PAGP+  R
Sbjct: 31  PGADPVAGPEAGAEPAGPEAVR 52

to top

>CPRF1_PETCR (Q99089) Common plant regulatory factor CPRF-1|
          Length = 411

 Score = 28.9 bits (63), Expect = 7.5
 Identities = 14/29 (48%), Positives = 21/29 (72%)
 Frame = +1

Query: 382 DPKRVKRILANRQSAQRSRVRKLHTSQSL 468
           D KR +R  +NR+SA+RSR+RK   ++ L
Sbjct: 269 DLKRERRKQSNRESARRSRLRKQAEAEEL 297

to top

>HY5_ARATH (O24646) Transcription factor HY5 (Protein LONG HYPOCOL5)|
           (AtbZIP56)
          Length = 168

 Score = 28.9 bits (63), Expect = 7.5
 Identities = 13/20 (65%), Positives = 17/20 (85%)
 Frame = +1

Query: 388 KRVKRILANRQSAQRSRVRK 447
           KR+KR+L NR SAQ++R RK
Sbjct: 90  KRLKRLLRNRVSAQQARERK 109

to top

>CRTC_MAIZE (Q9SP22) Calreticulin precursor|
          Length = 420

 Score = 28.9 bits (63), Expect = 7.5
 Identities = 18/46 (39%), Positives = 23/46 (50%)
 Frame = +1

Query: 124 FAAARRGVHRRSASDSAAFLEAVPMDHILSGGGGGDDEFDRLDDEQ 261
           FA    G H+ +  + AAF EA           GGDDE D L+DE+
Sbjct: 349 FAEETWGKHKEA--EKAAFDEAEKKKEEEDAAKGGDDEDDDLEDEE 392

to top

>ZN703_HUMAN (Q9H7S9) Zinc finger protein 703|
          Length = 590

 Score = 28.9 bits (63), Expect = 7.5
 Identities = 12/21 (57%), Positives = 13/21 (61%)
 Frame = -2

Query: 202 GPLARPPGKPPNRWPSAGARP 140
           G L  PPGKPP+  P  GA P
Sbjct: 348 GGLGLPPGKPPSSSPLTGASP 368

to top

>GBF3_ARATH (P42776) G-box-binding factor 3 (AtbZIP55)|
          Length = 382

 Score = 28.9 bits (63), Expect = 7.5
 Identities = 13/30 (43%), Positives = 22/30 (73%)
 Frame = +1

Query: 388 KRVKRILANRQSAQRSRVRKLHTSQSLTQR 477
           KR +R  +NR+SA+RSR+RK   ++ L ++
Sbjct: 261 KRERRKQSNRESARRSRLRKQAETEELARK 290

to top

>MAST3_HUMAN (O60307) Microtubule-associated serine/threonine-protein kinase 3 (EC|
            2.7.11.1)
          Length = 1309

 Score = 23.9 bits (50), Expect(2) = 8.6
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = -2

Query: 205  CGPLARPPGKPPNRWPSAGARPAGPQRTR 119
            C P++ PP + P+  P     PA   R R
Sbjct: 1191 CPPISAPPPRSPSPLPGHPPAPARSPRLR 1219



 Score = 23.1 bits (48), Expect(2) = 8.6
 Identities = 15/41 (36%), Positives = 19/41 (46%), Gaps = 3/41 (7%)
 Frame = -1

Query: 383  SPKPSVAA---IAPALGVPSSASPVSMKPGLSHPPSTLENM 270
            SP P V A    +P    PSS+SP S        PS+L  +
Sbjct: 1124 SPAPDVPADTTASPPSASPSSSSPASPAAAGHTRPSSLHGL 1164

to top

>GDF6_BOVIN (P55106) Growth/differentiation factor 6 precursor (GDF-6)|
           (Cartilage-derived morphogenetic protein 2) (CDMP-2)
           (Fragment)
          Length = 436

 Score = 28.5 bits (62), Expect = 9.7
 Identities = 14/32 (43%), Positives = 15/32 (46%)
 Frame = -2

Query: 208 GCGPLARPPGKPPNRWPSAGARPAGPQRTRGT 113
           G GP   PP  PP+  P AG     P R R T
Sbjct: 286 GSGPPPPPPPPPPSGTPDAGLWSPSPGRRRRT 317

to top

>CO4A1_CAEEL (P17139) Collagen alpha-1(IV) chain precursor|
          Length = 1759

 Score = 28.5 bits (62), Expect = 9.7
 Identities = 14/41 (34%), Positives = 18/41 (43%)
 Frame = +1

Query: 274 FSNVDGGCDRPGFMDTGEAEEGTPSAGAMAATDGFGDPKRV 396
           F+ +DG C  PG     +   G P A       GFG P +V
Sbjct: 795 FNGIDGDCGEPGL----DGYPGAPGAPGAPGETGFGFPGQV 831

to top

>BMP1_MOUSE (P98063) Bone morphogenetic protein 1 precursor (EC 3.4.24.19)|
           (BMP-1) (Procollagen C-proteinase) (PCP) (Mammalian
           tolloid protein) (mTld)
          Length = 991

 Score = 28.5 bits (62), Expect = 9.7
 Identities = 17/46 (36%), Positives = 22/46 (47%)
 Frame = +2

Query: 50  KWRSCPRERRAGWSRTGRWQESSSGSLRPGGACTGARPAIRRLSWR 187
           +WR  PR RRA  SR  R           GG  TG++ A+ R + R
Sbjct: 116 RWRGRPRSRRAATSRPERVWPDGVIPFVIGGNFTGSQRAVFRQAMR 161

to top

>TARA_MOUSE (Q99KW3) TRIO and F-actin-binding protein (Protein Tara)|
            (Trio-associated repeat on actin)
          Length = 2014

 Score = 28.5 bits (62), Expect = 9.7
 Identities = 16/48 (33%), Positives = 24/48 (50%)
 Frame = +2

Query: 53   WRSCPRERRAGWSRTGRWQESSSGSLRPGGACTGARPAIRRLSWRPCQ 196
            WR  P+E R  W  +  W+E  S  ++  GA    +  ++ LS RP Q
Sbjct: 1134 WRGPPQEHREQWGHSEAWEEPPSNGIQ--GAPPRGQGRLQELS-RPHQ 1178

to top

>TGA7_ARATH (Q93ZE2) Transcription factor TGA7 (AtbZIP50)|
          Length = 368

 Score = 28.5 bits (62), Expect = 9.7
 Identities = 18/50 (36%), Positives = 28/50 (56%)
 Frame = +1

Query: 325 EAEEGTPSAGAMAATDGFGDPKRVKRILANRQSAQRSRVRKLHTSQSLTQ 474
           EAE+  PS+      DG    K  +R+  NR++A++SR+RK    Q L +
Sbjct: 74  EAEQ--PSSNDNQDDDGRIHDKMKRRLAQNREAARKSRLRKKAYVQQLEE 121


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 59,532,668
Number of Sequences: 219361
Number of extensions: 1148311
Number of successful extensions: 6062
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 5184
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6017
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3304846491
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

to top

full-length cDNA and EST

Clone Information

BLAST Search Result