ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | bast78b11 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC123824.4| Mus musculus BAC clone RP24-84D16 from chromosome 12, complete sequence Length = 205607 Score = 46.1 bits (23), Expect = 0.097 Identities = 26/27 (96%) Strand = Plus / Plus Query: 366 ttgtttggtttggttttgtctggtgtt 392 |||||||||||||||| |||||||||| Sbjct: 82775 ttgtttggtttggtttggtctggtgtt 82801
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 422 aaaatgtgggtggcggagcggg 443 |||||||||||||||||||||| Sbjct: 10521002 aaaatgtgggtggcggagcggg 10520981 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 87 ccgcgccgcgccgcgccgga 106 |||||||||||||||||||| Sbjct: 7468993 ccgcgccgcgccgcgccgga 7468974
>gb|AC096310.9| Rattus norvegicus 1 BAC CH230-121B19 (Children's Hospital Oakland Research Institute) complete sequence Length = 218258 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 368 gtttggtttggttttgtctggt 389 |||||||||||||||||||||| Sbjct: 50246 gtttggtttggttttgtctggt 50267
>gb|AC118668.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0036G02, from chromosome 3, complete sequence Length = 153308 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 422 aaaatgtgggtggcggagcggg 443 |||||||||||||||||||||| Sbjct: 76815 aaaatgtgggtggcggagcggg 76794
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 422 aaaatgtgggtggcggagcggg 443 |||||||||||||||||||||| Sbjct: 10519103 aaaatgtgggtggcggagcggg 10519082 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 87 ccgcgccgcgccgcgccgga 106 |||||||||||||||||||| Sbjct: 7466828 ccgcgccgcgccgcgccgga 7466809
>gb|AC099627.10| Mus musculus chromosome 7, clone RP24-69E5, complete sequence Length = 244051 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 366 ttgtttggtttggttttgtctg 387 |||||||||||||||||||||| Sbjct: 160132 ttgtttggtttggttttgtctg 160111
>dbj|AK109538.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-119-D08, full insert sequence Length = 2492 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 422 aaaatgtgggtggcggagcggg 443 |||||||||||||||||||||| Sbjct: 1321 aaaatgtgggtggcggagcggg 1300
>ref|XM_529291.1| PREDICTED: Pan troglodytes LOC450299 (LOC450299), mRNA Length = 1194 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 87 ccgcgccgcgccgcgccggat 107 ||||||||||||||||||||| Sbjct: 1014 ccgcgccgcgccgcgccggat 1034
>gb|AY380559.1| Burkholderia cepacia genomovar I MBP gene, partial cds; putative regulatory proteins and putative asparagine synthetase genes, complete cds; and unknown gene Length = 6299 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 396 tccgggccagggaagggatcg 416 ||||||||||||||||||||| Sbjct: 6098 tccgggccagggaagggatcg 6118
>gb|BC010351.1| Homo sapiens USP6 N-terminal like, mRNA (cDNA clone IMAGE:4047207), partial cds Length = 1855 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 87 ccgcgccgcgccgcgccggat 107 ||||||||||||||||||||| Sbjct: 137 ccgcgccgcgccgcgccggat 157
>gb|AC112261.4| Mus musculus BAC clone RP23-204O17 from 3, complete sequence Length = 186290 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 366 ttgtttggtttggttttgtctggtg 390 ||||||||||||||||||| ||||| Sbjct: 104216 ttgtttggtttggttttgtttggtg 104192
>emb|CR759789.8| Zebrafish DNA sequence from clone CH211-153M1, complete sequence Length = 165831 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 369 tttggtttggttttgtctggt 389 ||||||||||||||||||||| Sbjct: 101060 tttggtttggttttgtctggt 101040
>gb|BC037281.1| Homo sapiens hypothetical LOC439951 protein, mRNA (cDNA clone MGC:33041 IMAGE:4838780), complete cds Length = 946 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 87 ccgcgccgcgccgcgccggat 107 ||||||||||||||||||||| Sbjct: 236 ccgcgccgcgccgcgccggat 216
>gb|BC042943.2| Homo sapiens USP6 N-terminal like, transcript variant 4, mRNA (cDNA clone MGC:41831 IMAGE:5296060), complete cds Length = 3158 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 87 ccgcgccgcgccgcgccggat 107 ||||||||||||||||||||| Sbjct: 97 ccgcgccgcgccgcgccggat 117
>emb|AL512631.11| Human DNA sequence from clone RP11-138I18 on chromosome 10 Contains the 5' end of the gene for a protein related to the N terminus of tre (RNTRE) (KIAA0019) and a CpG island, complete sequence Length = 142863 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 87 ccgcgccgcgccgcgccggat 107 ||||||||||||||||||||| Sbjct: 29181 ccgcgccgcgccgcgccggat 29161
>emb|BX640452.1| Bordetella bronchiseptica strain RB50, complete genome; segment 16/16 Length = 123385 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 85 atccgcgccgcgccgcgccgg 105 ||||||||||||||||||||| Sbjct: 88460 atccgcgccgcgccgcgccgg 88440
>gb|AF449447.1| Mus musculus C3H chromosome 3 hyplip1 region Length = 176641 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 366 ttgtttggtttggttttgtctggtg 390 ||||||||||||||||||| ||||| Sbjct: 150512 ttgtttggtttggttttgtttggtg 150536
>ref|XR_000639.1| PREDICTED: Homo sapiens hypothetical LOC439951 protein (LOC439951), misc RNA Length = 918 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 87 ccgcgccgcgccgcgccggat 107 ||||||||||||||||||||| Sbjct: 228 ccgcgccgcgccgcgccggat 208
>ref|XM_943796.1| PREDICTED: Homo sapiens USP6 N-terminal like, transcript variant 5 (USP6NL), mRNA Length = 896 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 87 ccgcgccgcgccgcgccggat 107 ||||||||||||||||||||| Sbjct: 129 ccgcgccgcgccgcgccggat 149
>ref|XM_938665.1| PREDICTED: Homo sapiens USP6 N-terminal like, transcript variant 4 (USP6NL), mRNA Length = 4712 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 87 ccgcgccgcgccgcgccggat 107 ||||||||||||||||||||| Sbjct: 129 ccgcgccgcgccgcgccggat 149
>ref|XR_000556.1| PREDICTED: Homo sapiens hypothetical LOC439951 protein (LOC439951), misc RNA Length = 918 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 87 ccgcgccgcgccgcgccggat 107 ||||||||||||||||||||| Sbjct: 228 ccgcgccgcgccgcgccggat 208
>ref|XM_932055.1| PREDICTED: Homo sapiens USP6 N-terminal like, transcript variant 3 (USP6NL), mRNA Length = 896 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 87 ccgcgccgcgccgcgccggat 107 ||||||||||||||||||||| Sbjct: 129 ccgcgccgcgccgcgccggat 149
>ref|XM_927409.1| PREDICTED: Homo sapiens USP6 N-terminal like, transcript variant 2 (USP6NL), mRNA Length = 4712 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 87 ccgcgccgcgccgcgccggat 107 ||||||||||||||||||||| Sbjct: 129 ccgcgccgcgccgcgccggat 149
>gb|AC154180.2| Mus musculus BAC clone RP24-469E6 from chromosome 14, complete sequence Length = 187810 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 366 ttgtttggtttggttttgtct 386 ||||||||||||||||||||| Sbjct: 22516 ttgtttggtttggttttgtct 22536
>gb|AC003065.2| Homo sapiens Chromosome 2p13 BAC Clone h173, complete sequence Length = 90831 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 366 ttgtttggtttggttttgtct 386 ||||||||||||||||||||| Sbjct: 83247 ttgtttggtttggttttgtct 83267
>gb|AC006544.19| Homo sapiens chromosome 2 clone bac91a19 map 2p13, complete sequence Length = 234523 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 366 ttgtttggtttggttttgtct 386 ||||||||||||||||||||| Sbjct: 43930 ttgtttggtttggttttgtct 43910
>gb|AC005033.1| Homo sapiens BAC clone RP11-140K4 from 2, complete sequence Length = 113843 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 366 ttgtttggtttggttttgtct 386 ||||||||||||||||||||| Sbjct: 87188 ttgtttggtttggttttgtct 87208
>dbj|D13644.1| Homo sapiens mRNA for KIAA0019 protein, partial cds Length = 4602 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 87 ccgcgccgcgccgcgccggat 107 ||||||||||||||||||||| Sbjct: 108 ccgcgccgcgccgcgccggat 128
>gb|AC005968.1|AC005968 Homo sapiens chromosome 18, clone hRPK.24_A_23, complete sequence Length = 145603 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 366 ttgtttggtttggttttgtct 386 ||||||||||||||||||||| Sbjct: 21600 ttgtttggtttggttttgtct 21620
>emb|AL591417.9| Mouse DNA sequence from clone RP23-272C1 on chromosome 11, complete sequence Length = 131385 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 366 ttgtttggtttggttttgtct 386 ||||||||||||||||||||| Sbjct: 115920 ttgtttggtttggttttgtct 115900
>gb|AC147437.2| Gallus gallus BAC clone CH261-80L21 from chromosome unknown, complete sequence Length = 221338 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 369 tttggtttggttttgtctggtgttc 393 |||||||||||||||| |||||||| Sbjct: 205687 tttggtttggttttgtttggtgttc 205711
>emb|AL772261.5| Mouse DNA sequence from clone RP23-276J11 on chromosome 4, complete sequence Length = 191041 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 365 attgtttggtttggttttgtctggt 389 ||||||||||||||||| ||||||| Sbjct: 159311 attgtttggtttggtttggtctggt 159335
>emb|AL352955.7|CNS05TBU Human chromosome 14 DNA sequence BAC R-1141N12 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 158099 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 366 ttgtttggtttggttttgtct 386 ||||||||||||||||||||| Sbjct: 133408 ttgtttggtttggttttgtct 133428
>emb|AL731554.13| Mouse DNA sequence from clone RP23-337H1 on chromosome 5, complete sequence Length = 159200 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 366 ttgtttggtttggttttgtct 386 ||||||||||||||||||||| Sbjct: 120925 ttgtttggtttggttttgtct 120905
>gb|AC153501.2| Mus musculus 10 BAC RP23-79J15 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 251631 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 366 ttgtttggtttggttttgtctggt 389 ||||||||||||||||||| |||| Sbjct: 7944 ttgtttggtttggttttgtttggt 7921
>gb|AC165972.4| Mus musculus BAC clone RP23-87D12 from chromosome 17, complete sequence Length = 199737 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 56 ggccttcttcctcctccccc 75 |||||||||||||||||||| Sbjct: 42626 ggccttcttcctcctccccc 42607
>gb|AC145600.6| Mus musculus BAC clone RP24-220P24 from chromosome y, complete sequence Length = 171542 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 366 ttgtttggtttggttttgtctggt 389 ||||||||||||||||||| |||| Sbjct: 108244 ttgtttggtttggttttgtttggt 108267
>ref|NM_191276.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 822 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 85 atccgcgccgcgccgcgccg 104 |||||||||||||||||||| Sbjct: 362 atccgcgccgcgccgcgccg 381
>gb|AC125377.5| Mus musculus BAC clone RP23-27C10 from chromosome 1, complete sequence Length = 227511 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 366 ttgtttggtttggttttgtctggt 389 ||||||||||||||||||| |||| Sbjct: 85035 ttgtttggtttggttttgtttggt 85012
>gb|AC159249.3| Mus musculus BAC clone RP24-177C7 from chromosome y, complete sequence Length = 146406 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 366 ttgtttggtttggttttgtctggt 389 ||||||||||||||||||| |||| Sbjct: 97519 ttgtttggtttggttttgtttggt 97496 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 366 ttgtttggtttggttttgtctggt 389 ||||||||||||||||||| |||| Sbjct: 23059 ttgtttggtttggttttgtttggt 23036
>gb|AC150658.7| Mus musculus BAC clone RP24-474E20 from chromosome y, complete sequence Length = 204836 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 366 ttgtttggtttggttttgtctggt 389 ||||||||||||||||||| |||| Sbjct: 186744 ttgtttggtttggttttgtttggt 186767
>ref|XM_430102.1| PREDICTED: Gallus gallus hypothetical gene supported by CR387144 (LOC423855), mRNA Length = 4075 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 83 gaatccgcgccgcgccgcgc 102 |||||||||||||||||||| Sbjct: 1457 gaatccgcgccgcgccgcgc 1476
>gb|AC145587.4| Mus musculus BAC clone RP24-343E24 from chromosome Y, complete sequence Length = 160323 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 366 ttgtttggtttggttttgtctggt 389 ||||||||||||||||||| |||| Sbjct: 41899 ttgtttggtttggttttgtttggt 41876
>gb|AC147260.3| Mus musculus BAC clone RP24-186L11 from chromosome Y, complete sequence Length = 137361 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 366 ttgtttggtttggttttgtctggt 389 ||||||||||||||||||| |||| Sbjct: 27070 ttgtttggtttggttttgtttggt 27093
>gb|AC148824.5| Pan troglodytes BAC clone CH251-507H8 from chromosome 7, complete sequence Length = 189932 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 368 gtttggtttggttttgtctg 387 |||||||||||||||||||| Sbjct: 177701 gtttggtttggttttgtctg 177720
>gb|AC107671.7| Mus musculus chromosome 7, clone RP23-112C18, complete sequence Length = 202894 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 366 ttgtttggtttggttttgtctggt 389 ||||||||||||||||||| |||| Sbjct: 184087 ttgtttggtttggttttgtttggt 184110
>gb|AC140341.5| Mus musculus BAC clone RP24-261P21 from chromosome Y, complete sequence Length = 167722 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 366 ttgtttggtttggttttgtctggt 389 ||||||||||||||||||| |||| Sbjct: 96218 ttgtttggtttggttttgtttggt 96195
>gb|AY592165.1| Uncultured bacterium clone Kazan-2B-44/BC19-2B-44 16S ribosomal RNA gene, partial sequence Length = 1038 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 50 cccaaaggccttcttcctcc 69 |||||||||||||||||||| Sbjct: 360 cccaaaggccttcttcctcc 341
>gb|AY592154.1| Uncultured bacterium clone Kazan-2B-30/BC19-2B-30 16S ribosomal RNA gene, partial sequence Length = 1232 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 50 cccaaaggccttcttcctcc 69 |||||||||||||||||||| Sbjct: 308 cccaaaggccttcttcctcc 289
>gb|AC134565.5| Mus musculus BAC clone RP24-185F21 from chromosome Y, complete sequence Length = 185195 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 366 ttgtttggtttggttttgtctggt 389 ||||||||||||||||||| |||| Sbjct: 19419 ttgtttggtttggttttgtttggt 19442
>gb|AC146687.1| Mus musculus BAC clone RP24-487N17 from chromosome Y, complete sequence Length = 162474 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 366 ttgtttggtttggttttgtctggt 389 ||||||||||||||||||| |||| Sbjct: 22612 ttgtttggtttggttttgtttggt 22635
>gb|AC147625.3| Mus musculus BAC clone RP24-348P17 from chromosome Y, complete sequence Length = 176911 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 366 ttgtttggtttggttttgtctggt 389 ||||||||||||||||||| |||| Sbjct: 59098 ttgtttggtttggttttgtttggt 59075
>gb|AC148322.2| Mus musculus BAC clone RP24-467F9 from chromosome Y, complete sequence Length = 140999 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 366 ttgtttggtttggttttgtctggt 389 ||||||||||||||||||| |||| Sbjct: 139151 ttgtttggtttggttttgtttggt 139128
>gb|AC131763.4| Mus musculus BAC clone RP24-231M1 from chromosome Y, complete sequence Length = 152276 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 366 ttgtttggtttggttttgtctggt 389 ||||||||||||||||||| |||| Sbjct: 90853 ttgtttggtttggttttgtttggt 90876
>gb|AC127572.3| Mus musculus BAC clone RP24-231A11 from chromosome Y, complete sequence Length = 134145 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 366 ttgtttggtttggttttgtctggt 389 ||||||||||||||||||| |||| Sbjct: 108069 ttgtttggtttggttttgtttggt 108046
>gb|CP000359.1| Deinococcus geothermalis DSM 11300, complete genome Length = 2467205 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 87 ccgcgccgcgccgcgccgga 106 |||||||||||||||||||| Sbjct: 189299 ccgcgccgcgccgcgccgga 189280
>gb|AC147105.2| Mus musculus BAC clone RP24-66E5 from chromosome Y, complete sequence Length = 223344 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 366 ttgtttggtttggttttgtctggt 389 ||||||||||||||||||| |||| Sbjct: 146888 ttgtttggtttggttttgtttggt 146865
>gb|AC147111.2| Mus musculus BAC clone RP24-111K19 from chromosome Y, complete sequence Length = 181226 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 366 ttgtttggtttggttttgtctggt 389 ||||||||||||||||||| |||| Sbjct: 95989 ttgtttggtttggttttgtttggt 95966
>gb|AC140401.4| Mus musculus BAC clone RP24-89O8 from chromosome Y, complete sequence Length = 244637 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 366 ttgtttggtttggttttgtctggt 389 ||||||||||||||||||| |||| Sbjct: 17961 ttgtttggtttggttttgtttggt 17984
>gb|AC145569.3| Mus musculus BAC clone RP24-89N16 from chromosome Y, complete sequence Length = 204741 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 366 ttgtttggtttggttttgtctggt 389 ||||||||||||||||||| |||| Sbjct: 118842 ttgtttggtttggttttgtttggt 118865
>gb|AC145602.3| Mus musculus BAC clone RP24-240M7 from chromosome Y, complete sequence Length = 160337 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 366 ttgtttggtttggttttgtctggt 389 ||||||||||||||||||| |||| Sbjct: 151047 ttgtttggtttggttttgtttggt 151070
>gb|AC146597.3| Mus musculus BAC clone RP24-230I13 from chromosome Y, complete sequence Length = 181426 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 366 ttgtttggtttggttttgtctggt 389 ||||||||||||||||||| |||| Sbjct: 95367 ttgtttggtttggttttgtttggt 95344
>gb|AC144651.2| Mus musculus BAC clone RP24-251O18 from chromosome Y, complete sequence Length = 144831 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 366 ttgtttggtttggttttgtctggt 389 ||||||||||||||||||| |||| Sbjct: 144268 ttgtttggtttggttttgtttggt 144245 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 366 ttgtttggtttggttttgtctggt 389 ||||||||||||||||||| |||| Sbjct: 45635 ttgtttggtttggttttgtttggt 45612
>gb|AC145577.2| Mus musculus BAC clone RP24-382J15 from chromosome Y, complete sequence Length = 223903 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 366 ttgtttggtttggttttgtctggt 389 ||||||||||||||||||| |||| Sbjct: 204580 ttgtttggtttggttttgtttggt 204603
>gb|AC148325.2| Mus musculus BAC clone RP24-407P18 from chromosome Y, complete sequence Length = 133083 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 366 ttgtttggtttggttttgtctggt 389 ||||||||||||||||||| |||| Sbjct: 123069 ttgtttggtttggttttgtttggt 123046
>gb|AC146633.2| Mus musculus BAC clone RP24-483C21 from chromosome Y, complete sequence Length = 172652 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 366 ttgtttggtttggttttgtctggt 389 ||||||||||||||||||| |||| Sbjct: 62981 ttgtttggtttggttttgtttggt 62958
>gb|AC183975.1| Mus musculus BAC clone RP24-352C21 from chromosome y, complete sequence Length = 129948 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 366 ttgtttggtttggttttgtctggt 389 ||||||||||||||||||| |||| Sbjct: 72701 ttgtttggtttggttttgtttggt 72678
>gb|AC175673.2| Mus musculus BAC clone RP24-26I10 from chromosome y, complete sequence Length = 203739 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 366 ttgtttggtttggttttgtctggt 389 ||||||||||||||||||| |||| Sbjct: 8975 ttgtttggtttggttttgtttggt 8952
>gb|AC183662.2| Mus musculus BAC clone RP24-452J21 from chromosome y, complete sequence Length = 157980 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 366 ttgtttggtttggttttgtctggt 389 ||||||||||||||||||| |||| Sbjct: 9089 ttgtttggtttggttttgtttggt 9112
>gb|AF289252.1| Phacus skujai 16S ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 1386 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 50 cccaaaggccttcttcctcc 69 |||||||||||||||||||| Sbjct: 350 cccaaaggccttcttcctcc 331
>gb|AC098683.18| Mus musculus strain 129/Sv clone ct7-128f23 map 5, complete sequence Length = 112727 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 87 ccgcgccgcgccgcgccgga 106 |||||||||||||||||||| Sbjct: 92657 ccgcgccgcgccgcgccgga 92638
>gb|AC165946.4| Mus musculus chromosome 1, clone RP24-167M10, complete sequence Length = 157434 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 366 ttgtttggtttggttttgtctggt 389 ||||||||||||||||||| |||| Sbjct: 3226 ttgtttggtttggttttgtttggt 3203
>ref|XM_975152.1| PREDICTED: Mus musculus fibronectin type III domain containing 1 (Fndc1), mRNA Length = 6002 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 ggccttcttcctcctccccc 75 |||||||||||||||||||| Sbjct: 3287 ggccttcttcctcctccccc 3306
>gb|AC182424.4| Mus musculus BAC clone RP24-364J10 from chromosome y, complete sequence Length = 153116 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 366 ttgtttggtttggttttgtctggt 389 ||||||||||||||||||| |||| Sbjct: 34016 ttgtttggtttggttttgtttggt 33993
>gb|AC175390.2| Mus musculus BAC clone RP24-108F5 from chromosome y, complete sequence Length = 179677 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 366 ttgtttggtttggttttgtctggt 389 ||||||||||||||||||| |||| Sbjct: 148679 ttgtttggtttggttttgtttggt 148656
>gb|AC182456.2| Mus musculus BAC clone RP24-65H21 from chromosome y, complete sequence Length = 194102 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 366 ttgtttggtttggttttgtctggt 389 ||||||||||||||||||| |||| Sbjct: 92473 ttgtttggtttggttttgtttggt 92450
>ref|XM_974498.1| PREDICTED: Mus musculus fibronectin type III domain containing 1, transcript variant 2 (Fndc1), mRNA Length = 5851 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 ggccttcttcctcctccccc 75 |||||||||||||||||||| Sbjct: 3131 ggccttcttcctcctccccc 3150
>ref|XM_909373.2| PREDICTED: Mus musculus fibronectin type III domain containing 1, transcript variant 1 (Fndc1), mRNA Length = 6007 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 ggccttcttcctcctccccc 75 |||||||||||||||||||| Sbjct: 3287 ggccttcttcctcctccccc 3306
>ref|XM_985863.1| PREDICTED: Mus musculus fibronectin type III domain containing 1 (Fndc1), mRNA Length = 5846 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 ggccttcttcctcctccccc 75 |||||||||||||||||||| Sbjct: 3131 ggccttcttcctcctccccc 3150
>gb|AC140920.4| Mus musculus BAC clone RP24-498A2 from chromosome Y, complete sequence Length = 164438 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 366 ttgtttggtttggttttgtctggt 389 ||||||||||||||||||| |||| Sbjct: 95359 ttgtttggtttggttttgtttggt 95336
>gb|AC140435.3| Mus musculus BAC clone RP24-172H21 from chromosome Y, complete sequence Length = 191085 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 366 ttgtttggtttggttttgtctggt 389 ||||||||||||||||||| |||| Sbjct: 160545 ttgtttggtttggttttgtttggt 160522
>ref|XM_974604.1| PREDICTED: Mus musculus hypothetical protein LOC669355 (LOC669355), mRNA Length = 699 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 87 ccgcgccgcgccgcgccgga 106 |||||||||||||||||||| Sbjct: 484 ccgcgccgcgccgcgccgga 503
>ref|XM_903780.2| PREDICTED: Mus musculus hypothetical LOC384261 (LOC384261), mRNA Length = 2479 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 87 ccgcgccgcgccgcgccgga 106 |||||||||||||||||||| Sbjct: 715 ccgcgccgcgccgcgccgga 696
>ref|XM_986220.1| PREDICTED: Mus musculus hypothetical LOC384261 (LOC384261), mRNA Length = 2441 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 87 ccgcgccgcgccgcgccgga 106 |||||||||||||||||||| Sbjct: 675 ccgcgccgcgccgcgccgga 656
>ref|XM_990038.1| PREDICTED: Mus musculus hypothetical protein LOC667349 (LOC667349), mRNA Length = 1095 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 87 ccgcgccgcgccgcgccgga 106 |||||||||||||||||||| Sbjct: 444 ccgcgccgcgccgcgccgga 425
>gb|AC129191.4| Mus musculus BAC clone RP24-81F10 from chromosome Y, complete sequence Length = 241616 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 366 ttgtttggtttggttttgtctggt 389 ||||||||||||||||||| |||| Sbjct: 104614 ttgtttggtttggttttgtttggt 104637 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 366 ttgtttggtttggttttgtctggt 389 ||||||||||||||||||| |||| Sbjct: 13977 ttgtttggtttggttttgtttggt 14000
>gb|AC140382.3| Mus musculus BAC clone RP24-86A10 from chromosome Y, complete sequence Length = 193056 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 366 ttgtttggtttggttttgtctggt 389 ||||||||||||||||||| |||| Sbjct: 152718 ttgtttggtttggttttgtttggt 152695
>gb|AC147709.1| Mus musculus BAC clone RP24-97E15 from chromosome Y, complete sequence Length = 197983 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 366 ttgtttggtttggttttgtctggt 389 ||||||||||||||||||| |||| Sbjct: 157378 ttgtttggtttggttttgtttggt 157355
>gb|AC130833.3| Mus musculus BAC clone RP24-91H16 from chromosome Y, complete sequence Length = 208378 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 366 ttgtttggtttggttttgtctggt 389 ||||||||||||||||||| |||| Sbjct: 207052 ttgtttggtttggttttgtttggt 207029
>gb|AC134852.4| Mus musculus BAC clone RP24-248B6 from chromosome Y, complete sequence Length = 186637 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 366 ttgtttggtttggttttgtctggt 389 ||||||||||||||||||| |||| Sbjct: 119688 ttgtttggtttggttttgtttggt 119711
>gb|AC144646.3| Mus musculus BAC clone RP24-388P5 from chromosome Y, complete sequence Length = 151248 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 366 ttgtttggtttggttttgtctggt 389 ||||||||||||||||||| |||| Sbjct: 143456 ttgtttggtttggttttgtttggt 143479 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 366 ttgtttggtttggttttgtctggt 389 ||||||||||||||||||| |||| Sbjct: 49034 ttgtttggtttggttttgtttggt 49011
>gb|AC135808.4| Mus musculus BAC clone RP24-316N5 from chromosome Y, complete sequence Length = 149744 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 366 ttgtttggtttggttttgtctggt 389 ||||||||||||||||||| |||| Sbjct: 148818 ttgtttggtttggttttgtttggt 148795
>emb|CR847978.17| Zebrafish DNA sequence from clone CH211-209D14 in linkage group 3, complete sequence Length = 194437 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 366 ttgtttggtttggttttgtctggt 389 ||||||||||||||||||| |||| Sbjct: 181213 ttgtttggtttggttttgtatggt 181190
>ref|XM_448325.1| Candida glabrata CBS138, CAGL0K02299g partial mRNA Length = 1617 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 206 gcgcactcccactcccactc 225 |||||||||||||||||||| Sbjct: 178 gcgcactcccactcccactc 159
>gb|AC136136.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0071C04, from chromosome 3, complete sequence Length = 126078 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 87 ccgcgccgcgccgcgccgga 106 |||||||||||||||||||| Sbjct: 107548 ccgcgccgcgccgcgccgga 107529
>gb|AC117596.6| Mus musculus chromosome 6, clone RP23-392K24, complete sequence Length = 233811 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 87 ccgcgccgcgccgcgccgga 106 |||||||||||||||||||| Sbjct: 232236 ccgcgccgcgccgcgccgga 232217
>gb|AC104073.3| Homo sapiens BAC clone RP11-328P23 from 7, complete sequence Length = 178670 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 368 gtttggtttggttttgtctg 387 |||||||||||||||||||| Sbjct: 84463 gtttggtttggttttgtctg 84482
>gb|AC119803.10| Mus musculus chromosome 6, clone RP23-124H21, complete sequence Length = 197762 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 366 ttgtttggtttggttttgtctggt 389 ||||||||||||||||||| |||| Sbjct: 19344 ttgtttggtttggttttgtttggt 19321
>gb|AC151532.3| Mus musculus BAC clone RP24-279A12 from chromosome y, complete sequence Length = 158231 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 366 ttgtttggtttggttttgtctggt 389 ||||||||||||||||||| |||| Sbjct: 22671 ttgtttggtttggttttgtttggt 22694
>gb|DQ150676.1| Uncultured bacterium isolate DGGE band SS14 16S ribosomal RNA gene, partial sequence Length = 184 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 50 cccaaaggccttcttcctcc 69 |||||||||||||||||||| Sbjct: 85 cccaaaggccttcttcctcc 66
>gb|AC184149.2| Mus musculus BAC clone RP24-143K6 from chromosome y, complete sequence Length = 150268 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 366 ttgtttggtttggttttgtctggt 389 ||||||||||||||||||| |||| Sbjct: 126708 ttgtttggtttggttttgtttggt 126685
>gb|AC175492.4| Mus musculus BAC clone RP24-76P21 from chromosome y, complete sequence Length = 203854 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 366 ttgtttggtttggttttgtctggt 389 ||||||||||||||||||| |||| Sbjct: 173675 ttgtttggtttggttttgtttggt 173652
>gb|AY626058.1| Phacus granum strain AICB 349 16S small subunit ribosomal RNA gene, partial sequence; chloroplast Length = 1386 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 50 cccaaaggccttcttcctcc 69 |||||||||||||||||||| Sbjct: 349 cccaaaggccttcttcctcc 330
>emb|AL138769.7| Human DNA sequence from clone RP1-33E13 on chromosome 10 Contains a novel gene, complete sequence Length = 100499 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 366 ttgtttggtttggttttgtc 385 |||||||||||||||||||| Sbjct: 60004 ttgtttggtttggttttgtc 59985
>emb|AL050335.32|HSJ190J20 Human DNA sequence from clone RP1-190J20 on chromosome 6p22.3-24.1 Contains the 5' end of a novel gene and a ribosomal protein L6 (RPL6) (TAXREB107) pseudogene, complete sequence Length = 189317 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 54 aaggccttcttcctcctccc 73 |||||||||||||||||||| Sbjct: 73811 aaggccttcttcctcctccc 73792
>gb|AC139014.14| Homo sapiens X BAC RP13-406D21 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 56205 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 365 attgtttggtttggttttgt 384 |||||||||||||||||||| Sbjct: 20556 attgtttggtttggttttgt 20575
>emb|CR380957.1| Candida glabrata strain CBS138 chromosome K complete sequence Length = 1302002 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 206 gcgcactcccactcccactc 225 |||||||||||||||||||| Sbjct: 206771 gcgcactcccactcccactc 206790
>emb|AL591136.20| Mouse DNA sequence from clone RP23-273P3 on chromosome 11 Contains the 5' end of a novel gene, two novel genes, the Taok1 gene for TAO kinase 1, a eukaryotic translation initiation factor 2 subunit 1 alpha (Eif2s1) pseudogene, a ribosomal protein S2 (Rps2) pseudogene, the Cryba1 gene for crystallin beta A1 and two CpG islands, complete sequence Length = 220230 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 86 tccgcgccgcgccgcgccgg 105 |||||||||||||||||||| Sbjct: 178005 tccgcgccgcgccgcgccgg 178024
>gb|AC182455.3| Mus musculus BAC clone RP24-77P23 from chromosome y, complete sequence Length = 216299 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 366 ttgtttggtttggttttgtctggt 389 ||||||||||||||||||| |||| Sbjct: 34764 ttgtttggtttggttttgtttggt 34787
>gb|AC177804.3| Mus musculus BAC clone RP24-223C7 from chromosome y, complete sequence Length = 160566 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 366 ttgtttggtttggttttgtctggt 389 ||||||||||||||||||| |||| Sbjct: 62747 ttgtttggtttggttttgtttggt 62770
>gb|AC153982.8| Mus musculus 6 BAC RP24-280G3 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 163461 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 366 ttgtttggtttggttttgtctggt 389 ||||||||||||||||||| |||| Sbjct: 36198 ttgtttggtttggttttgtttggt 36175
>gb|AC160113.2| Mus musculus BAC clone RP24-84O12 from chromosome 9, complete sequence Length = 223852 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 365 attgtttggtttggttttgt 384 |||||||||||||||||||| Sbjct: 164304 attgtttggtttggttttgt 164323
>gb|AC161165.5| Mus musculus chromosome 15, clone RP23-278C10, complete sequence Length = 176135 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 366 ttgtttggtttggttttgtc 385 |||||||||||||||||||| Sbjct: 132764 ttgtttggtttggttttgtc 132783
>emb|BX470185.18| Zebrafish DNA sequence from clone CH211-222D3 in linkage group 3, complete sequence Length = 198900 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 366 ttgtttggtttggttttgtctggt 389 ||||||||||||||||||| |||| Sbjct: 132353 ttgtttggtttggttttgtatggt 132376
>gb|AC184107.1| Mus musculus chromosome UNK clone CH33-213P12, complete sequence Length = 185346 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 366 ttgtttggtttggttttgtctggt 389 ||||||||||||||||||| |||| Sbjct: 35412 ttgtttggtttggttttgtttggt 35389
>emb|AJ621385.1| Gallus gallus RAD50 gene (partial), IL5 gene, IRF1 gene, OCTN2 gene and OCTN1 gene (partial) Length = 113629 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 87 ccgcgccgcgccgcgccggattga 110 ||||||||||||||||||| |||| Sbjct: 97247 ccgcgccgcgccgcgccgggttga 97224
>gb|AC164163.2| Mus musculus BAC clone RP23-243L21 from chromosome 16, complete sequence Length = 178656 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 370 ttggtttggttttgtctggt 389 |||||||||||||||||||| Sbjct: 121530 ttggtttggttttgtctggt 121511 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 370 ttggtttggttttgtctggt 389 |||||||||||||||||||| Sbjct: 121310 ttggtttggttttgtctggt 121291
>gb|AC142261.5| Mus musculus BAC clone RP24-469C3 from chromosome unknown, complete sequence Length = 179858 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 366 ttgtttggtttggttttgtctggt 389 ||||||||||||||||||| |||| Sbjct: 102689 ttgtttggtttggttttgtttggt 102666 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 366 ttgtttggtttggttttgtctggt 389 ||||||||||||||||||| |||| Sbjct: 27335 ttgtttggtttggttttgtttggt 27312
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome Length = 4940217 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 86 tccgcgccgcgccgcgccgg 105 |||||||||||||||||||| Sbjct: 2633595 tccgcgccgcgccgcgccgg 2633614
>emb|AL935031.12| Zebrafish DNA sequence from clone CH211-93I23, complete sequence Length = 178457 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 366 ttgtttggtttggttttgtc 385 |||||||||||||||||||| Sbjct: 38383 ttgtttggtttggttttgtc 38364
>gb|AE012321.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 229 of 460 of the complete genome Length = 10029 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 87 ccgcgccgcgccgcgccgga 106 |||||||||||||||||||| Sbjct: 9960 ccgcgccgcgccgcgccgga 9979
>gb|AC182366.4| Mus musculus BAC clone RP24-360I14 from chromosome y, complete sequence Length = 154476 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 366 ttgtttggtttggttttgtctggt 389 ||||||||||||||||||| |||| Sbjct: 71518 ttgtttggtttggttttgtttggt 71495 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 366 ttgtttggtttggttttgtctggt 389 ||||||||||||||||||| |||| Sbjct: 53233 ttgtttggtttggttttgtttggt 53210
>gb|AC174806.2| Mus musculus BAC clone RP24-526I8 from chromosome y, complete sequence Length = 155247 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 366 ttgtttggtttggttttgtctggt 389 ||||||||||||||||||| |||| Sbjct: 72585 ttgtttggtttggttttgtttggt 72562
>dbj|AK145287.1| Mus musculus mammary gland RCB-0527 Jyg-MC(B) cDNA, RIKEN full-length enriched library, clone:G930037E09 product:hypothetical protein, full insert sequence Length = 1658 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 87 ccgcgccgcgccgcgccgga 106 |||||||||||||||||||| Sbjct: 252 ccgcgccgcgccgcgccgga 233
>gb|AY533911.1| Uncultured Acidobacteria bacterium clone S.Ionian-G05 16S ribosomal RNA gene, partial sequence Length = 683 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 50 cccaaaggccttcttcctcc 69 |||||||||||||||||||| Sbjct: 383 cccaaaggccttcttcctcc 364
>gb|AC177799.3| Mus musculus BAC clone RP24-374O22 from chromosome y, complete sequence Length = 128487 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 366 ttgtttggtttggttttgtctggt 389 ||||||||||||||||||| |||| Sbjct: 54927 ttgtttggtttggttttgtttggt 54950
>gb|AC177797.3| Mus musculus BAC clone RP24-558G11 from chromosome y, complete sequence Length = 174066 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 366 ttgtttggtttggttttgtctggt 389 ||||||||||||||||||| |||| Sbjct: 31075 ttgtttggtttggttttgtttggt 31098
>dbj|AK156105.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched library, clone:F830008C02 product:unclassifiable, full insert sequence Length = 3383 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 366 ttgtttggtttggttttgtctggt 389 ||||||||||||||||||| |||| Sbjct: 60 ttgtttggtttggttttgtttggt 37
>gb|AC159633.2| Mus musculus BAC clone RP24-159L15 from chromosome 12, complete sequence Length = 188757 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 365 attgtttggtttggttttgt 384 |||||||||||||||||||| Sbjct: 98139 attgtttggtttggttttgt 98120
>gb|AC182447.2| Mus musculus BAC clone RP24-476M3 from chromosome y, complete sequence Length = 175402 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 366 ttgtttggtttggttttgtctggt 389 ||||||||||||||||||| |||| Sbjct: 37331 ttgtttggtttggttttgtttggt 37308
>gb|AC174641.3| Mus musculus BAC clone RP24-406C15 from chromosome y, complete sequence Length = 174265 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 366 ttgtttggtttggttttgtctggt 389 ||||||||||||||||||| |||| Sbjct: 112116 ttgtttggtttggttttgtttggt 112093
>gb|AC144648.3| Mus musculus BAC clone RP24-318J19 from chromosome y, complete sequence Length = 162911 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 366 ttgtttggtttggttttgtctggt 389 ||||||||||||||||||| |||| Sbjct: 145243 ttgtttggtttggttttgtttggt 145266
>gb|AC182036.2| Mus musculus BAC clone RP24-120L13 from chromosome y, complete sequence Length = 185554 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 366 ttgtttggtttggttttgtctggt 389 ||||||||||||||||||| |||| Sbjct: 94449 ttgtttggtttggttttgtttggt 94426
>gb|AC175666.3| Mus musculus BAC clone RP24-350M1 from chromosome y, complete sequence Length = 196535 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 366 ttgtttggtttggttttgtctggt 389 ||||||||||||||||||| |||| Sbjct: 53710 ttgtttggtttggttttgtttggt 53733
>gb|AC182446.2| Mus musculus BAC clone RP24-518O14 from chromosome y, complete sequence Length = 155144 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 366 ttgtttggtttggttttgtctggt 389 ||||||||||||||||||| |||| Sbjct: 105517 ttgtttggtttggttttgtttggt 105540
>gb|AC182554.2| Mus musculus BAC clone RP24-307C8 from chromosome y, complete sequence Length = 138532 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 366 ttgtttggtttggttttgtctggt 389 ||||||||||||||||||| |||| Sbjct: 73635 ttgtttggtttggttttgtttggt 73612
>gb|AC163279.6| Mus musculus BAC clone RP24-112D16 from chromosome y, complete sequence Length = 198421 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 366 ttgtttggtttggttttgtctggt 389 ||||||||||||||||||| |||| Sbjct: 18286 ttgtttggtttggttttgtttggt 18309
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 87 ccgcgccgcgccgcgccgga 106 |||||||||||||||||||| Sbjct: 2374616 ccgcgccgcgccgcgccgga 2374597
>gb|AC174234.4| Mus musculus BAC clone RP24-50H9 from chromosome y, complete sequence Length = 200919 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 366 ttgtttggtttggttttgtctggt 389 ||||||||||||||||||| |||| Sbjct: 164573 ttgtttggtttggttttgtttggt 164596
>gb|AC181977.2| Mus musculus BAC clone RP24-346B5 from chromosome y, complete sequence Length = 132660 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 366 ttgtttggtttggttttgtctggt 389 ||||||||||||||||||| |||| Sbjct: 24756 ttgtttggtttggttttgtttggt 24733
>gb|AF266461.1|AF266461 Clostridium stercorarium subsp. leptospartum 16S ribosomal RNA gene, partial sequence Length = 1518 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 50 cccaaaggccttcttcctcc 69 |||||||||||||||||||| Sbjct: 427 cccaaaggccttcttcctcc 408
>gb|AC175663.3| Mus musculus BAC clone RP24-430F7 from chromosome y, complete sequence Length = 144867 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 366 ttgtttggtttggttttgtctggt 389 ||||||||||||||||||| |||| Sbjct: 30472 ttgtttggtttggttttgtttggt 30495
>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome Length = 2909809 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 87 ccgcgccgcgccgcgccgga 106 |||||||||||||||||||| Sbjct: 2202217 ccgcgccgcgccgcgccgga 2202236
>gb|L09176.1|CLORG16SAF Clostridium stercorarium subsp. thermolacticum 16S ribosomal RNA gene, complete sequence Length = 1519 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 50 cccaaaggccttcttcctcc 69 |||||||||||||||||||| Sbjct: 429 cccaaaggccttcttcctcc 410
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 62 cttcctcctcccccaagccg 81 |||||||||||||||||||| Sbjct: 23930158 cttcctcctcccccaagccg 23930139
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 84 aatccgcgccgcgccgcgcc 103 |||||||||||||||||||| Sbjct: 36104517 aatccgcgccgcgccgcgcc 36104498 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 85 atccgcgccgcgccgcgccg 104 |||||||||||||||||||| Sbjct: 31686748 atccgcgccgcgccgcgccg 31686767
>gb|AC130686.15| Homo sapiens chromosome 17, clone RP13-415G19, complete sequence Length = 208462 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 144 ccttcccttggcctccgctc 163 |||||||||||||||||||| Sbjct: 133574 ccttcccttggcctccgctc 133593
>gb|AC019349.28| Homo sapiens chromosome 17, clone RP11-156A24, complete sequence Length = 166320 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 144 ccttcccttggcctccgctc 163 |||||||||||||||||||| Sbjct: 18321 ccttcccttggcctccgctc 18340
>dbj|AB207966.1| Uncultured bacterium gene for 16S rRNA, partial sequence, clone:HS-37 Length = 404 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 50 cccaaaggccttcttcctcc 69 |||||||||||||||||||| Sbjct: 67 cccaaaggccttcttcctcc 48
>dbj|AB207946.1| Uncultured bacterium gene for 16S rRNA, partial sequence, clone:HS-17 Length = 404 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 50 cccaaaggccttcttcctcc 69 |||||||||||||||||||| Sbjct: 67 cccaaaggccttcttcctcc 48
>gb|AC156397.5| Mus musculus 6 BAC RP24-279P24 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 166910 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 46 ctcccccaaaggccttcttc 65 |||||||||||||||||||| Sbjct: 73355 ctcccccaaaggccttcttc 73336
>dbj|AK173167.1| Mus musculus mRNA for mKIAA1413 protein Length = 4767 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 87 ccgcgccgcgccgcgccgga 106 |||||||||||||||||||| Sbjct: 10 ccgcgccgcgccgcgccgga 29
>gb|AC156029.2| Mus musculus BAC clone RP23-42O8 from chromosome 5, complete sequence Length = 235471 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 87 ccgcgccgcgccgcgccgga 106 |||||||||||||||||||| Sbjct: 165999 ccgcgccgcgccgcgccgga 165980
>gb|AC127261.3| Mus musculus BAC clone RP24-316F4 from chromosome unknown, complete sequence Length = 168193 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 366 ttgtttggtttggttttgtctggt 389 ||||||||||||||||||| |||| Sbjct: 136011 ttgtttggtttggttttgtttggt 136034 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 366 ttgtttggtttggttttgtctggt 389 ||||||||||||||||||| |||| Sbjct: 7734 ttgtttggtttggttttgtttggt 7711
>gb|AC008033.9| Homo sapiens 12 BAC RP11-81H14 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 149136 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 369 tttggtttggttttgtctggtgtt 392 ||||||||||||||| |||||||| Sbjct: 39299 tttggtttggttttgcctggtgtt 39322
>gb|BC015079.1| Mus musculus, clone IMAGE:3673398, mRNA Length = 1589 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 366 ttgtttggtttggttttgtctggt 389 ||||||||||||||||||| |||| Sbjct: 629 ttgtttggtttggttttgtttggt 652
>dbj|AP003268.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0503C12 Length = 147180 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 85 atccgcgccgcgccgcgccg 104 |||||||||||||||||||| Sbjct: 100480 atccgcgccgcgccgcgccg 100499
>gb|AC107317.3| Mus musculus strain C57BL6/J chromosome 6 clone RP23-340A17, complete sequence Length = 228371 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 366 ttgtttggtttggttttgtctggt 389 |||||||||||||||| ||||||| Sbjct: 37299 ttgtttggtttggtttggtctggt 37276
>gb|AC174381.2| Mus musculus BAC clone RP24-206F6 from chromosome y, complete sequence Length = 172601 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 366 ttgtttggtttggttttgtctggt 389 ||||||||||||||||||| |||| Sbjct: 79931 ttgtttggtttggttttgtttggt 79954
>gb|AC105208.15| Homo sapiens chromosome 17, clone CTD-3226O14, complete sequence Length = 65233 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 144 ccttcccttggcctccgctc 163 |||||||||||||||||||| Sbjct: 49329 ccttcccttggcctccgctc 49348
>dbj|AP003241.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0408C03 Length = 141273 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 84 aatccgcgccgcgccgcgcc 103 |||||||||||||||||||| Sbjct: 117242 aatccgcgccgcgccgcgcc 117223
>gb|AC142166.6| Mus musculus BAC clone RP24-455G9 from chromosome y, complete sequence Length = 169731 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 366 ttgtttggtttggttttgtctggt 389 ||||||||||||||||||| |||| Sbjct: 147817 ttgtttggtttggttttgtttggt 147794
>gb|AC141474.4| Mus musculus BAC clone RP24-192L11 from chromosome y, complete sequence Length = 178464 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 366 ttgtttggtttggttttgtctggt 389 ||||||||||||||||||| |||| Sbjct: 120129 ttgtttggtttggttttgtttggt 120106
>gb|AC129774.4| Mus musculus BAC clone RP24-167G16 from chromosome y, complete sequence Length = 168396 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 366 ttgtttggtttggttttgtctggt 389 ||||||||||||||||||| |||| Sbjct: 26266 ttgtttggtttggttttgtttggt 26289
>dbj|AP005149.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0005G07 Length = 142850 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 62 cttcctcctcccccaagccg 81 |||||||||||||||||||| Sbjct: 85085 cttcctcctcccccaagccg 85066
>gb|AC121306.12| Mus musculus chromosome 3, clone RP24-100C12, complete sequence Length = 195059 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 366 ttgtttggtttggttttgtctggt 389 ||||||||||||||||||| |||| Sbjct: 148133 ttgtttggtttggttttgtttggt 148110
>gb|AC153371.7| Mus musculus 6 BAC RP23-304H3 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 206412 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 366 ttgtttggtttggttttgtctggt 389 ||||||||||||||||||| |||| Sbjct: 20238 ttgtttggtttggttttgtttggt 20261
>gb|AC153987.4| Mus musculus 6 BAC RP24-430K15 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 133371 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 87 ccgcgccgcgccgcgccgga 106 |||||||||||||||||||| Sbjct: 127973 ccgcgccgcgccgcgccgga 127992
>emb|X72870.1|CT16SRRNA C.thermolacticum gene for 16S rRNA Length = 1517 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 50 cccaaaggccttcttcctcc 69 |||||||||||||||||||| Sbjct: 429 cccaaaggccttcttcctcc 410
>gb|AC155726.4| Mus musculus 6 BAC RP24-180C9 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 187560 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 366 ttgtttggtttggttttgtctggt 389 ||||||||||||||||||| |||| Sbjct: 25047 ttgtttggtttggttttgtttggt 25070
>gb|AC142503.3| Mus musculus BAC clone RP24-269M6 from Y, complete sequence Length = 145946 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 366 ttgtttggtttggttttgtctggt 389 ||||||||||||||||||| |||| Sbjct: 68856 ttgtttggtttggttttgtttggt 68879
>emb|CR381630.12| Zebrafish DNA sequence from clone CH211-234G24 in linkage group 18, complete sequence Length = 152854 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 341 cggcgtcgattcagaggcgt 360 |||||||||||||||||||| Sbjct: 152151 cggcgtcgattcagaggcgt 152170
>gb|AC153991.3| Mus musculus 6 BAC RP24-541D10 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 202289 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 366 ttgtttggtttggttttgtctggt 389 ||||||||||||||||||| |||| Sbjct: 119994 ttgtttggtttggttttgtttggt 120017
>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome Length = 4941439 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 86 tccgcgccgcgccgcgccgg 105 |||||||||||||||||||| Sbjct: 2656440 tccgcgccgcgccgcgccgg 2656459
>emb|AL929241.13| Mouse DNA sequence from clone RP23-4L24 on chromosome 2, complete sequence Length = 168308 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 366 ttgtttggtttggttttgtctggt 389 ||||||||||||||||||| |||| Sbjct: 165744 ttgtttggtttggttttgtttggt 165721 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 366 ttgtttggtttggttttgtctggt 389 ||||||||||||||||||| |||| Sbjct: 165729 ttgtttggtttggttttgtttggt 165706
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 86 tccgcgccgcgccgcgccgg 105 |||||||||||||||||||| Sbjct: 1818205 tccgcgccgcgccgcgccgg 1818224
>emb|CT030235.12| Mouse DNA sequence from clone RP23-240F19 on chromosome 16, complete sequence Length = 236028 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 370 ttggtttggttttgtctggt 389 |||||||||||||||||||| Sbjct: 165253 ttggtttggttttgtctggt 165272 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 370 ttggtttggttttgtctggt 389 |||||||||||||||||||| Sbjct: 165033 ttggtttggttttgtctggt 165052
>gb|AC153584.5| Mus musculus 6 BAC RP23-27C9 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 208921 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 366 ttgtttggtttggttttgtctggt 389 ||||||||||||||||||| |||| Sbjct: 8981 ttgtttggtttggttttgtttggt 9004
>emb|AL928828.6| Zebrafish DNA sequence from clone CH211-30I2, complete sequence Length = 169046 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 366 ttgtttggtttggttttgtc 385 |||||||||||||||||||| Sbjct: 3610 ttgtttggtttggttttgtc 3591
>emb|AL611983.23| Mouse DNA sequence from clone RP23-467J23 on chromosome 4, complete sequence Length = 153955 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 87 ccgcgccgcgccgcgccgga 106 |||||||||||||||||||| Sbjct: 96668 ccgcgccgcgccgcgccgga 96687
>gb|AC145583.3| Mus musculus BAC clone RP24-154F7 from Y, complete sequence Length = 154648 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 366 ttgtttggtttggttttgtctggt 389 ||||||||||||||||||| |||| Sbjct: 132080 ttgtttggtttggttttgtttggt 132103
>gb|AC132374.4| Mus musculus BAC clone RP24-69E21 from 10, complete sequence Length = 188514 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 365 attgtttggtttggttttgt 384 |||||||||||||||||||| Sbjct: 99413 attgtttggtttggttttgt 99432
>gb|AC145597.4| Mus musculus BAC clone RP24-323M2 from Y, complete sequence Length = 199904 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 366 ttgtttggtttggttttgtctggt 389 ||||||||||||||||||| |||| Sbjct: 183429 ttgtttggtttggttttgtttggt 183406
>gb|AC148329.3| Mus musculus BAC clone RP24-176F13 from Y, complete sequence Length = 149159 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 366 ttgtttggtttggttttgtctggt 389 ||||||||||||||||||| |||| Sbjct: 143079 ttgtttggtttggttttgtttggt 143056 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 366 ttgtttggtttggttttgtctggt 389 ||||||||||||||||||| |||| Sbjct: 67700 ttgtttggtttggttttgtttggt 67677
>gb|AC144854.3| Mus musculus BAC clone RP24-216J19 from Y, complete sequence Length = 144593 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 366 ttgtttggtttggttttgtctggt 389 ||||||||||||||||||| |||| Sbjct: 106459 ttgtttggtttggttttgtttggt 106482
>gb|AC140924.4| Mus musculus BAC clone RP24-249B5 from Y, complete sequence Length = 200241 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 366 ttgtttggtttggttttgtctggt 389 ||||||||||||||||||| |||| Sbjct: 91690 ttgtttggtttggttttgtttggt 91667
>gb|AC140296.4| Mus musculus BAC clone RP24-313K7 from Y, complete sequence Length = 149322 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 366 ttgtttggtttggttttgtctggt 389 ||||||||||||||||||| |||| Sbjct: 107844 ttgtttggtttggttttgtttggt 107867
>gb|AC145579.4| Mus musculus BAC clone RP24-371G22 from Y, complete sequence Length = 174048 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 366 ttgtttggtttggttttgtctggt 389 ||||||||||||||||||| |||| Sbjct: 75080 ttgtttggtttggttttgtttggt 75057
>gb|AC147630.4| Mus musculus BAC clone RP24-530L22 from Y, complete sequence Length = 180127 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 366 ttgtttggtttggttttgtctggt 389 ||||||||||||||||||| |||| Sbjct: 90380 ttgtttggtttggttttgtttggt 90357
>gb|AC145555.4| Mus musculus BAC clone RP24-553D15 from chromosome y, complete sequence Length = 181490 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 366 ttgtttggtttggttttgtctggt 389 ||||||||||||||||||| |||| Sbjct: 76998 ttgtttggtttggttttgtttggt 77021
>gb|AC126054.5| Mus musculus BAC clone RP23-298O13 from 8, complete sequence Length = 233117 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 365 attgtttggtttggttttgt 384 |||||||||||||||||||| Sbjct: 73101 attgtttggtttggttttgt 73120
>gb|AC133959.4| Mus musculus BAC clone RP23-377P18 from 15, complete sequence Length = 143812 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 366 ttgtttggtttggttttgtc 385 |||||||||||||||||||| Sbjct: 40994 ttgtttggtttggttttgtc 41013
>gb|U69569.1|HSU69569 Human Xq28 cosmid U21A12, complete sequence Length = 40299 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 365 attgtttggtttggttttgt 384 |||||||||||||||||||| Sbjct: 36685 attgtttggtttggttttgt 36704
>gb|AC156161.3| Mus musculus BAC clone RP24-403M10 from chromosome y, complete sequence Length = 155529 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 366 ttgtttggtttggttttgtctggt 389 ||||||||||||||||||| |||| Sbjct: 83361 ttgtttggtttggttttgtttggt 83384
>emb|AL773530.9| Mouse DNA sequence from clone RP23-180A8 on chromosome 2, complete sequence Length = 188424 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 368 gtttggtttggttttgtctg 387 |||||||||||||||||||| Sbjct: 104786 gtttggtttggttttgtctg 104805
>gb|DQ165108.1| Uncultured bacterium clone 23 16S ribosomal RNA gene, partial sequence Length = 1154 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 50 cccaaaggccttcttcctcc 69 |||||||||||||||||||| Sbjct: 432 cccaaaggccttcttcctcc 413
>gb|DQ165106.1| Uncultured bacterium clone 20 16S ribosomal RNA gene, partial sequence Length = 880 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 50 cccaaaggccttcttcctcc 69 |||||||||||||||||||| Sbjct: 412 cccaaaggccttcttcctcc 393
>emb|AJ310082.1|CST310082 Clostridium stercorarium 16S rRNA gene, strain DSM 8532T Length = 1500 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 50 cccaaaggccttcttcctcc 69 |||||||||||||||||||| Sbjct: 423 cccaaaggccttcttcctcc 404
>gb|AC113282.19| Mus musculus chromosome 1, clone RP23-393I20, complete sequence Length = 183505 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 366 ttgtttggtttggttttgtctggt 389 ||||||||||||||||||| |||| Sbjct: 178084 ttgtttggtttggttttgtttggt 178061
>gb|AC164983.2| Mus musculus BAC clone RP23-16J24 from chromosome 17, complete sequence Length = 224370 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 56 ggccttcttcctcctccccc 75 |||||||||||||||||||| Sbjct: 110718 ggccttcttcctcctccccc 110699
>emb|AL833800.6| Mouse DNA sequence from clone RP23-147P20 on chromosome X, complete sequence Length = 199542 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 58 ccttcttcctcctcccccaa 77 |||||||||||||||||||| Sbjct: 194521 ccttcttcctcctcccccaa 194540
>gb|AC164629.14| Mus musculus 10 BAC RP23-16N3 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 221874 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 366 ttgtttggtttggttttgtctggt 389 ||||||||||||||||||| |||| Sbjct: 190108 ttgtttggtttggttttgtttggt 190085
>gb|L09175.1|CLORG16SAE Clostridium sp. 16S ribosomal RNA (16S rRNA) gene Length = 1517 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 50 cccaaaggccttcttcctcc 69 |||||||||||||||||||| Sbjct: 427 cccaaaggccttcttcctcc 408
>gb|L09174.1|CLORG16SAD Clostridium stercorarium (NCIMB 11754) 16S ribosomal RNA (16S rRNA) gene Length = 1519 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 50 cccaaaggccttcttcctcc 69 |||||||||||||||||||| Sbjct: 427 cccaaaggccttcttcctcc 408
>emb|AL824705.5| Mouse DNA sequence from clone RP23-102G9 on chromosome 4, complete sequence Length = 144458 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 366 ttgtttggtttggttttgtctggt 389 ||||||||||||||||||| |||| Sbjct: 17744 ttgtttggtttggttttgtttggt 17767 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,489,451 Number of Sequences: 3902068 Number of extensions: 3489451 Number of successful extensions: 161303 Number of sequences better than 10.0: 205 Number of HSP's better than 10.0 without gapping: 208 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 159688 Number of HSP's gapped (non-prelim): 1611 length of query: 443 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 421 effective length of database: 17,147,199,772 effective search space: 7218971104012 effective search space used: 7218971104012 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
