ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast78b09
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1APG_ARATH (P40602) Anter-specific proline-rich protein APG precu... 69 9e-12
2APG_BRANA (P40603) Anter-specific proline-rich protein APG (Prot... 65 8e-11
3FUCO2_ARATH (Q9FXE5) Alpha-L-fucosidase 2 precursor (EC 3.2.1.51... 46 6e-05
4EST_HEVBR (Q7Y1X1) Esterase precursor (EC 3.1.1.-) (Early nodule... 44 2e-04
5CAD15_HUMAN (P55291) Muscle-cadherin precursor (M-cadherin) (Cad... 30 2.7
6ESTA_PSEPU (Q6B6R8) Esterase estA precursor (EC 3.1.1.1) 29 7.8
7ESTA_PSEAE (O33407) Esterase estA precursor (EC 3.1.1.1) 29 7.8

>APG_ARATH (P40602) Anter-specific proline-rich protein APG precursor|
          Length = 534

 Score = 68.6 bits (166), Expect = 9e-12
 Identities = 42/147 (28%), Positives = 65/147 (44%)
 Frame = +1

Query: 52  LTSGSIYLVSAGTSDYVQNYYVNAMLAAAYTPDQFADALMQPFTAFVERLYGLGARRIGV 231
           L S  + +V  G++D +  Y+ +         D +   +     +FV +LYG GARRIGV
Sbjct: 340 LISKGVAIVVGGSNDLIITYFGSGAQRLKNDIDSYTTIIADSAASFVLQLYGYGARRIGV 399

Query: 232 TSLPPMGCLPASVTLFXXXXXXXXXXCVERLNNDSLAFNA*LQAASDAAKKRHSDLKLVV 411
              PP+GC+P+               C E LN  S  FN+ L        K   +   V 
Sbjct: 400 IGTPPLGCVPSQ-------RLKKKKICNEELNYASQLFNSKLLLILGQLSKTLPNSTFVY 452

Query: 412 LDIXHPLLNLVADPMTAGFFESRRACC 492
           +DI   +  ++  P   GF E+++ CC
Sbjct: 453 MDIYTIISQMLETPAAYGFEETKKPCC 479



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>APG_BRANA (P40603) Anter-specific proline-rich protein APG (Protein CEX)|
           (Fragment)
          Length = 449

 Score = 65.5 bits (158), Expect = 8e-11
 Identities = 43/147 (29%), Positives = 62/147 (42%)
 Frame = +1

Query: 52  LTSGSIYLVSAGTSDYVQNYYVNAMLAAAYTPDQFADALMQPFTAFVERLYGLGARRIGV 231
           + S    +V AG++D +  Y+ N         D F   +     +FV +LYG GARRIGV
Sbjct: 257 IVSKGAAIVVAGSNDLIYTYFGNGAQHLKNDVDSFTTMMADSAASFVLQLYGYGARRIGV 316

Query: 232 TSLPPMGCLPASVTLFXXXXXXXXXXCVERLNNDSLAFNA*LQAASDAAKKRHSDLKLVV 411
              PP+GC P+               C E LN  +  FN+ L        K   +  +V 
Sbjct: 317 IGTPPIGCTPSQ-------RVKKKKICNEDLNYAAQLFNSKLVIILGQLSKTLPNSTIVY 369

Query: 412 LDIXHPLLNLVADPMTAGFFESRRACC 492
            DI      ++  P   GF E ++ CC
Sbjct: 370 GDIYSIFSKMLESPEDYGFEEIKKPCC 396



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>FUCO2_ARATH (Q9FXE5) Alpha-L-fucosidase 2 precursor (EC 3.2.1.51)|
           (Alpha-L-fucoside fucohydrolase 2)
           (Alpha-1,2-fucosidase) (AtFXG1)
          Length = 372

 Score = 45.8 bits (107), Expect = 6e-05
 Identities = 34/147 (23%), Positives = 57/147 (38%), Gaps = 1/147 (0%)
 Frame = +1

Query: 58  SGSIYLVSAGTSDYVQNYYVNAMLAAAYTPDQFADALMQPFTAFVERLYGLGARRIGVTS 237
           S ++Y    G +D    Y+ N  +    T       ++  F   ++ +YG G R   + +
Sbjct: 162 SKALYTFDIGQNDLTAGYFANKTVEQVETE---VPEIISQFMNAIKNIYGQGGRYFWIHN 218

Query: 238 LPPMGCLPASVTLF-XXXXXXXXXXCVERLNNDSLAFNA*LQAASDAAKKRHSDLKLVVL 414
             P+GCL   +  F           CV  LN+ +  FN  L+ A    +   S+  +  +
Sbjct: 219 TGPIGCLAYVIERFPNKASDFDSHGCVSPLNHLAQQFNHALKQAVIELRSSLSEAAITYV 278

Query: 415 DIXHPLLNLVADPMTAGFFESRRACCG 495
           D+      L       GF  S  +CCG
Sbjct: 279 DVYSLKHELFVHAQGHGFKGSLVSCCG 305



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>EST_HEVBR (Q7Y1X1) Esterase precursor (EC 3.1.1.-) (Early nodule-specific|
           protein homolog) (Latex allergen Hev b 13)
          Length = 391

 Score = 43.9 bits (102), Expect = 2e-04
 Identities = 37/145 (25%), Positives = 60/145 (41%), Gaps = 1/145 (0%)
 Frame = +1

Query: 64  SIYLVSAGTSDYVQNYY-VNAMLAAAYTPDQFADALMQPFTAFVERLYGLGARRIGVTSL 240
           ++Y    G +D  + +  +      A  PD     L+  F+A V+++Y LGAR   + + 
Sbjct: 169 ALYTFDIGQNDLTEGFLNLTVEEVNATVPD-----LVNSFSANVKKIYDLGARTFWIHNT 223

Query: 241 PPMGCLPASVTLFXXXXXXXXXXCVERLNNDSLAFNA*LQAASDAAKKRHSDLKLVVLDI 420
            P+GCL   +T F          C +  N  +  FN  L+      +K       V +DI
Sbjct: 224 GPIGCLSFILTYF-PWAEKDSAGCAKAYNEVAQHFNHKLKEIVAQLRKDLPLATFVHVDI 282

Query: 421 XHPLLNLVADPMTAGFFESRRACCG 495
                +L ++P   GF      CCG
Sbjct: 283 YSVKYSLFSEPEKHGFEFPLITCCG 307



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>CAD15_HUMAN (P55291) Muscle-cadherin precursor (M-cadherin) (Cadherin-15)|
           (Cadherin-14)
          Length = 814

 Score = 30.4 bits (67), Expect = 2.7
 Identities = 14/25 (56%), Positives = 15/25 (60%)
 Frame = -2

Query: 264 RREAPHGRQRRHPDPPCAQPVQPLD 190
           RR+AP GR   HP PP   P  PLD
Sbjct: 688 RRDAPQGRL--HPQPPRVLPTSPLD 710



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>ESTA_PSEPU (Q6B6R8) Esterase estA precursor (EC 3.1.1.1)|
          Length = 646

 Score = 28.9 bits (63), Expect = 7.8
 Identities = 21/68 (30%), Positives = 34/68 (50%)
 Frame = +1

Query: 64  SIYLVSAGTSDYVQNYYVNAMLAAAYTPDQFADALMQPFTAFVERLYGLGARRIGVTSLP 243
           ++Y ++ G +D++Q   +N + A      Q A  L+      V+ L   GAR I V  LP
Sbjct: 162 ALYYITGGGNDFLQGRILNDVQA-----QQAAGRLVDS----VQALQQAGARYIVVWLLP 212

Query: 244 PMGCLPAS 267
            +G  PA+
Sbjct: 213 DLGLTPAT 220



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>ESTA_PSEAE (O33407) Esterase estA precursor (EC 3.1.1.1)|
          Length = 646

 Score = 28.9 bits (63), Expect = 7.8
 Identities = 21/68 (30%), Positives = 34/68 (50%)
 Frame = +1

Query: 64  SIYLVSAGTSDYVQNYYVNAMLAAAYTPDQFADALMQPFTAFVERLYGLGARRIGVTSLP 243
           ++Y ++ G +D++Q   +N + A      Q A  L+      V+ L   GAR I V  LP
Sbjct: 162 ALYYITGGGNDFLQGRILNDVQA-----QQAAGRLVDS----VQALQQAGARYIVVWLLP 212

Query: 244 PMGCLPAS 267
            +G  PA+
Sbjct: 213 DLGLTPAT 220


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 39,469,100
Number of Sequences: 219361
Number of extensions: 549831
Number of successful extensions: 1869
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1815
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1866
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3465624120
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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