>ref|XM_464809.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 810

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 104/123 (84%), Gaps = 2/123 (1%)
 Strand = Plus / Plus

                                                                       
Query: 361 gccgccacggacggcttcggtgaccccaagagggttaaaaggatattggcgaacaggcag 420
           |||||| |||||||| | |  ||||||||||| || || ||||| ||||| |||||||||
Sbjct: 397 gccgccgcggacggcattgccgaccccaagagagtcaagaggattttggcaaacaggcag 456

                                                                       
Query: 421 tcagcgcagaggtcaagagtacgtaagttgca-tacatctcagagcttga-cgcagcgtc 478
           || |||||| ||||||| ||  | |||||||| |||||||| |||||||| |||||||||
Sbjct: 457 tcggcgcagcggtcaagggtgagaaagttgcagtacatctctgagcttgagcgcagcgtc 516

              
Query: 479 acc 481
           |||
Sbjct: 517 acc 519



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 43/46 (93%)
 Strand = Plus / Plus

                                                         
Query: 234 cgagtttgacaggctcgacgacgagcagctcatgtccatgttctcc 279
           |||||| ||| ||||||||||||| |||||||||||||||||||||
Sbjct: 204 cgagttcgaccggctcgacgacgaacagctcatgtccatgttctcc 249

>gb|AY107108.1| Zea mays PCO062113 mRNA sequence
          Length = 730

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 98/116 (84%), Gaps = 2/116 (1%)
 Strand = Plus / Plus

                                                                       
Query: 368 cggacggcttcggtgaccccaagagggttaaaaggatattggcgaacaggcagtcagcgc 427
           |||||||| ||| ||| ||||| ||||| || ||||||||||| ||||||||||| || |
Sbjct: 147 cggacggcgtcgctgagcccaaaagggtcaagaggatattggcaaacaggcagtcggctc 206

                                                                   
Query: 428 agaggtcaagagtacgtaagttgca-tacatctcagagcttg-acgcagcgtcacc 481
           |||||||| ||||  | ||| |||| |||||||| ||||||| ||| |||||||||
Sbjct: 207 agaggtcacgagtgaggaagctgcagtacatctcggagcttgaacggagcgtcacc 262



 Score = 40.1 bits (20), Expect = 6.5
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                               
Query: 254 acgagcagctcatgtccatgttctccaatgtcgacg 289
           |||| |||||| |||||||||||||| | |||||||
Sbjct: 2   acgaccagctcctgtccatgttctccgacgtcgacg 37

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 43/46 (93%)
 Strand = Plus / Plus

                                                             
Query: 234     cgagtttgacaggctcgacgacgagcagctcatgtccatgttctcc 279
               |||||| ||| ||||||||||||| |||||||||||||||||||||
Sbjct: 8323290 cgagttcgaccggctcgacgacgaacagctcatgtccatgttctcc 8323335



 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 73/84 (86%), Gaps = 2/84 (2%)
 Strand = Plus / Plus

                                                                           
Query: 400     aggatattggcgaacaggcagtcagcgcagaggtcaagagtacgtaagttgca-tacatc 458
               ||||| ||||| ||||||||||| |||||| ||||||| ||  | |||||||| ||||||
Sbjct: 8323927 aggattttggcaaacaggcagtcggcgcagcggtcaagggtgagaaagttgcagtacatc 8323986

                                       
Query: 459     tcagagcttga-cgcagcgtcacc 481
               || |||||||| ||||||||||||
Sbjct: 8323987 tctgagcttgagcgcagcgtcacc 8324010

>dbj|AP005614.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OSJNBa0090H18
          Length = 174842

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 43/46 (93%)
 Strand = Plus / Plus

                                                            
Query: 234    cgagtttgacaggctcgacgacgagcagctcatgtccatgttctcc 279
              |||||| ||| ||||||||||||| |||||||||||||||||||||
Sbjct: 99961  cgagttcgaccggctcgacgacgaacagctcatgtccatgttctcc 100006



 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 73/84 (86%), Gaps = 2/84 (2%)
 Strand = Plus / Plus

                                                                          
Query: 400    aggatattggcgaacaggcagtcagcgcagaggtcaagagtacgtaagttgca-tacatc 458
              ||||| ||||| ||||||||||| |||||| ||||||| ||  | |||||||| ||||||
Sbjct: 100598 aggattttggcaaacaggcagtcggcgcagcggtcaagggtgagaaagttgcagtacatc 100657

                                      
Query: 459    tcagagcttga-cgcagcgtcacc 481
              || |||||||| ||||||||||||
Sbjct: 100658 tctgagcttgagcgcagcgtcacc 100681

>ref|NM_191282.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1170

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 40/43 (93%)
 Strand = Plus / Plus

                                                      
Query: 234 cgagtttgacaggctcgacgacgagcagctcatgtccatgttc 276
           |||||| ||||||||||||||||| ||||||||||| ||||||
Sbjct: 201 cgagttcgacaggctcgacgacgaccagctcatgtctatgttc 243



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 45/53 (84%)
 Strand = Plus / Plus

                                                                
Query: 382 gaccccaagagggttaaaaggatattggcgaacaggcagtcagcgcagaggtc 434
           |||||||||||||| || |||||| |||| ||  ||||||| || ||||||||
Sbjct: 409 gaccccaagagggtcaagaggatactggctaatcggcagtcggcccagaggtc 461

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 40/43 (93%)
 Strand = Plus / Plus

                                                           
Query: 234      cgagtttgacaggctcgacgacgagcagctcatgtccatgttc 276
                |||||| ||||||||||||||||| ||||||||||| ||||||
Sbjct: 31721556 cgagttcgacaggctcgacgacgaccagctcatgtctatgttc 31721598



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 32/33 (96%)
 Strand = Plus / Minus

                                                
Query: 247     ctcgacgacgagcagctcatgtccatgttctcc 279
               ||||||||||| |||||||||||||||||||||
Sbjct: 6095104 ctcgacgacgaccagctcatgtccatgttctcc 6095072

>dbj|AP003268.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0503C12
          Length = 147180

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 40/43 (93%)
 Strand = Plus / Plus

                                                         
Query: 234    cgagtttgacaggctcgacgacgagcagctcatgtccatgttc 276
              |||||| ||||||||||||||||| ||||||||||| ||||||
Sbjct: 135288 cgagttcgacaggctcgacgacgaccagctcatgtctatgttc 135330

>dbj|AK108553.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-144-E08, full
           insert sequence
          Length = 1111

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 40/43 (93%)
 Strand = Plus / Plus

                                                      
Query: 234 cgagtttgacaggctcgacgacgagcagctcatgtccatgttc 276
           |||||| ||||||||||||||||| ||||||||||| ||||||
Sbjct: 284 cgagttcgacaggctcgacgacgaccagctcatgtctatgttc 326



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 45/53 (84%)
 Strand = Plus / Plus

                                                                
Query: 382 gaccccaagagggttaaaaggatattggcgaacaggcagtcagcgcagaggtc 434
           |||||||||||||| || |||||| |||| ||  ||||||| || ||||||||
Sbjct: 492 gaccccaagagggtcaagaggatactggctaatcggcagtcggcccagaggtc 544

>ref|NM_188406.1| Oryza sativa (japonica cultivar-group), Ozsa8132 predicted mRNA
          Length = 864

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 32/33 (96%)
 Strand = Plus / Plus

                                            
Query: 247 ctcgacgacgagcagctcatgtccatgttctcc 279
           ||||||||||| |||||||||||||||||||||
Sbjct: 241 ctcgacgacgaccagctcatgtccatgttctcc 273

>dbj|AP002092.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0031E09
          Length = 176349

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 32/33 (96%)
 Strand = Plus / Minus

                                               
Query: 247    ctcgacgacgagcagctcatgtccatgttctcc 279
              ||||||||||| |||||||||||||||||||||
Sbjct: 119461 ctcgacgacgaccagctcatgtccatgttctcc 119429

>dbj|AK100944.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023138F18, full
           insert sequence
          Length = 1484

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 32/33 (96%)
 Strand = Plus / Plus

                                            
Query: 247 ctcgacgacgagcagctcatgtccatgttctcc 279
           ||||||||||| |||||||||||||||||||||
Sbjct: 426 ctcgacgacgaccagctcatgtccatgttctcc 458

>gb|BT015951.1| Drosophila melanogaster SD16632 full insert cDNA
          Length = 5520

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 84   ggtggagcaggactggccggtggca 108
            |||||||||||| ||||||||||||
Sbjct: 3715 ggtggagcaggagtggccggtggca 3739

>ref|XM_747906.1| Aspergillus fumigatus Af293 hypothetical protein (Afu1g16330) partial
            mRNA
          Length = 2367

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 318  cacgggagaggcggaggaggg 338
            |||||||||||||||||||||
Sbjct: 1633 cacgggagaggcggaggaggg 1613

>emb|BX294139.1| Pirellula sp. strain 1 complete genome; segment 7/24
          Length = 287650

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 363    cgccacggacggcttcggtga 383
              |||||||||||||||||||||
Sbjct: 142648 cgccacggacggcttcggtga 142628

>gb|AY050240.1| Drosophila melanogaster SD02490 full length cDNA
          Length = 4701

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 84   ggtggagcaggactggccggtggca 108
            |||||||||||| ||||||||||||
Sbjct: 2896 ggtggagcaggagtggccggtggca 2920

>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 127      gctgcggcccggcggggcgtg 147
                |||||||||||||||||||||
Sbjct: 22275826 gctgcggcccggcggggcgtg 22275806

>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome
          Length = 1849742

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 327    ggcggaggaggggacgcccag 347
              |||||||||||||||||||||
Sbjct: 883629 ggcggaggaggggacgcccag 883649

>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 116    tcctcgggttcgctgcggcccggcg 140
              ||||||| |||||||||||||||||
Sbjct: 553267 tcctcggattcgctgcggcccggcg 553291

>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 134     cccggcggggcgtgcaccggc 154
               |||||||||||||||||||||
Sbjct: 4556986 cccggcggggcgtgcaccggc 4556966

>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 127      gctgcggcccggcggggcgtg 147
                |||||||||||||||||||||
Sbjct: 22204171 gctgcggcccggcggggcgtg 22204151

>emb|AL731741.5|CNS08C7Q Oryza sativa chromosome 12, . BAC OJ1298_D03 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 109610

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 127   gctgcggcccggcggggcgtg 147
             |||||||||||||||||||||
Sbjct: 85928 gctgcggcccggcggggcgtg 85948

>gb|CP000027.1| Dehalococcoides ethenogenes 195, complete genome
          Length = 1469720

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 373    ggcttcggtgaccccaagagggtt 396
              |||||||||||| |||||||||||
Sbjct: 318148 ggcttcggtgacaccaagagggtt 318171

>dbj|AP008230.1| Desulfitobacterium hafniense Y51 genomic DNA, complete genome
          Length = 5727534

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 397     aaaaggatattggcgaacag 416
               ||||||||||||||||||||
Sbjct: 1957316 aaaaggatattggcgaacag 1957335

>ref|NM_206292.1| Drosophila melanogaster CG7526-RB, transcript variant B (CG7526),
           mRNA
          Length = 4992

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 252 cgacgagcagctcatgtcca 271
           ||||||||||||||||||||
Sbjct: 310 cgacgagcagctcatgtcca 291

>ref|NM_139880.2| Drosophila melanogaster CG7526-RA, transcript variant A (CG7526),
           mRNA
          Length = 5308

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 252 cgacgagcagctcatgtcca 271
           ||||||||||||||||||||
Sbjct: 626 cgacgagcagctcatgtcca 607

>gb|AC010113.6| Drosophila melanogaster 3L BAC RPCI98-10H23 (Roswell Park Cancer
             Institute Drosophila BAC Library) complete sequence
          Length = 182898

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 252   cgacgagcagctcatgtcca 271
             ||||||||||||||||||||
Sbjct: 98138 cgacgagcagctcatgtcca 98119

>gb|AC160981.2| Mus musculus BAC clone RP23-363D11 from chromosome 9, complete sequence
          Length = 175606

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 4     cacatggtacatagaaccca 23
             ||||||||||||||||||||
Sbjct: 95953 cacatggtacatagaaccca 95934

>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 84      ggtggagcaggactggccgg 103
               ||||||||||||||||||||
Sbjct: 4184502 ggtggagcaggactggccgg 4184521

>gb|AE003558.3| Drosophila melanogaster chromosome 3L, section 27 of 83 of the complete
             sequence
          Length = 284442

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 252   cgacgagcagctcatgtcca 271
             ||||||||||||||||||||
Sbjct: 85070 cgacgagcagctcatgtcca 85051

>emb|AL805906.7| Mouse DNA sequence from clone RP23-113J20 on chromosome 4, complete
              sequence
          Length = 176416

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 37     tgcttagctcaggaaatggc 56
              ||||||||||||||||||||
Sbjct: 141425 tgcttagctcaggaaatggc 141406

>emb|AL928930.9| Mouse DNA sequence from clone RP23-386P7 on chromosome 2, complete
            sequence
          Length = 155721

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 104  tggcaggagagttcctcggg 123
            ||||||||||||||||||||
Sbjct: 5242 tggcaggagagttcctcggg 5223


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,859,033
Number of Sequences: 3902068
Number of extensions: 2859033
Number of successful extensions: 58154
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 57535
Number of HSP's gapped (non-prelim): 619
length of query: 482
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 460
effective length of database: 17,147,199,772
effective search space: 7887711895120
effective search space used: 7887711895120
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)